mRNA_P-fluviatile_contig9.15264.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig9.15264.1 vs. uniprot
Match: D7G8I9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8I9_ECTSI) HSP 1 Score: 487 bits (1253), Expect = 9.510e-142 Identity = 563/1324 (42.52%), Postives = 659/1324 (49.77%), Query Frame = 1
Query: 964 SQRQQPGVTCLAASLETLAMQSSPAGAA-ASFDPKAGKKRGRGCATPGA----------------AG----RGRYPTTFGGGPVDPAELTKGFCRFVAAYTAQDLPLDALRRLLEAAPSSVGQKQVAEADDDWEGTRPPP-QSAAVESAGEQN-PGTVDQSVSPEPV--PAAAAATTLPTFPAXXXXXXXXXXXXXXXXXTTPESTILAVKPTTSRREMLDARKAQQKERDRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARNPPVGEA----VPDAAVVLSSTVLRLQRXXXXXXXXXXXXGNAEKIQKQPREAEGRKEVLRVRNVKSRRAKHVPTQXXXXXXXXXXXXXXXXXXXXXXXXTAASGDTHVSADSAGEQQCFTTTAFGAKVVQPLKEAGALRTASATAAPAKNGDNDEMAG-VVEEVPMPTGDIDDGFFCSDFGMGGXXXXXXXXXXGEGSGRG--GYEVASHWSFMPYGSPCA--SESSTASDAARGEKSKKGRGRPRKVVAVAECAKVEGSAETENSGVGESSEGGDGVGGKKKRR----RSMRPIRAPIKFGSEEFQALGAPSNEPNQDHPDRPAPKLE-TLGDAATSGVDHDSRCVVAPAPTSRTRPTNKDNAAAAXXXXXXSSAARIAPAARCVGVQHHALPAKRRTTVSAFNPKRENIRTVRARAGGLSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGAQAWGTSDSSXXXXXAEATGTEAATWSKNAIFSTAAVAKRAVESLFDTVALELSTAKQGLGPAAATTTASDSKVQAXXXXXXXXXXPAAGGARVCKPKXXPAVAPVAM------ECVLPFGSDITDGVCTRDIVEAASSRSWLSGGRAVAAAAAMEGPRGALTAALATAQVLMDKYVRVAGSGSF-SPVLPEEMRHLDSLLTAIVATEACAMRHELQAAAEAGETASVGVGGQATAAVAAPAAGREMA----------------KRVRFCAFDLSTVDMPSEAIQDSDLAAKEVSQCLARVAASSKLILEALLKRGGGSGA------------GGGLAAVLEAIMRGLKTVAAVDEPWSSPLVAGAQAACHEFGGEVSPDVIRRAAAFLLESMQSLGSGAEVAA-RCPLKRRLATMLSALIRYNLRILLNPPPPKSVSSLYIADSTDRPRKVYEVIQLVSDNVKPANKRDVFDPSRDETTSAVVSRALRRLYGFTDRGAVEVIAAAEAFVASTASWN-DLSG-RDKTLEARRHSRDTVDIVAAIRARNFLLELLEFPGVESAISQAQGWGELERLCTELRQVE 4704
S R++ V LAASLE LA S A S P GKKRGRG ATPG AG RG T GG V+ ELTKGFC F+AAYTAQ LPLDAL L++ PS+ G+ V +D G PPP + A E A +++ T + P + P XXXXXXXX T PES + +PTT+RREML+AR+A+ KER+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +P+AA V A AA A D DE+ G VVEEVPMP GDIDDGFFC+D G G G GY + WS GS A S R RK AV E + G+ E E GD GK+ RSMR ++AP+KFG EE A G S EP D APKLE TL A SG +S S + DNA+ V H V GG +A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++I +TA AK AV+ LFDT L+LS A TA + GG R K K A VA+ E +LP+G+++TDGV +DI EAASSRSWL G A GPRGALT LATA+VLM K + S S V PE MR +S LTAIVATEACAM+HEL+A EAGET P+AG +A K VRFCAFDLSTVDMP++AI+DSD AAKEV+QCLARV ASSKL+ E + KR G+G GGGLA+V++A MRGLKTVA V EP S PLVA A+ AC E G E+S +V++RAAA LLES ++L GAEVAA RCPL++RLA MLSALIR+NLR LLNPPP KS+SSL+IADSTD+PRKV+EVI LVS+ KPA+K+D FDP+RD SAV+SRALRRLY F+D AVEV++ AEAFVA N DL G +K AR HS+ TVDIVAAIRARNF+LELLEFPGVE A+SQA+GWGELERL TELR+ +
