mRNA_P-fluviatile_contig81.14760.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig81.14760.1 vs. uniprot
Match: A0A6H5JMS9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS9_9PHAE) HSP 1 Score: 236 bits (602), Expect = 8.450e-71 Identity = 115/223 (51.57%), Postives = 165/223 (73.99%), Query Frame = 1
Query: 304 RRVSVNAPKLHGDSKGRGFSAWKRSFMRAAKTLEIDGQFIG-SERNAPISDPTIPTETLKDQGWTKAEIQRGIQASHFLESALVRDADMAIFDTHSTARGAFEELERVHDPESQGSIQALMKRIIGYRVDSGSLDNPIYHLNTLESLYTRLRAKGLNDFETFVLAHFLLILPSEYHQAKFALETATTVNRAEVVRMVGSVYATIMEGKKGGKSSRKSEQAFLA 969
+RV+VNAP L S+ GF +W++SF++AAKT+++DG FIG +E + P+ DP +PT L +G+T+AE+QRG+QA HF+ +A+V++AD AI ++A+ ELE+V+DPESQGS QALM+++ + + + S NPI HL +LE LY RLR KGLN + FVLAHF+ LP EY QAKF LETAT ++RAE+VR+V +V+A++ EG+K K R++E A LA
Sbjct: 2 KRVTVNAPLLDEKSRSHGFDSWRKSFIQAAKTIDLDGLFIGDAESSIPVGDPNLPTSELLRRGYTRAEVQRGLQAFHFITTAVVKEADKAIISNCTSAKEVLAELEKVYDPESQGSKQALMRKMFDFAIPTHSNSNPIEHLYSLELLYARLREKGLNAEQPFVLAHFVGSLPPEYQQAKFLLETATALDRAEIVRIVSTVHASLPEGRKASKGQRRAEHALLA 224
BLAST of mRNA_P-fluviatile_contig81.14760.1 vs. uniprot
Match: A0A6H5KJL1_9PHAE (CCHC-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJL1_9PHAE) HSP 1 Score: 236 bits (601), Expect = 1.050e-70 Identity = 114/223 (51.12%), Postives = 164/223 (73.54%), Query Frame = 1
Query: 304 RRVSVNAPKLHGDSKGRGFSAWKRSFMRAAKTLEIDGQFIG-SERNAPISDPTIPTETLKDQGWTKAEIQRGIQASHFLESALVRDADMAIFDTHSTARGAFEELERVHDPESQGSIQALMKRIIGYRVDSGSLDNPIYHLNTLESLYTRLRAKGLNDFETFVLAHFLLILPSEYHQAKFALETATTVNRAEVVRMVGSVYATIMEGKKGGKSSRKSEQAFLA 969
+RV+VNAP L G S+ GF +W++SF++AAK +++DGQ G +E + P+ DP +PT L +G+T+AE+QRG+QA HF+ +A+V++AD AI ++A+ ELE+V+DPESQGS QALM+++ + + + S NPI HL +LE LY RLR KGLN + FVLAHF+ LP EY QAKF LETAT ++RAE+VR+V +V+A++ EG+K K R++E A LA
Sbjct: 159 KRVTVNAPLLDGKSRSHGFDSWRKSFVQAAKAIDLDGQLTGDAESSIPVGDPNLPTSELLRRGYTRAEVQRGLQAFHFITTAVVKEADKAIISNCTSAKEVLAELEKVYDPESQGSKQALMRKMFDFAIPTHSNSNPIEHLYSLELLYARLREKGLNAEQPFVLAHFVGSLPPEYQQAKFLLETATALDRAEIVRIVSTVHASLPEGRKASKGQRRAEHALLA 381
BLAST of mRNA_P-fluviatile_contig81.14760.1 vs. uniprot
Match: A0A6H5KFH9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFH9_9PHAE) HSP 1 Score: 224 bits (572), Expect = 1.780e-69 Identity = 108/209 (51.67%), Postives = 157/209 (75.12%), Query Frame = 1
Query: 304 RRVSVNAPKLHGDSKGRGFSAWKRSFMRAAKTLEIDGQFIG-SERNAPISDPTIPTETLKDQGWTKAEIQRGIQASHFLESALVRDADMAIFDTHSTARGAFEELERVHDPESQGSIQALMKRIIGYRVDSGSLDNPIYHLNTLESLYTRLRAKGLNDFETFVLAHFLLILPSEYHQAKFALETATTVNRAEVVRMVGSVYATIMEGKK 927
+RV+VNAP L G S+ GF +W++SF++AAKT+++DG FIG +E + P+ DP +PT L +G+T+AE+QRG+QA HF+ + +V++A+ AI ++A+ ELE+V+DPESQGS QALM+++ + + + S NPI HL +LE LY RLR KGLN + FVLAHF+ LP EY QAKF LETAT ++RAE+VR+V +V+A++ EG+K
