mRNA_P-fluviatile_contig9.15021.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig9.15021.1
Unique NamemRNA_P-fluviatile_contig9.15021.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig9.15021.1 vs. uniprot
Match: A0A6H5KHN1_9PHAE (Str_synth domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN1_9PHAE)

HSP 1 Score: 412 bits (1059), Expect = 4.710e-137
Identity = 207/279 (74.19%), Postives = 232/279 (83.15%), Query Frame = 2
Query:  503 INSLTDLPRPLGGE-AATVAAAPETMLPLVFLNDFEITNEGTVFLSDSSWKYARRDNRRELIDGAPNGRLLRFEPSSGDLHTVVCGLHFPNGVEVDPSGKKLMLVESSRFRVLEVDL------QALSSDAR-----PSASLTDALRFCGEEEALPDGVRIFADALPGFADNLVFDETNGGYVVAAGTKVAAPFSPLHLALKKPGVFRSILGKLVPMGILDKLAPSYGLVFVLGLDGTVKESMHDATGRTAFVSTARRNSKSGYTFLGSSQNPYLGRVRL 1303
            INSLTD+P P GGE    V+AA ET  P++F NDF+ T EG VFLSDSSWKY R  NRR+++DGAPNGRLLRF+P SGDLHTV+CGLHFPNGVE+ PSGKKL++VES RFRVLEVDL      QA S ++      P+ASL DAL  CGEEEALPDGVR+FA+ALPGF DNLVFDET GGYV  AGTKVAAPFS LHLALKKP +FR+I+GKLVPMG+++ L PSYGLVFVLGLDGTVKESMHDATGRTAFVS A R+SKSGYTFLGSSQN YLGRVRL
Sbjct:  184 INSLTDVPVPFGGEPGGGVSAAEETTRPVLFFNDFDFTAEGIVFLSDSSWKYPRAHNRRDIVDGAPNGRLLRFDPGSGDLHTVMCGLHFPNGVELHPSGKKLLVVESMRFRVLEVDLAHVLQGQASSENSHREEKTPAASLVDALGSCGEEEALPDGVRVFAEALPGFVDNLVFDETRGGYVAGAGTKVAAPFSALHLALKKPAIFRTIIGKLVPMGVIENLVPSYGLVFVLGLDGTVKESMHDATGRTAFVSAAYRSSKSGYTFLGSSQNNYLGRVRL 462          
BLAST of mRNA_P-fluviatile_contig9.15021.1 vs. uniprot
Match: D7FPD7_ECTSI (Chromosome 20 open reading frame 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPD7_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 4.010e-80
Identity = 132/171 (77.19%), Postives = 144/171 (84.21%), Query Frame = 2
Query:  824 RFRVLEVDL------QALSSDAR-----PSASLTDALRFCGEEEALPDGVRIFADALPGFADNLVFDETNGGYVVAAGTKVAAPFSPLHLALKKPGVFRSILGKLVPMGILDKLAPSYGLVFVLGLDGTVKESMHDATGRTAFVSTARRNSKSGYTFLGSSQNPYLGRVRL 1303
            RFRVLEVDL      QA S ++R     P+ASL DAL  CGEEEALPDGVR+FA+ALPGF DNLVFDET GGYV  AGTKVAAPFS LHLALKKP +FR+I+GKLVPMG+++ L PSYGLVFVLGLDGTVKESMHDATGRTAFVS A R+SKSGYTFLGSSQN YLGRVRL
Sbjct:    2 RFRVLEVDLAHVLQGQASSENSRREENTPAASLVDALGSCGEEEALPDGVRVFAEALPGFVDNLVFDETRGGYVAGAGTKVAAPFSALHLALKKPAIFRTIIGKLVPMGVIENLVPSYGLVFVLGLDGTVKESMHDATGRTAFVSAAYRSSKSGYTFLGSSQNKYLGRVRL 172          
BLAST of mRNA_P-fluviatile_contig9.15021.1 vs. uniprot
Match: A0A835YS31_9STRA (Str_synth domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS31_9STRA)

HSP 1 Score: 217 bits (552), Expect = 2.260e-61
Identity = 126/276 (45.65%), Postives = 168/276 (60.87%), Query Frame = 2
Query:  506 NSLTDLPRPLGGEAATVAAAPETMLPLVFLNDFEITNEGTVFLSDSSWKYARRDNRRELIDGAPNGRLLRFEPSSGDLHTVVCGLHFPNGVEVDPSGKKLMLVESSRFRVLEVDLQALSSDARPSASLTDALRFCGEEEALPDGVRIFADALPGFADNLVFDETNGGY----------VVAAGTKVAAPFSPLHLALKKPGVFRSILGKLVPMGILDKLAPSYGLVFVLGLD-GTVKESMHDATGRTAFVSTARRNSKSGYTFLGSSQNPYLGRVR 1300
            ++ + +P P  G A    A  +T  P+ FLND  +  +GT  ++DSSWK+AR +NR E++D AP GRLLRF+P+ G L T++CGLHF NGV +  +G   ++ ES RFRVLEV L ALS+DA  +++   AL  C    ALP  VR+ A  LPGFADNL  +E+  G           ++  GT+ A PFS LH     P   RS +  L+   ++++L P YGLV  L    G V+ S HD TGR  FVSTA R+  +GY FLGSSQNP+L RVR
