mRNA_P-fluviatile_contig9.15070.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig9.15070.1
Unique NamemRNA_P-fluviatile_contig9.15070.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig9.15070.1 vs. uniprot
Match: A0A6H5KJ99_9PHAE (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJ99_9PHAE)

HSP 1 Score: 355 bits (910), Expect = 1.750e-117
Identity = 196/280 (70.00%), Postives = 222/280 (79.29%), Query Frame = 3 
Query:   99 IMDRFGRLVILCLLFSEGSESFTPGYFSGSGGATSGRT-LGNGGFGAGVSSTRLKHVGW----RRSSSVVVDVDSTSTVESVADLKWRLLRASAGVNRGLSSREAEKEEIEIIVEELERQNPNPTPNDGFADGSSVLTGEWKLIFTSALDVLSLGLIPAVDIGEIYQNINEDGSQITNVVELQPKAAPVLERFAGSTSARLEVLAASSVVGDNRLTLSFRSSQYLPKTLFGRDVSSKFPPLKLNFPEIPGTNAGWVDTTFIDEEIRVGRAFGGNLFVLAR 923
            +M RFGR+    L F  GS+SFT    S    A   R  +  GG G G     L   G+    R SSSV+VDV+STST E V DLK RLLRASAGVNRGLS RE ++EEI  IVEELERQNPNPTPNDGF++G+S+L GEWKLIFTSALDVLSLGLIP V+IG+I+QNINEDG++ITNVV+LQPKAAPVLERFAGSTSARLEV AA+S+ GD RLTLSFR SQY P+TL GRDVS+  PP K++FPEIPGTNAGW+DTTFIDEEIRV RAFGGNLFVLAR
Sbjct:    1 MMKRFGRIATCLLSFKGGSQSFTLRAHSAVRRAPVRRERVDCGGIGGG--GVILNKTGYSARSRLSSSVIVDVESTSTDEPVGDLKARLLRASAGVNRGLSCREGDQEEILEIVEELERQNPNPTPNDGFSEGASILAGEWKLIFTSALDVLSLGLIPGVEIGQIFQNINEDGTEITNVVDLQPKAAPVLERFAGSTSARLEVFAAASLEGDKRLTLSFRRSQYSPQTLLGRDVSATLPPFKVSFPEIPGTNAGWIDTTFIDEEIRVARAFGGNLFVLAR 278
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BLAST of mRNA_P-fluviatile_contig9.15070.1 vs. uniprot
Match: A0A7S2XYK8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYK8_9STRA)

HSP 1 Score: 199 bits (507), Expect = 3.770e-58
Identity = 98/195 (50.26%), Postives = 138/195 (70.77%), Query Frame = 3 
Query:  348 LLRASAGVNRGLSSREAEKEEIEIIVEELERQNPNPTPNDGFADGSSVLTGEWKLIFTSALDVLSLGLIPAVDIGEIYQNINEDGSQITNVVELQPKAAPVLERFAGSTSARLEVLAASSVVGDNRLTLSFRSSQYLPKTLFGRDVSSKF---PPLKLNFPEIPGTNAGWVDTTFIDEEIRVGRAFGGNLFVLAR 923
            L++  +G NRGL++   EK +I  ++E LE  NPNP P DG  DG+S L GEW+L+FT+ALDVLS+G++PAV +G++YQN+N DGS+ITN+++LQP  APVL    GS+ ARL+V A   V    R+ ++F SS+  P+TL GRD++  F   PPLK+ FP       G+VDTT++D+E+RV R+ G NLFVL +
Sbjct:    3 LIKTCSGTNRGLTTTNEEKTKIFDLLERLEELNPNPNPCDGLLDGTSPLEGEWQLLFTNALDVLSVGIVPAVYVGQVYQNVNYDGSEITNIIDLQPGLAPVLNPLIGSSVARLKVRARGKVESSKRIAINFLSSELQPQTLLGRDITGLFSSLPPLKVEFPTQAPQPFGYVDTTYVDDEMRVARSLGENLFVLIK 197
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BLAST of mRNA_P-fluviatile_contig9.15070.1 vs. uniprot
Match: A0A6S9HUA9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HUA9_HETAK)

HSP 1 Score: 195 bits (496), Expect = 2.830e-55
Identity = 98/215 (45.58%), Postives = 145/215 (67.44%), Query Frame = 3 
Query:  282 SSVVVDVDSTS-TVESVADLKWRLLRASAGVNRGLSSREAEKEEIEIIVEELERQNPNPTPNDGFADGSSVLTGEWKLIFTSALDVLSLGLIPAVDIGEIYQNINEDGSQITNVVELQPKAAPVLERFAGSTSARLEVLAASSVVGDNRLTLSFRSSQYLPKTLFGRDVSSKFPPLKLNFPEIPGTNAGWVDTTFIDEEIRVGRAFGGNLFVLAR 923
            ++VVVD  +++ T E  A LK  LL A  G+NRG S+  AE   ++ +VE LE  NPNP P  G   G+S L+G+W+L++T+ALDVL++ L+PAV +G++YQNIN D S+ITNV++LQP AAP+L     ST ARL+V A+  V    R+ + F SS++ P+T  G++VS   P  + +FP++     GW++ T++D+ +RV RA G N+FVL R