Sbjct: 2 KRVTVNAPLLDGKSRSHGFDSWRKSFIQAAKTIDLDGLFIGDAESSIPVGDPNLPTSELLRRGYTRAEVQRGLQAFHFITTGVVKEANKAIVSNCTSAKEVLAELEKVYDPESQGSKQALMRKMFDFAIPTHSNSNPIEHLYSLELLYARLREKGLNAEQPFVLAHFVGSLPPEYQQAKFLLETATALDRAEIVRIVSTVHASLPEGRK 210
BLAST of mRNA_P-fluviatile_contig81.14760.1 vs. uniprot
Match: A0A6H5L3E0_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E0_9PHAE) HSP 1 Score: 241 bits (616), Expect = 3.350e-69 Identity = 117/225 (52.00%), Postives = 167/225 (74.22%), Query Frame = 1
Query: 298 ERRRVSVNAPKLHGDSKGRGFSAWKRSFMRAAKTLEIDGQFIG-SERNAPISDPTIPTETLKDQGWTKAEIQRGIQASHFLESALVRDADMAIFDTHSTARGAFEELERVHDPESQGSIQALMKRIIGYRVDSGSLDNPIYHLNTLESLYTRLRAKGLNDFETFVLAHFLLILPSEYHQAKFALETATTVNRAEVVRMVGSVYATIMEGKKGGKSSRKSEQAFLA 969
+++RV+VNAP L G S+ GF +W++SF++AAKT+++DGQFIG +E N P+ DP +P L +G T+AE+QRG+QA HF+ +A+V++AD AI ++A+ ELE+V+DPESQGS QALM+++ + + + S NPI HL +LE LY RLR KGLN + FVLAHF+ LP EY QAKF LETAT ++RAE+VR+V +V+A++ EG+K K R++E A LA
Sbjct: 156 DQKRVTVNAPLLDGKSRSHGFDSWRKSFIKAAKTIDLDGQFIGGAESNIPVGDPNLPPSELLHRGHTRAEVQRGLQAFHFITTAVVKEADKAIISNCTSAKEVLAELEKVYDPESQGSKQALMRKMFDFAIPTHSNSNPIEHLYSLELLYARLREKGLNAEQPFVLAHFVGSLPPEYQQAKFLLETATALDRAEIVRIVSTVHASLPEGRKASKGQRRAEHALLA 380
BLAST of mRNA_P-fluviatile_contig81.14760.1 vs. uniprot
Match: A0A6H5JJN9_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN9_9PHAE) HSP 1 Score: 237 bits (604), Expect = 3.400e-67 Identity = 116/223 (52.02%), Postives = 165/223 (73.99%), Query Frame = 1
Query: 304 RRVSVNAPKLHGDSKGRGFSAWKRSFMRAAKTLEIDGQFIG-SERNAPISDPTIPTETLKDQGWTKAEIQRGIQASHFLESALVRDADMAIFDTHSTARGAFEELERVHDPESQGSIQALMKRIIGYRVDSGSLDNPIYHLNTLESLYTRLRAKGLNDFETFVLAHFLLILPSEYHQAKFALETATTVNRAEVVRMVGSVYATIMEGKKGGKSSRKSEQAFLA 969
+RV+VNAP L G S+ GF +W++SF++AAKT+++DG FIG +E + P+ DP +PT L +G+T+AE+QRG+QA HF+ +A+V++AD AI ++A+ ELE+V+DPESQGS QALM+++ + + + S NPI HL +LE LY RLR KGLN + FVLAHF+ LP EY QAKF LETAT ++RAE VR+V +V+A++ EG+K K R++E A LA
Sbjct: 159 KRVTVNAPLLDGKSRSHGFDSWRKSFIQAAKTIDLDGLFIGDAESSIPVGDPNLPTSELLRRGYTRAEVQRGLQAFHFITTAVVKEADKAIISNCTSAKEVLAELEKVYDPESQGSKQALMRKMFDFAIPTHSNSNPIEHLYSLELLYARLREKGLNAEQPFVLAHFVGSLPPEYQQAKFLLETATALDRAENVRIVSTVHASLPEGRKASKGQRRAEHALLA 381
BLAST of mRNA_P-fluviatile_contig81.14760.1 vs. uniprot
Match: A0A6H5L060_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L060_9PHAE) HSP 1 Score: 236 bits (602), Expect = 1.970e-66 Identity = 115/223 (51.57%), Postives = 165/223 (73.99%), Query Frame = 1
Query: 304 RRVSVNAPKLHGDSKGRGFSAWKRSFMRAAKTLEIDGQFIG-SERNAPISDPTIPTETLKDQGWTKAEIQRGIQASHFLESALVRDADMAIFDTHSTARGAFEELERVHDPESQGSIQALMKRIIGYRVDSGSLDNPIYHLNTLESLYTRLRAKGLNDFETFVLAHFLLILPSEYHQAKFALETATTVNRAEVVRMVGSVYATIMEGKKGGKSSRKSEQAFLA 969