Sbjct:  190 DAASTVPEPAAGGAR---AHRDTRRPVRFLNDLALAPDGTFLITDSSWKHARFNNRLEILDAAPRGRLLRFDPADGSLKTLLCGLHFANGVVIR-NGTTALIAESLRFRVLEVPLAALSADAGDASATAAALTRCSGA-ALPPHVRVLAANLPGFADNL--EESAPGXXXXXXXXXTLLIGVGTRAAKPFSLLHYMFWLPPAARSAVVALLGPVLMERLIPRYGLVLELNAQTGEVQASYHDPTGRVPFVSTALRHPTTGYLFLGSSQNPFLARVR 458          
BLAST of mRNA_P-fluviatile_contig9.15021.1 vs. uniprot
Match: A0A7S2V5T4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5T4_9STRA)

HSP 1 Score: 200 bits (509), Expect = 3.280e-56
Identity = 112/272 (41.18%), Postives = 156/272 (57.35%), Query Frame = 2
Query:  491 FLLEINSLTD--LPRPLGGEAATVAAAPETMLPLVFLNDFEITNEGTVFLSDSSWKYARRDNRRELIDGAPNGRLLRFEPSSGDLHTVVCGLHFPNGVEVDPSGKKLMLVESSRFRVLEVDLQALSSDARPSASLTDALRFCGEEEALPDGVRIFADALPGFADNLVFDETNGGYVVAAGTKVAAPFSPLHLALKKPGVFRSILGKLVPMGILDKLAPSYGLVFVLGLDGTVKESMHDATG-RTAFVSTARRNSKSGYTFLGSSQNPYLGRV 1297
            F+L++NS T   L    G   A   AAPE  LP  FLND ++     ++ +D+S+K  R  NR E++DGAP GRLLR+   SG +  VVCGLHFPNGV+V   GK L++VES+RFR+L+  L  LSS   P       L +CGE  +LP G   +A  +PGFADN+        Y+VA G +   PFS L+    +P +   +LGKL+P+  + KLAP + LV      G + ++MHD  G R   +S    +  +G  +LGSS N +LG+ 
Sbjct:   91 FMLDLNSSTATWLWDSHGSPQAVDGAAPEAALPAKFLNDLDLVASKYIYFTDTSYKNTRALNRAEVVDGAPRGRLLRYSLGSGAVEVVVCGLHFPNGVQVSHDGKALLVVESTRFRILQFSLAELSSANFP-------LDYCGESPSLPAGATEWASMVPGFADNIRAQHDGSTYIVAFGVRSVKPFSLLYFVYPRP-MISYVLGKLIPLRYVTKLAPKHSLVGFFDQSGNIVKTMHDPKGKRMPLISEGHISPVTGDLYLGSSFNFFLGKA 354          
BLAST of mRNA_P-fluviatile_contig9.15021.1 vs. uniprot
Match: A0A7S2V6X8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6X8_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.230e-52
Identity = 112/272 (41.18%), Postives = 156/272 (57.35%), Query Frame = 2
Query:  491 FLLEINSLTD--LPRPLGGEAATVAAAPETMLPLVFLNDFEITNEGTVFLSDSSWKYARRDNRRELIDGAPNGRLLRFEPSSGDLHTVVCGLHFPNGVEVDPSGKKLMLVESSRFRVLEVDLQALSSDARPSASLTDALRFCGEEEALPDGVRIFADALPGFADNLVFDETNGGYVVAAGTKVAAPFSPLHLALKKPGVFRSILGKLVPMGILDKLAPSYGLVFVLGLDGTVKESMHDATG-RTAFVSTARRNSKSGYTFLGSSQNPYLGRV 1297
            F+L++NS T   L    G   A   AAPE  LP  FLND ++     ++ +D+S+K  R  NR E++DGAP GRLLR+   SG +  VVCGLHFPNGV+V   GK L++VES+RFR+L+  L  LSS   P       L +CGE  +LP G   +A  +PGFADN+        Y+VA G +   PFS L+    +P +   +LGKL+P+  + KLAP + LV      G + ++MHD  G R   +S    +  +G  +LGSS N +LG+ 
Sbjct:  558 FMLDLNSSTATWLWDSHGSPQAVDGAAPEAALPAKFLNDLDLVASKYIYFTDTSYKNTRALNRAEVVDGAPRGRLLRYSLGSGAVEVVVCGLHFPNGVQVSHDGKALLVVESTRFRILQFSLAELSSANFP-------LDYCGESPSLPAGATEWASMVPGFADNIRAQHDGSTYIVAFGVRSVKPFSLLYFVYPRP-MISYVLGKLIPLRYVTKLAPKHSLVGFFDQSGNIVKTMHDPKGKRMPLISEGHISPVTGDLYLGSSFNFFLGKA 821          
BLAST of mRNA_P-fluviatile_contig9.15021.1 vs. uniprot
Match: A0A482SBF4_9ARCH (Str_synth domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBF4_9ARCH)

HSP 1 Score: 162 bits (410), Expect = 1.100e-42
Identity = 101/256 (39.45%), Postives = 144/256 (56.25%), Query Frame = 2
Query:  542 EAATVAAAPETMLPLVFLNDFEITNEGTVFLSDSSWKYARRDNRRELIDGAPNGRLLRFEPSSGDLHTVVCGLHFPNGVEVDPSGKKLMLV--ESSRFRVLEVDLQ---ALSSDARPSASLTDALRFCGEEEALPD-GVRIFADALPGFADNLVFDETNGGYVVAAGTKVAAPFSPLHLALKKPGVFRSILGKLVPMGILDKLAPSYGLVFVLGLDGTVKESMHDATGR-TAFVSTARRNSKSGYTFLGSSQNPYL 1288
            +A    A     LPL FLND  I     +F SDSS+ + R +NR E +DGAP GRL R+   +  LH V+CGLHFPNGVE     +K+++V  E +RFR+L+VD+Q    LS     S S   +L    ++ +    GV IFA+++PG  DN+     NG   V  G+K   PFS +++A +   + R ++GKL  M  ++KL P YGLV V    G V  S HD TG+ T+FVS A  +  +G  ++GS    ++
Sbjct:   17 DAKNSNANSSATLPLRFLNDLTILPFSNIFFSDSSYLHTRSENREEALDGAPRGRLFRYNLHTKQLHVVMCGLHFPNGVERMDIDRKVVVVVAELARFRILKVDIQHPAVLSGLYTQSCSEDGSLHHAIDQRSFEHTGVDIFAESVPGVIDNIRLH--NGHLYVGLGSKSTKPFSIIYVAYQSFWL-RYVIGKLASMKYVEKLLPKYGLVLVFDHSGRVVASYHDPTGKMTSFVSQATVHPLTGDMWIGSHSEAFI 269          
BLAST of mRNA_P-fluviatile_contig9.15021.1 vs. uniprot
Match: A0A4D9CLY3_9STRA (Str_synth domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLY3_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.120e-38
Identity = 103/281 (36.65%), Postives = 147/281 (52.31%), Query Frame = 2
Query:  557 AAAPETMLPLVFLNDFEIT-NEGTVFLSDSSWKYARRDNRRELIDGAPNGRLLRFEPSSGDLHTVVCGLHFPNGVEV------DPSGK---KLMLVESSRFRVLEVDLQALSSDARPSASL-TDALRFCGEEEALPDGVRIFADALPGFADNLVF---DETNGG--------------YVVAAGTKVAAPFSPLHLALKKPGVFRSILGKLVPMGILDKLAPSYGLVFVLGLDGTVKESMHDATGRTAFVSTARRNSKSGYTFLGSSQNPYLGRVRL*CFG 1315
            A  P    PL F ND  +  + G +F SDS+W ++R  +  E++DG P GRL R+  ++G +  V+CGLHF NGV+V        +G+    +++VES+RFR+L+VDL A    AR    +   AL+ C EE ALP    + A+ LPG  DNL     +E   G               V+  G K A PFS LH  L +    R +LG LVP+       P YG+  VL L+G +   + D TGRT F+S    + ++G   LGS +N ++GRV +   G
Sbjct:  242 ALHPGVRAPLGFTNDLSVVASTGDIFFSDSTWAWSRALHAVEVLDGGPRGRLFRYVGATGAVEPVLCGLHFANGVQVLGEEEETRAGRLPASVLVVESTRFRILKVDLGAW---ARAEEGVKARALQACEEENALPPFASVLAEGLPGLPDNLRLLRREEAGAGSKKGWLGGEGEEAVLVLGMGVKNAKPFSLLHF-LYQHLALRLLLGALVPLPYFHYFMPKYGVAGVLSLEGRLLRVLQDPTGRTPFLSEVHVHPETGDLLLGSFRNKFVGRVTVSALG 518          
BLAST of mRNA_P-fluviatile_contig9.15021.1 vs. uniprot
Match: A0A7S3HRQ2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRQ2_9STRA)

HSP 1 Score: 132 bits (333), Expect = 5.090e-30
Identity = 90/287 (31.36%), Postives = 143/287 (49.83%), Query Frame = 2
Query:  572 TMLPLVFLNDFEITNEGTVFLSDSSWKYARRDNRRELIDGAPNGRLLRFEPSSGDLHTVVCGLHFPNGVE------------------VDPSG-----------------KKLMLVESSRFRVLEVD-------LQALSSDARPSASLTDALRFCGEEEA---LPDGVRIFADALPGFADNLVFD-----ETNGGYVVAAGTKVAAPFSPLHLALKKPGVFRSILGKLVPMGILDKLAPSYGLVFVLGLDGTVKESMHDATGRTAFVSTARRNSKSGYTFLGSSQNP 1282
            T  PL F ND +I+ +G V  +DSS ++ R +NR E++DGAP GRL +++P +  +  ++CGLHFPNGV+                  V+  G                 +++++ E +RFRVL+V+       + +L++       L  AL      E+      GV  F   +PG  DN+  D     +    Y+   G+K  APFS L   L+   + R I+ ++VPM +++KL P YGLV V   +G +  ++HD +G  A +S A R+  +G  +LGS   P
Sbjct:  200 TKTPL-FFNDLDISLDGKVVFTDSSDRHTRSNNRPEILDGAPRGRLFQYDPVTQGVSLLLCGLHFPNGVQFLAPKVEYHTETVYVAGTVNEEGVAGPGTTEERTVEKVVQQEVLVNELTRFRVLKVNTHKVLSNVASLTASCEEDGGLYQALAMNAHTESENYAITGVTTFIPNIPGLVDNVRRDTKLSKDGKEYYLFGLGSKSTAPFSLLWTVLQS-NLLREIIERVVPMKLVEKLVPRYGLVLVANDEGELINALHDPSGGVAMLSQASRHPLTGDLWLGSHSEP 484          