Sbjct:   73 AAVVVDTTASAPTAEDRAALKAELLGACLGLNRGFSATAAEARRVQGLVELLEADNPNPMPTQGLEFGTSPLSGDWRLVYTNALDVLTVALVPAVAVGQVYQNINGDASEITNVIDLQPSAAPLLNAAGASTVARLKVKASGKVESGTRVAIKFISSEFSPRTFLGQEVSGLLPAPRFSFPQVANP-IGWIENTYVDDSLRVCRAIGDNVFVLTR 286
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BLAST of mRNA_P-fluviatile_contig9.15070.1 vs. uniprot
Match: A0A6V1M850_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M850_HETAK)

HSP 1 Score: 164 bits (414), Expect = 3.720e-44
Identity = 75/160 (46.88%), Postives = 112/160 (70.00%), Query Frame = 3 
Query:  444 NPNPTPNDGFADGSSVLTGEWKLIFTSALDVLSLGLIPAVDIGEIYQNINEDGSQITNVVELQPKAAPVLERFAGSTSARLEVLAASSVVGDNRLTLSFRSSQYLPKTLFGRDVSSKFPPLKLNFPEIPGTNAGWVDTTFIDEEIRVGRAFGGNLFVLAR 923
            NPNP P  G   G+S L+G+W+L++T+ALDVL++ L+PAV +G++YQNIN D S+ITNV++LQP AAP+L     ST ARL+V A+  V    R+ + F SS++ P+T  G++VS   P  + +FP++     GW++ T++D+ +RV RA G N+FVL R
Sbjct:   56 NPNPMPTQGLEFGTSPLSGDWRLVYTNALDVLTVALVPAVAVGQVYQNINGDASEITNVIDLQPSAAPLLNAAGASTVARLKVKASGKVESGTRVAIKFISSEFSPRTFLGQEVSGLLPAPRFSFPQVANP-IGWIENTYVDDSLRVCRAIGDNVFVLTR 214
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BLAST of mRNA_P-fluviatile_contig9.15070.1 vs. uniprot
Match: A0A0G4GXJ9_VITBC (PAP_fibrillin domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GXJ9_VITBC)

HSP 1 Score: 166 bits (420), Expect = 7.110e-44
Identity = 93/200 (46.50%), Postives = 127/200 (63.50%), Query Frame = 3 
Query:  330 ADLKWRLLRASAGVNRGLSSREAEKEEIEIIVEELERQNPNPTPNDGFADGSSVLTGEWKLIFTSALDVLSLGLIPAVDIGEIYQNINEDG--SQITNVVELQPKAAPVLERFAGSTSARLEVLAASSVVGDNRLTLSFRSSQYLPKTLFGRDVSSKFPPLKLNFPEIPGTNAGWVDTTFIDEEIRVGRAFGGNLFVLAR 923
            A LK  L     GVNRG +++  +  +I  ++E LE  NPNP PN    DGSS L GEW+L+FT+ALDVL LGLIPAV +G++YQN+N DG  +   NVVELQP+   V  RF GST ARL V A++ V  D++L L+F+S  + P T  G+ V   +P  K+N         G V+TT++DE++R+ R FG  L+VL +
Sbjct:  107 AKLKKDLYLMCPGVNRGFNAKRPDSADILEVLELLESVNPNPQPNL-MKDGSSPLNGEWRLLFTNALDVLLLGLIPAVQVGQVYQNVNLDGVVNAAENVVELQPQFDSVANRFLGSTVARLRVRASAEVESDSKLYLTFQSVAFEPDTFLGQLVPRNWPWPKVNLNREGRRGGGPVETTYVDEDLRIARGFGNELYVLTK 305
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BLAST of mRNA_P-fluviatile_contig9.15070.1 vs. uniprot
Match: A0A4D9CVH1_9STRA (PAP_fibrillin domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVH1_9STRA)

HSP 1 Score: 163 bits (413), Expect = 7.920e-43
Identity = 89/218 (40.83%), Postives = 139/218 (63.76%), Query Frame = 3 
Query:  300 VDSTSTVESVADLKWRLLRASAGVNRGLSSREAEKEEIEIIVEELERQNPNPTPNDGFADGSSVLTGEWKLIFTSALDVLSLGLIPAVDIGEIYQNINEDGSQITNVVELQPKAA-----PVLERFAGSTSARLEVLAASSVVGDNRLTLSFRSSQYLPKTLFGRDVSSKFPPLKLNFPEIPGTNAGWVDTTFIDEEIRVGRAFGG-----NLFVLAR 923
            VD+T+   +  +L+  LL    G N+G S  E+E+E+I+  + +LE  NP P P + F+ G+S L+G W+L++T ALDVL LGL+P   IG+++QNI+ DG  I NVVE+   A+     P+L +  G ++ARL V A S ++   RL+L+F+S+ + P TLFG +V  +    K++F   P  N GW++TT++DE+IR+GR+ GG     ++FV  R
Sbjct:   91 VDATARATTRKELQHDLLLLLVGQNKGFSVSESEREDIDDTLRDLEAVNPTPRPTEAFSQGTSPLSGTWRLVYTDALDVLVLGLVPLAVIGKVFQNISPDGKSIANVVEVSQGASQLSFFPLLGKL-GDSTARLRVEATSEILSPTRLSLTFQSAGFEPVTLFGMEVEQQLRVPKVDFWRSP--NVGWIETTYVDEKIRIGRSPGGLGGQGSVFVFVR 305
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BLAST of mRNA_P-fluviatile_contig9.15070.1 vs. uniprot
Match: A0A7S0G6A7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G6A7_9RHOD)

HSP 1 Score: 165 bits (417), Expect = 8.260e-43
Identity = 85/202 (42.08%), Postives = 128/202 (63.37%), Query Frame = 3 
Query:  324 SVADLKWRLLRASAGVNRGLSSREAEKEEIEIIVEELERQNPNPTPNDGFADGSSVLTGEWKLIFTSALDVLSLGLIPAVDIGEIYQNIN--EDGSQITNVVELQPKAAPVLERFAGSTSARLEVLAASSVVGDNRLTLSFRSSQYLPKTLFGRDVSSKFPPLKLNFPEIPGTNAGWVDTTFIDEEIRVGRAFGGNLFVLAR 923
            S   LK  L+ A+ G NRG ++   +  EI  I+  LE +NP P PN+     S  L G+WKLI+T+ALD+L+LG+IP V +G++YQNI    D  ++ N+  L+P +APVL RF   TS  + V A + V GDN L + F + ++ P++L GRDV  K P L+L    + G  AG+++T+++DEE+R+ ++ G N+FVL R
Sbjct:  180 STEQLKRDLVLAALGTNRGFAATADQTYEIRSIISSLESKNPTPVPNE-----SEKLEGDWKLIYTNALDILALGVIPLVQLGQVYQNIKMLSDKIEVENLAILEPSSAPVLNRFGARTSLEVSVKATAEVDGDNILNIKFENQKFSPQSLLGRDVLGKLPALELG---LRGVAAGYIETSYLDEEMRIAKSIGNNIFVLIR 373
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BLAST of mRNA_P-fluviatile_contig9.15070.1 vs. uniprot
Match: A0A2V3J8M9_9FLOR (Plastid-lipid-associated protein, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J8M9_9FLOR)

HSP 1 Score: 142 bits (357), Expect = 3.900e-35
Identity = 84/213 (39.44%), Postives = 131/213 (61.50%), Query Frame = 3 
Query:  300 VDSTSTVESVADLKWRLLRASAGVNRGLSSREAEKEEIEIIVEELERQNPNPTPNDGFADGSSVLTGEWKLIFTSALDVLSLGLI-PAVDIGEIYQNI---NEDGSQITNVVELQPKAAPVLERFAGSTSARLEVLAASSVVGDNRLTLSFRSSQYLPKTLFGRDVSSKFPPLKLNFPEIP-GTNAGWVDTTFIDEEIRVGRAFGGNLFVLAR 923
            +D++     ++DLK  L   ++ VNRGL++  + +E+I  ++E++ER+NP P P       S +L GEW+L+FT+ALDVLSLGL+ P   + E+YQNI   +++   +TNVV L+P  APV   F G T   L V AA +   D R+ + F+  Q+ P ++ G ++     P  L+ P I  G+  G+++TTF+DE+IR+ RA   N+FVL R
Sbjct:   81 IDASVKKVPLSDLKLDLFGMASSVNRGLAASPSVREQILALIEQIERENPTPCPTY-----SDLLLGEWRLVFTNALDVLSLGLLAPIALVSEVYQNIENSDQNDFSVTNVVNLEPAIAPVSNSFFGRTMGALYVSAAGTRRNDTRIDIVFKGVQFKPMSIAGLEL-----PGALSTPSIAIGSPRGYIETTFLDEDIRILRAPRSNVFVLQR 283
[Close]
BLAST of mRNA_P-fluviatile_contig9.15070.1 vs. uniprot
Match: A0A7S0BNX1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNX1_9RHOD)

HSP 1 Score: 120 bits (301), Expect = 6.360e-29
Identity = 58/136 (42.65%), Postives = 91/136 (66.91%), Query Frame = 3 
Query:  522 SALDVLSLGLIPAVDIGEIYQNIN--EDGSQITNVVELQPKAAPVLERFAGSTSARLEVLAASSVVGDNRLTLSFRSSQYLPKTLFGRDVSSKFPPLKLNFPEIPGTNAGWVDTTFIDEEIRVGRAFGGNLFVLAR 923
            +ALD+L+LG+IP V +G++YQNI    D  ++ N+  L+P +APVL RF   TS  + V A + V GDN L + F + ++ P++  GRDV  K PPL+L    + G  AG+++T+++DEE+R+ ++ G N+FVL R
Sbjct:    1 NALDILALGVIPLVQLGQVYQNIKMLSDKIEVENLAILEPSSAPVLNRFGARTSLEVSVKATAEVDGDNILNIKFENQKFSPQSFLGRDVLGKLPPLELG---LRGVAAGYIETSYLDEEMRIAKSIGNNIFVLIR 133
[Close]
