prot_P-fluviatile_contig9.15252.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig9.15252.1
Unique Nameprot_P-fluviatile_contig9.15252.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length420
Homology
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BLAST of mRNA_P-fluviatile_contig9.15252.1 vs. uniprot
Match: D7G8H4_ECTSI (WD repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H4_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 5.020e-107
Identity = 185/361 (51.25%), Postives = 215/361 (59.56%), Query Frame = 0 
Query:   16 SIVVRELHNNAAGGSRDPGRGGDISEFTFSGDGGHLVVGSTDLVVRVWNIYSGELELLAPPLAGSNDEGGYHAGHLSCDI-LQNPMRGLLLAAGGTAGGVFVWDVRRRGPGTGSTMVASGGTGPTADLRNNGHEYGISVSHLAAYPDGSFFVSADSSTVKFWSADDFECKRTLRSTFEVEHLMVSAKGVFVFIAGGNSDEGRRTKEKRAVVAVWGGRKRGRIYPGYGGERDPVQLLTGHGGSIRSLYTPDNPDVLVTSALDATVKVWNVPNGTCTKTVWSKGGLHSPLSYAALVNRGAWLLTSHDDNSLQ----VWDARTGRCVMSLTNTAAAAXXXXXXXXXXXXXGVRIARLTVSRSGR 371
            SIVVRE+ + +AGG R    GGDISE  FS DG HL+ G+ +  VR+W   SGE+ELLAPPLAGSN++GGYHAGHLSCDI L +P RG+L+                                                                     FW A DF CKRT+RSTF V+ LMVSA+G FVF+AG            RAVVAVW GRKRG+IYPG+GGERDP +LLTGHG  IRSLYTP NPDVLVT+ALDATVK+W+VP GTCTKT+WSKGGL SPLS A LVN GAWLLTS+DD SLQ    VW  +TG+C+++L N AAAA                 ARL VSR GR
Sbjct:   20 SIVVREIRSPSAGGGR---AGGDISEIAFSADGAHLLTGAKNFAVRIWGTRSGEVELLAPPLAGSNEDGGYHAGHLSCDIVLHHPSRGMLM---------------------------------------------------------------------FWCAKDFTCKRTIRSTFGVKILMVSARGKFVFVAGEQGXXXXXXXXXRAVVAVWDGRKRGKIYPGFGGERDPTRLLTGHGRPIRSLYTPHNPDVLVTTALDATVKIWDVPTGTCTKTIWSKGGLQSPLSNAGLVNHGAWLLTSYDDGSLQTTGQVWIIQTGKCLLTLVNAAAAAAAADGVAVLPRPGA---ARLAVSRCGR 305
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8H4_ECTSI5.020e-10751.25WD repeat-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 51..65
score: 34.19
coord: 269..283
score: 34.38
coord: 314..328
score: 28.62
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 135..177
e-value: 0.88
score: 17.4
coord: 15..64
e-value: 0.35
score: 19.9
coord: 80..118
e-value: 150.0
score: 3.3
coord: 243..282
e-value: 5.5E-5
score: 32.6
coord: 285..327
e-value: 6.5
score: 11.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 245..282
e-value: 8.3E-4
score: 20.1
coord: 146..177
e-value: 0.15
score: 13.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 314..336
score: 9.272
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 32..73
score: 10.341
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 250..291
score: 13.382
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 31..224
e-value: 8.8E-16
score: 59.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 225..384
e-value: 4.1E-18
score: 67.3
NoneNo IPR availablePANTHERPTHR19846WD40 REPEAT PROTEINcoord: 248..384
coord: 40..188
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 269..283
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 314..328
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 32..73
score: 10.021
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 250..336
score: 17.086
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 35..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:2277657..2282055 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15252.1mRNA_P-fluviatile_contig9.15252.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig9 2277413..2282646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig9.15252.1 ID=prot_P-fluviatile_contig9.15252.1|Name=mRNA_P-fluviatile_contig9.15252.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=420bp
MHAKESTERGDPSSPSIVVRELHNNAAGGSRDPGRGGDISEFTFSGDGGH
LVVGSTDLVVRVWNIYSGELELLAPPLAGSNDEGGYHAGHLSCDILQNPM
RGLLLAAGGTAGGVFVWDVRRRGPGTGSTMVASGGTGPTADLRNNGHEYG
ISVSHLAAYPDGSFFVSADSSTVKFWSADDFECKRTLRSTFEVEHLMVSA
KGVFVFIAGGNSDEGRRTKEKRAVVAVWGGRKRGRIYPGYGGERDPVQLL
TGHGGSIRSLYTPDNPDVLVTSALDATVKVWNVPNGTCTKTVWSKGGLHS
PLSYAALVNRGAWLLTSHDDNSLQVWDARTGRCVMSLTNTAAAAPSSSAT
ATGSAGAGVRIARLTVSRSGRLAAFAVGKRLKVLDFDRLADRSAAAGGRP
GQTGSYLRQALRFVTSPLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf