mRNA_P-fluviatile_contig8.14668.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14668.1
Unique NamemRNA_P-fluviatile_contig8.14668.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig8.14668.1 vs. uniprot
Match: D8LKZ6_ECTSI (Endo/excinuclease amino terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ6_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 2.430e-106
Identity = 161/183 (87.98%), Postives = 168/183 (91.80%), Query Frame = 2 
Query:  329 PKANKRKKFFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHNGSINGGAYRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRALQLDSRRTVGVPGKLRLCKAMLCLDPWARYGLSIRFVREEYATSYAKLNLPPPLPVNGDPDTELSTGSREGLPVYTSVPDSQENRTDA 877
            PKAN RKKFFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHNG I GGA+RTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKV  L +DSRRTVGVPGKLRLCKAMLCLDPWARYGL IRF+REEYA SY+KLNLP PLPV GDPDTELSTG++EGLPVY S P SQE R +A
Sbjct:    2 PKANPRKKFFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHNGDIIGGAFRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVPDLPVDSRRTVGVPGKLRLCKAMLCLDPWARYGLGIRFLREEYAASYSKLNLPQPLPVKGDPDTELSTGAQEGLPVYKSPPGSQEERLEA 184
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BLAST of mRNA_P-fluviatile_contig8.14668.1 vs. uniprot
Match: UPI001F03346F (structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03346F)

HSP 1 Score: 174 bits (442), Expect = 9.410e-47
Identity = 96/269 (35.69%), Postives = 150/269 (55.76%), Query Frame = 2 
Query:  350 KFFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHNGSIN-GGAYRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRALQLDSRRTVGVPGKLRLCKAMLCLDPWARYGLSIRFVREEYATSYAKLNLPP-PLPVNGDPDTELSTGSREGLPVYTSVPDSQENRTDAL----QLQGRDCALCVEPFSAGTTLMPCYH--CGTTAHVCCLADRMLCEAGDDDTEVIPSEGVCWEPGCARRLLWSRLVKGVEVYRPSKND 1132
            +F+ CYLL S +PK+K  TYIGFTVDP RRIRQHNG I  GGA++T ++ PW+M+  +HGFP++ SAL+FE AWQHP + RR+K  V   +   +    V    R+   ML + PW R  L+IR++++EY   +  L  PP  +P+                 VY S+P  ++ ++  +    +L+ + C +C +  +    ++ C H  C   +H+ CLA   L   G+D+   IP EG C  P C + LLW ++++  +  +  K +
Sbjct:    8 RFYGCYLLYSLNPKYKGRTYIGFTVDPNRRIRQHNGGIEKGGAHKTSKRGPWEMILTIHGFPNEISALRFEWAWQHPMKSRRLKHVVEKKKSSEK---SVQFCFRVLTEMLRVGPWNRLPLTIRWLKDEYMMDFDTLKQPPIHMPI-----------------VYGSIPSWKKPKSADIAREEELETKTCCICKDLLTNKEDVLRCLHSDCDMLSHIRCLAQTFLTARGEDENFCIPLEGDC--PSCGQNLLWGQIIRHQDQLKNKKQN 254
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BLAST of mRNA_P-fluviatile_contig8.14668.1 vs. uniprot
Match: UPI001E1D2981 (structure-specific endonuclease subunit slx1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2981)

HSP 1 Score: 168 bits (425), Expect = 6.680e-44
Identity = 101/290 (34.83%), Postives = 152/290 (52.41%), Query Frame = 2 
Query:  353 FFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHNGSIN-GGAYRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRALQLDSRRTVGVPGKLRLCKAMLCLDPWARYGLSIRFVREEYATSYAKLNLPPPL-------PVNGDPDTELSTGSREGLPVYTSVPDSQENRTDALQLQGRDCALCVEPFSAGTTLMPCYH--CGTTAHVCCLADRMLCEAGDDDTEVIPSEGVCWEPGCARRLLWSRLVKGVE-VYRPSKNDTENEAQEEEPWKGVGRTAI 1189
            F+  YLL + +PK K  TYIG+TVDP RRI+QHN  +  GGAYRT  K PW+MV I+HGFP+  S L+FE AWQHP + RR+K     L   S++      K R+   ML   PW R  L++R++++E+   +    L PPL       PV             +G    +S     E  T  +    R CA+C++   + +  + CYH  C   +H+ CLA   L +  ++ T ++P EGVC  P C+++LLW  +++     Y+     TE +  E++ W    +T +
