mRNA_P-fluviatile_contig8.14617.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14617.1
Unique NamemRNA_P-fluviatile_contig8.14617.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig8.14617.1 vs. uniprot
Match: D7G2R5_ECTSI (DUF2040 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R5_ECTSI)

HSP 1 Score: 424 bits (1091), Expect = 1.350e-143
Identity = 289/446 (64.80%), Postives = 309/446 (69.28%), Query Frame = 1
Query:    1 MRKSGVKFGLIGTASSLKKG-------AGRVSRPIGSKPVPHRPPPGATSVFDTNSDDEE-GPKGDLDGVAAVNKRLAAISAKQEKQAKKEYEEALDADPSVFDYDRVYDGMKESRESKVAAAVVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFERKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMSGFYSNLITKNIAMGGDVEKSANSAFTAGAKRHKVTDDYEMRDGNDRS------------------AAARKGHQAGAGRVAADIGGDGSATPEGEGSEEAAAPTARMVDPRAAESK--RNDDAG--RSASAGRXXEE--HATGGTVKRARLEQVEAGXXXXXXESKTGXXXXXXXXXXXXXXXXXXEGRNDERTAEEKEAXXXLEKARQSAEAXXXXXATVKAARERFLARKK 1242
            MRKSGVKFGLIGTASSLKKG       AGR  RPIGSKP P R P G+TSVFD NSDDEE   KGDL GV AVNKRLAAISAKQEKQAKKEYE+AL ADPSVFDYDRVYDGMKESRESKVAAA VA EKEKRQPKYIGNLLKQAKMRAVESDRIF+RKLQKERE QDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGM GFYSNLITKNIAMGGDVEKSANSAFTAG+KRH  TD+YEM+DGN+++                       G   G GR   D GGD  ++P    ++E+  PTARMVDPRA E K  R D+AG   S  +GR   +   A     KRARL    AG      ++  G                  E R DERT EEK A    +        XXXXX     ARERFLARKK
Sbjct:    1 MRKSGVKFGLIGTASSLKKGSSSAAGAAGR-GRPIGSKPAPRRRPAGSTSVFDANSDDEEEDSKGDLSGVTAVNKRLAAISAKQEKQAKKEYEDALQADPSVFDYDRVYDGMKESRESKVAAATVAREKEKRQPKYIGNLLKQAKMRAVESDRIFDRKLQKEREAQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMGGFYSNLITKNIAMGGDVEKSANSAFTAGSKRHAATDEYEMQDGNEQAXXXXXXXXXXXXXXXXXEGGPANGASQG-GREGRD-GGDADSSPGR--TDESGGPTARMVDPRAGEQKKSRRDEAGVRDSERSGRRRGDSGEAVDNVAKRARL----AGEASDGGDASVGDDGGV-------------EQRQDERTDEEKSAAEAADXXXXXXXXXXXXXXXXXXARERFLARKK 424          
BLAST of mRNA_P-fluviatile_contig8.14617.1 vs. uniprot
Match: A0A835YZI8_9STRA (Coiled-coil domain-containing protein 55-domain containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZI8_9STRA)

HSP 1 Score: 189 bits (480), Expect = 4.180e-54
Identity = 123/247 (49.80%), Postives = 164/247 (66.40%), Query Frame = 1
Query:   19 KFGLIGTASSLKKGAGRVSRPIGSKPVPHRPPPGATSVFDTNSDDEEGPKGDLDGVAAVNKRLAAISAKQEKQAKKEYEEALDADPSVFDYDRVYDGMKESRESKVAAAVVA--HEKEKR-QPKYIGNLLKQAKMRAVESDRIFERKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKT---GMSGFYSNLITKNIAMGGDVEKSANSAFTAGAKRHKVTDDYEMR 741
            ++GL+G A +LK  +         +  P R P  A    D++SD   G + D    AAVN+RLAA  A++ ++ +K   +A+  DPSVFDYD VYD + + R+ K AAA  A  ++K KR QP+YIGNLL+QAK+R VE DR+++RKL KEREE DK  G A MKFVTSAYK KLMEQKKWE+ Q+ E ERE + +       GM+ FYSNL+TKNIAMGGDV  +A SAFTAG++RH     ++++