BLAST of mRNA_P-fluviatile_contig9.15021.1 vs. uniprot
Match: UPI001EE5BF92 (LOW QUALITY PROTEIN: adipocyte plasma membrane-associated protein-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5BF92)

HSP 1 Score: 124 bits (311), Expect = 1.600e-27
Identity = 74/238 (31.09%), Postives = 127/238 (53.36%), Query Frame = 2
Query:  590 FLNDFEITNEGTVFLSDSSWKYARRDNRRELIDGAPNGRLLRFEPSSGDLHTVVCGLHFPNGVEVDPSGKKLMLVESSRFRVLEVDLQALSSDARPSASLTDALRFCGEEEALPDGVRIFADALPGFADNLVFDETNGGYVVAAGTKVAAPFSPLHLALKKPGVFRSILGKLVPMGILDKLAPSYGLVFVLGLDGTVKESMHDATGRTAFVSTARRNSKSGYTFLGSSQNPYLGRVRL 1303
            FLND +I ++GT++LSDSS ++ RR+NR  +++   +GR++ F P++ ++  ++ GL F NGV++   G+ L++ E+++ R+    L+   +               G++E       +F D LPG  DN+  +     +V  A  + A  FS L     KP + RS++ K+V    +  + P YGL+  +   G + +S+HD TG T   S +    K G  +LGS   P+L R+RL
Sbjct:  195 FLNDLDIGSDGTIYLSDSSTRWGRRENRYCIMEAEESGRVMSFNPTTREMTVLMDGLAFANGVQLSSDGEFLLVCETTKARIWRYWLKGPKT---------------GQKE-------VFMDNLPGLPDNIRRNRRGTYWVGLATVRRADKFSMLDFTCDKPWL-RSLITKIVSQETIVSVIPKYGLLLEVDKTGQIVQSLHDPTG-TVVPSVSEAEEKDGVIYLGSYNLPFLSRLRL 408          
BLAST of mRNA_P-fluviatile_contig9.15021.1 vs. uniprot
Match: A0A8B8DSV9_CRAVI (adipocyte plasma membrane-associated protein-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DSV9_CRAVI)

HSP 1 Score: 123 bits (308), Expect = 4.260e-27
Identity = 69/237 (29.11%), Postives = 127/237 (53.59%), Query Frame = 2
Query:  593 LNDFEITNEGTVFLSDSSWKYARRDNRRELIDGAPNGRLLRFEPSSGDLHTVVCGLHFPNGVEVDPSGKKLMLVESSRFRVLEVDLQALSSDARPSASLTDALRFCGEEEALPDGVRIFADALPGFADNLVFDETNGGYVVAAGTKVAAPFSPLHLALKKPGVFRSILGKLVPMGILDKLAPSYGLVFVLGLDGTVKESMHDATGRTAFVSTARRNSKSGYTFLGSSQNPYLGRVRL 1303
            LND  +  +GTV+++DSS K+ RR NR ++++G  +GR+L ++P SG++  ++  + F NG+++  SG+ L++VE++R R+L+  L+     +                      + +  + LPG  DN+    + G ++  A  +    FS +     KP + RS++ K+V M ++ +  P YGL+  +  +G V  S+HD TG+    + +    K G  +LGS   P++GR+ L
Sbjct:  195 LNDLTVAEDGTVYMTDSSVKWDRRHNRHQIMEGEVSGRVLVYDPKSGEVTELINSMSFANGIQLTRSGEALLIVETARARLLKYHLKGPKKGS----------------------LEVINNNLPGIPDNIRPSSSGGYWIGMALIRKENKFSIMDYGADKPWL-RSLIMKIVSMDLVLQYLPKYGLIVEVNEEGQVVRSLHDPTGQV-IPAVSEVEDKEGVLYLGSYNLPFMGRLYL 407          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15021.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHN1_9PHAE4.710e-13774.19Str_synth domain-containing protein n=1 Tax=Ectoca... [more]
D7FPD7_ECTSI4.010e-8077.19Chromosome 20 open reading frame 3 n=1 Tax=Ectocar... [more]
A0A835YS31_9STRA2.260e-6145.65Str_synth domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2V5T4_9STRA3.280e-5641.18Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2V6X8_9STRA1.230e-5241.18Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A482SBF4_9ARCH1.100e-4239.45Str_synth domain-containing protein n=1 Tax=archae... [more]
A0A4D9CLY3_9STRA1.120e-3836.65Str_synth domain-containing protein n=3 Tax=Monodo... [more]
A0A7S3HRQ2_9STRA5.090e-3031.36Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
UPI001EE5BF921.600e-2731.09LOW QUALITY PROTEIN: adipocyte plasma membrane-ass... [more]
