prot_P-fluviatile_contig89.14970.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig89.14970.1
Unique Nameprot_P-fluviatile_contig89.14970.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length74
Homology
BLAST of mRNA_P-fluviatile_contig89.14970.1 vs. uniprot
Match: A0A6P0NH41_9CYAN (30S ribosomal protein S12 n=53 Tax=cellular organisms TaxID=131567 RepID=A0A6P0NH41_9CYAN)

HSP 1 Score: 134 bits (336), Expect = 5.740e-39
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNL 74
            MPTIQQLIRVRR KI+ R KSPALK+CPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNL
Sbjct:    1 MPTIQQLIRVRRTKIKDRGKSPALKNCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNL 74          
BLAST of mRNA_P-fluviatile_contig89.14970.1 vs. uniprot
Match: A0A7S6U9Z3_9STRA (30S ribosomal protein S12, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9Z3_9STRA)

HSP 1 Score: 133 bits (335), Expect = 8.150e-39
Identity = 67/74 (90.54%), Postives = 71/74 (95.95%), Query Frame = 0
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNL 74
            MPTIQQL+R  RKK+Q RTKSPALK+CPQRRGVCTRV+TITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNL
Sbjct:    1 MPTIQQLVRTTRKKVQTRTKSPALKNCPQRRGVCTRVYTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNL 74          
BLAST of mRNA_P-fluviatile_contig89.14970.1 vs. uniprot
Match: A0A8E5XRI9_9PHAE (30S ribosomal protein S12, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRI9_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 3.310e-38
Identity = 67/74 (90.54%), Postives = 70/74 (94.59%), Query Frame = 0
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNL 74
            MPTIQQLIRV RKKIQPRTKSPALKSCPQRRGVCTRV+TI PKKPNSA+RKVARVRLTSGFEVTAYIPG+ H L
Sbjct:    1 MPTIQQLIRVPRKKIQPRTKSPALKSCPQRRGVCTRVYTIAPKKPNSAVRKVARVRLTSGFEVTAYIPGVDHTL 74          
BLAST of mRNA_P-fluviatile_contig89.14970.1 vs. uniprot
Match: A0A3G1IVK8_9EUKA (Ribosomal protein S12 n=3 Tax=Glaucocystophyceae TaxID=38254 RepID=A0A3G1IVK8_9EUKA)

HSP 1 Score: 129 bits (325), Expect = 2.720e-37
Identity = 65/74 (87.84%), Postives = 70/74 (94.59%), Query Frame = 0
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNL 74
            MPTIQQLIR++RKKI  +TKSPALK CPQRRGVCTRV+T TPKKPNSA+RKVARVRLTSGFEVTAYIPGIGHNL
Sbjct:    1 MPTIQQLIRLKRKKIDKKTKSPALKGCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSGFEVTAYIPGIGHNL 74          
BLAST of mRNA_P-fluviatile_contig89.14970.1 vs. uniprot
Match: K9TNW7_9CYAN (30S ribosomal protein S12 n=68 Tax=cellular organisms TaxID=131567 RepID=K9TNW7_9CYAN)

HSP 1 Score: 129 bits (324), Expect = 3.860e-37
Identity = 65/74 (87.84%), Postives = 70/74 (94.59%), Query Frame = 0
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNL 74
            MPTIQQLIR  R+KI+ +TKSPALKSCPQRRGVCTRV+T TPKKPNSA+RKVARVRLTSGFEVTAYIPGIGHNL
Sbjct:    1 MPTIQQLIRTERQKIEKKTKSPALKSCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSGFEVTAYIPGIGHNL 74          
BLAST of mRNA_P-fluviatile_contig89.14970.1 vs. uniprot
Match: A0A1X9PTY6_9RHOD (30S ribosomal protein S12, chloroplastic n=2 Tax=Rhodophyta TaxID=2763 RepID=A0A1X9PTY6_9RHOD)

HSP 1 Score: 127 bits (320), Expect = 1.570e-36
Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 0
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNL 74
            MPTIQQL+R  RKKI  +TKSPALKSCPQRRGVCTRV+T TPKKPNSA+RKVARVRLTSGFEVTAYIPGIGHN+
Sbjct:    1 MPTIQQLVRSERKKIDKQTKSPALKSCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSGFEVTAYIPGIGHNI 74          
BLAST of mRNA_P-fluviatile_contig89.14970.1 vs. uniprot
Match: RR12_CHLAT (30S ribosomal protein S12, chloroplastic n=10 Tax=Viridiplantae TaxID=33090 RepID=RR12_CHLAT)

HSP 1 Score: 127 bits (319), Expect = 2.160e-36
Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = 0
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNL 74
            MPTIQQLIR +RKK++ +TKSPAL+ CPQRRGVCTRV+T TPKKPNSA+RKVARVRLTSGFEVTAYIPGIGHNL
Sbjct:    1 MPTIQQLIRSQRKKVEKKTKSPALRGCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSGFEVTAYIPGIGHNL 74          
BLAST of mRNA_P-fluviatile_contig89.14970.1 vs. uniprot
Match: RR12_CYAPA (Cyanelle 30S ribosomal protein S12 n=2 Tax=cellular organisms TaxID=131567 RepID=RR12_CYAPA)