BLAST of mRNA_P-fluviatile_contig9.15070.1 vs. uniprot
Match: R7Q658_CHOCR (PAP_fibrillin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q658_CHOCR)

HSP 1 Score: 122 bits (307), Expect = 5.090e-28
Identity = 80/222 (36.04%), Postives = 120/222 (54.05%), Query Frame = 3 
Query:  300 VDSTSTVESVADLKWRLLRASAGVNRGLSSREAEKEEIEIIVEELERQNPNPTPNDGFADGSSVLTGEWKLIFTSALDVLSLGLI-PAVDIGEIYQNINE---DGS-----QITNVVELQPKAAPVLERFAGSTSARLEVLAASSVVGDNRLTLSFRSSQYLPKTLFGRDVSSKFPPLKLNFPEIPGTNAGWVDTTFIDEEIRVGRA-----FGGNLFVLAR 923
            VD+ +    ++DLK  L  A +  NRGL++   ++  I  +V ELER  P   P    AD   +L G W+L+FT+ALDVLSLGL+ P   +G+I+QNI E   +G       I NVV+L+P  APV     G +   + V A      D+R+ ++F  +    + +FG  + ++ P  K       G+  G+++TTF+DE+IRV RA       G LF+L R
Sbjct:   76 VDAQTRAVPISDLKCSLYAAVSSTNRGLTASADDRANILSLVAELERAKPPTAP----ADDPGMLCGRWRLLFTNALDVLSLGLLAPVAQVGQIFQNIYEVPLEGKGDYDYDIENVVQLEPAFAPVSNVLGGQSITSITVSAEGRKTSDSRVDITFVQNAIKQEKIFGMQLPNEIPAAKFAI----GSPVGYIETTFLDEDIRVARAPPVRSQEGGLFLLIR 289
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJ99_9PHAE1.750e-11770.00PAP_fibrillin domain-containing protein n=2 Tax=Ec... [more]
A0A7S2XYK8_9STRA3.770e-5850.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6S9HUA9_HETAK2.830e-5545.58Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V1M850_HETAK3.720e-4446.88Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4GXJ9_VITBC7.110e-4446.50PAP_fibrillin domain-containing protein n=1 Tax=Vi... [more]
A0A4D9CVH1_9STRA7.920e-4340.83PAP_fibrillin domain-containing protein n=3 Tax=Mo... [more]
A0A7S0G6A7_9RHOD8.260e-4342.08Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A2V3J8M9_9FLOR3.900e-3539.44Plastid-lipid-associated protein, chloroplastic n=... [more]
A0A7S0BNX1_9RHOD6.360e-2942.65Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
R7Q658_CHOCR5.090e-2836.04PAP_fibrillin domain-containing protein n=1 Tax=Ch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:658936..664710 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.4
Seed ortholog evalue1.5e-99
Seed eggNOG ortholog2880.D7FJD3
EggNOG free text desc.response to acid chemical
EggNOG OGs28JPH@1,2QS2T@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionPAP fibrillin
Ec32 orthologEc-14_005910.1
Exons7
Model size1435
Cds size828
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817312.3757792-UTR-P-fluviatile_contig9:658935..6594411622817312.3757792-UTR-P-fluviatile_contig9:658935..659441Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 658936..659441 -
1693572020.7165534-UTR-P-fluviatile_contig9:658935..6594411693572020.7165534-UTR-P-fluviatile_contig9:658935..659441Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 658936..659441 -
1622817312.4724529-UTR-P-fluviatile_contig9:664609..6647101622817312.4724529-UTR-P-fluviatile_contig9:664609..664710Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 664610..664710 -