Sbjct:    8 FYGVYLLYNVNPKFKGRTYIGYTVDPNRRIKQHNLGVQAGGAYRTNGKGPWEMVLIIHGFPNDISGLRFEWAWQHPDKSRRLK----HLPKKSKKENQFEFKFRIVSEMLRTAPWNRLSLTVRWLKQEFTREFDP-KLTPPLHMAVAYGPVKSKKVKNAKAPKTKGGNTDSSEDMDPELMTPPVSKHIR-CAVCIKRMQSESNSVSCYHPKCCMVSHIACLAKSFLSKKQEEITHILPVEGVC--PRCSQQLLWGDIIRHKHGCYQTLTEATEADHSEDDHWANELQTQV 289
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BLAST of mRNA_P-fluviatile_contig8.14668.1 vs. uniprot
Match: A0A7R9GI94_9CRUS (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9GI94_9CRUS)

HSP 1 Score: 164 bits (414), Expect = 2.490e-42
Identity = 100/271 (36.90%), Postives = 142/271 (52.40%), Query Frame = 2 
Query:  296 ADTSTRGQKGHPKANKRKKFFH-CYLLQSQDPKHKRSTYIGFTVDPGRRIRQHN-GSINGGAYRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRALQLDSRRTVGVPGKLRLCKAMLCLDPWARYGLSIRFVREEYATSYAKLNLPPPLPVNGDPDTELSTGSREGLPVYTSVPDSQENRTDALQLQGRDCAL-CVEPFSAGTTLMPCYHCGTTAHVCCLADRMLCEAGDDDTEVIPSEGVCWEPGCARRLLWSRLVK 1099
            A T+ R  +G     +  + FH  YLL S +PK+K  TYIG+TVDP RRI QHN G  +GGA+RT  + PWDMV IVHGFP+  SAL+FE AWQHP+R RR++     + +   R       + L   MLC+DPW R  L++R++  +Y T +    +PP                 +GL     + D  EN T +    G  C L C E  ++    + C+ C    H+ CLAD  L  +G+    ++P  G C  P C  +++W  LV+
Sbjct:   15 AVTAARSPRGREDDFEEVENFHGVYLLCSTNPKYKGWTYIGYTVDPNRRIVQHNKGRKHGGAFRTSNRGPWDMVLIVHGFPNDVSALRFEWAWQHPKRSRRLRC---IIPVKKSRMTKFQWLIELLGRMLCVDPWCRLPLTLRWLMPKYKTPFTGEWIPP-----------SHIQYVDGLVKSRRIRDVLENSTHSASGNGSSCCLVCGEDVASVADQLRCFGCYNKFHLRCLADLFLRRSGEVTDGIVPVSGTC--PTCDLQVMWGDLVR 269
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BLAST of mRNA_P-fluviatile_contig8.14668.1 vs. uniprot
Match: UPI001EE55D5C (structure-specific endonuclease subunit slx1-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE55D5C)

HSP 1 Score: 163 bits (412), Expect = 3.460e-42
Identity = 92/255 (36.08%), Postives = 135/255 (52.94%), Query Frame = 2 
Query:  353 FFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHN-GSINGGAYRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRALQLDSRRTVGVPGKLRLCKAMLCLDPWARYGLSIRFVREEYATSYAKLNLPP---PLPVNGDPDTELSTGSREGLPVYTSVPDSQENRTDALQLQGRDCALCVEPFSAGTTLMPCYH--CGTTAHVCCLADRMLCEAGDDDTEVIPSEGVCWEPGCARRLLWSRLVK 1099
            F+  YLL + +P++K  TYIG+TVDP RRI+QHN G+  GGA+RT  K PW+M+ I+HGFP+  SAL+FE AWQHP + RR+    R L   +R+      + R+   ML   PW R  L+IR+++++Y   +   + PP   P+                            E+   +L ++ R C +C +      T + CYH  C   AH+ CLA R L + G    +VIP EG C +  C + LLW  L++
Sbjct:    8 FYGVYLLYNLNPRYKGRTYIGYTVDPNRRIKQHNTGAQAGGAWRTDGKGPWEMILIIHGFPNDISALRFEWAWQHPDKSRRL----RHLPKKTRKETAHQFRFRIVSEMLRTGPWNRLPLTIRWLKQDYCLDFPPASAPPSHMPIVXXXXXXXXXXXXXXXXXXXXXXXEKDNESEISSLNVRHRVCPVCYKRLKPSDTTVSCYHPHCQMEAHILCLAQRFLYDPG----QVIPIEGFCVK--CKQPLLWGDLIR 252
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BLAST of mRNA_P-fluviatile_contig8.14668.1 vs. uniprot
Match: A0A433U7M1_ELYCH (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433U7M1_ELYCH)

HSP 1 Score: 162 bits (411), Expect = 5.950e-42
Identity = 99/259 (38.22%), Postives = 138/259 (53.28%), Query Frame = 2 