A0A8B8DSV9_CRAVI4.260e-2729.11adipocyte plasma membrane-associated protein-like ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:204228..208896 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score256.5
Seed ortholog evalue1.2e-65
Seed eggNOG ortholog2880.D7FPD7
Preferred nameYLS2
KEGG koko:K21407
GOsGO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006950,GO:0008150,GO:0009605,GO:0009607,GO:0009611,GO:0009615,GO:0009620,GO:0009719,GO:0009723,GO:0009725,GO:0009751,GO:0009753,GO:0010033,GO:0012505,GO:0014070,GO:0016020,GO:0016787,GO:0016788,GO:0042221,GO:0042493,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051704,GO:0051707,GO:1901700
EggNOG free text desc.strictosidine synthase activity
EggNOG OGsCOG1185@1,KOG1520@2759
Ec32 ortholog descriptionSix-bladed beta-propeller, TolB-like
Ec32 orthologEc-14_004550.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Exons7
Model size1485
Cds size732
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817306.373555-UTR-P-fluviatile_contig9:204227..2044061622817306.373555-UTR-P-fluviatile_contig9:204227..204406Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 204228..204406 -
1693572005.5386305-UTR-P-fluviatile_contig9:204227..2044061693572005.5386305-UTR-P-fluviatile_contig9:204227..204406Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 204228..204406 -
1622817306.4693341-UTR-P-fluviatile_contig9:208322..2088961622817306.4693341-UTR-P-fluviatile_contig9:208322..208896Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 208323..208896 -
1693572005.8343892-UTR-P-fluviatile_contig9:208322..2088961693572005.8343892-UTR-P-fluviatile_contig9:208322..208896Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 208323..208896 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817306.3857305-CDS-P-fluviatile_contig9:204406..2045721622817306.3857305-CDS-P-fluviatile_contig9:204406..204572Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 204407..204572 -
1693572005.5513015-CDS-P-fluviatile_contig9:204406..2045721693572005.5513015-CDS-P-fluviatile_contig9:204406..204572Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 204407..204572 -
1622817306.3964643-CDS-P-fluviatile_contig9:205012..2050831622817306.3964643-CDS-P-fluviatile_contig9:205012..205083Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 205013..205083 -
1693572005.559822-CDS-P-fluviatile_contig9:205012..2050831693572005.559822-CDS-P-fluviatile_contig9:205012..205083Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 205013..205083 -
1622817306.4078805-CDS-P-fluviatile_contig9:205909..2060131622817306.4078805-CDS-P-fluviatile_contig9:205909..206013Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 205910..206013 -
1693572005.5710747-CDS-P-fluviatile_contig9:205909..2060131693572005.5710747-CDS-P-fluviatile_contig9:205909..206013Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 205910..206013 -
1622817306.4203024-CDS-P-fluviatile_contig9:206617..2068011622817306.4203024-CDS-P-fluviatile_contig9:206617..206801Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 206618..206801 -