HSP 1 Score: 127 bits (319), Expect = 2.230e-36
Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 0
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNL 74
            MPTIQQLIR +R KI+ +TKSPALK+CPQRRGVCTRV+T TPKKPNSA+RKVARVRLTSGFEVTAYIPGIGHNL
Sbjct:    1 MPTIQQLIRSKRTKIEKKTKSPALKACPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSGFEVTAYIPGIGHNL 74          
BLAST of mRNA_P-fluviatile_contig89.14970.1 vs. uniprot
Match: A0A0P8BUW8_9CYAN (30S ribosomal protein S12 n=11 Tax=cellular organisms TaxID=131567 RepID=A0A0P8BUW8_9CYAN)

HSP 1 Score: 127 bits (318), Expect = 3.160e-36
Identity = 64/74 (86.49%), Postives = 68/74 (91.89%), Query Frame = 0
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNL 74
            MPTIQQL+R  RKK   +TKSPALKSCPQRRGVCTRV+T TPKKPNSA+RKVARVRLTSGFEVTAYIPGIGHNL
Sbjct:    1 MPTIQQLVRSERKKAHKKTKSPALKSCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSGFEVTAYIPGIGHNL 74          
BLAST of mRNA_P-fluviatile_contig89.14970.1 vs. uniprot
Match: RR12_PORPU (30S ribosomal protein S12, chloroplastic n=16 Tax=Rhodophyta TaxID=2763 RepID=RR12_PORPU)

HSP 1 Score: 126 bits (317), Expect = 4.490e-36
Identity = 62/74 (83.78%), Postives = 69/74 (93.24%), Query Frame = 0
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNL 74
            MPTIQQL+R  R+KI  +TKSPALKSCPQRRGVCTRV+T TPKKPNSA+RKVARVRLTSGFEVTAYIPG+GHN+
Sbjct:    1 MPTIQQLVRSERRKINKKTKSPALKSCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSGFEVTAYIPGVGHNI 74          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14970.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0NH41_9CYAN5.740e-3993.2430S ribosomal protein S12 n=53 Tax=cellular organi... [more]
A0A7S6U9Z3_9STRA8.150e-3990.5430S ribosomal protein S12, chloroplastic n=1 Tax=S... [more]
A0A8E5XRI9_9PHAE3.310e-3890.5430S ribosomal protein S12, chloroplastic n=1 Tax=I... [more]
A0A3G1IVK8_9EUKA2.720e-3787.84Ribosomal protein S12 n=3 Tax=Glaucocystophyceae T... [more]
K9TNW7_9CYAN3.860e-3787.8430S ribosomal protein S12 n=68 Tax=cellular organi... [more]
A0A1X9PTY6_9RHOD1.570e-3686.4930S ribosomal protein S12, chloroplastic n=2 Tax=R... [more]
RR12_CHLAT2.160e-3685.1430S ribosomal protein S12, chloroplastic n=10 Tax=... [more]
RR12_CYAPA2.230e-3686.49Cyanelle 30S ribosomal protein S12 n=2 Tax=cellula... [more]
A0A0P8BUW8_9CYAN3.160e-3686.4930S ribosomal protein S12 n=11 Tax=cellular organi... [more]
RR12_PORPU4.490e-3683.7830S ribosomal protein S12, chloroplastic n=16 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006032Ribosomal protein S12/S23PRINTSPR01034RIBOSOMALS12coord: 58..74
score: 61.39
coord: 27..42
score: 73.18
coord: 42..57
score: 86.63
IPR006032Ribosomal protein S12/S23PFAMPF00164Ribosom_S12_S23coord: 12..73
e-value: 6.5E-25
score: 87.0
IPR006032Ribosomal protein S12/S23PANTHERPTHR1165230S RIBOSOMAL PROTEIN S12 FAMILY MEMBERcoord: 1..74
IPR006032Ribosomal protein S12/S23PROSITEPS00055RIBOSOMAL_S12coord: 43..50
NoneNo IPR availableGENE3D2.40.50.140coord: 1..74
e-value: 7.3E-35
score: 121.4
NoneNo IPR availablePANTHERPTHR11652:SF128S RIBOSOMAL PROTEIN S12, MITOCHONDRIALcoord: 1..74
IPR005679Ribosomal protein S12, bacterial-typeTIGRFAMTIGR00981TIGR00981coord: 1..74
e-value: 7.3E-37
score: 124.0
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 2..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig89contigP-fluviatile_contig89:57393..57614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig89.14970.1mRNA_P-fluviatile_contig89.14970.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig89 57345..57614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig89.14970.1 ID=prot_P-fluviatile_contig89.14970.1|Name=mRNA_P-fluviatile_contig89.14970.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=74bp
MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIR
KVARVRLTSGFEVTAYIPGIGHNL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006032Ribosomal_S12/S23
IPR005679Ribosomal_S12_bac
IPR012340NA-bd_OB-fold