Query:  353 FFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHN-GSINGGAYRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRALQLDSRRTVGVPGKLRLCKAMLCLDPWARYGLSIRFVREEYATSYAKLNLPPPL-------PVNGDPDTELSTGSREGLPVYTSVPDSQENRTDALQLQGRDCALCVEPFSAGTTLMPCYH--CGTTAHVCCLADRMLCEAGDDDTEVIPSEGVCWEPGCARRLLWSRLVK 1099
            F+  YLL   +PK K  TYIG+TV+P RRI+QHN G+  GGAYRT  + PW+MV IVHGFP+  S L+FE AWQHP + RR+    R +   SR+      + R+   ML   PW   GLS+R++++EY   +    L PPL       PV     T+   G+    P   S+ D+        +++   CA+C  P  A  T++ C    C   AH+ CLA   L    +D+T ++P EG C  P C   LLW  L++
Sbjct:    8 FYGVYLLLCLNPKFKGRTYIGYTVNPNRRIKQHNTGTHAGGAYRTSGRGPWEMVLIVHGFPNDVSGLRFEWAWQHPDKSRRL----RGVPGKSRKESAFQHRWRVVCNMLRTAPWCGLGLSVRWLKQEYKLDFPD-GLEPPLHMPVVYGPVLSKKVTKSQKGTSRIAPSQVSLDDANVQT----EMESSVCAVCHMPVMAEDTVLSCLRPSCPMKAHITCLAKHFL----EDETRLLPIEGKC--PDCCVTLLWGELIR 251
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BLAST of mRNA_P-fluviatile_contig8.14668.1 vs. uniprot
Match: A0A7D9HCE0_PARCT (Structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HCE0_PARCT)

HSP 1 Score: 160 bits (406), Expect = 1.450e-41
Identity = 99/259 (38.22%), Postives = 136/259 (52.51%), Query Frame = 2 
Query:  350 KFFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHNGSIN-GGAYRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRALQLDSRRTVGVPGKLRLCKAMLCLDPWARYGLSIRFVREEYATSYAKLNLPP-PLPVNGDPDTELSTGSREGLPVYTSVPDSQENRTDALQLQGRD-----CALCVEPFSAGTTLMPCYH--CGTTAHVCCLADRMLCEAGDDDTEVIPSEGVCWEPGCARRLLWSRLVK 1099
            KF+ CYLL S +PK+K  TYIGFTVDP RRI+QHNG +  GGA +T +K PW+M+  VHGFP++ SAL+FE AWQHP   RR+K ++ A +  S ++V      R+   ML + PW R  L+IR+++EEY   +  L  PP  +P+                 VY  +P  ++ +T        D     C +C          + C    C  TAH+ CLA   L     D    IP EG C  P C + LLW  L++
Sbjct:    8 KFYGCYLLYSLNPKYKGRTYIGFTVDPNRRIKQHNGGVEKGGANKTSKKGPWEMILTVHGFPNEISALRFEWAWQHPLVSRRLK-RIVARKKSSEKSVEFC--FRVLTEMLRVGPWNRLPLTIRWLKEEYKMDFDPLKQPPIHMPI-----------------VYGPIPSWKKPKTSEKGNTSEDELIPVCKICQNLIIIQDHTLRCLQADCEMTAHIFCLAKTFLSTTKQDADYCIPLEGDC--PTCGQNLLWGELIR 244
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BLAST of mRNA_P-fluviatile_contig8.14668.1 vs. uniprot
Match: UPI001458382A (structure-specific endonuclease subunit slx1-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458382A)

HSP 1 Score: 161 bits (407), Expect = 2.500e-41
Identity = 97/270 (35.93%), Postives = 150/270 (55.56%), Query Frame = 2 
Query:  350 KFFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHN-GSINGGAYRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRALQLDSRRTVGVPG--KLRLCKAMLCLDPWARYGLSIRFVREEYATSYAKLNLPP-PLPVNGDP---------DTELSTGSREGLPVYTSVPDSQENRTD-----ALQLQGRDCALCVEPFSAGTTLMPCYH--CGTTAHVCCLADRMLCEAGDDDTEVIPSEGVCWEPGCARRLLWSRLVK 1099
            +FF  YLL + +PK K  TYIG+TV+P RRI+QHN G   GGA+RT  + PW+MV I+HGFP+  SAL+FE AWQ+PQ+ RR++       L  +R    P   + R+   ML L PW R+ L++R++++ Y   +A    PP  +P+   P         + +    SR+G    + +  SQ +  D     AL  Q R C++C +   A  T + C H  C   +H+ CL+++ L ++ +   E+IP EG C  P C + +LW  +++
Sbjct:    7 RFFGVYLLYNVNPKFKGRTYIGYTVNPNRRIQQHNKGKQAGGAWRTHGRGPWEMVLIIHGFPNDISALRFEWAWQNPQKSRRLR------HLVGKRKKETPFLYRFRIVSEMLRLGPWNRFALTVRWLKQNYVQDFAPDCRPPIHMPIVYGPVKIKTLAKDNKKKGKKSRKGSNNSSPLKQSQMSEEDDIGQLALPSQQR-CSVCFKRLHADDTTVNCIHPKCSMISHIVCLSEKFLAQSKEKTKEIIPIEGKC--PSCKQLMLWGDIIR 267
[Close]
BLAST of mRNA_P-fluviatile_contig8.14668.1 vs. uniprot