1693572024.8727117-UTR-P-fluviatile_contig9:664609..6647101693572024.8727117-UTR-P-fluviatile_contig9:664609..664710Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 664610..664710 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817312.388966-CDS-P-fluviatile_contig9:659441..6594811622817312.388966-CDS-P-fluviatile_contig9:659441..659481Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 659442..659481 -
1693572020.729263-CDS-P-fluviatile_contig9:659441..6594811693572020.729263-CDS-P-fluviatile_contig9:659441..659481Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 659442..659481 -
1622817312.4001982-CDS-P-fluviatile_contig9:660467..6606671622817312.4001982-CDS-P-fluviatile_contig9:660467..660667Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 660468..660667 -
1693572022.6396053-CDS-P-fluviatile_contig9:660467..6606671693572022.6396053-CDS-P-fluviatile_contig9:660467..660667Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 660468..660667 -
1622817312.4112606-CDS-P-fluviatile_contig9:661099..6611801622817312.4112606-CDS-P-fluviatile_contig9:661099..661180Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 661100..661180 -
1693572023.9500535-CDS-P-fluviatile_contig9:661099..6611801693572023.9500535-CDS-P-fluviatile_contig9:661099..661180Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 661100..661180 -
1622817312.4226139-CDS-P-fluviatile_contig9:661846..6620171622817312.4226139-CDS-P-fluviatile_contig9:661846..662017Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 661847..662017 -
1693572024.8203523-CDS-P-fluviatile_contig9:661846..6620171693572024.8203523-CDS-P-fluviatile_contig9:661846..662017Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 661847..662017 -
1622817312.4332356-CDS-P-fluviatile_contig9:662494..6626081622817312.4332356-CDS-P-fluviatile_contig9:662494..662608Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 662495..662608 -
1693572024.8385036-CDS-P-fluviatile_contig9:662494..6626081693572024.8385036-CDS-P-fluviatile_contig9:662494..662608Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 662495..662608 -
1622817312.4452946-CDS-P-fluviatile_contig9:663157..6633301622817312.4452946-CDS-P-fluviatile_contig9:663157..663330Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 663158..663330 -
1693572024.8499725-CDS-P-fluviatile_contig9:663157..6633301693572024.8499725-CDS-P-fluviatile_contig9:663157..663330Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 663158..663330 -
1622817312.4592774-CDS-P-fluviatile_contig9:664560..6646091622817312.4592774-CDS-P-fluviatile_contig9:664560..664609Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 664561..664609 -
1693572024.8606417-CDS-P-fluviatile_contig9:664560..6646091693572024.8606417-CDS-P-fluviatile_contig9:664560..664609Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 664561..664609 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15070.1prot_P-fluviatile_contig9.15070.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig9 659442..664609 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig9.15070.1