Sbjct:    3 RYGLLGNAKTLKAQSVAAKTAKAPRKAPARGPAVAAFGDDSDSDGGAGAE-DPTSRAAVNRRLAAEQAERARRMEKVAVQAVMDDPSVFDYDGVYDEVSKGRDDKAAAAAAARGNDKTKRLQPRYIGNLLEQAKLRTVEQDRVYDRKLAKEREEGDKEFGAAEMKFVTSAYKAKLMEQKKWEVAQEREAEREAQAEADMKRGGGMTAFYSNLLTKNIAMGGDVA-NATSAFTAGSRRHAAAAAFKVK 247          
BLAST of mRNA_P-fluviatile_contig8.14617.1 vs. uniprot
Match: A0A7S1XVS8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVS8_9STRA)

HSP 1 Score: 147 bits (370), Expect = 7.770e-38
Identity = 89/155 (57.42%), Postives = 116/155 (74.84%), Query Frame = 1
Query:  259 ALDADPSVFDYDRVYDGMKESRESKVAAAVVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFERKLQKEREEQDKLEG--EATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMSGFYSNLITKNIAMGGDVEKSANSAFTAGAKRHK 717
            AL  D SVFDYD VYD M  +R+S  AAA  A E+++R+ KY  NLLKQA+MR ++SDRI+ERKL++E  E  ++ G  +   KFV +AY+K+L E++ WE  ++ E ERE RNDVTKTGM GFYSNL+TKNIAMGGDV K+A S+FT G+K+ K
Sbjct:    4 ALTEDASVFDYDGVYDSMTSARDS--AAAAQASERKERKSKYTENLLKQAQMRKLQSDRIYERKLRREAAEVAEMHGGVKDEDKFVGAAYRKQLEEREAWEKAEREEAEREARNDVTKTGMMGFYSNLLTKNIAMGGDV-KNAQSSFTVGSKQSK 155          
BLAST of mRNA_P-fluviatile_contig8.14617.1 vs. uniprot
Match: A0A7S3HBP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBP6_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.740e-34
Identity = 91/216 (42.13%), Postives = 130/216 (60.19%), Query Frame = 1
Query:   64 GRVSRPIGSKPVPHRPPPGATSVFDTNSDDEEGPKGDLDGVAAVNKRLAAISAKQEKQAKKEYEEALDADPSVFDYDRVYDGMKESRESKVAAAVVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFERKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMSGFYSNLITKNIAMGGDVEKSANSAFTAGAKR 711
            G +S+   + P   +P     S+FD +  DE+      D V+ VN +LA  +A  E+        A  A+P ++DYD  YD  K   ++K   +     K+  + +Y+ NLL  +KMR  E +R+FE+ L KER+ +D   G+   KFVT+AYKKKL+E KKWE + +L DE EQR DV K+GM GFY+NL+TKN+AMGGDV+  A S +TAG+ R
Sbjct:   13 GLISKKPAAPPAQIKP---RLSMFDRDDSDEDSSAVSND-VSRVNAQLARRNAILEQTMSA----AASAEPDIYDYDGAYDSFKAKEQAKHQLSQPIATKDAPKARYVNNLLATSKMREKEKERVFEKNLLKERKVEDAEFGDKD-KFVTAAYKKKLLEDKKWEYEDRLADEVEQRTDVRKSGMEGFYANLLTKNVAMGGDVDAHAVSVYTAGSAR 219          
BLAST of mRNA_P-fluviatile_contig8.14617.1 vs. uniprot
Match: W7TFP5_9STRA (DUF2040 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFP5_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.080e-33
Identity = 96/240 (40.00%), Postives = 136/240 (56.67%), Query Frame = 1
Query:   19 KFGLIGTASSLKKGAGRVSRPIGSKPVPHRPPPGATSVFDTNSDDEEGPKGDLDGVAAVNKRLAAISAKQEKQAKKEYEEALDADPSVFDYDRVYDGMKESRESKVAAAVVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFERKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTK---------TGMSGFYSNLITKNIAMGGDVEKSANSAFTAGAKR 711
            K+GL+      K   G   RP  +   P RP   A S+ D +SDD    +  L   A+ NK L A S K +K  ++    A  +DPS++DYD VYD +   RE +   A  A ++EK+  +YI NL + A+++  E DR +ER+L KER+E+D L  +  + FVTSAYKKKLME +KWE   +LE+                   +GM  F+SNL+TKNIAMG DV+ +A SA+T G+K+
Sbjct:   10 KYGLV--VPQKKAVPGMRGRPRPASAAPRRPAGSAFSLDDDDSDDNGQEEDGLASKASFNKMLQAQSIKAQKSLEEAEAAARASDPSIYDYDAVYDEIHAKREERDNMAAEAAKEEKKTSRYITNLKRAAELKKQEQDRFYERRLAKERKEEDALYKDKDV-FVTSAYKKKLMETQKWETIDRLEEXXXXXXXXXXXXKGAPGGGSGMDAFFSNLLTKNIAMGADVKVAARSAYTVGSKQ 246          
BLAST of mRNA_P-fluviatile_contig8.14617.1 vs. uniprot
Match: A0A7R9YG81_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG81_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.700e-33
Identity = 87/199 (43.72%), Postives = 131/199 (65.83%), Query Frame = 1
Query:  118 GATSVFDTNSDDEEGPKGDLDGVAAVNKRLAAISAKQEKQAKKEYEEALDADPSVFDYDRVYDGMKESRESKVAAAVVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFERKLQKEREEQDKLEGE--ATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMSGFYSNLITKNIAMGGDVEKSANSAFTAGAK 708
            G +S F +  +D E P+ DL  V +   R A  S + +++  ++ + AL+ D +VF+YD VYD    SR +K A   VA +K KR+ KY   LL+QAK+R + +DR++ERKL +E+ E+ KL G+  A  +FV +AY+K+L E++++E   + E E E   DVTK GM+GFY NL+TKNIA GGD+E +A S+FT G++
Sbjct:   33 GVSSAFASTVEDVETPQADLSAVNSALARGAYTSKRAQRETLEQQKAALEQDATVFEYDGVYDDFVNSRAAKEAQ--VAEDKRKRKSKYTEALLQQAKLRKLANDRVYERKLLREQAEEAKLNGDVKAEDRFVGAAYRKQLEERERYEAALKAEAEAEAAADVTKKGMTGFYQNLLTKNIAFGGDIE-NATSSFTVGSR 228          
BLAST of mRNA_P-fluviatile_contig8.14617.1 vs. uniprot
Match: A0A662Y6L8_9STRA (DUF2040 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6L8_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.160e-32
Identity = 90/185 (48.65%), Postives = 120/185 (64.86%), Query Frame = 1
Query:  160 GPKGDLDGVAAVNKRLAAISAK--QEKQAKKEYEEALDADPSVFDYDRVYDGMKESRESKVAAAVVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFERKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTG---MSGFYSNLITKNIAMGGDVEKSANSAFTA 699
            G K D D  AA  +R+   +A+  Q+ Q ++   +AL  DPSVFDYD VYD MK +R+S+V    V  E EK+QPKYIG LL QAK+R VE++RI ER+L  ER+  D L G+   K V+++YK+KL E K+W+ +       E R+DVTK G   M+GFY+NL  KNIAMGG    +A SA+TA
Sbjct:   28 GNKADEDAKAADRRRVGLEAARSLQQSQVERTRAQALADDPSVFDYDAVYDDMKSARQSEVTKRAVQREAEKKQPKYIGTLLAQAKIREVENERIRERRLLHERKADDALYGDKE-KLVSASYKRKLQEMKRWDEEDARLANLEDRDDVTKQGEHAMAGFYANL-NKNIAMGGSTA-NARSAYTA 209          
BLAST of mRNA_P-fluviatile_contig8.14617.1 vs. uniprot
Match: T0QM91_SAPDV (DUF2040 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QM91_SAPDV)