Match: UPI00193AD963 (structure-specific endonuclease subunit slx1-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193AD963)

HSP 1 Score: 160 bits (406), Expect = 2.650e-41
Identity = 101/274 (36.86%), Postives = 144/274 (52.55%), Query Frame = 2 
Query:  353 FFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHN-GSINGGAYRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRALQLDSRRTVGVPGKLRLCKAMLCLDPWARYGLSIRFVREEYATSYAKLNLPPP--LPVNGDP-DTELSTGSREGLPVYTSVPDSQENRTDALQLQGR---------------------DCALCVEPFSAGTTLMPCYHCGTTAHVCCLADRMLCEAGDDDTEVIPSEGVCWEPGCARRLLWSRLVK 1099
            FF CYLL  ++PK+K  TYIGFTV+P RRI QHN G   GGA+RT  + PWDM  IVHGFPS  +AL+FE AWQHP+  RR+K   R     SR+      ++R+   M+C  PW+   L++R++++EY   Y +L   PP  +P+   P D ++ T  ++      +  D + + T+   L  R                      C+LC E  + G+ L     C ++ H+ CLA+  L    D   E+IP EG C  P C   LLW  L++
Sbjct:    8 FFGCYLLYCKNPKYKGRTYIGFTVNPKRRIAQHNAGKHKGGAWRTSGRGPWDMTLIVHGFPSDIAALRFEWAWQHPEASRRLKHVTR----KSRKETAYQYRVRILSHMVCERPWSILPLTVRWLKQEY---YTELCPTPPSHIPLAFGPVDVKMPTKCQKKKTDIVNTKDPETDHTEYTSLLERMEQKLKDLKDADTMAASATHIKCSLCKESITEGSALKCVEQCSSSFHIHCLAEDFL---KDKLHEIIPVEGFC--PICKELLLWGDLIR 269
[Close]
BLAST of mRNA_P-fluviatile_contig8.14668.1 vs. uniprot
Match: UPI001068F671 (structure-specific endonuclease subunit SLX1 homolog n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001068F671)

HSP 1 Score: 159 bits (403), Expect = 3.760e-41
Identity = 97/259 (37.45%), Postives = 139/259 (53.67%), Query Frame = 2 
Query:  335 ANKRKKFFHCYLLQSQDPKHKRSTYIGFTVDPGRRIRQHNGSIN-GGAYRTKRKRPWDMVAIVHGFPSKSSALQFEAAWQHPQRDRRIKVKVRALQLDSRRTVGVPGKLRLCKAMLCLDPWARYGLSIRFVREEYATSYAKLNLPPPLPVNGDPDTELSTGSREG-LPVYTSVPDSQENRTDALQLQGRDCALCVEPFSAGTTLMPCYH--CGTTAHVCCLADRMLCEAGDDDTEVIPSEGVCWEPGCARRLLWSRLVK 1099
            + ++ KF+ CYLL   +PK+K  TYIGFTVDP RRI+QHNG +  GGAYRT  K PW+MV  VHGFP++ SAL+FE AWQHP R RR+K +V A +  + +        R+   ML + PW R  L+I++++E+Y   +  L  PP           +    R G +  +    D+++  ++   +    C +C         L+ C H  C  TAH+ CLA   L     D    +P EG C  P C + LLW  L++
Sbjct:    3 SEEKSKFYGCYLLYCLNPKYKGRTYIGFTVDPNRRIKQHNGGVQKGGAYRTSNKGPWEMVLTVHGFPNEISALRFEWAWQHPFRSRRLK-RVVANKKSTEKNFAF--YFRVLTEMLRIGPWNRLALTIQWLKEDYHMDFDLLKQPP-----------VHMAIRFGPITSWKKPKDTKDVGSENASVPM--CKICDNLIVIQDHLLQCLHVDCEMTAHIFCLAKTFLSSREQDKDFCLPLEGDC--PICEQNLLWGELIR 243
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKZ6_ECTSI2.430e-10687.98Endo/excinuclease amino terminal domain-containing... [more]
UPI001F03346F9.410e-4735.69structure-specific endonuclease subunit SLX1 homol... [more]
UPI001E1D29816.680e-4434.83structure-specific endonuclease subunit slx1-like ... [more]
A0A7R9GI94_9CRUS2.490e-4236.90Structure-specific endonuclease subunit SLX1 homol... [more]
UPI001EE55D5C3.460e-4236.08structure-specific endonuclease subunit slx1-like ... [more]
A0A433U7M1_ELYCH5.950e-4238.22Structure-specific endonuclease subunit SLX1 homol... [more]
A0A7D9HCE0_PARCT1.450e-4138.22Structure-specific endonuclease subunit SLX1 homol... [more]
UPI001458382A2.500e-4135.93structure-specific endonuclease subunit slx1-like ... [more]
UPI00193AD9632.650e-4136.86structure-specific endonuclease subunit slx1-like ... [more]
