mRNA_P-fluviatile_contig8.14518.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14518.1
Unique NamemRNA_P-fluviatile_contig8.14518.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig8.14518.1 vs. uniprot
Match: D7G620_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G620_ECTSI)

HSP 1 Score: 432 bits (1111), Expect = 1.980e-142
Identity = 246/439 (56.04%), Postives = 295/439 (67.20%), Query Frame = 3
Query:  186 LVSSRLGPLAIGAAVAAGAGAGT---PGGKYEALFKTPWNGES---GLVHLEHVNVNIPRHDPAKRFYFHFLGFSPDTRRAQNIGKGSGTMWANMGTTQIHLPEGDPQVVPGTIGLIYDPSDLTEVFSRLRGAKDETGLDRSGEVTVNALEGTKFAWRESGSEEGKDDAAAATTLEVTCPYGRLVRADRALVSNRRYSGGARIVMTRNVFNLHTRTSVMSALDPRGGRLPNTPSAEH--RPLGLGIGYLSLRVKPGTSGGIARFYREIFDSEVEEIGDG-----------SGGRDRSCPTAEEGETGAG----TSWHANEGAAKGAVVRVGPVQYLAFMEGEEA--LPEEYDGHHICVYLTEEGGFRRSFILAEKRGLVFVNPRRNFGKADTLEKALEEKQFRIKNMVDPSSGDLLHVLEHEVRSVTHPSYPVGRDLSA 1427
            LVS  L P A GAA AAGA   T   P   YE LFK+PWN ++   GL HLEHVNV IP HDPAK  Y+  LGF+PD RRA NIGKGSGT+WAN+G+TQIHLPEG+PQVVPGTIGL+Y  SDL EV +RL       G + + +   NALEGTKFAWRE   E G++       ++VTCPYG + R     +  R+ S                      ALDPRGGRLPN P+       LGLGI Y+S RV+PGT+ GIARFYRE+F +E +E+G             S G D  C   +EG++G G    T+  A++     AVVRVGPVQ+LAF+E E+   L +EYDGHHICVYL EEG FRRSF  AE+RGLVFVNPRRNFGKADTLEKALEEKQ+RIK++VDP++G+LLHVLEHE+RS++HPSYPV RDLSA
Sbjct:    7 LVSVFLAPYAAGAADAAGASGATSTGPAAHYETLFKSPWNEDNNKHGLQHLEHVNVCIPSHDPAKHLYYDILGFAPDARRAHNIGKGSGTIWANIGSTQIHLPEGEPQVVPGTIGLVYGSSDLAEVIARLTENAITNGNENNRK---NALEGTKFAWREEKEEGGEETGY----VDVTCPYGNVYR-----LHKRKPSSSTIAPEATQAAXXXXXXXXXXALDPRGGRLPNVPAGGQGSSSLGLGISYVSFRVRPGTAAGIARFYRELFGAEAQEMGGXXXXXXXXXXXXSSGED-VCSVTQEGDSGKGLRCSTATEADKRRGTAAVVRVGPVQHLAFVEEEDEALLQQEYDGHHICVYLPEEG-FRRSFEEAERRGLVFVNPRRNFGKADTLEKALEEKQYRIKDLVDPATGELLHVLEHEIRSISHPSYPVARDLSA 431          
BLAST of mRNA_P-fluviatile_contig8.14518.1 vs. uniprot
Match: A0A2E4NKT1_9PROT (Uncharacterized protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4NKT1_9PROT)

HSP 1 Score: 127 bits (318), Expect = 8.520e-29
Identity = 100/367 (27.25%), Postives = 143/367 (38.96%), Query Frame = 3
Query:  303 SGLVHLEHVNVNIPRHDPAKRFYFHFLGFSPDTRRAQNIGKGSGTMWANMGTTQIHLPEGDPQVVPGTIGLIYDPSDLTEVFSRLRGAKDETGLDRSGEVTVNALEGTKFAWRESGSEEGKDDAAAATTLEVTCPYGRLVRADRALVSNRRYSGGARIVMTRNVFNLHTRTSVMSALDPRGGRLPNTPSAEHRPLGLGIGYLSLRVKPGTSGGIARFYREIFDSEVEEIGDGSGGRDRSCPTAEEGETGAGTSWHANEGAAKGAVVRVGPVQYLAFMEGEEALPEEYDGHHICVYLTEEGGFRRSFILAEKRGLVFVNPRRNFGKADTLEKALEEKQFRIKNMVDPSSGDLLHVLEHEVRSVTHPSY 1403
            + +V LEH NV +P    A  FY   +GF+ D      +      MW N+G TQIH+P G PQ +PG  G+I    DL  +  RL   K +             L GT+F +           + +   L+V CP+G   R                                           P  P+ +H P  LGI Y+    +PG+S GIARFYREI  ++V                               +     A +  G  Q + F E ++ +P  YDGHH+ +YL +                 F  P +     + + +   + Q+R KN++D  SG  LH LEHEVRS+THP Y
Sbjct:   13 ANIVGLEHTNVKVPDQRLATLFYVVGMGFTRDPYMTPGVVN----MWMNVGKTQIHMPTGKPQRIPGHTGIIVP--DLKSLKKRLEAVKQD-------------LRGTQFKF-----------STSRNYLDVICPWGNAYRC-----------------------------------------FP--PNRKHGPASLGIRYVEFDSRPGSSEGIARFYREIMGAKVA----------------------------VRKAGGIAAQIESGYHQLMIFRETDKKIPR-YDGHHVQIYLAD-----------------FSGPHKALMALNLISQESNQFQYRFKNIIDLDSGKKLHTLEHEVRSMTHPLY 260          