Sbjct: 254 SLRRRSDVLSLAASLEALAAGGSAARTTDTSSQPTTGKKRGRGSATPGIGPRTTAVEPTDEATAPAGAQCRRGGGTTGGVGGYVELPELTKGFCGFLAAYTAQGLPLDALVGLIQTTPSAGGRGGVDNSDGVERGDMPPPPRVTATERAKKKSREATAVKLGKPTALVLPXXXXXXXXXXXXXXXXXXXXXPADAAAAMTTPPESVVPTARPTTTRREMLNARRAE-KEREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPNAASV----------------------------------------------------------------------------------------------------------------------------HAVAAAAATTDLDEVGGAVVEEVPMPAGDIDDGFFCADVGGVGGSNSVGLIVGGXXXXXXXDGYGMVGAWSHQADGSIAAVGSXXXXXXXXXXXXXXXXXXXRSRKPEAVVEPLNM-GARSVEGG------ESGDEGSGKESXXXXXXRSMRLVKAPVKFGDEEPGAGGPLSPEPKLDQSKGLAPKLEPTLAGTAASGQGSES---------SGRDSCSVDNAS----------------------VSH-----------------------VPFSEGGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPT-------------------------------------DSISATATAAKMAVDDLFDTAVLQLSAATXXXXXXXXXKTAVSGGGREKARGGCAGEGVPTGGERASKAKPNAREAEVAVTEAVVAERLLPYGAEVTDGVTAKDIFEAASSRSWLGDG-----GGADGGPRGALTGVLATARVLMQKASGPGRASSLQSAVPPEAMRQFESFLTAIVATEACAMKHELRAGTEAGETVP-------------PSAGAGVAXXXXXXXXXXXXXXXXKGVRFCAFDLSTVDMPTDAIEDSDAAAKEVAQCLARVVASSKLLQEGMPKRASGAGGAGKAAAVADGGIGGGLASVVKAFMRGLKTVAGVAEPDSCPLVASARGACRELGTEISTEVVKRAAALLLESFEALEGGAEVAATRCPLRQRLAIMLSALIRFNLRTLLNPPPHKSLSSLHIADSTDKPRKVHEVILLVSEESKPASKKDAFDPTRDGAASAVLSRALRRLYEFSD--AVEVMSRAEAFVADMKGKNRDLYGDEEKASRARLHSQSTVDIVAAIRARNFVLELLEFPGVELAVSQARGWGELERLSTELRKAD 1334
BLAST of mRNA_P-fluviatile_contig9.15264.1 vs. uniprot
Match: A0A6H5LA33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA33_9PHAE) HSP 1 Score: 387 bits (995), Expect = 6.450e-107 Identity = 519/1299 (39.95%), Postives = 617/1299 (47.50%), Query Frame = 1
Query: 964 SQRQQPGVTCLAASLETLAMQSSPAGAA-ASFDPKAGKKRGRGCATPGAAGRG---------RYPT-----------TFGGGPVDPAELTKGFCRFVAAYTAQDLPLDALRRLLEAAPSSVGQKQVAEADDDWEGTRPPPQS--------------AAVESAGEQNPGTVDQSVSPEPVPAAAAATTLPTFPAXXXXXXXXXXXXXXXXXTTPESTILAVKPTTSRREMLDARKAQQKERDRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARNPPVGEAVPDAAVVLSSTVLRLQRXXXXXXXXXXXXGNAEKI-----QKQPREAEGRKEV--LRVRNVKSRRAKHV-----PTQXXXXXXXXXXXXXXXXXXXXXXXXTAASGDTHVSADSAGEQQCFTTTAFGAKVVQPLKEAGALRTASATAAPAKNGDNDEMAG-VVEEVPMPTGDIDDGFFCSDFG-MGGXXXXXXXXXXGEGSGRGGYE--VASHWSFMPYGS--PCASESSTASDAARGEKSKKGRGRPRKVVAVAECAKVEG-SAETENSGVGESSEGGDGVGGKKKRRRSMRPIRAPIKFGSEEFQALGAPSNEPNQDHPDRPAPKLE-TLGDAATSGVDHDSRCVVAPAPTSRTRPTNKDNAAAAXXXXXXSSAARIAPAARCVGVQHH-------------------------------------------------ALPAKRRTTVSAFNPKRENIRTVRARAGGLSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGAQAWGTSDSSXXXXXAEATGTEAATWSKNAIFSTAAVAKRAVESLFDTVALELSTA----------------------KQGLGPAAATTTASDSKVQAXXXXXXXXXXPAAGGARVCKPKXXPAVAPVAMECVLPFGSDITDGVCTRDIVEAASSRSWLSGGRAVAAAAAMEGPRGALTAALATAQVLMDKYVRVAGSGSF-SPVLPEEMRHLDSLLTAIVATEACAMRHELQAAAEAGETA--SVGVGGQATAAVAAPAAGREMAKRVRFCAFDLSTVDMPSEAIQDSDLAAKEVSQCLARVAASSKLILEALLKRGGGSGA------------GGGLAAVLEAIMRGLKTVAAVDEPWSSPLVAGAQAACHEFGGEVSPDVIRRAAAFLLESMQSLGSGAEV-AARCPLKRRLATMLSALIRYNLRILLNPPPPKSVSSLYIADSTDRPRKVYEVIQLVSDNVKPANKRDVFDPSRDETTSAVVSRALRRL 4434
S R++ V LAASLE LA S A A S P AGKKRGRG ATPG R PT + GGG V+ ELTKGFC F+AAYTAQ LPLDAL RL++AAPS+ G+ V D G PP AAV+ G SV P P A XXXX X T PES + +PTT+RREML+AR+A+++ R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX Q+Q R+E LR N KS+R K V P Q A+S S+D+A + L A ++ +A AA D+DE+ G VVEEVPMPTGDIDD FFC+D G +GG G + WS G+ RK AV E S E SGV EG KKKRRRSMR ++AP+K G EE A G S EP D PKLE TL A G + R ++ DNA+ + A A P +R + N + IR R R G +A XXXXXXXXXXXXX S + TSD XXXXX +I +TA AK AV+ LFDT ++ G A + XXXXXXXXXX A+ + V E +LP+G+++TDGV RDI EAASSRSW+ G + A GPRGALT LATA+VLM K G+ S S V PE MR +S LT IVATEACAM+HEL+A EAGET S G G A AA AA + K VRFCAFDLSTVDMP++AI+DSD AAKEV+QCLARV ASSKL+ E + KR G+G GGGLA+ ++A MRGLKTVA V EP S PLV+ +AAC E G E+S V++RAAA LLES ++L GAEV A RCPL++RLA MLSALIR+NLR LLNPPP KS+SSL+IADSTD+PRKV+EVIQLVS+ KPA+K+D FDP+RD SAV+SRALRR+
Sbjct: 249 SLRRRSDVLSLAASLEALAAGGSAARTADTSSQPTAGKKRGRGSATPGTGPRTIAVEPTNETTAPTGAHSRRAGGTASGGGGCVELPELTKGFCGFLAAYTAQGLPLDALVRLIQAAPSTGGRGGVDNNDGVERGDVPPXXXXXXXXXXXXXXXXXAAVKQ------GKTADSVLPPP----AXXXXXXXXXXXXXXLSAAPADAAXAMTTPPESVVATARPTTTRREMLNARRAEKEREARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVPSISQEQXXXXXXRRETKPLRAHNTKSKRVKPVKQALLPQQQARQPHGQKRPVGGTEARNRKHSVNASSS----SSDAAPADE------------PELPSAASVHAVAAAAAVT---DHDEVGGAVVEEVPMPTGDIDDRFFCADVGGVGGSNSVGLIMGGGXXXXXXXXXXXMVGAWSHQGGGAIXXXXXXXXXXXXXXXXXXXXXXXXXSRKPEAVVEPLNTGARSVEGGESGV----EGSGKESEKKKRRRSMRLVKAPVKLGDEEPGAGGPRSPEPELDQRKGLVPKLEPTL--AIGQGSESSGR-----------EASSVDNASVSHAPFSEGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPPFAKRKPAALANSTKW-IRANRFRGGATAATXXXXXXXXXXXXX--------------------------------SRESHPKATSDFXXXXXXXX----XXXXXXXXSISATATAAKMAVDDLFDTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXREKARGGCAGVGVPAXXXXXXXXXXXXXXXXEASKAKPNAREVEVAVTEAVVAERLLPYGAEVTDGVTARDIFEAASSRSWVGDG-----SGAEGGPRGALTGVLATARVLMQKASGPGGASSLQSSVPPEAMRQFESFLTTIVATEACAMKHELRAGTEAGETVPPSAGAGAAAGTVAAAKAAEGKKKKGVRFCAFDLSTVDMPTDAIEDSDAAAKEVAQCLARVVASSKLLQEGMPKRASGAGGAGKAAAVADGGIGGGLASAVKAFMRGLKTVAGVAEPDSCPLVSSVRAACRELGTEISTKVVKRAAALLLESFEALEGGAEVPATRCPLRQRLAIMLSALIRFNLRTLLNPPPHKSLSSLHIADSTDKPRKVHEVIQLVSEESKPASKKDAFDPTRDGAASAVLSRALRRV 1459