1693572005.775904-CDS-P-fluviatile_contig9:206617..2068011693572005.775904-CDS-P-fluviatile_contig9:206617..206801Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 206618..206801 -
1622817306.4323277-CDS-P-fluviatile_contig9:207129..2072311622817306.4323277-CDS-P-fluviatile_contig9:207129..207231Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 207130..207231 -
1693572005.7950218-CDS-P-fluviatile_contig9:207129..2072311693572005.7950218-CDS-P-fluviatile_contig9:207129..207231Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 207130..207231 -
1622817306.4456685-CDS-P-fluviatile_contig9:207557..2076161622817306.4456685-CDS-P-fluviatile_contig9:207557..207616Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 207558..207616 -
1693572005.8104045-CDS-P-fluviatile_contig9:207557..2076161693572005.8104045-CDS-P-fluviatile_contig9:207557..207616Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 207558..207616 -
1622817306.4581563-CDS-P-fluviatile_contig9:208276..2083221622817306.4581563-CDS-P-fluviatile_contig9:208276..208322Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 208277..208322 -
1693572005.823366-CDS-P-fluviatile_contig9:208276..2083221693572005.823366-CDS-P-fluviatile_contig9:208276..208322Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 208277..208322 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15021.1prot_P-fluviatile_contig9.15021.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig9 204407..208322 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig9.15021.1

>prot_P-fluviatile_contig9.15021.1 ID=prot_P-fluviatile_contig9.15021.1|Name=mRNA_P-fluviatile_contig9.15021.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=244bp
MLPLVFLNDFEITNEGTVFLSDSSWKYARRDNRRELIDGAPNGRLLRFEP
SSGDLHTVVCGLHFPNGVEVDPSGKKLMLVESSRFRVLEVDLQALSSDAR
PSASLTDALRFCGEEEALPDGVRIFADALPGFADNLVFDETNGGYVVAAG
TKVAAPFSPLHLALKKPGVFRSILGKLVPMGILDKLAPSYGLVFVLGLDG
TVKESMHDATGRTAFVSTARRNSKSGYTFLGSSQNPYLGRVRL*
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mRNA from alignment at P-fluviatile_contig9:204228..208896-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig9.15021.1 ID=mRNA_P-fluviatile_contig9.15021.1|Name=mRNA_P-fluviatile_contig9.15021.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4669bp|location=Sequence derived from alignment at P-fluviatile_contig9:204228..208896- (Porterinema fluviatile SAG_2381)
CGTGGCGGCAAGCTGTACATTCTCGACGCCTACCACGGGCTGTTCGAGTT AGAGGTCGCGAAGGGCGGGCGCGGCAGACACTTGGTGTGTATTTACGCTG CTGCTGCCACAGGTCTCGGCTGGGGACTGAAGTGACGAGGCGCCAGTGCA TGCACTGGACCAGCGCCAAGATTGGGAATTGTTATTTTGCACGTTCTGTT TCCGTGTCCACGCCTGGCTTTGGTCCAGCACAAAACTTGTCGGTAGGGAG GGCATGGTTCGCACCGTCATGAAGCTCCTCCCTTTAGTGAGTCGTGTTTG ACGCTCGTTACTTTGCGCCCTCTTCTCACCCGCATCATGTCTGAGAGAGC GGTCATGATTACGATGCGCATAGTGCGAAGGCGATGGTGACGGACGGTGC ATCCCCCTACAGATCACTCCATCTGCCGCTGGACGACTCGCGCGGAATAC CCCACCCTTCTGTTGTACTGCATCGTTGATACTGCATCGTTTTCTTCTCG AGATAAATTCCTTGACGGACTTGCCACGCCCTCTCGGCGGCGAAGCGGCG ACGGTGGCGGCGGCACCGGAGACGATGCTTCCTCTAGTCTTCCTCAACGA