BLAST of mRNA_P-fluviatile_contig8.14518.1 vs. uniprot
Match: A0A2E6Q3B8_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6Q3B8_9PROT)

HSP 1 Score: 122 bits (306), Expect = 3.420e-27
Identity = 102/373 (27.35%), Postives = 144/373 (38.61%), Query Frame = 3
Query:  303 SGLVHLEHVNVNIPRHDPAKRFYFHFLGFSPDTRRAQNIGKGSGTMWANMGTTQIHLPEGDPQVVPGTIGLIYDPSDLTEVFSRLRGAKDETGLDRSGEVTVNALEGTKFAWRESGSEEGKDDAAAATTLEVTCPYGRLVRADRALVSNRRYSGGARIVMTRNVFNLHTRTSVMSALDPRGGRLPNTPSAEHRPLGLGIGYLSLRVKPGTSGGIARFYREIFDSEVEEIGDGSGGRDRSCPTAEEGETGAGTSWHANEGAAKGAVVRVGPVQYLAFMEGEEALPEEYDGHHICVYLTEEGGFRRSFILAEKRGLVFVNPRRNFGKADTLEKALEEKQFRIKNMVDPSSGDLLHVLEHEVRSVTHPSYPVGRDL 1421
            +  V LEH N+ +P    A  FY   +GF+ D      +      MW N+G TQIH+P G PQ++PG  G+     DL  + +RL   K +             L GTKF +           AA+   ++VTCP+G   R                                          +P  PS +     LGI Y+    +PGTS GIARFYRE+  ++                                +     A V  G  Q + F E  + +P  +DGHHI VYL                   F  P +   + D + +   + Q+R   +VDP +G  LH LEHE+RS+THP Y  GR +
Sbjct:   13 ANFVGLEHTNIKVPDQRLATIFYVVGMGFTRDPYMVPGVTN----MWMNIGRTQIHMPTGKPQIIPGHTGITVP--DLKALKNRLEAVKKD-------------LRGTKFKF-----------AASRNRVDVTCPWGNKYRC-----------------------------------------MP--PSDKFGRTTLGIRYVEFDSRPGTSDGIARFYREVMGAKAT----------------------------VRKAGGIAAHVESGYHQSMIFRETTKKIPR-FDGHHIQVYLAN-----------------FSGPHKALQELDLVSEESNQYQYRFLYIVDPDTGKRLHTLEHEIRSMTHPLY--GRPM 264          
BLAST of mRNA_P-fluviatile_contig8.14518.1 vs. uniprot
Match: A0A812Q3B0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812Q3B0_9DINO)

HSP 1 Score: 109 bits (273), Expect = 2.630e-22
Identity = 106/388 (27.32%), Postives = 163/388 (42.01%), Query Frame = 3
Query:  309 LVHLEHVNVNIPRHDPAK-RFYFHFLGFSPDTRRAQNI--------GKGSGTMWANMGTTQIHLPEGDP-----QVVPGTIGLIYDPSDLTEVFSRLRGAKDETGLDRSGEVTVNALEGTKFAWRESGSEEGKDDAAAATTLEVTCPYGRLVRADRALVSNRRYSGGARIVMTRNVFNLHTRTSVMSALDPRGGRLPNTPSAEHRPLGL---------GIGYLSLRVKPGTSGGIARFYREIFDSEVEEIGDGSGGRDRSCPTAEEGETGAGTSWHANEGAAKGAVVRVGPVQYLAFMEGEEALPEEYDGHHICVYLTEEGGFRRSFILAEKRGLVFVNPRRNFGKADTLEKALEEKQFRIKNMVDPSSGDLLHVLEHEVRSVTHPSY 1403
            L+ LEH+NVN+P  D A  RF+   +G + D+R AQ +        G   G +WAN G  QIH+P G+P     Q  PG +GL Y  +D+  + + LR A                  G  F+      +           L+ T P G  +           Y+ G R                 + L PRG    +  +A  + LGL         G+ Y+ L+   G++ G+ARFY+ +FD++ E      G     C             W           V +G  Q+L + E    +P  YDG+HI +Y+     F  ++  A   G+V+ NPR      D+ + A+   +FRI  MVDP S  +L  +EHE+R+++H  +
Sbjct:   41 LISLEHLNVNVPEWDSANDRFWLKAMGLALDSR-AQGVCQTVQSAGGSLKGLVWANAGLQQIHMPLGEPPPMEAQKPPGVVGLAY--ADIMGLRATLREA------------------GVNFSPVPLKDQMSNLQGVGPVALQCTSPTGVKI-----------YAHGIRSE---------------TWLTPRGWM--DCTAARDQGLGLPSEEASQCMGMPYIRLQCPVGSTEGLARFYKHVFDTQSEFR---QGAEGLEC-------------W-----------VPIGVGQWLIYQEIAAEVP--YDGYHIAIYVNR---FVSAYRAARGLGIVWNNPRFPNLTYDSEDDAIRHHEFRILKMVDPESSQVLCEVEHEIRALSHGGF 347          
BLAST of mRNA_P-fluviatile_contig8.14518.1 vs. uniprot
Match: A0A812UC60_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812UC60_SYMPI)

HSP 1 Score: 107 bits (267), Expect = 1.680e-21
Identity = 114/417 (27.34%), Postives = 177/417 (42.45%), Query Frame = 3
Query:  309 LVHLEHVNVNIPR-HDPAKRFYFHFLGFSPDTRR---AQNIGKGSGTM----WANMGTTQIHLPEGDP-----QVVPGTIGLIYDPSDLTEVFSRLRGAKDETGLDRSGEVTVNALEGTKFAWRESGSEEGKDDAAAATTLEVTCPYGRLVRADRALVSNRRYSGGARIVMTRNVFNLHTRTSVMSALDPRGGRLPNTPSAEHRPLGL---------GIGYLSLRVKPGTSGGIARFYREIFDSEVEEIGDGSGGRDRSCPTAEEGETGAGTSWHANEGAAKGAVVRVGPVQYLAFMEGEEALPEEYDGHHICVYLTEEGGFRRSFILAEKRGLVFVNPRRNFGKADTLEKALEEKQFRIKNMVDPSSGDLLHVLEHEVRSVTHPSYPVGRDLSAE*RGWPVGR*CVCAWCLEDSVD 1493
            LV LEH+NVN+P  +   + F+F  +GF+PD+R     Q +    G+M    WAN G  QIH+P G+P     Q   G +GL Y   D+  + + LR A    G++ SG    + +           +  G   AA    L+ T P G  +           Y+ G R                 S L PRG    +  +A  + LGL         G+ Y+ L+   G++ G+A+ Y+ +F++E E      GG    C             W           V +G  Q+L + E    +P  YDG+HI +Y+     F  ++  A++ G+V+ NPR      ++   AL   +FRI  ++DP S  LL  +EHEVRS++H  +                  C  +W  +D +D
Sbjct:   41 LVSLEHLNVNVPEWNSENETFWFKAMGFAPDSRTQGVCQTVQSSGGSMKGLVWANAGLQQIHMPLGEPPPMEAQKPAGVVGLAYP--DILGLRATLRAA----GVNFSGVPLKDHM----------STLPGVGPAA----LQCTSPTGVKI-----------YAHGIR---------------AESWLTPRGWL--DCEAARKQQLGLPSEEASQCMGMPYIRLQCPLGSTEGLAKLYKRVFNTESEFRRGSEGGE---C-------------W-----------VPIGVGQWLIYQEIAGDIP--YDGYHIAIYVN---CFVDAYRAAKELGIVWNNPRFPGLSYNSEHDALRHHEFRILKLLDPDSLQLLCEVEHEVRSLSHTGF------------------CAKSWLEQDPLD 359          
BLAST of mRNA_P-fluviatile_contig8.14518.1 vs. uniprot
Match: A0A7S1NL54_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NL54_9EUGL)

HSP 1 Score: 106 bits (264), Expect = 1.220e-20
Identity = 67/161 (41.61%), Postives = 89/161 (55.28%), Query Frame = 3
Query:  261 GKYEALFKTPWNGESGLVHLEHVNVNIPRHDPAKRFYFHFLGFSPDTRRAQNIGKGSGTMWANMGTTQIHLPEGDPQVVPGTIGLIYDPSDLTEVFSRLRGAKDETGLDRSGEVTVNALEGTKFAWRESGSEEG-------KDDAAAATT---LEVTCPYG 713
            G   A+  TP    +G+  LEH+NVN+P+  PA  FYF  LG + D RRA NI +G GTMWAN+G +QIH+P GDPQV+PG + L Y PS L  V  RL GA     +D    + V+   G  +  RE+G+          + DA+  T    LE+ C  G
Sbjct:  166 GLQTAVSATP---TTGVSLLEHINVNVPQQQPAYDFYFGLLGCAVDPRRAANIAQGKGTMWANIGISQIHIPVGDPQVIPGVVNLTY-PS-LNAVRRRL-GAGPFRCIDVGSALEVHCPYGNVYVLRETGAPADPRGVQPIEGDASLGTGMAGLELRCKPG 320          
BLAST of mRNA_P-fluviatile_contig8.14518.1 vs. uniprot
Match: A0A6L7MSF5_9GAMM (VOC domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7MSF5_9GAMM)

HSP 1 Score: 87.0 bits (214), Expect = 3.740e-15
Identity = 77/274 (28.10%), Postives = 110/274 (40.15%), Query Frame = 3
Query:  582 LDRSGEVTVNALEGTKFAWRESGSEEGKDDAAAATTLEVTCPYGRLVRADRALVSNRRYSGGARIVMTRNVFNLHTRTSVMSALDPRGGRLPNTPSAEHRPLGLGIGYLSLRVKPGTSGGIARFYREIFDSEVEEIGDGSGGRDRSCPTAEEGETGAGTSWHANEGAAKGAVVRVGPVQYLAFMEGEEALPEEYDGHHICVYLTEEGGFRRSFILAEKRGLVFVNPRRNFGKADTLEKALEEKQFRIKNMVDPSSGDLLHVLEHEVRSVTHPSY 1403
            LDR   +    +EGT+FAWRE       +D  A   + VTCP+G  +R                                  A  P  G              LGI +  +RV  G+S GIARFYRE+F++    +G G       C                       A V +G  Q+L + E ++ LP  YDGHHI +Y++                  F  P     K D + +  ++ Q+R + +VDP SG++L  LEHEVRS+ HP +
Sbjct:   92 LDRIDRI----MEGTEFAWREV------NDGPAH--IAVTCPWGNDIR----------------------------------AYGPGFG------------TSLGIPFAEVRVPTGSSDGIARFYREVFNTPAR-VGQG-------C-----------------------AEVSMGGSQWLTYRETDDELPA-YDGHHIAIYVSN-----------------FSGPHSALAKHDLISEESDQHQYRFQTIVDPDSGNVLTELEHEVRSLKHPMF 258          