HSP 1 Score: 132 bits (332), Expect = 6.780e-32
Identity = 88/167 (52.69%), Postives = 110/167 (65.87%), Query Frame = 1
Query:  253 EEALDADPSVFDYDRVYDGMKESRESKVAAAVVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFERKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTG---MSGFYSNLITKNIAMGGDVEKSANSAFTAG-----AKRHKVTDD 729
            +EAL +DP+ FDYD VYD M+  R  + AA  V       Q KYI  LL++AK+R +E DRI ER+L KEREE DK+ G+   KF+TS+YK+KLME K+WE +       E   DVTK G   M+GFY+NL+T NIAMGGDVEK A SA+T G     +KR KV DD
Sbjct:   64 QEALASDPNAFDYDGVYDSMQAERVKQKAAKKVQGVP---QSKYINVLLEKAKVREIEHDRIRERRLLKEREEDDKIHGDKE-KFITSSYKRKLMEAKRWEEEDARLAAIEDAQDVTKRGELGMAGFYANLLTNNIAMGGDVEK-ATSAYTTGHISEASKRQKVVDD 225          
BLAST of mRNA_P-fluviatile_contig8.14617.1 vs. uniprot
Match: A0A7S4E5L4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5L4_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.360e-31
Identity = 79/181 (43.65%), Postives = 118/181 (65.19%), Query Frame = 1
Query:  193 VNKRLAAISAKQEKQAKKEYEEALDADPSVFDYDRVYDGMKESRESKVAAAVVAHEKEKRQP--KYIGNLLKQAKMRAVESDRIFERKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTGMSGFYSNLITKNIAMGGDVEKSANSAFTAGAKRHKVTDD 729
            V +++  + A Q K+A  +  +A   DPS++DYD VYD MKE    K++A          +P  +YIG+L + AK+R  E DR++ER+L KE +EQDK     T +FVT+AYKK+L E +KW+ + +  DE E+R     +GM+GFYSNL+T+NIA G DVEK+A S++T G++R+   D+
Sbjct:   52 VAQQMRDLGAAQRKRAXXQAAQAAAVDPSIYDYDGVYDQMKEDERKKISARSGLSNTNHSKPGARYIGSLKQAAKVREREFDRVYERQLLKE-QEQDKDTYGDTERFVTAAYKKQLQESRKWDAEDRRMDEVEERTSAQTSGMAGFYSNLLTRNIAAGADVEKAAVSSYTHGSRRNAFVDE 231          
BLAST of mRNA_P-fluviatile_contig8.14617.1 vs. uniprot
Match: A0A1V9ZKX0_9STRA (DUF2040 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKX0_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.590e-31
Identity = 85/159 (53.46%), Postives = 109/159 (68.55%), Query Frame = 1
Query:  235 QAKKEYEEALDADPSVFDYDRVYDGMKESRESKVAAAVVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFERKLQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDVTKTG---MSGFYSNLITKNIAMGGDVEKSANSAFTAG 702
            +A++  +EAL +DP+VFDYD VYD M+  R  + AA  V       Q KYI  LL++AK+R +E DRI ER+L KEREE DKL G+ T KF+TS+YK+KLME K+WE +     E E   DVTK G   M+GFY+NL+T NIAMGG +EK A SA+T G
Sbjct:   59 KAERAVQEALASDPNVFDYDGVYDSMQAERVKQKAAKKVEGVP---QSKYINVLLEKAKIREIEHDRIRERRLLKEREEDDKLHGD-TEKFITSSYKRKLMEAKRWEEEDARLAEIEAAQDVTKRGELGMAGFYANLLTNNIAMGGTIEK-ATSAYTTG 212          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2R5_ECTSI1.350e-14364.80DUF2040 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YZI8_9STRA4.180e-5449.80Coiled-coil domain-containing protein 55-domain co... [more]