+RV+VNAP L G S+ GF +W++SF++AAKT+++DGQF G +E + + DP +PT L +G+T+AE+QRG+QA HF+ +A+V++AD AI ++A+ ELE+V+DPESQGS QALM+++ + + + S NPI HL +LE LY RLR KGLN + FVLAHF+ LP EY QAKF LETAT ++RAE+VR+V +V+A++ EG+K K R++E A LA
Sbjct: 2 KRVTVNAPLLDGKSRSHGFDSWRKSFIQAAKTIDLDGQFKGDAESSISVGDPNLPTSELLRRGYTRAEVQRGLQAFHFITTAVVKEADKAIISNCTSAKEVLAELEKVYDPESQGSKQALMRKMFDFAIPTHSNSNPIEHLYSLELLYARLREKGLNAEQPFVLAHFVGSLPPEYQQAKFLLETATALDRAEIVRIVSTVHASLPEGRKASKGQRRAEHALLA 224
BLAST of mRNA_P-fluviatile_contig81.14760.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 236 bits (602), Expect = 2.360e-66 Identity = 115/223 (51.57%), Postives = 165/223 (73.99%), Query Frame = 1
Query: 304 RRVSVNAPKLHGDSKGRGFSAWKRSFMRAAKTLEIDGQFIG-SERNAPISDPTIPTETLKDQGWTKAEIQRGIQASHFLESALVRDADMAIFDTHSTARGAFEELERVHDPESQGSIQALMKRIIGYRVDSGSLDNPIYHLNTLESLYTRLRAKGLNDFETFVLAHFLLILPSEYHQAKFALETATTVNRAEVVRMVGSVYATIMEGKKGGKSSRKSEQAFLA 969
+RV+VNAP L S+ GF +W++SF++AAKT+++DG FIG +E + P+ DP +PT L +G+T+AE+QRG+QA HF+ +A+V++AD AI ++A+ ELE+V+DPESQGS QALM+++ + + + S NPI HL +LE LY RLR KGLN + FVLAHF+ LP EY QAKF LETAT ++RAE+VR+V +V+A++ EG+K K R++E A LA
Sbjct: 2 KRVTVNAPLLDEKSRSHGFDSWRKSFIQAAKTIDLDGLFIGDAESSIPVGDPNLPTSELLRRGYTRAEVQRGLQAFHFITTAVVKEADKAIISNCTSAKEVLAELEKVYDPESQGSKQALMRKMFDFAIPTHSNSNPIEHLYSLELLYARLREKGLNAEQPFVLAHFVGSLPPEYQQAKFLLETATALDRAEIVRIVSTVHASLPEGRKASKGQRRAEHALLA 224
BLAST of mRNA_P-fluviatile_contig81.14760.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 235 bits (600), Expect = 4.440e-66 Identity = 115/223 (51.57%), Postives = 164/223 (73.54%), Query Frame = 1
Query: 304 RRVSVNAPKLHGDSKGRGFSAWKRSFMRAAKTLEIDGQFIG-SERNAPISDPTIPTETLKDQGWTKAEIQRGIQASHFLESALVRDADMAIFDTHSTARGAFEELERVHDPESQGSIQALMKRIIGYRVDSGSLDNPIYHLNTLESLYTRLRAKGLNDFETFVLAHFLLILPSEYHQAKFALETATTVNRAEVVRMVGSVYATIMEGKKGGKSSRKSEQAFLA 969
+RV+VNAP L G S+ GF +W++SF++AAKT+++DG FIG +E + P+ DP PT L +G+T+AE+QRG+QA HF+ +A+V++AD AI ++A+ ELE+V+DPESQGS QALM+++ + + + S NPI HL +LE LY LR KGLN + FVLAHF+ LP EY QAKF LETAT ++RAE+VR+V +V+A++ EG+K K R++E A LA
Sbjct: 158 KRVTVNAPLLDGKSRSHGFDSWRKSFIQAAKTIDLDGLFIGDAESSIPVGDPNFPTSELLRRGYTRAEVQRGLQAFHFITTAVVKEADKAIISNCTSAKEVLAELEKVYDPESQGSKQALMRKMFDFAIPTHSNSNPIEHLYSLELLYACLREKGLNAEQPFVLAHFVGSLPPEYQQAKFLLETATALDRAEIVRIVSTVHASLPEGRKASKGQRRAEHALLA 380
BLAST of mRNA_P-fluviatile_contig81.14760.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE) HSP 1 Score: 233 bits (594), Expect = 2.290e-65 Identity = 115/223 (51.57%), Postives = 162/223 (72.65%), Query Frame = 1