BLAST of mRNA_P-fluviatile_contig8.14518.1 vs. uniprot
Match: A0A535AXI2_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A535AXI2_9DELT)

HSP 1 Score: 87.0 bits (214), Expect = 3.920e-15
Identity = 63/192 (32.81%), Postives = 88/192 (45.83%), Query Frame = 3
Query:  837 PRGGRLPNTP-SAEHRPLGLGIGYLSLRVKPGTSGGIARFYREIFDSE--VEEIGDGSGGRDRSCPTAEEGETGAGTSWHANEGAAKGAVVRVGPVQYLAFMEGEEALPEEYDGHHICVYLTEEGGFRRSFILAEKRGLVFVNPRRNFGKADTLEKALEEKQFRIKNMVDPSSGDLLHVLEHEVRSVTHPSY 1403
            P G R    P S+    + LGI Y+   V PG + GI RFY  +  +    E   DG+ GR                             V++G  Q L F E EE L + YDGHHI +Y+     F R +   ++RGL+               + +E  QFR+K+++DP SGD L +LEHEVRS+ HP +
Sbjct:  114 PWGNRFQCYPASSRFGDMALGIPYVEFLVAPGRAAGIVRFYDRVLGAPGTTESGKDGAIGR-----------------------------VKIGRNQSLVFRETEEPL-KPYDGHHIAIYVAN---FSRPYSFLKQRGLI--------------SEEVENHQFRLKDVIDPESGDCLFLLEHEVRSLRHPMF 258          
BLAST of mRNA_P-fluviatile_contig8.14518.1 vs. uniprot
Match: UPI001AE4E6E8 (glyoxalase/bleomycin resistance/dioxygenase family protein n=1 Tax=Paraburkholderia sp. LEh10 TaxID=2821353 RepID=UPI001AE4E6E8)

HSP 1 Score: 86.3 bits (212), Expect = 7.740e-15
Identity = 73/225 (32.44%), Postives = 97/225 (43.11%), Query Frame = 3
Query:  309 LVHLEHVNVNIPRHDPAKRFYFHFLGFSPDTRRAQNIGKGSGTMWANMGTTQIHLPEGDPQVVPGTIGLIYDPSDLTEVFSRLRGAKDETGLDRSGEVTVNALEGTKFAWRESGSEEGKDDAAAATTLEVTCPYGRLVRADRALVSNRRYSGGARIVMTRNVFNLHTRTSVMSALDPRGGRLPNTPSAEHRPLGLGIGYLSLRVKPGTSGGIARFYREIFDSEVE 983
            LV LEHVNV +P    A  FY   LG + D      +  G   MW N+G +QIHLPEGDPQ + G +GL+        + +RLR  +               L+GT F W E      +DD      LEVTCP+G             RY+                       LDP   R    P ++   + LGI ++ L V  G++  IA FYRE+ D+ VE
Sbjct:   14 LVLLEHVNVTVPDQRLATAFYVSGLGLTRDPY----LMTGVTNMWINIGRSQIHLPEGDPQRLRGHVGLVVGKRQ--SLVARLRAVQP-------------VLDGTAFGWAE------RDDR-----LEVTCPWGN------------RYA----------------------CLDP-DARDAGAPWSD---IDLGIAFVQLDVPVGSAAPIAGFYRELLDASVE 170          
BLAST of mRNA_P-fluviatile_contig8.14518.1 vs. uniprot
Match: A0A7S0FSY4_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FSY4_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.190e-14
Identity = 73/234 (31.20%), Postives = 105/234 (44.87%), Query Frame = 3
Query:  309 LVHLEHVNVNIP--RHDPAKRFYFHFLGFSPDTRRAQNIGKGSGTMWANMGTTQIHLPEGDP--QVVPGTIGLIYDPSDLTEVFSRLRGAKDETGLDRSGEVTVNALEGTKFAWRESGSEEGKDDAAAATTLEVTCPYGRLVRADRALVSNRRYSGGARIVMTRNVFNLHTRTSVMSALDPRGGRLPNTPSAEHRPLGLGIGYLSLRVKPGTS-GGIARFYREIFDSEVEEIGD 995
            ++ L+H+N+N    RHD  K FYF  L  + D R+ +NI KGS T+WAN+G +Q HLPEG P  QV  G I L Y           L G ++        E   + L+GTKF   ++G +E          + +TCP+G   +                IV+                 DPRG +    PS      GL +  L++ V PG++  GIARFY  +  +   + GD
Sbjct:   51 ILILDHLNINHEKGRHDLLKAFYFDLLRCAVDPRKEENIAKGSKTLWANVGASQFHLPEGKPDAQVFDGLITLSYP---------NLEGLRERC----EDETIRSVLDGTKFRVEDTGGDE----------MHITCPFGSQFK----------------IVVEGE-----------GEKDPRGVQ-KGGPSE-----GLSMPDLTVYVPPGSNFAGIARFYDAVLGAPTLDCGD 228          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G620_ECTSI1.980e-14256.04VOC domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A2E4NKT1_9PROT8.520e-2927.25Uncharacterized protein n=2 Tax=Rhodospirillaceae ... [more]