A0A7S1XVS8_9STRA7.770e-3857.42Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3HBP6_9STRA1.740e-3442.13Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
W7TFP5_9STRA1.080e-3340.00DUF2040 domain-containing protein n=2 Tax=Monodops... [more]
A0A7R9YG81_9STRA1.700e-3343.72Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A662Y6L8_9STRA3.160e-3248.65DUF2040 domain-containing protein n=2 Tax=Nothophy... [more]
T0QM91_SAPDV6.780e-3252.69DUF2040 domain-containing protein n=1 Tax=Saproleg... [more]
A0A7S4E5L4_9STRA1.360e-3143.65Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1V9ZKX0_9STRA1.590e-3153.46DUF2040 domain-containing protein n=1 Tax=Achlya h... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3224272..3226653 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score433.7
Seed ortholog evalue9.6e-119
Seed eggNOG ortholog2880.D7G2R5
Preferred nameNSRP1
KEGG koko:K07752,ko:K11414,ko:K13206,ko:K14437,ko:K20526
GOsGO:0000375,GO:0000377,GO:0000381,GO:0000398,GO:0002119,GO:0002164,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006928,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009791,GO:0009987,GO:0010467,GO:0010468,GO:0016070,GO:0016071,GO:0016477,GO:0016604,GO:0016607,GO:0019219,GO:0019222,GO:0031323,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0040011,GO:0040039,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043484,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045292,GO:0046483,GO:0048024,GO:0048856,GO:0048870,GO:0050684,GO:0050789,GO:0050794,GO:0051171,GO:0051179,GO:0051252,GO:0051674,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1903311,GO:1990904
EggNOG free text desc.mRNA binding
EggNOG OGsKOG2117@1,KOG2117@2759
EC3.4.17.22,3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03036,ko03041,ko04131
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionDomain of unknown function DUF2040
Ec32 orthologEc-11_003220.1
Exons5
Model size1251
Cds size1251
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14617.1prot_P-fluviatile_contig8.14617.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3224272..3226653 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817256.9797137-CDS-P-fluviatile_contig8:3224271..32245981622817256.9797137-CDS-P-fluviatile_contig8:3224271..3224598Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3224272..3224598 -
1693571760.6843374-CDS-P-fluviatile_contig8:3224271..32245981693571760.6843374-CDS-P-fluviatile_contig8:3224271..3224598Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3224272..3224598 -
1622817256.9934843-CDS-P-fluviatile_contig8:3224670..32249741622817256.9934843-CDS-P-fluviatile_contig8:3224670..3224974Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3224671..3224974 -