Query: 304 RRVSVNAPKLHGDSKGRGFSAWKRSFMRAAKTLEIDGQFIG-SERNAPISDPTIPTETLKDQGWTKAEIQRGIQASHFLESALVRDADMAIFDTHSTARGAFEELERVHDPESQGSIQALMKRIIGYRVDSGSLDNPIYHLNTLESLYTRLRAKGLNDFETFVLAHFLLILPSEYHQAKFALETATTVNRAEVVRMVGSVYATIMEGKKGGKSSRKSEQAFLA 969
+RV+VNAP L G S+ GF +W++SF++AAKT+ +DGQFIG +E + + DP +PT L +G+T+AE+QRG+QA HF+ +A+V++AD AI ++A+ ELE+V+DPESQGS QALM+++ + + + S NPI HL +LE LY RLR KGLN + FVLAHF+ LP EY QAKF LETAT ++RAE+VR+V +V+A + EG+K K + E A LA
Sbjct: 2 KRVTVNAPLLDGKSRSHGFDSWRKSFIQAAKTIALDGQFIGDAESSILVGDPNLPTSELLRRGYTRAEVQRGLQAFHFITTAVVKEADKAIISNCTSAKEVLAELEKVYDPESQGSKQALMRKMFDFAIPTHSNSNPIEHLYSLELLYARLREKGLNAEQPFVLAHFVGSLPPEYQQAKFLLETATALDRAEIVRIVSTVHANLPEGRKASKGQGRPEHALLA 224
BLAST of mRNA_P-fluviatile_contig81.14760.1 vs. uniprot
Match: A0A6H5K9J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J7_9PHAE) HSP 1 Score: 221 bits (564), Expect = 4.740e-64 Identity = 108/223 (48.43%), Postives = 162/223 (72.65%), Query Frame = 1
Query: 304 RRVSVNAPKLHGDSKGRGFSAWKRSFMRAAKTLEIDGQFIGS-ERNAPISDPTIPTETLKDQGWTKAEIQRGIQASHFLESALVRDADMAIFDTHSTARGAFEELERVHDPESQGSIQALMKRIIGYRVDSGSLDNPIYHLNTLESLYTRLRAKGLNDFETFVLAHFLLILPSEYHQAKFALETATTVNRAEVVRMVGSVYATIMEGKKGGKSSRKSEQAFLA 969
+RV+VNAP+L G+S+G G+ +W++S ++AAKT+ +DG+ IG+ ER+AP+ +P +P+ L +T E+QR +QA HF+ +A+VR+AD AI + TA+ EL++++D ESQGS QALMK++ + + + S NPI HL +LE +Y+RLR KG+N FVLAHF+ LP EY QAKF LETATT++RAE+VR+V V+ ++ EG+K K R+++ A LA
Sbjct: 2 KRVTVNAPRLEGESRGHGYDSWRKSLIQAAKTVGLDGKLIGNNERHAPVGNPNVPSSELYRLQYTIDEVQRNLQAFHFVTTAIVREADKAIVNKCETAKEILAELDKIYDLESQGSKQALMKQMFNFTIPTHSSRNPIEHLYSLELVYSRLREKGINADAPFVLAHFVGSLPPEYQQAKFLLETATTLDRAEIVRIVSKVHVSLPEGRKASKGQRRADHALLA 224 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig81.14760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig81.14760.1 >prot_P-fluviatile_contig81.14760.1 ID=prot_P-fluviatile_contig81.14760.1|Name=mRNA_P-fluviatile_contig81.14760.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=204bp MRAAKTLEIDGQFIGSERNAPISDPTIPTETLKDQGWTKAEIQRGIQASHback to top mRNA from alignment at P-fluviatile_contig81:11335..12327+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig81.14760.1 ID=mRNA_P-fluviatile_contig81.14760.1|Name=mRNA_P-fluviatile_contig81.14760.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=993bp|location=Sequence derived from alignment at P-fluviatile_contig81:11335..12327+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig81:11335..12327+ >mRNA_P-fluviatile_contig81.14760.1 ID=mRNA_P-fluviatile_contig81.14760.1|Name=mRNA_P-fluviatile_contig81.14760.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1224bp|location=Sequence derived from alignment at P-fluviatile_contig81:11335..12327+ (Porterinema fluviatile SAG_2381)back to top |