A0A2E6Q3B8_9PROT3.420e-2727.35Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A812Q3B0_9DINO2.630e-2227.32Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A812UC60_SYMPI1.680e-2127.34Hypothetical protein n=1 Tax=Symbiodinium pilosum ... [more]
A0A7S1NL54_9EUGL1.220e-2041.61Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A6L7MSF5_9GAMM3.740e-1528.10VOC domain-containing protein n=1 Tax=Gammaproteob... [more]
A0A535AXI2_9DELT3.920e-1532.81Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
UPI001AE4E6E87.740e-1532.44glyoxalase/bleomycin resistance/dioxygenase family... [more]
A0A7S0FSY4_9STRA1.190e-1431.20Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:2212408..2216222 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score437.2
Seed ortholog evalue8.7e-120
Seed eggNOG ortholog2880.D7G620
EggNOG OGs2CYWV@1,2S6Y6@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionGlyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Ec32 orthologEc-11_004780.1
Exons7
Model size2090
Cds size1260
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817243.4690094-UTR-P-fluviatile_contig8:2212407..22130641622817243.4690094-UTR-P-fluviatile_contig8:2212407..2213064Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 2212408..2213064 -
1693571645.5764928-UTR-P-fluviatile_contig8:2212407..22130641693571645.5764928-UTR-P-fluviatile_contig8:2212407..2213064Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 2212408..2213064 -
1622817243.5532327-UTR-P-fluviatile_contig8:2216049..22162221622817243.5532327-UTR-P-fluviatile_contig8:2216049..2216222Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 2216050..2216222 -
1693571645.6613123-UTR-P-fluviatile_contig8:2216049..22162221693571645.6613123-UTR-P-fluviatile_contig8:2216049..2216222Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 2216050..2216222 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817243.4800894-CDS-P-fluviatile_contig8:2213064..22131661622817243.4800894-CDS-P-fluviatile_contig8:2213064..2213166Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2213065..2213166 -
1693571645.5894132-CDS-P-fluviatile_contig8:2213064..22131661693571645.5894132-CDS-P-fluviatile_contig8:2213064..2213166Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2213065..2213166 -
1622817243.4914112-CDS-P-fluviatile_contig8:2213478..22136061622817243.4914112-CDS-P-fluviatile_contig8:2213478..2213606Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2213479..2213606 -
1693571645.601977-CDS-P-fluviatile_contig8:2213478..22136061693571645.601977-CDS-P-fluviatile_contig8:2213478..2213606Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2213479..2213606 -
1622817243.5020242-CDS-P-fluviatile_contig8:2213932..22140621622817243.5020242-CDS-P-fluviatile_contig8:2213932..2214062Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2213933..2214062 -
1693571645.6102808-CDS-P-fluviatile_contig8:2213932..22140621693571645.6102808-CDS-P-fluviatile_contig8:2213932..2214062Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2213933..2214062 -