CTTCGAAATCACCAATGAAGGTGAAGTTCGCTGCTGTGCCGTGCCAACAG CGGTTTGTGATTTGTGTGCGGGCAGAAAGAATATGGGGCGCTGCCTTGCT GCGGACACGATTGCGATTGCGGTTGGCCATCGGTGCCGTCGGCAACCCTT TCGACGCCCCACTGCCGGGTGTTCATTTTGATTTTGTCTCTGGTGTAATC GGCAGATAGATGAAGAGGTAGCTCCCGCCAGTGATCGTCCGGTCCGCCAA TACGAGGGCGTCGACCGTTCAATGTCGTGGTCCGCTTTGCGACAAAAAGG TTTTCGAACGACGACGCTCGGCCGCTTCGCGTGCACTTCTGTTTTGCTTT TCATAAACCGCCCTGCGCGGCTGCCGCTCCGAAGGTTAGTCCCCTGCCGG CGGTCGGCCTCTGCATTATCGTGGGCACGCTCTAGCGGATTGATCCAGGG ACGTTGTGTTTTCGCAAGTGTCATGCTACTGCGTAGGCGTGGAAAGTTTT GAATATGTTTGGCCCGACGCATGCGACAAGACGCTTAGACCCATACGAGC CGCTCCTCTTACCACGCTCCTCGCGCAAACTGGGTGACACGCCGCTACTC TACGCAACGGCCGCTTCATCGGATTGGGTCCGCGGACGACGACGCTGCCA TTCATGCTGCTGCTGTCCGCGATGCAAAAGGCACGGTTTTCTTGTCGGAT AGCAGCTGGAAATACGCCCGAAGAGATAACCGGCGAGAAGTGAGTCGGTG TGTCGTTACGGTTGGTCGGCCTGTGCTGTTGTTGCTGGTGTCGCCGCCGC TAGGGCGATGATGAAATATCGTGCGTTCGCCACAAAAGAAACAGTAAAGG CCTGAGCGCTGGGGCACTCTTTTTCTTTTTGCACGCGATGGAACGTGTTT CCGTCGGGGCACCTCAAACAGTTTTGTGCGTGGTTGTTTGCCTCTTGCGC CGTCTTGAAAGCCGTCTTTTGCTCTCGATCCGCGTCAACAGGGTAGTGCC ACATTCACAGTCATCCTTTTCATTTAAGCTCAGCGTGCTCGTCTCTCTGT CGTGACGCTCGACAGCTCATCGACGGCGCCCCCAACGGTCGGCTGCTGCG GTTCGAGCCCAGCTCAGGGGATCTTCACACCGTCGTGTGCGGGCTGCACT TTCCCAACGGGGTGGAGGTACACCGAAAGACACAACCCTGCGATGGTTTA AAGTATGCGTGGCATCAGAGGCCCCGTGCGAAGCCTTGCGTAGGCCAATT GAGCGAGCACCCGCGCGTACGTCCCGACGATCAGCTGCACCACGAGGGAG TTGCATCACTCTTCAGGCAAAATTTAGCACGCCTTCATGGATCGACCCTG GATAAGGCGGAAATTTTGCGAAACTCACCCCACGCGCCCAACGGCTCGCT CGCCAAAACCCATCCTCGACATGTGCTCACTACCATCGTGGTTGTCTCTT CTAAAATGCAAAACGCGGCACCGGTGACGAACACTCCACAAAAAGGTTGA TCCCTCCGGCAAAAAGCTGATGCTCGTCGAGTCTTCGCGTTTCCGGGTCT TGGAGGTAGATCTCCAGGCGCTGTCGTCTGACGCACGCCCTTCCGCGTCG CTGACCGACGCGCTGAGGTTTTGCGGGGAAGAGGAGGCCCTGCCCGACGG CGTTCGCATCTTTGCGGACGCCCTGCCAGGTACGCGCGCATGCAGGGCCA TGTTGATCAAGGTGGTTTGTCGGGCCCGTAAGCCAGCCTTGAGAGTGCGC GTAAACACTCCCGGAGACCATGCGCAACGGGCAGCGGGGGGGGGGTCGCT GTGAGTTTGTTGGAAGACATTCAGATAGAAGCGCTGTGTAGAGTGGGGGT AGTGATGTCTATAGCTTACCTCTGCTCGTCCACCCCAAAGTGTTGTCTCG CAGTTCAGGCGCGTATGTGACTTGCATTTCATAATGGCCACGGACACAAG AGCTGATGGAAACAAAAAGCTACAGCTCGACGCACAAGCGGGCAGTCAAC TCAGGTTTAGCGCGTTGAAGAATCGGTACAATCCTCGCGAAGAGTCAACC ACGGCGATTAAAAAGTAAACCCGCTTTTCCTGTCACTTTCTGCACTTGCG TCTTCGCTCCGAATTTCCGGGCGTATGTTCACGTGATGCGCCGCGAAAAA ACTCACATCTGCATTCACGTAGTTTACCTGTTGGTGTTCGCATTATTGAT CGTTGCGTGCTAATGCACGCCTCGGTAAACGTCTTTCGCCACCACCGCCT AACCATGCATTTCGCCGACGATGGTCGCCGCAGGCTTCGCGGACAACCTG GTTTTCGATGAGACAAATGGTGGATACGTCGTTGCGGCCGGCACCAAGGT GGCCGCGCCCTTCTCCCCCTTACACCTTGCCCTGAAGGTGCGGCCGCGAC CGGCGGACGAAACCCCGTTCGGGCAAAAAAACACTAAAGAACCGAAAAGG GCTTTCGATTGGCAGCGAGAGAGAACTAGAAAGGATGTTCGGGAAGGACT CCCAATCGAGACAAATATGGCGGTCGGGTGGAGGCGGGGGAGAGTCAGCA GTCAGGGTACAACAGACTCGGAAAATCTGTAGAAAGGATGGCGCGCGGTC AGATGACACTTGAGCTCCGAAGAAGCGTGTGTTTGGGATACTAGGCTGGC GCGCAGATCGACGTTTAATGTTTAATGCCCTGCAGGTCAAGTAGTCCATC GGCAAGCGAACACTCGCAGACCCGCCCCGTCTGGCCGGCGACAAGCAATC ACGATTTACGTATGACGCCGCGTAGCTGTTATTCTTCGCGAGTATTTTCG TCTTTGCCAAACCAAGCACCAGGTGAAGAATTCGTACCATGCTTCTTTTC AATGTCCCTTTTGTTCCGCGACGTCCGATTTGTATGGAATTGCATTAAAC TTATGCTTGCATATTTTGTTTTGCTCAGCTGGCAGACAAGGGGGTTGTCT CAATCCCTTTTCTCTTTCCCCCTTCAACCAATTTCTTCTTCTCCGCCACT