UPI001068F6713.760e-4137.45structure-specific endonuclease subunit SLX1 homol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3677677..3681991 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score335.1
Seed ortholog evalue5.3e-89
Seed eggNOG ortholog2880.D8LKZ6
KEGG koko:K15078
KEGG Pathwayko03460,map03460
GOsGO:0000228,GO:0000723,GO:0001325,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008821,GO:0009893,GO:0009987,GO:0010604,GO:0010638,GO:0016043,GO:0016787,GO:0016788,GO:0016888,GO:0016889,GO:0016893,GO:0016894,GO:0017108,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031325,GO:0031974,GO:0031981,GO:0032200,GO:0032204,GO:0032206,GO:0032991,GO:0033043,GO:0033044,GO:0033557,GO:0034641,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045935,GO:0046483,GO:0048256,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051052,GO:0051054,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051276,GO:0060249,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090656,GO:0090737,GO:0140097,GO:1901360,GO:1904429,GO:1904431,GO:2001252
EggNOG free text desc.5'-flap endonuclease activity
EggNOG OGsKOG3005@1,KOG3005@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGIY-YIG nuclease superfamily
Ec32 orthologEc-11_006130.1
Exons5
Model size1837
Cds size1428
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817263.4849274-UTR-P-fluviatile_contig8:3677676..36779051622817263.4849274-UTR-P-fluviatile_contig8:3677676..3677905Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3677677..3677905 +
1693571815.8931952-UTR-P-fluviatile_contig8:3677676..36779051693571815.8931952-UTR-P-fluviatile_contig8:3677676..3677905Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3677677..3677905 +
1622817263.4964566-UTR-P-fluviatile_contig8:3678347..36783711622817263.4964566-UTR-P-fluviatile_contig8:3678347..3678371Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3678348..3678371 +
1693571816.2605116-UTR-P-fluviatile_contig8:3678347..36783711693571816.2605116-UTR-P-fluviatile_contig8:3678347..3678371Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3678348..3678371 +
1622817263.5574772-UTR-P-fluviatile_contig8:3681835..36819911622817263.5574772-UTR-P-fluviatile_contig8:3681835..3681991Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3681836..3681991 +
1693571816.3135338-UTR-P-fluviatile_contig8:3681835..36819911693571816.3135338-UTR-P-fluviatile_contig8:3681835..3681991Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3681836..3681991 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817263.5102682-CDS-P-fluviatile_contig8:3678371..36785711622817263.5102682-CDS-P-fluviatile_contig8:3678371..3678571Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3678372..3678571 +
1693571816.2704887-CDS-P-fluviatile_contig8:3678371..36785711693571816.2704887-CDS-P-fluviatile_contig8:3678371..3678571Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3678372..3678571 +
1622817263.5237129-CDS-P-fluviatile_contig8:3678963..36789911622817263.5237129-CDS-P-fluviatile_contig8:3678963..3678991Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3678964..3678991 +
1693571816.279466-CDS-P-fluviatile_contig8:3678963..36789911693571816.279466-CDS-P-fluviatile_contig8:3678963..3678991Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3678964..3678991 +