1693571761.033693-CDS-P-fluviatile_contig8:3224670..32249741693571761.033693-CDS-P-fluviatile_contig8:3224670..3224974Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3224671..3224974 -
1622817257.0042713-CDS-P-fluviatile_contig8:3225413..32255531622817257.0042713-CDS-P-fluviatile_contig8:3225413..3225553Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3225414..3225553 -
1693571761.0506463-CDS-P-fluviatile_contig8:3225413..32255531693571761.0506463-CDS-P-fluviatile_contig8:3225413..3225553Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3225414..3225553 -
1622817257.0190594-CDS-P-fluviatile_contig8:3225863..32260231622817257.0190594-CDS-P-fluviatile_contig8:3225863..3226023Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3225864..3226023 -
1693571761.0628135-CDS-P-fluviatile_contig8:3225863..32260231693571761.0628135-CDS-P-fluviatile_contig8:3225863..3226023Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3225864..3226023 -
1622817257.0323176-CDS-P-fluviatile_contig8:3226333..32266531622817257.0323176-CDS-P-fluviatile_contig8:3226333..3226653Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3226334..3226653 -
1693571761.0713663-CDS-P-fluviatile_contig8:3226333..32266531693571761.0713663-CDS-P-fluviatile_contig8:3226333..3226653Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3226334..3226653 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14617.1

>prot_P-fluviatile_contig8.14617.1 ID=prot_P-fluviatile_contig8.14617.1|Name=mRNA_P-fluviatile_contig8.14617.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=417bp
MRKSGVKFGLIGTASSLKKGAGRVSRPIGSKPVPHRPPPGATSVFDTNSD
DEEGPKGDLDGVAAVNKRLAAISAKQEKQAKKEYEEALDADPSVFDYDRV
YDGMKESRESKVAAAVVAHEKEKRQPKYIGNLLKQAKMRAVESDRIFERK
LQKEREEQDKLEGEATMKFVTSAYKKKLMEQKKWELQQQLEDEREQRNDV
TKTGMSGFYSNLITKNIAMGGDVEKSANSAFTAGAKRHKVTDDYEMRDGN
DRSAAARKGHQAGAGRVAADIGGDGSATPEGEGSEEAAAPTARMVDPRAA
ESKRNDDAGRSASAGRRREEHATGGTVKRARLEQVEAGGAGGGGESKTGS
DNGTAGKNTQQQQQHQQEGRNDERTAEEKEAAEELEKARQSAEAKAKKEA
TVKAARERFLARKKKS*
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mRNA from alignment at P-fluviatile_contig8:3224272..3226653-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14617.1 ID=mRNA_P-fluviatile_contig8.14617.1|Name=mRNA_P-fluviatile_contig8.14617.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2382bp|location=Sequence derived from alignment at P-fluviatile_contig8:3224272..3226653- (Porterinema fluviatile SAG_2381)