GCTGGTCTTGTGTTTTATCGGATATCTGGGGTCTTCCAAGGGAGACATCG TGGCATTATTGTGCGAGGGCAAGGAAATCCATCGACCACATGCTTTCAGG AACCAATCACATCACCTGTATTCCCGTTTGTTGACCACGTGACGCTGCCC ATTGCCCCTACAACCATCGCCTTCGTACATGCTGACTCGGACACGCACGC CCCCTGTTTGCAGAAACCCGGGGTTTTCAGAAGTATACTCGGCAAGCTCG TTCCCATGGGGATCCTGGACAAGTTGGCGCCGAGGTGAACGTCTTTTTGT TTCGCGTTGTTCGCGAGAACACCCGAAGCATCGCTAGGGAAGGCGATTCG CCTTCTAAGAAGTGATCGAAATTGCCTATTGCCGAGGGTCCATTTTTGAC AAAGGGGGCGAGGGGCATATTCCTACGCGATAGCCGAGCGGCGACCAACA GATGAGCTCCTCCCCCCCCAAATTGCACCGGTGTTTCATGTTAGAAGTAA ATATCCTGAAAAAATACCTTTAAGCCCTCACCTTCCAATACCAAATAGTA AGACCAATCGAGAAACGGTCGCCTATTCCTCTGCCCATCCGCAGCCTCAT CAGCCGATTGTTATTTGAGTGCGTGTCGTGACCCGCCACCCTGCCACCTT ACATGCCCCCCACTCCCCCGATCGCTCCGCCCGTATTTTACCCGTCGGCT CTTGAATACGCCGCACTGAACAAGCTACGGCCTGGTTTTTGTGCTCGGGT TGGACGGCACCGTGAAGGAGAGCATGCACGATGCGACAGGACGGACGGCG TTCGTGAGCACCGCTCGACGGAACTCCAAGAGCGGCTACACGTTCCTCGG GTCGAGCCAAAACCCCTACCTCGGTCGCGTTCGGTTGTGATGTTTTGGTC GGTGGACCTGTCAATTGTTCGGTCTCCCCCGACCAATGTTACGTGTTTGC ACGATTTATCAGAGGTGCGTGGCTCGCTCCCTGTGATTTTTCATTCTTTT CCTCTGTCGGAGCGGCGCGCGCGCCGTGCCAGGTGTGGCGTGGGTGGCTG GAGCGTGCCGAACGCGGTG
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Coding sequence (CDS) from alignment at P-fluviatile_contig9:204228..208896-

>mRNA_P-fluviatile_contig9.15021.1 ID=mRNA_P-fluviatile_contig9.15021.1|Name=mRNA_P-fluviatile_contig9.15021.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1464bp|location=Sequence derived from alignment at P-fluviatile_contig9:204228..208896- (Porterinema fluviatile SAG_2381)
ATGCTTCCTCTAGTCTTCCTCAACGACTTCGAAATCACCAATGAAGATGC
TTCCTCTAGTCTTCCTCAACGACTTCGAAATCACCAATGAAGGCACGGTT
TTCTTGTCGGATAGCAGCTGGAAATACGCCCGAAGAGATAACCGGCGAGA
AGCACGGTTTTCTTGTCGGATAGCAGCTGGAAATACGCCCGAAGAGATAA
CCGGCGAGAACTCATCGACGGCGCCCCCAACGGTCGGCTGCTGCGGTTCG
AGCCCAGCTCAGGGGATCTTCACACCGTCGTGTGCGGGCTGCACTTTCCC
AACGGGGTGGAGCTCATCGACGGCGCCCCCAACGGTCGGCTGCTGCGGTT
CGAGCCCAGCTCAGGGGATCTTCACACCGTCGTGTGCGGGCTGCACTTTC
CCAACGGGGTGGAGGTTGATCCCTCCGGCAAAAAGCTGATGCTCGTCGAG
TCTTCGCGTTTCCGGGTCTTGGAGGTAGATCTCCAGGCGCTGTCGTCTGA
CGCACGCCCTTCCGCGTCGCTGACCGACGCGCTGAGGTTTTGCGGGGAAG
AGGAGGCCCTGCCCGACGGCGTTCGCATCTTTGCGGACGCCCTGCCAGGT
TGATCCCTCCGGCAAAAAGCTGATGCTCGTCGAGTCTTCGCGTTTCCGGG
TCTTGGAGGTAGATCTCCAGGCGCTGTCGTCTGACGCACGCCCTTCCGCG
TCGCTGACCGACGCGCTGAGGTTTTGCGGGGAAGAGGAGGCCCTGCCCGA
CGGCGTTCGCATCTTTGCGGACGCCCTGCCAGGCTTCGCGGACAACCTGG
TTTTCGATGAGACAAATGGTGGATACGTCGTTGCGGCCGGCACCAAGGTG
GCCGCGCCCTTCTCCCCCTTACACCTTGCCCTGAAGGCTTCGCGGACAAC
CTGGTTTTCGATGAGACAAATGGTGGATACGTCGTTGCGGCCGGCACCAA
GGTGGCCGCGCCCTTCTCCCCCTTACACCTTGCCCTGAAGAAACCCGGGG
TTTTCAGAAGTATACTCGGCAAGCTCGTTCCCATGGGGATCCTGGACAAG
TTGGCGCCGAGAAACCCGGGGTTTTCAGAAGTATACTCGGCAAGCTCGTT
CCCATGGGGATCCTGGACAAGTTGGCGCCGAGCTACGGCCTGGTTTTTGT
GCTCGGGTTGGACGGCACCGTGAAGGAGAGCATGCACGATGCGACAGGAC
GGACGGCGTTCGTGAGCACCGCTCGACGGAACTCCAAGAGCGGCTACACG
TTCCTCGGGTCGAGCCAAAACCCCTACCTCGGTCGCGTTCGGTTGTGACT
ACGGCCTGGTTTTTGTGCTCGGGTTGGACGGCACCGTGAAGGAGAGCATG
CACGATGCGACAGGACGGACGGCGTTCGTGAGCACCGCTCGACGGAACTC
CAAGAGCGGCTACACGTTCCTCGGGTCGAGCCAAAACCCCTACCTCGGTC
GCGTTCGGTTGTGA
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