1622817263.5360382-CDS-P-fluviatile_contig8:3680364..36805821622817263.5360382-CDS-P-fluviatile_contig8:3680364..3680582Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3680365..3680582 +
1693571816.2886333-CDS-P-fluviatile_contig8:3680364..36805821693571816.2886333-CDS-P-fluviatile_contig8:3680364..3680582Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3680365..3680582 +
1622817263.5470858-CDS-P-fluviatile_contig8:3680853..36818351622817263.5470858-CDS-P-fluviatile_contig8:3680853..3681835Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3680854..3681835 +
1693571816.300832-CDS-P-fluviatile_contig8:3680853..36818351693571816.300832-CDS-P-fluviatile_contig8:3680853..3681835Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3680854..3681835 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14668.1prot_P-fluviatile_contig8.14668.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3678372..3681835 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14668.1

>prot_P-fluviatile_contig8.14668.1 ID=prot_P-fluviatile_contig8.14668.1|Name=mRNA_P-fluviatile_contig8.14668.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=476bp
MAEPGEQGAAVSLPADTSTRGQKGHPKANKRKKFFHCYLLQSQDPKHKRS
TYIGFTVDPGRRIRQHNGSINGGAYRTKRKRPWDMVAIVHGFPSKSSALQ
FEAAWQHPQRDRRIKVKVRALQLDSRRTVGVPGKLRLCKAMLCLDPWARY
GLSIRFVREEYATSYAKLNLPPPLPVNGDPDTELSTGSREGLPVYTSVPD
SQENRTDALQLQGRDCALCVEPFSAGTTLMPCYHCGTTAHVCCLADRMLC
EAGDDDTEVIPSEGVCWEPGCARRLLWSRLVKGVEVYRPSKNDTENEAQE
EEPWKGVGRTAIDGGPLVWRVDDSSDEDDDEEGGGGSADSGDCQGCGGGD
WSRGAASGNFRCDQDDKDGDEDEEDEEDRFWKLSGSGSSLGRRTAGSGEG
VQKRETAAFGRERGTSPLLEKKPSKAQRIPLVEMTSDGHESSDSGFGDQA
SDAERSSQKLPLAERLRLRMSHRGN*
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mRNA from alignment at P-fluviatile_contig8:3677677..3681991+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14668.1 ID=mRNA_P-fluviatile_contig8.14668.1|Name=mRNA_P-fluviatile_contig8.14668.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4315bp|location=Sequence derived from alignment at P-fluviatile_contig8:3677677..3681991+ (Porterinema fluviatile SAG_2381)
GAGAGCGTGTGTCGTGTGTTCTGTGCAGTCGTGTACAATTGTGACAAAGG
GCGGGGGGTAGCAGCGCTGGGACGCTCTCTCCTGTCGTTTCCTTTGATTC
AAGACACGTGTTCTGTGCTGCACACGAGTACCGCCCGAAGAAGGCGGGAC
GAGCCGCCAGCATTGAGGCTCAGAAAATGGAGTAACGGGCACTTGAGCGT
TTGCCTGAACGAAAGAGAGCGAGCAGCAGGTGTGGCGCGAGTGTGATCAA
ATCGTCGAACATCGAAGACGGGTGCCAATTTGATTTAAGCTATGTGCTGC
GTTTTCTAATTCAATGCCGTACCACCTCTCGCAATTTTGGTCGGAGTTTC
GCGTATATTTACCAACCACCACGAACTCGGTATTGCTCAACCACGCAGCC
CCGCCGGTACAGGCGCGTAGGCCGGCGGTTTCGTTCCTCGCATTGTACAC
ATCTACAACTTCTCTCCTTCTGAACCGTATCCCGACAGCAACTGACACTG
TACGCTCACGGGTGTTTTTGCAGGTGCCCGATGAGCGTTGACGTTTCTAC
GGCCACAATGTGGTGCCTTTGCCGCCGCGTTGACAGCGCGCCGTTGGTGA
CCCTCGCCTTCCCCGCCTTCCCCGCCTGCCCCGCCCGCCCCTACTTGGAT
GCCACTCTGGGCGTGGCAAAGGTCACATCTTTAAACTAAAAACCAATGGC
GGAGCCAGGAGAGCAAGGCGCGGCCGTATCATTGCCTGCCGATACCAGCA
CACGAGGACAGAAAGGCCACCCGAAGGCGAACAAGCGGAAAAAGTTCTTT
CACTGCTACCTGCTGCAATCGCAAGACCCGAAGCACAAGCGTTCGACGTA
TATCGGTTTCACCGTGGACCCTGGGCGAAGGATTCGGCAGCACAAGTGAA
TTACCTGTGGCTCGCACAGTATGTTATGTTGCCTTATGCAAGACCTGCAG
AAGGGACGCTAGAACATGGACGACGTGTTGGCTCTCAGGCTTTTTGCCGG
TGCAAACTCGTGAGAATTGCCTGTCGAGCTCACTTGCTCATCTCCGCCTC
TTTCTGGCCGGCTGCTGCTACATCTGCCTCTTGGCGCCTTTGTAGGAACA
ATTCCGATAAGAGGGCATGTTGTCGCGATACAGGTCTGCTCTCCTCTAAT
GCTTAGTTTGCTCGCCTCTCTTGCTTCCCCGTCTCGTGCTCGTATCCTGT