BLAST of mRNA_P-fluviatile_contig9.15264.1 vs. uniprot
Match: D7FV49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV49_ECTSI) HSP 1 Score: 126 bits (317), Expect = 3.680e-25 Identity = 122/352 (34.66%), Postives = 168/352 (47.73%), Query Frame = 1
Query: 3799 VRFCAFDLSTVDMPSEAIQDSDLAAKEVSQCLARVAASSKLI------LEALLKRGGGSG--AGGGLAAVL--EAIMRGLKTVAA---------VDEPWSSPLVAGAQAACHEFGGEVSPDVIRRAAAFLLESMQSLGSGAEVAARCPLKRRLATMLSALIRYNLRILLNPPPPKSVSSLYIADSTDRPRKVYEVIQLVSDNVKPAN---KRDVFDPSR-DETTSAVVSRALRRLYGFTDRGAVEVIAAAEAFVASTASWNDLSGRDKTLEARRHSRD-----TVDIVAAIRARNFLLELLEFPGVESAISQAQGWGELERLCTELRQVEDSPDADASLTLLGEVSGLKAWL 4770
VR CAF+ STV MP + S+L A EV +CL V + I +LK GGSG + G ++ A ++ AA G Q G + + +A LL ++ L E + PL+ RLA+MLS+LIR++LRI L+ PP + + S P Y + ++ + P++ V D S D T A S+AL RL GF+ AVEV++AAEAF A A L+ RD AR S T D+V A+RAR F+L LLE GVE AI +A GWG +E + L+ ++ D D LTLL +V KAWL
Sbjct: 1479 VRLCAFNFSTVGMPLDTATGSELQALEVVRCLQGVVTALHKIENFHRRCNLVLKTTGGSGDESNGNSHRLVAWRAFQHEVRAAAANXXXXXXXXXXXXXXXXXXRGRQGRRPSAG--MKEKEMAKAGLVLLGELEPLERSPEGLVKSPLRDRLASMLSSLIRFHLRIRLDAPPERLTRAPEALPSCGDPS--YAEAKRRAEVLPPSHFSKVHTVVDVSETDATLGASFSKALFRLEGFSCEMAVEVLSAAEAFAA--ADQTRLAERDGGCPARVESAGRLLSATADVVDAVRARKFVLSLLELEGVEEAIVEAGGWGNVEMWASSLKGLKGCADIDEPLTLLSDVGAFKAWL 1824 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig9.15264.1 >prot_P-fluviatile_contig9.15264.1 ID=prot_P-fluviatile_contig9.15264.1|Name=mRNA_P-fluviatile_contig9.15264.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1653bp MFVVGEQETAAKAAVAGKRKSRRVSVAGQFRNDENVMPSTPRGHGRGRGLback to top mRNA from alignment at P-fluviatile_contig9:2414017..2424854- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig9.15264.1 ID=mRNA_P-fluviatile_contig9.15264.1|Name=mRNA_P-fluviatile_contig9.15264.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10838bp|location=Sequence derived from alignment at P-fluviatile_contig9:2414017..2424854- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig9:2414017..2424854- >mRNA_P-fluviatile_contig9.15264.1 ID=mRNA_P-fluviatile_contig9.15264.1|Name=mRNA_P-fluviatile_contig9.15264.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=9918bp|location=Sequence derived from alignment at P-fluviatile_contig9:2414017..2424854- (Porterinema fluviatile SAG_2381)back to top |