>prot_P-fluviatile_contig9.15070.1 ID=prot_P-fluviatile_contig9.15070.1|Name=mRNA_P-fluviatile_contig9.15070.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=276bp
MDRFGRLVILCLLFSEGSESFTPGYFSGSGGATSGRTLGNGGFGAGVSST
RLKHVGWRRSSSVVVDVDSTSTVESVADLKWRLLRASAGVNRGLSSREAE
KEEIEIIVEELERQNPNPTPNDGFADGSSVLTGEWKLIFTSALDVLSLGL
IPAVDIGEIYQNINEDGSQITNVVELQPKAAPVLERFAGSTSARLEVLAA
SSVVGDNRLTLSFRSSQYLPKTLFGRDVSSKFPPLKLNFPEIPGTNAGWV
DTTFIDEEIRVGRAFGGNLFVLARA*
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mRNA from alignment at P-fluviatile_contig9:658936..664710-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig9.15070.1 ID=mRNA_P-fluviatile_contig9.15070.1|Name=mRNA_P-fluviatile_contig9.15070.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5775bp|location=Sequence derived from alignment at P-fluviatile_contig9:658936..664710- (Porterinema fluviatile SAG_2381)
AACGACGGTCACTCGTGTCCCCATCCCCCATCGGGCTCTCGTGTCTCGTG
TCTCGCTTTCGCTCGTTCTCCGGTCATCCTTGACGCCTGTTTTATTCAAT
CATGGACAGATTCGGCAGACTTGTAATACTGTGCCTGCTCTTTTCCGAAG
GTAAGGGCGATTGCGTGCATGAAATGCGACTTGAGCTCGATGGGGAGGGG
GCTTGTCTACAGCTGTAGTTTGAGTCCGACGCACAAACCGTCGCTGGCCT
TGCAGCGTGATTGACTTGCACTCTACTTTTCACCTTGATTCCGCTTTTTT
TGTGTTTGATACACTAGAGGAGTTGCGTGCGTTGCTGCTCAACGTGTATT
GCTGCTTAATGCATTCACTCATCATCAAATGATTACAGCAGCGCGGCGTA
CCACATATCCGAGTTGGTACGTCCAGGCGACGCACCCGTTCACCTCGGGG
GCGAGCGGCGAATTGCTGCCACTGCTTGTGGAGAAGGTTGCAATCACGCT
CCTTCCCTGTAGAATCGAAGATGTGGATAACCGATAACGAACCACCTCCC
CCTATTTGACGAATTCTTCTGTTTGCATCCAGTTTCTAGTTATCCGATCA
TAGTCTACATGTCCGTCGTCCTGCAATCGCCAAATGGCTACATTGGAGCG
CTTTGTCCTGACCGGCCTTGAGTTCGAATTAAACCGGCATTTTTTTTCCG
ACGATGGAAAAAATAAAGCACGCGCCCAGGAGATGTGACGAAATGGCACC
CATTGGACTCGCTGTAGACAACGAGATTCACGGGATTTTCGACGGATTCA
TCCCTGGTTTTGGTTGCTTGAAAATCTGGTAGGTTTCTGCGATAAAGTTA
CCTTTTTTTGGATATTCCATGGGTGTGTACTGAATACTCCATGGGCGTTT
TTGTATGACTACCGGATGCGTCAAGCTATCGCTGTAAGGAAGCCAACACG
TAGCTCCTTCAAAGCAGTCCTGTTTATCGGGGTGCCCCTTTGGTGTTTGA
GTGTGCATTTGTAGAATGGGTGCCGCTGCCGTCTTTAAAACCGAGTTCTT
GGCATCTGTCATGAGATGGATAAGACACGCAACATACCTGGAACGTGTCT
CTGCTCCCTTCCCTTTCAATATTGCAGGTGCTCTTATACCTCAGCCCGAA
TATGAACTTTCTCTGTGAAGGACTCCACATCAGGCCTTCGTCTGAGACCG
GGTGTTCCTTGCATAATTGTTGAGTGTGCATTTTCTACTTTGTATACACA
GCATTGCACGACCTAAAGACTCGTCGATCTATACCGCCGGGAAGAACCGA
TCCAGCTGAAGAGCCTGGTGAAGAAGAATTGCCTTGTATTTTTTATGTAC
GCATCATGATCAATCGCTGGACCGCCGCAGGATCTGAATCATTCACGCCC
GGATACTTCTCCGGGTCTGGAGGAGCTACAAGCGGCCGAACCCTGGGAAA
TGGAGGTTTCGGCGCGGGTGTTTCCTCGACCCGGCTGAAACACGTAGGGT
GGCGACGGTCATCATCGGTGGTGGTGGATGTCGACAGCACTTCGACCGTT
GAGGTGAGCTTTTTTTTTCCTTTTTTTTCCAGAGGATTGATTCCCACTCG
ACAGACGCAAGACCCCGAGTAGTCATTACCGTCCCTGGCTCGGAACGGTA
TGGAAACCAAGGCAATGGGCGCGCTCCTCATTCGACAGAGTTGAAGTGGT
GTTGGTGCCGCCAGCGGTCCTTCAATTCATGGTTGGAGTTTTTCGTTGGT
TTTGAACAAGCACGTGCTCAGATAGTCTTGAAGAGATGGAGCGAACTCAA
AACTGGAGCCGATACTGAGTGAGGGCGTCAGTTCTACATCGCCTTTGAAG
GTTCCTCGACCCTCCTTCACATCTATGCGACGAATATGCATGGAACGGTT
GTAGGTGGGACTCCACATGCGGTGGTTCGGGTCGCACGGTCACGGAACAT
GCGAGGCACAACAGTGGTCATCGCTCTGAGCGCTGGATTGTCATGTCATG
GGATATCGTGCGAAAGATTTTCCATCATAAATAATGAAGGTATTCTCACA