1622817243.512163-CDS-P-fluviatile_contig8:2214519..22148061622817243.512163-CDS-P-fluviatile_contig8:2214519..2214806Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2214520..2214806 -
1693571645.6181204-CDS-P-fluviatile_contig8:2214519..22148061693571645.6181204-CDS-P-fluviatile_contig8:2214519..2214806Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2214520..2214806 -
1622817243.5223932-CDS-P-fluviatile_contig8:2215012..22153181622817243.5223932-CDS-P-fluviatile_contig8:2215012..2215318Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2215013..2215318 -
1693571645.6259875-CDS-P-fluviatile_contig8:2215012..22153181693571645.6259875-CDS-P-fluviatile_contig8:2215012..2215318Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2215013..2215318 -
1622817243.532707-CDS-P-fluviatile_contig8:2215565..22157731622817243.532707-CDS-P-fluviatile_contig8:2215565..2215773Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2215566..2215773 -
1693571645.6341553-CDS-P-fluviatile_contig8:2215565..22157731693571645.6341553-CDS-P-fluviatile_contig8:2215565..2215773Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2215566..2215773 -
1622817243.5429292-CDS-P-fluviatile_contig8:2215950..22160491622817243.5429292-CDS-P-fluviatile_contig8:2215950..2216049Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2215951..2216049 -
1693571645.6463294-CDS-P-fluviatile_contig8:2215950..22160491693571645.6463294-CDS-P-fluviatile_contig8:2215950..2216049Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2215951..2216049 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14518.1prot_P-fluviatile_contig8.14518.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 2213065..2216049 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14518.1

>prot_P-fluviatile_contig8.14518.1 ID=prot_P-fluviatile_contig8.14518.1|Name=mRNA_P-fluviatile_contig8.14518.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=420bp
MCRLLVSSRLGPLAIGAAVAAGAGAGTPGGKYEALFKTPWNGESGLVHLE
HVNVNIPRHDPAKRFYFHFLGFSPDTRRAQNIGKGSGTMWANMGTTQIHL
PEGDPQVVPGTIGLIYDPSDLTEVFSRLRGAKDETGLDRSGEVTVNALEG
TKFAWRESGSEEGKDDAAAATTLEVTCPYGRLVRADRALVSNRRYSGGAR
IVMTRNVFNLHTRTSVMSALDPRGGRLPNTPSAEHRPLGLGIGYLSLRVK
PGTSGGIARFYREIFDSEVEEIGDGSGGRDRSCPTAEEGETGAGTSWHAN
EGAAKGAVVRVGPVQYLAFMEGEEALPEEYDGHHICVYLTEEGGFRRSFI
LAEKRGLVFVNPRRNFGKADTLEKALEEKQFRIKNMVDPSSGDLLHVLEH
EVRSVTHPSYPVGRDLSAE*
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mRNA from alignment at P-fluviatile_contig8:2212408..2216222-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14518.1 ID=mRNA_P-fluviatile_contig8.14518.1|Name=mRNA_P-fluviatile_contig8.14518.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3815bp|location=Sequence derived from alignment at P-fluviatile_contig8:2212408..2216222- (Porterinema fluviatile SAG_2381)