ATGCGAAAATCGGGGGTCAAGTTTGGCTTGATCGGGACAGCTTCCTCGCT CAAGAAGGGAGCAGGGCGAGTGTCAAGACCGATCGGCTCGAAGCCCGTGC CTCACCGCCCCCCTCCAGGTGCAACGTCGGTGTTTGACACCAACTCTGAC GACGAGGAAGGTCCCAAGGGCGACCTCGATGGAGTGGCGGCGGTGAACAA GAGGTTGGCGGCGATCTCGGCCAAGCAAGAGAAGCAGGCCAAGAAGGAGT ACGAGGAAGCTCTTGATGCCGACCCGTCGGTTTTCGATTACGATCGGGTG TACGACGGCATGAAAGAGAGGTGAGTACAGTCGTCGTCGCCTGGCTCGAG CAAGAGATTGCTGTGTTGCCTTTCGTTCCAGCATTGCCAACCCCCGGACG ATTTGGCCGTCGGAGCGGGCGGCGAAAAGTTTCATGTGGATTGTTTCCCT TATTATGCCAAAAACGTCAGGGCTATGGGATCAATGACCACACGAAACCG CAGGCCGTCGTCGGCCGAGTGCAGATGCTGTCACACAAATGCTGAAGGCG ATGTATCGCTGGATCCTTCATGACGCTTCACGACCACAACGCCCTCGAAT TTTGCGCACCGTCTGTCCACTTTGCTGCAGCCGCGAGTCCAAGGTTGCTG CCGCGGTAGTCGCGCACGAGAAGGAGAAGAGGCAGCCCAAGTATATCGGC AACCTCCTCAAGCAGGCCAAGATGAGGGCGGTCGAGTCTGATCGCATCTT CGAGAGGAAGCTTCAGAAAGAGCGAGAGGAGCAGGATAAGGTAAGAGATA AGGACCGGTCATTGCTTGGTTGCCGATGCTGCTTCAGTTTTCTCCCCTCG TGTTGCGTTGCTTCAGTTGCTTCACACCAATCAAACCCTGTGCTGCACGC ATTGCATGCGCACTGCAGTTTTGCGCAACCTTCTCGTGTCTGATCTCTCA AGCCGCGCACAAGCTACGCCCGCCACAGTAATGAGAGGTATACAGCCAAG GGGTCCAGATTATAAATGTCGGATGCATCGGGCACCCGCCACCGCTCCCT TGCTGATCACTCACGCATGCGGCACAATCGCGTTCCACCTTGTGGTGCAG TTGGAGGGCGAGGCGACGATGAAGTTCGTCACGTCGGCATACAAGAAGAA GCTCATGGAGCAGAAGAAGTGGGAGCTCCAGCAGCAGCTGGAGGACGAGA GGGAGCAGCGCAACGACGTGACCAAGACGGGCATGAGTGGGTACGTGCTT GTCGGCTTTATTTCTGTTCTACTAAGACTATTCGGGGGGTGTCAGCCTCG GATTGGTGAATGCTTGACCTGGGCGGTGTTTTTTTCGTTTTCTCTGCTCT ACTGCCAGGAAAGACAGGACGAGAAAGTGGTTGGATGCCATATCTGTATC TCTTCAGAAGTTCACTAAGACGCAGCCCCGGCTCGGCCAGTAGCCATCAT CAGTGCTTACTCCCTTTTTTATCTCCGATAATCTTTTATCTGCTCGTTGC CATCCCCTCGGCCGACCACCACACCGACTTGGATTATGTCCTTAAACGCG CACCATATGGCTCTATCCCCAATCCTCGCTGCCATGGCCGTCGCGCACCC TACCCCTGCCCTTTCCTTGAATCGTCCCTATTTCCTCGACATGCGATCTC TCCCTTTCTTTTGCCTTTGACACTTGCAGCTTCTACTCAAACCTCATCAC GAAGAACATCGCAATGGGCGGCGACGTCGAGAAGTCTGCCAACAGCGCCT TCACAGCAGGCGCCAAGAGACATAAAGTCACAGATGACTACGAGATGCGG GACGGAAACGACAGGTCTGCAGCCGCGAGGAAGGGCCATCAAGCCGGCGC CGGTAGGGTCGCCGCCGATATCGGAGGTGACGGTAGCGCCACCCCCGAGG GTGAGGGCAGTGAGGAGGCCGCTGCTCCGACTGCTAGGATGGTTGACCCT CGGGCTGCAGAATCGAAGAGAAATGACGATGCCGTCGGCCGCGAAGAAGG GCGGGACGGGGCAAGCGGCGAGCGAGAATCGGAGGCCGCCGGATATGGGC AGGAGGGGCGCAGCGCAAGCGCAGGCCGGCGACGAGAAGAACATGCGACT GGGGGCACCGTGAAGCGGGCCCGCTTGGAACAGGTGGAGGCGGGGGGAGC GGGAGGGGGGGGGGAGTCAAAGACGGGGTCTGACAACGGCACAGCCGGCA AAAATACCCAGCAACAGCAACAGCACCAGCAGGAGGGGCGAAACGACGAG CGTACAGCCGAGGAGAAGGAGGCGGCAGAGGAGCTGGAGAAGGCGCGGCA GTCTGCGGAGGCTAAGGCGAAGAAGGAGGCGACCGTGAAGGCGGCCAGGG AGCGTTTTCTCGCGAGAAAGAAAAAGTCGTGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:3224272..3226653-

>mRNA_P-fluviatile_contig8.14617.1 ID=mRNA_P-fluviatile_contig8.14617.1|Name=mRNA_P-fluviatile_contig8.14617.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2502bp|location=Sequence derived from alignment at P-fluviatile_contig8:3224272..3226653- (Porterinema fluviatile SAG_2381)