GTTCGCTTTCTCTCCAATACCCTTTCTGGTCGTCACCAAACCGCAAACTA
CTTGCCGCCATCAACCGCGCACTGCTTGGTCCTCCAGTGGAAGCATCAAT
GGCGGGGCATACAGAGTGAGACGCAATACTAGGTTTGATTGTCGCCGCCC
CCATTCACGCCAGAGAAATGCTGTTTCGGATTATATGCCAGTTGGCCACA
TGTTATTACTGTACTCACCTGTGTATTTGTCTTTATAATGCTTGTCCCAC
TTTCCAAAGTCCACTCTCTAAGTGCTTGGCCGATGCACCATCACCGTTTG
GTTATAAATATGCGGGTAACTGGACCTCGGCGACACCTGGCCCTCCTGAC
CCCCTTCCCTGAACAAACGCCTAAGAATCTAAGTCCCGTGGAGAGGTGGC
TTTAACCTGCCACCGTAGGTAGGCTTGTTCCTTTGGTGAGATGTGGGCGA
GGAAGTGCCGAGCTGGTCAAGCGGGGCTTGACCGGCGAGGGTAAGGTATA
AGAGTGATTCTTGAGGGGATGATCGTGCACACCGCTCGGGATCAGGACCC
CGCATCTTTCGTAGAAATGGTGAGTCTACCTCGTGAAGATCCGCGGGGTC
TCGGCGGCGAGCCGAGGACCCTGTGAGGCTTTGCATGTGTGTTCGAATAC
AATGAGGGACCCTACATATGTCATCCACATTTCCGCACGATAGAAGGGTT
TAGCCGCCTGCTTCGCCGTAAGCTTGCAAGGTGTGTTGTCAAGCGTATGG
GCACGGAAGGTGCAAACTTTCAGCAACAGATTTGAACTCATCACCCGCGA
TGTGCCGCAGCTCGCGAGACGCAGCAGACATTCGCAGGTCGCAAATACAT
CAGACATTCGCACTTGAACAAATCTTAGTACGTTGTGTGGATAAAAGGGT
GTCGTCCTCGACTGACGATGGGAGATGCTTACCCAATTTTGAGGTTCATC
ACTCCTCTTGAGGGGGTCACCTTCACACTGCCCCCCCTTTTTCGAGACTT
TTCTTGGTTGCGGAGCAAGAAGGCTTTGAGGGGTAACTGGAATCGGACCG
GCTGGCGGCGAGTCGTCCACCTTCTTTCCAAAAATCTTCTTAGCGTGTGA
AGTGGGCCAAGCACCTTCGCCACGACTTGTCACCTTTGCCACGTCTTATC
AGAAATCCGAGAGTACATCCATCTGTGTTTTTTCACCTTTACATATTTTC
CCGGAATTTTTATTTATTGATTTATTTTCCTATCAAGAGACGTGTGTATG
GCGGGATACGAACCCGGGTCTTTTGCCTCCATTACCAGACGCTTTGTCCC
TCTTCGTTGACGCCATTGTGGTTAAAGGAGGGTTCGTCCTCGACTGACGG
GAGTAGATGACTACCCCTTGTAAGGTTCGCCACTCCTTTTGGGGAGGTCA
CCTCCACAGTTGCATTGAATTTGACTACATATTTGTATCCTGCTCGTTTT
GTTTTCTTTTTGGGCCTCTTTCTGGTGAAAACGTCCAGACGAAGCGCAAA
CGCCCGTGGGACATGGTAGCCATCGTTCACGGGTTCCCTTCGAAATCGTC
CGCGCTGCAATTTGAGGCAGCCTGGCAGCATCCCCAACGAGACCGTCGCA
TCAAAGTCAAAGTGCGTGCTTTACAATTGGACTCGCGCCGAACAGTTGGG
GTACCGGGCAAGCTTCGCCTCTGCAAGGCCATGCTTTGCCTTGATCCCTG
GGCCAGGTGAGCACTTGCTTAGTATGCGCGAGCCCTCGAGGCAGCGTACA
CTGCACGATCAATGAGGTAGGCTATCCGCGTTTCGGCACGTGCGCAACTC
GCTGGCTCTAATGCTAGAAGGCTTATCGTATAAGTGCATTTCTCCACGAC
CCCACTGAGCACGTCCACCGCCATGCTCTTCTCTCATGACGAACGTACTC
GAACGATGCCGACCAACCAACCGCCCATCCCGCCTGACCTGAACACGAAA
CCTACCCCGACGCCGTCTCGATGGCAGGTACGGCCTGAGCATTCGCTTCG
TGCGGGAGGAATACGCGACATCCTACGCCAAGTTGAACCTCCCCCCACCG
CTCCCGGTCAACGGCGACCCAGACACGGAACTCAGCACAGGCTCACGAGA
GGGACTCCCCGTCTACACCTCTGTACCCGATTCCCAAGAGAATCGGACCG
ATGCACTACAGCTCCAAGGCAGAGACTGCGCCTTGTGCGTGGAGCCCTTT
TCGGCGGGCACGACGTTGATGCCCTGCTACCACTGTGGGACGACGGCGCA
CGTGTGTTGCCTGGCGGATCGAATGCTTTGCGAGGCCGGGGACGACGACA
CTGAGGTGATCCCGTCCGAGGGCGTTTGTTGGGAGCCGGGTTGCGCGCGG
CGCCTGCTGTGGTCGCGGCTCGTGAAGGGCGTGGAAGTGTACCGGCCGAG
TAAAAATGACACGGAGAACGAGGCTCAGGAAGAGGAGCCATGGAAGGGTG
TTGGGAGAACGGCAATTGATGGTGGGCCTCTCGTGTGGCGAGTTGACGAC
AGCAGCGATGAAGACGACGACGAAGAGGGCGGCGGCGGCAGCGCTGACTC
GGGGGATTGCCAAGGGTGCGGCGGGGGAGATTGGAGCCGCGGTGCGGCAT
CAGGGAACTTTCGATGCGACCAAGATGACAAGGACGGTGACGAGGACGAA
GAGGACGAAGAGGACAGGTTCTGGAAACTAAGCGGTAGTGGGTCCTCTCT
GGGTAGACGAACAGCGGGCTCTGGCGAAGGTGTACAGAAGAGGGAAACTG
CGGCGTTCGGAAGGGAACGTGGAACGTCGCCATTACTTGAGAAAAAGCCG
TCCAAGGCGCAACGTATTCCGCTCGTCGAGATGACCAGCGATGGACACGA
AAGTAGTGACAGTGGGTTTGGAGACCAGGCGAGTGACGCAGAACGGTCGT
CACAGAAGCTTCCACTCGCAGAACGACTGAGGTTGAGAATGAGTCACCGT
GGTAACTGACTGTACAAGCTTTGGTGATGATACCGAGTACAGACACGTGC
ACGCCGCTAATACTGGAATGTCGCCTGCAAAACAGCGCTTGGATTACATG
GCAACACGTGAGTCGTGCATCACGCTATTGGATACCATCGTGAAAAAAGT
ATGAAAGTATTCACG
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:3677677..3681991+