CACATGTCAAGCGTCAGGTACTGGCAAGCAGAGCAGCGGAGAGAGGGAAC CGAGGCCCACGTAAAGTTTCTGTTGGTGTGTGTAGGCCTGCGCTGGCTCA GCTTCCGTGTCGCGAAAGTGTCTCACATTACCTCTGTGAGTTTCCGTTGT GCTGCTGCAGACGTTTTGTTGACATGTGCAGGCTGCTCGTGTCTTCGAGG CTTGGTCCGCTTGCCATTGGTGCCGCTGTGGCTGCCGGTGCTGGTGCTGG CACTCCTGGTGGAAAATACGAGGTGAAGGATAGCTATGCGACGCTCAAGA CTGTGCTGCTACCTAGAATGACGCAATAATTGAAAATAAACTTGGTATTT GTACACAGAGAAGTTGCACCACAGGTGCGGCAGTCACAAACACTCCCGGC GTGCCTACACCACGTGACGTTGACGAAGTACTTTCGCCTCTCACTCCAGG CCCTCTTCAAAACTCCCTGGAATGGGGAAAGCGGGCTTGTCCACCTGGAG CACGTGAACGTGAACATTCCGAGACATGATCCAGCGAAGCGCTTCTACTT CCACTTCCTCGGATTCTCGCCCGATACGCGGAGGGCGCAGAACATCGGGA AAGGGAGCGGGACCATGTGGGCAAACATGGGAACAACTCAAATTCACCTT CCCGAGGGTATGCATTGAAGTGTGCCTCACGGAATTACACGAAGACAGGT GGAAGCAAGTCGGAGAGACGAGTACACCTGGAACCAGGAGTGGCACTTTT CGTGCCGATGTCAACCGCCGTATTCACGCGCTAGCTACATTCCCACCTAG GTGGGCACCAATTTGAAAAACCGAACTCACGATGGCGAAGTAAAACATGG AGTTGACCTCTCCTTTGCGTGCGTTTCCGTTCTTCCGACTGAATACAAAC GCAGGTGACCCCCAAGTTGTCCCCGGAACGATCGGGCTCATCTACGACCC CTCTGACCTGACCGAGGTGTTCTCCCGCCTCAGGGGCGCCAAAGACGAAA CCGGCCTCGACCGCAGTGGCGAGGTAACCGTCAATGCGCTCGAGGGGACC AAATTCGCGTGGCGAGAATCAGGGAGCGAGGAGGGAAAAGACGACGCCGC AGCTGCTACTACTCTCGAAGTCACGTGTCCCTACGGTAGGCTTGTGCGAG CAGACCGGGCTCTAGTTTCCAACAGGCGTTACAGCGGCGGCGCGCGCATC GTGATGACAAGTGCTGGCTCTACTAGTTTCTCTCCTCAGATGGATTGTCT CTTTTTCTTGTTAGCGCTTCACTAACATGCACTCTTCTCGGCAGCTGACA ACGGACGCTCCTGCATGTGCTCGTTTTCATTACCATCAGCTCCCGTCCCC CTTCCCTCTGCTCGACAACCACGGGGTGCGCCCGATCGTGATGCGCTCGC CACCCTTCCACTCAAGGAAACGTCTTTAACCTCCACACACGGACATCCGT GATGAGTGCACTCGATCCCCGGGGTGGGCGGCTGCCCAACACCCCCTCCG CCGAACACCGGCCCCTCGGGCTCGGCATCGGATACCTATCGCTCCGCGTG AAGCCGGGGACCAGCGGGGGCATCGCGCGCTTCTACCGGGAGATCTTCGA TTCAGAAGTGGAAGAGATTGGCGACGGGAGCGGCGGAAGAGATCGAAGTT GCCCCACAGCAGAAGAGGGGGAAACTGGTGCTGGAACATCTTGGCATGCT AACGTGAGGGGGCACGTTTTGCTAAGTGTTGGTCACCTACTCTTGTGTCT GCGACGCGGCTGGCTAGGGCGCAGGTGTACCTGCATCTTCGCTGGCGGCG GCGGCTTCGAGAGCAGCCGGAGACCACAGCAAAGAGCATATTCTACGGAC AGGCCGTCGTACTTTGTTATTGCCGTCGGGTGGAGAGTGGCGGATACTGT TTTATCTCTGCCGCCAATGTTTCCGTAGCCGCGGCGGGTGATGAGTGCCT GCACAAGTGGTTGTGCTTCTTCGGCTTCACAGGGTACGTTCAGGGTTCAC TTTGAGTTGGCAGGTGCAAACGCGCCTGATCGCCGACGAGCCAAGCATCG ACCGGCCCCGCCGTGAACCCAAAGATCCTGCTGGTCTCTCAGAGACCATG CCGCGCGAGGAAGTCTTCTTCATTCGCTCGGCTTATTTGTTTGTACTTGG GGTACCGCAGGAGGGAGCAGCAAAAGGGGCGGTTGTGAGAGTGGGACCCG TCCAATACCTGGCGTTCATGGAGGGAGAGGAGGCTCTACCGGAGGAGTAC GACGGCCACCACATCTGCGTTTACCTCACAGAAGAAGGTGGTTGGCACAG GTTTTGGCGGGACATCCTTTCACCATCGTAGCAAGAATGTTTCTGGAGTT CCTGTCTCGTGAACTTACTTTCCTGGCCCATGGACAAGACATGGCACGGC CTGAACCGATACGAAGCAGATTGCTAATCCTCCAAAGCCCGCGGCTTTCC TTGTTCTCTCACTCTCCCCCTCCCTCTTCGCGCGTCGGGTCTCTCGTCGT GTTTTCCCCCCCGTCCTCTCCACTGTCTGTCGCTACCTGTGCAAACCTGA TGCTGTTTTTCCTGACGGTTGTGACTGCTTGATTCTTCCCACGTGGAAAA AACTGCGGGTGTCCAGGCTTTCGTCGCAGCTTTATTCTAGCCGAGAAGAG GGGGCTCGTGTTCGTGAATCCGCGCAGGAACTTCGGCAAGGCGGACACCC TCGAGAAGGCCCTCGAGGAGAAGCAGTTTCGCATCAAGAACATGGTGAGG TGTCTGGTTGGGTTCCCTTCTGCCAAGAGCGCAAAAAACGTGCGAGAAAT AGTCCTCGAGGTTTTCGCCCTGATGCCTCTACCCGTGTCATCCCCGGTGT TGCCATGACTTTGCGATGAATCATCTCGTGGTGGGTGGTACTGCTGCAGG TCACGCAAATGATGGTCGGTTTTAACCCCAAACCCTCAGCACTTGCTAGT CTCTCCAATGCACCTCCGTTTTTCCTGAAACAGCACTCGTGCGCATGCCC GTTGCTGCCCGTTTCTGGATCCACCTCGCGCACGTGGGGTCGTTGGCGGG GGGTAGGTTGATCCGTCGAGCGGGGACCTTCTGCACGTGCTGGAACACGA GGTTAGAAGCGTGACCCACCCATCCTACCCCGTGGGGAGAGACCTGTCCG CTGAGTGACGCGGGTGGCCAGTAGGTCGTTGATGCGTGTGTGCATGGTGC TTGGAAGATTCCGTCGATCGTGAGAAGTGAGCTTCCGTGCGTGGGGGAGG TTTTCGGTTGGCTTCAAACGATGTACAGAGAGCTTGTTTGTTTTTACCTT CCTCGTTTTTCTGCATGTCGGGAGTTTTCGCCCACACTTGCCAAGTAAAG TGGTATGGATCACGTGTGGGGTTGGCAGTTTGGGATGAAGATGATTGTTG TCGTGGCACAAAACGTTTGTGATTGCCGTGAGAGCTCGACGTGCCCTGTC TACGGCGGGAAAATGCAGCGGCTGCAGAGCTCAATGCTTCCAGTAATTCA GCGGCAGTCCCACTTCCTTTTTGATGATGGATCGAATCAACCCAGATGTA TGAAGCGTGTTGCGTCTCCGACCCGCCTGATGGGCTGGGTTTCCGTGCGC CCACCTTCCATGCGCGTTTGCACATGTCACCACTGACTGCTACCACCGGA GCTTTCGAATCTGGTGGTCTGCGGTAATCAGAGCTGAACTTCGTAGATGT GGACGGGGTGATGCTGAACTTCGACATATTTATGGCCACACCCCCCCTCT CTTTCCCTCGTACACGATCTCAAAGTGAGGCGCTGAATGATAATAAAACC CGAGAGATGTCAACG