ATGCGAAAATCGGGGGTCAAGTTTGGCTTGATCGGGACAGCTTCCTCGCT
CAAGAAGGGAGCAGGGCGAGTGTCAAGACCGATCGGCTCGAAGCCCGTGC
CTCACCGCCCCCCTCCAGGTGCAACGTCGGTGTTTGACACCAACTCTGAC
GACGAGGAAGGTCCCAAGGGCGACCTCGATGGAGTGGCGGCGGTGAACAA
GAGGTTGGCGGCGATCTCGGCCAAGCAAGAGAAGCAGGCCAAGAAGGAGT
ACGAGGAAGCTCTTGATGCCGACCCGTCGGTTTTCGATTACGATCGGGTG
TACGACGGCATGAAAGAGAGATGCGAAAATCGGGGGTCAAGTTTGGCTTG
ATCGGGACAGCTTCCTCGCTCAAGAAGGGAGCAGGGCGAGTGTCAAGACC
GATCGGCTCGAAGCCCGTGCCTCACCGCCCCCCTCCAGGTGCAACGTCGG
TGTTTGACACCAACTCTGACGACGAGGAAGGTCCCAAGGGCGACCTCGAT
GGAGTGGCGGCGGTGAACAAGAGGTTGGCGGCGATCTCGGCCAAGCAAGA
GAAGCAGGCCAAGAAGGAGTACGAGGAAGCTCTTGATGCCGACCCGTCGG
TTTTCGATTACGATCGGGTGTACGACGGCATGAAAGAGAGCCGCGAGTCC
AAGGTTGCTGCCGCGGTAGTCGCGCACGAGAAGGAGAAGAGGCAGCCCAA
GTATATCGGCAACCTCCTCAAGCAGGCCAAGATGAGGGCGGTCGAGTCTG
ATCGCATCTTCGAGAGGAAGCTTCAGAAAGAGCGAGAGGAGCAGGATAAG
CCGCGAGTCCAAGGTTGCTGCCGCGGTAGTCGCGCACGAGAAGGAGAAGA
GGCAGCCCAAGTATATCGGCAACCTCCTCAAGCAGGCCAAGATGAGGGCG
GTCGAGTCTGATCGCATCTTCGAGAGGAAGCTTCAGAAAGAGCGAGAGGA
GCAGGATAAGTTGGAGGGCGAGGCGACGATGAAGTTCGTCACGTCGGCAT
ACAAGAAGAAGCTCATGGAGCAGAAGAAGTGGGAGCTCCAGCAGCAGCTG
GAGGACGAGAGGGAGCAGCGCAACGACGTGACCAAGACGGGCATGAGTGG
TTGGAGGGCGAGGCGACGATGAAGTTCGTCACGTCGGCATACAAGAAGAA
GCTCATGGAGCAGAAGAAGTGGGAGCTCCAGCAGCAGCTGGAGGACGAGA
GGGAGCAGCGCAACGACGTGACCAAGACGGGCATGAGTGGCTTCTACTCA
AACCTCATCACGAAGAACATCGCAATGGGCGGCGACGTCGAGAAGTCTGC
CAACAGCGCCTTCACAGCAGGCGCCAAGAGACATAAAGTCACAGATGACT
ACGAGATGCGGGACGGAAACGACAGGTCTGCAGCCGCGAGGAAGGGCCAT
CAAGCCGGCGCCGGTAGGGTCGCCGCCGATATCGGAGGTGACGGTAGCGC
CACCCCCGAGGGTGAGGGCAGTGAGGAGGCCGCTGCTCCGACTGCTAGGA
TGGTTGACCCTCGGGCTGCAGAATCGAAGAGAAATGACGATGCCCTTCTA
CTCAAACCTCATCACGAAGAACATCGCAATGGGCGGCGACGTCGAGAAGT
CTGCCAACAGCGCCTTCACAGCAGGCGCCAAGAGACATAAAGTCACAGAT
GACTACGAGATGCGGGACGGAAACGACAGGTCTGCAGCCGCGAGGAAGGG
CCATCAAGCCGGCGCCGGTAGGGTCGCCGCCGATATCGGAGGTGACGGTA
GCGCCACCCCCGAGGGTGAGGGCAGTGAGGAGGCCGCTGCTCCGACTGCT
AGGATGGTTGACCCTCGGGCTGCAGAATCGAAGAGAAATGACGATGCCGG
GCGCAGCGCAAGCGCAGGCCGGCGACGAGAAGAACATGCGACTGGGGGCA
CCGTGAAGCGGGCCCGCTTGGAACAGGTGGAGGCGGGGGGAGCGGGAGGG
GGGGGGGAGTCAAAGACGGGGTCTGACAACGGCACAGCCGGCAAAAATAC
CCAGCAACAGCAACAGCACCAGCAGGAGGGGCGAAACGACGAGCGTACAG
CCGAGGAGAAGGAGGCGGCAGAGGAGCTGGAGAAGGCGCGGCAGTCTGCG
GAGGCTAAGGCGAAGAAGGAGGCGACCGTGAAGGCGGCCAGGGAGCGTTT
TCTCGCGAGAAAGAAAAAGTCGTGAGGGCGCAGCGCAAGCGCAGGCCGGC
GACGAGAAGAACATGCGACTGGGGGCACCGTGAAGCGGGCCCGCTTGGAA
CAGGTGGAGGCGGGGGGAGCGGGAGGGGGGGGGGAGTCAAAGACGGGGTC
TGACAACGGCACAGCCGGCAAAAATACCCAGCAACAGCAACAGCACCAGC
AGGAGGGGCGAAACGACGAGCGTACAGCCGAGGAGAAGGAGGCGGCAGAG
GAGCTGGAGAAGGCGCGGCAGTCTGCGGAGGCTAAGGCGAAGAAGGAGGC
GACCGTGAAGGCGGCCAGGGAGCGTTTTCTCGCGAGAAAGAAAAAGTCGT
GA
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