>mRNA_P-fluviatile_contig8.14668.1 ID=mRNA_P-fluviatile_contig8.14668.1|Name=mRNA_P-fluviatile_contig8.14668.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2856bp|location=Sequence derived from alignment at P-fluviatile_contig8:3677677..3681991+ (Porterinema fluviatile SAG_2381)
ATGGCGGAGCCAGGAGAGCAAGGCGCGGCCGTATCATTGCCTGCCGATAC
CAGCACACGAGGACAGAAAGGCCACCCGAAGGCGAACAAGCGGAAAAAGT
TCTTTCACTGCTACCTGCTGCAATCGCAAGACCCGAAGCACAAGCGTTCG
ACGTATATCGGTTTCACCGTGGACCCTGGGCGAAGGATTCGGCAGCACAA
ATGGCGGAGCCAGGAGAGCAAGGCGCGGCCGTATCATTGCCTGCCGATAC
CAGCACACGAGGACAGAAAGGCCACCCGAAGGCGAACAAGCGGAAAAAGT
TCTTTCACTGCTACCTGCTGCAATCGCAAGACCCGAAGCACAAGCGTTCG
ACGTATATCGGTTTCACCGTGGACCCTGGGCGAAGGATTCGGCAGCACAA
TGGAAGCATCAATGGCGGGGCATACAGATGGAAGCATCAATGGCGGGGCA
TACAGAACGAAGCGCAAACGCCCGTGGGACATGGTAGCCATCGTTCACGG
GTTCCCTTCGAAATCGTCCGCGCTGCAATTTGAGGCAGCCTGGCAGCATC
CCCAACGAGACCGTCGCATCAAAGTCAAAGTGCGTGCTTTACAATTGGAC
TCGCGCCGAACAGTTGGGGTACCGGGCAAGCTTCGCCTCTGCAAGGCCAT
GCTTTGCCTTGATCCCTGGGCCAGACGAAGCGCAAACGCCCGTGGGACAT
GGTAGCCATCGTTCACGGGTTCCCTTCGAAATCGTCCGCGCTGCAATTTG
AGGCAGCCTGGCAGCATCCCCAACGAGACCGTCGCATCAAAGTCAAAGTG
CGTGCTTTACAATTGGACTCGCGCCGAACAGTTGGGGTACCGGGCAAGCT
TCGCCTCTGCAAGGCCATGCTTTGCCTTGATCCCTGGGCCAGGTACGGCC
TGAGCATTCGCTTCGTGCGGGAGGAATACGCGACATCCTACGCCAAGTTG
AACCTCCCCCCACCGCTCCCGGTCAACGGCGACCCAGACACGGAACTCAG
CACAGGCTCACGAGAGGGACTCCCCGTCTACACCTCTGTACCCGATTCCC
AAGAGAATCGGACCGATGCACTACAGCTCCAAGGCAGAGACTGCGCCTTG
TGCGTGGAGCCCTTTTCGGCGGGCACGACGTTGATGCCCTGCTACCACTG
TGGGACGACGGCGCACGTGTGTTGCCTGGCGGATCGAATGCTTTGCGAGG
CCGGGGACGACGACACTGAGGTGATCCCGTCCGAGGGCGTTTGTTGGGAG
CCGGGTTGCGCGCGGCGCCTGCTGTGGTCGCGGCTCGTGAAGGGCGTGGA
AGTGTACCGGCCGAGTAAAAATGACACGGAGAACGAGGCTCAGGAAGAGG
AGCCATGGAAGGGTGTTGGGAGAACGGCAATTGATGGTGGGCCTCTCGTG
TGGCGAGTTGACGACAGCAGCGATGAAGACGACGACGAAGAGGGCGGCGG
CGGCAGCGCTGACTCGGGGGATTGCCAAGGGTGCGGCGGGGGAGATTGGA
GCCGCGGTGCGGCATCAGGGAACTTTCGATGCGACCAAGATGACAAGGAC
GGTGACGAGGACGAAGAGGACGAAGAGGACAGGTTCTGGAAACTAAGCGG
TAGTGGGTCCTCTCTGGGTAGACGAACAGCGGGCTCTGGCGAAGGTGTAC
AGAAGAGGGAAACTGCGGCGTTCGGAAGGGAACGTGGAACGTCGCCATTA
CTTGAGAAAAAGCCGTCCAAGGCGCAACGTATTCCGCTCGTCGAGATGAC
CAGCGATGGACACGAAAGTAGTGACAGTGGGTTTGGAGACCAGGCGAGTG
ACGCAGAACGGTCGTCACAGAAGCTTCCACTCGCAGAACGACTGAGGTTG
AGAATGAGTCACCGTGGTAACTGAGTACGGCCTGAGCATTCGCTTCGTGC
GGGAGGAATACGCGACATCCTACGCCAAGTTGAACCTCCCCCCACCGCTC
CCGGTCAACGGCGACCCAGACACGGAACTCAGCACAGGCTCACGAGAGGG
ACTCCCCGTCTACACCTCTGTACCCGATTCCCAAGAGAATCGGACCGATG
CACTACAGCTCCAAGGCAGAGACTGCGCCTTGTGCGTGGAGCCCTTTTCG
GCGGGCACGACGTTGATGCCCTGCTACCACTGTGGGACGACGGCGCACGT
GTGTTGCCTGGCGGATCGAATGCTTTGCGAGGCCGGGGACGACGACACTG
AGGTGATCCCGTCCGAGGGCGTTTGTTGGGAGCCGGGTTGCGCGCGGCGC
CTGCTGTGGTCGCGGCTCGTGAAGGGCGTGGAAGTGTACCGGCCGAGTAA
AAATGACACGGAGAACGAGGCTCAGGAAGAGGAGCCATGGAAGGGTGTTG
GGAGAACGGCAATTGATGGTGGGCCTCTCGTGTGGCGAGTTGACGACAGC
AGCGATGAAGACGACGACGAAGAGGGCGGCGGCGGCAGCGCTGACTCGGG
GGATTGCCAAGGGTGCGGCGGGGGAGATTGGAGCCGCGGTGCGGCATCAG
GGAACTTTCGATGCGACCAAGATGACAAGGACGGTGACGAGGACGAAGAG
GACGAAGAGGACAGGTTCTGGAAACTAAGCGGTAGTGGGTCCTCTCTGGG
TAGACGAACAGCGGGCTCTGGCGAAGGTGTACAGAAGAGGGAAACTGCGG
CGTTCGGAAGGGAACGTGGAACGTCGCCATTACTTGAGAAAAAGCCGTCC
AAGGCGCAACGTATTCCGCTCGTCGAGATGACCAGCGATGGACACGAAAG
TAGTGACAGTGGGTTTGGAGACCAGGCGAGTGACGCAGAACGGTCGTCAC
AGAAGCTTCCACTCGCAGAACGACTGAGGTTGAGAATGAGTCACCGTGGT
AACTGA
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