CGGGCAACATTCGTCGCTATCGCGTCTTGTGCTTGATCGCAAAACTGTGT
AGTCGGTGGCTGATCTGAAATGGAGGCTTTTGAGAGCTTCTGCCGGAGTC
AACAGAGGACTCAGCAGCCGGGAAGCAGAGAAGGAGGAAATAGAGATTAT
TGTGGAAGAGCTTGAGGTATGAATCTGTGCGAACATTCGGGTACATTGTG
GCCTTGTAGCAGTCTCATAGGCGACACGGAAATGTTGACCCTAAAAAAGC
TCCTGTCGATGACGCCAACAGTTCCGCAGCTCAAAGAGTGCCGATTGCAC
CTAACAGGTACAAATGTGGGTGAGAATGTTTTTCAACAAGACTCCCCAAA
TTGTATCAAAATATTTCAGCGTGTTTGAAGGTTCAAGCTCCCCAAAGCAA
GTGGATATCTGCATGCCTGCGAGTGGCCTCGTGTCCAGAACAGCATATAT
ACCTGGAACTGTGAAGGTGCTGCGACGTGAGACGGACAAATGAACGTTTG
AAAGCTGTTGCACGATCAAAATACGTGGGTGTGATGCGTGTTCCACTGTC
CAACCCACCCGCACGAACCACAGTCACATTTTCGGCGTATTTCCGCCTGC
TGACAATCTCATGTCGCCTGCGTCGTTTGGCACACAACCCTAGCGGCAAA
ACCCGAACCCTACGCCAAATGACGGCTTCGCGGACGGTTCTTCCGTCCTT
ACCGGGGAGTGGAAGCTTATTTTCACGTCCGCGTTGGACGTGCTCTCGCT
GGGGCTCATCCCAGCCGTCGATATCGGCGAAATCTACCAGAATATCAATG
AGGATGGCAGTCAGGTGAGGGAATTTTACGAAATAAATTTTACGAAAGAA
TGTTGCGCTTTTGTTCTCGCGCTGGAGATGAACGTAAGCGCTGACGCTTT
TCTCACAACGGTAGTTTTTCGCGTGAATTGGCATCCAGTAACTGGTTTCT
TTTTCTACTGCTTCACACGTGCGTTACTGCTTTCACATGGACGGTCCAAA
AGATGCCTCAAGGTGCGCTCACGGTACCTGCACTGCAGCTGCTCGGGTTG
AACATGTAGGCGACTAGGTGTTACCATGGCGGTGTCCTCCCTCTCTCTTC
CATTGTCTCTTGGCATTCTTGCTTGCCCGTTCACTGTCCATCTACCCTAT
GCCTTTTCCTGGCTCACTCCGTTGTGCCGCTTACAACCTCAAGATGTTGT
CGAGTTTTTGCTGGCGCTAGCACACTTTGTTTCCGACTTGTGAAACTCAG
TTTGTTGTTGCTGTTGCTGTTCTTGTTTTTGTTCTTGTTTTCACAGTAAA
CCCCTTTCCGATCACATCCAGTACGTCCAAATGTCCGTACACTGTCCTGC
CGAAACGATTCCGCGGTCACCGGATGGAAAAAGCAAAAATGCCGCTGGGG
AATAATGAGTATACATGGATCCGACAAGAATCCAAACAAAGTAATAGAGC
TTCCTGTGAAAAAAACTCCAAAATTGACAGATAACAAACGTCGTGGAGCT
TCAGCCGAAGGCGGCTCCGGTGTTGGAGCGTTTCGCCGGCAGTACCTCGG
CAAGACTTGAGGTAGGTCAAAGGGTGATCGCCGCACAAGTGCTGTGGGGT
CTGTTAAAATTCGCTTGACACCTATTTGCGCTCGTATCATATGAAATTTG
TTTTGAAGCCGTCTCCAGTTTCGGCCCTCTTGCTCAGCGCGTCGGGGGAC
GGGAGAAAGGTTGAGATGGAAGCAAACGCAAAGGGGGCCCCTTCGTGCGG
GTGGCGCGACGACAAGCCCCTGCTACTTCAATCTCACATGCGCCTTCATC
GTTGGTATAGCTCTGAATGTACTGTTGGTTACGCGCGGTTTGTAGGTTGG
AAAAGCATGTTCCGACCTGTAACTGTATGACCCTAGCCGGTGCAAGCATA
CAAGGACGTTGACACCTGTCCCCCCTTTGTTTCTGAGAAAACGCTTTTCA
TGCCTGCACGGAAATCGTGTTCCTTTCACCGTGTCCGGAACAGGTTCTTG
CGGCGTCCTCGGTGGTGGGAGACAATCGCCTTACCCTCTCGTTCCGCAGT
TCGCAGTACTTGCCGAAGACGCTGTTCGGCCGGGACGTGTCGTCGAAGTT
TCCACCCCTTAAGTTAAATTTTCCGGAAATCCCTGGCACAAACGCAGGGT
GGGTGGACACAACTTTCATCGATGAAGAGATCCGCGTCGGGAGGTGTGCG
AATTTGGTCGGGCGTAGACTTTGAGAGGATACCTTGGGTTCGAAAATTGT
GGGCCCTCACTCGCCTACTTCTTCTGTTCGTTTTGACTTGGTAAGAGCAT
CCGAGAACCTCAGAGGATGATGCTGTATCGATGGACTTGCGTGCCGCGGG
AAGACGTCTACCTGCCGCGATTGTTGCCTCCCTTCTCGATATGAATATCG
CTGGCCGTTCACCGAATCATCGGTAAAGATTCAGCACGCAGTGAGAGATT
TGGAACGAGGGCACCCACTATGTGCGTGTTTTGGGTTATCAACCTACGGG
AAGCAACCATATCAACCGCAAGAGAGGTTTGTACGTCCGAGCGTTAGTCG
AATCCCCCCTTTCGTTAAGAAGGGTCACAATACAAACACGTACTCCTGTT
TTTTGCCTTCCTGCGGGAGACCGAGACGTCGGTGACTGTCCTCGGAAATC
TTGGTGGTGACGATCTAAGGATGCCGGGTCGTCGTCCTGGTGTGTGTGCT
CAAGGGACTAAATTCCTGTCATTTTTTTGGAGATTCTCTCCCGATGCTTT
GCTCTGCGTACCTTTCCCGTCTTAGTCTTTCCTCGTCCCTCGCTGCTGAG
TACGTTATTTCTGAATGCACTTCTCCCGTATTTTCCATGGGTTCAGATAT
ATGGAATGGTATTGCGCTTGCCGGTGCGTCCGTTGACACAGAGATGTACG