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:2212408..2216222-

>mRNA_P-fluviatile_contig8.14518.1 ID=mRNA_P-fluviatile_contig8.14518.1|Name=mRNA_P-fluviatile_contig8.14518.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2520bp|location=Sequence derived from alignment at P-fluviatile_contig8:2212408..2216222- (Porterinema fluviatile SAG_2381)
ATGTGCAGGCTGCTCGTGTCTTCGAGGCTTGGTCCGCTTGCCATTGGTGC
CGCTGTGGCTGCCGGTGCTGGTGCTGGCACTCCTGGTGGAAAATACGAGA
TGTGCAGGCTGCTCGTGTCTTCGAGGCTTGGTCCGCTTGCCATTGGTGCC
GCTGTGGCTGCCGGTGCTGGTGCTGGCACTCCTGGTGGAAAATACGAGGC
CCTCTTCAAAACTCCCTGGAATGGGGAAAGCGGGCTTGTCCACCTGGAGC
ACGTGAACGTGAACATTCCGAGACATGATCCAGCGAAGCGCTTCTACTTC
CACTTCCTCGGATTCTCGCCCGATACGCGGAGGGCGCAGAACATCGGGAA
AGGGAGCGGGACCATGTGGGCAAACATGGGAACAACTCAAATTCACCTTC
CCGAGGGCCCTCTTCAAAACTCCCTGGAATGGGGAAAGCGGGCTTGTCCA
CCTGGAGCACGTGAACGTGAACATTCCGAGACATGATCCAGCGAAGCGCT
TCTACTTCCACTTCCTCGGATTCTCGCCCGATACGCGGAGGGCGCAGAAC
ATCGGGAAAGGGAGCGGGACCATGTGGGCAAACATGGGAACAACTCAAAT
TCACCTTCCCGAGGGTGACCCCCAAGTTGTCCCCGGAACGATCGGGCTCA
TCTACGACCCCTCTGACCTGACCGAGGTGTTCTCCCGCCTCAGGGGCGCC
AAAGACGAAACCGGCCTCGACCGCAGTGGCGAGGTAACCGTCAATGCGCT
CGAGGGGACCAAATTCGCGTGGCGAGAATCAGGGAGCGAGGAGGGAAAAG
ACGACGCCGCAGCTGCTACTACTCTCGAAGTCACGTGTCCCTACGGTAGG
CTTGTGCGAGCAGACCGGGCTCTAGTTTCCAACAGGCGTTACAGCGGCGG
CGCGCGCATCGTGATGACAAGTGACCCCCAAGTTGTCCCCGGAACGATCG
GGCTCATCTACGACCCCTCTGACCTGACCGAGGTGTTCTCCCGCCTCAGG
GGCGCCAAAGACGAAACCGGCCTCGACCGCAGTGGCGAGGTAACCGTCAA
TGCGCTCGAGGGGACCAAATTCGCGTGGCGAGAATCAGGGAGCGAGGAGG
GAAAAGACGACGCCGCAGCTGCTACTACTCTCGAAGTCACGTGTCCCTAC
GGTAGGCTTGTGCGAGCAGACCGGGCTCTAGTTTCCAACAGGCGTTACAG
CGGCGGCGCGCGCATCGTGATGACAAGAAACGTCTTTAACCTCCACACAC
GGACATCCGTGATGAGTGCACTCGATCCCCGGGGTGGGCGGCTGCCCAAC
ACCCCCTCCGCCGAACACCGGCCCCTCGGGCTCGGCATCGGATACCTATC
GCTCCGCGTGAAGCCGGGGACCAGCGGGGGCATCGCGCGCTTCTACCGGG
AGATCTTCGATTCAGAAGTGGAAGAGATTGGCGACGGGAGCGGCGGAAGA
GATCGAAGTTGCCCCACAGCAGAAGAGGGGGAAACTGGTGCTGGAACATC
TTGGCATGCTAACGAAACGTCTTTAACCTCCACACACGGACATCCGTGAT
GAGTGCACTCGATCCCCGGGGTGGGCGGCTGCCCAACACCCCCTCCGCCG
AACACCGGCCCCTCGGGCTCGGCATCGGATACCTATCGCTCCGCGTGAAG
CCGGGGACCAGCGGGGGCATCGCGCGCTTCTACCGGGAGATCTTCGATTC
AGAAGTGGAAGAGATTGGCGACGGGAGCGGCGGAAGAGATCGAAGTTGCC
CCACAGCAGAAGAGGGGGAAACTGGTGCTGGAACATCTTGGCATGCTAAC
GAGGGAGCAGCAAAAGGGGCGGTTGTGAGAGTGGGACCCGTCCAATACCT
GGCGTTCATGGAGGGAGAGGAGGCTCTACCGGAGGAGTACGACGGCCACC
ACATCTGCGTTTACCTCACAGAAGAAGGTGGAGGGAGCAGCAAAAGGGGC
GGTTGTGAGAGTGGGACCCGTCCAATACCTGGCGTTCATGGAGGGAGAGG
AGGCTCTACCGGAGGAGTACGACGGCCACCACATCTGCGTTTACCTCACA
GAAGAAGGTGGCTTTCGTCGCAGCTTTATTCTAGCCGAGAAGAGGGGGCT
CGTGTTCGTGAATCCGCGCAGGAACTTCGGCAAGGCGGACACCCTCGAGA
AGGCCCTCGAGGAGAAGCAGTTTCGCATCAAGAACATGGCTTTCGTCGCA
GCTTTATTCTAGCCGAGAAGAGGGGGCTCGTGTTCGTGAATCCGCGCAGG
AACTTCGGCAAGGCGGACACCCTCGAGAAGGCCCTCGAGGAGAAGCAGTT
TCGCATCAAGAACATGGTTGATCCGTCGAGCGGGGACCTTCTGCACGTGC
TGGAACACGAGGTTAGAAGCGTGACCCACCCATCCTACCCCGTGGGGAGA
GACCTGTCCGCTGAGTGAGTTGATCCGTCGAGCGGGGACCTTCTGCACGT
GCTGGAACACGAGGTTAGAAGCGTGACCCACCCATCCTACCCCGTGGGGA
GAGACCTGTCCGCTGAGTGA
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