ACGATGGTATTTTTTGTTCGTGCTTCTAAAACTCTCGCATTTTTTTATCT
ATCGAGATGCTTTGCTGCCATACATAAGCTACCTCCTTGAAAATTCGGAA
ATTACTTGCGGTGAGCACTCGACGATTTCGCTGGAACAGCCGAAGCAACG
CAGTTGCAGGGTATCATTGATACTGTACTGTTAAAAATGGAAAGTCGTCA
GAAAAACCACTGCTTCCCCAACTTCAAAGAGATAAACAGCTGCAACACAT
TTTTTGCTTCTCCGTCACACCGCTGCCAGGGCCTTCGGAGGGAACCTGTT
CGTGCTGGCTCGCGCCTGAGTGGATCAGATCGAGCATACTTTGTGTGGGT
ACCTGCGGCAAATATTCGAATACCTTATTAACGTCTCCGGTACTCCTCGA
CGTGCACTTGATTCGGAGGCGATGCCTCTCCCAAGGACTGCGTCCATCTT
TAGAGTGATATAAGCAAGAGTCTTGGCTGTTGTGGTCATGGGGTGCATAC
GTGTACTGAAGTGGCTCAAAGACGAGAAATGTGATTTGTACGGACGGGTA
GGTCATGCGTGCAGACAAGTACTGTGTTGACTTCGGGGACCGCCAGGAGC
TGACCAGCACGTGCTACATAGATATTCGAGTGGTTTCAGTCATTTGCATA
CTCCAGTACAAGGTTGATGCATTACGCGGGGTAGAGTAGGACGGGGTGAA
CACCAACGGTGATTTTTACGACTCTAAAATACAAGTTTGTCCATGCAGCA
AGATGGTGGACTTGGGCGTCTGGTCAACGAGCGGAGTTTGACTGCAGCGT
ACATGCGATGGACACGCCAAGAAGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig9:658936..664710-

>mRNA_P-fluviatile_contig9.15070.1 ID=mRNA_P-fluviatile_contig9.15070.1|Name=mRNA_P-fluviatile_contig9.15070.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1656bp|location=Sequence derived from alignment at P-fluviatile_contig9:658936..664710- (Porterinema fluviatile SAG_2381)
ATGGACAGATTCGGCAGACTTGTAATACTGTGCCTGCTCTTTTCCGAAGA
TGGACAGATTCGGCAGACTTGTAATACTGTGCCTGCTCTTTTCCGAAGGA
TCTGAATCATTCACGCCCGGATACTTCTCCGGGTCTGGAGGAGCTACAAG
CGGCCGAACCCTGGGAAATGGAGGTTTCGGCGCGGGTGTTTCCTCGACCC
GGCTGAAACACGTAGGGTGGCGACGGTCATCATCGGTGGTGGTGGATGTC
GACAGCACTTCGACCGTTGAGGATCTGAATCATTCACGCCCGGATACTTC
TCCGGGTCTGGAGGAGCTACAAGCGGCCGAACCCTGGGAAATGGAGGTTT
CGGCGCGGGTGTTTCCTCGACCCGGCTGAAACACGTAGGGTGGCGACGGT
CATCATCGGTGGTGGTGGATGTCGACAGCACTTCGACCGTTGAGTCGGTG
GCTGATCTGAAATGGAGGCTTTTGAGAGCTTCTGCCGGAGTCAACAGAGG
ACTCAGCAGCCGGGAAGCAGAGAAGGAGGAAATAGAGATTATTGTGGAAG
AGCTTGAGTCGGTGGCTGATCTGAAATGGAGGCTTTTGAGAGCTTCTGCC
GGAGTCAACAGAGGACTCAGCAGCCGGGAAGCAGAGAAGGAGGAAATAGA
GATTATTGTGGAAGAGCTTGAGCGGCAAAACCCGAACCCTACGCCAAATG
ACGGCTTCGCGGACGGTTCTTCCGTCCTTACCGGGGAGTGGAAGCTTATT
TTCACGTCCGCGTTGGACGTGCTCTCGCTGGGGCTCATCCCAGCCGTCGA
TATCGGCGAAATCTACCAGAATATCAATGAGGATGGCAGTCAGCGGCAAA
ACCCGAACCCTACGCCAAATGACGGCTTCGCGGACGGTTCTTCCGTCCTT
ACCGGGGAGTGGAAGCTTATTTTCACGTCCGCGTTGGACGTGCTCTCGCT
GGGGCTCATCCCAGCCGTCGATATCGGCGAAATCTACCAGAATATCAATG
AGGATGGCAGTCAGATAACAAACGTCGTGGAGCTTCAGCCGAAGGCGGCT
CCGGTGTTGGAGCGTTTCGCCGGCAGTACCTCGGCAAGACTTGAGATAAC
AAACGTCGTGGAGCTTCAGCCGAAGGCGGCTCCGGTGTTGGAGCGTTTCG
CCGGCAGTACCTCGGCAAGACTTGAGGTTCTTGCGGCGTCCTCGGTGGTG
GGAGACAATCGCCTTACCCTCTCGTTCCGCAGTTCGCAGTACTTGCCGAA
GACGCTGTTCGGCCGGGACGTGTCGTCGAAGTTTCCACCCCTTAAGTTAA
ATTTTCCGGAAATCCCTGGCACAAACGCAGGGTGGGTGGACACAACTTTC
ATCGATGAAGAGATCCGCGTCGGGAGGTTCTTGCGGCGTCCTCGGTGGTG
GGAGACAATCGCCTTACCCTCTCGTTCCGCAGTTCGCAGTACTTGCCGAA
GACGCTGTTCGGCCGGGACGTGTCGTCGAAGTTTCCACCCCTTAAGTTAA
ATTTTCCGGAAATCCCTGGCACAAACGCAGGGTGGGTGGACACAACTTTC
ATCGATGAAGAGATCCGCGTCGGGAGGGCCTTCGGAGGGAACCTGTTCGT
GCTGGCTCGCGCCTGAGGCCTTCGGAGGGAACCTGTTCGTGCTGGCTCGC
GCCTGA
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