prot_P-fluviatile_contig12.1394.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1394.1
Unique Nameprot_P-fluviatile_contig12.1394.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length668
Homology
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BLAST of mRNA_P-fluviatile_contig12.1394.1 vs. uniprot
Match: A0A6H5L4T9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T9_9PHAE)

HSP 1 Score: 444 bits (1141), Expect = 1.250e-137
Identity = 417/597 (69.85%), Postives = 456/597 (76.38%), Query Frame = 0 
Query:    1 MMLNLGMPLSDVRYAVTGGXXXXXIESRGGDVLLPSGDQGSRALPPLTSPSLLQEGTAATAVKEGEAVXXXXXXXXXXXXVSAEGTPTPGADLTGGEVRPXXXXXXRHPAGNMRGLTPFAPPQSGLPPSLLSSMMGAGGSYEGAESAAAALSGRGGREARVASEFSFLVRTLGAHGRFEEARARVLPEMRRRGIAPADHTYAALLAGAAIARNPDAAEEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRAAATAPQWIRAYGGIVDDLVQRFIGLGITPEIDTYRALLLAYSNGGDADKVLQCIEEAHVLEGHTGDQIGNGTPKLPWKAYCDALDAIARCLSVSRHRGTRARWGILPGEDPLVMDITALEVPEEDFNRVRQMQMSAMEWDEDGETALRKGFKKGKRTKFMGVKTPADLIGDDEFERDIEDEYERIMAKAKAMKELERRENLIQLGIDPDAEDRVAKTRPRVLPDPRDKESIGAPMPHWLSAEANAPLPGL 597
            MMLNLGM LSD  +A+ GG          G+V LP    G        SPS L       A       XXXXXXXXXXXX     +P                   R P+G M   +P AP  +  P SL SSMM  GG     E+   +  G GGR    A EFSFLVRTLGAHGRFEEAR+RV+PEMRRRG+ P +HT+A+LLAGAAI R+P AAE+V  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          IRAYG IVDDLVQRFIGLG+TPE+DTYRALLLAYSNGGDADKVLQCIEE HVLEGHT D +GNGT KLPW+AYCD+LDAIARC SV RHRG  ARWGILPG+D LVMDIT+LEVPEEDF+RVR MQM+AMEWDE+GETAL+KGF+KGKRTKF GV TP DL+GDDE+ER I  +YE +M KAKAMKE+ERRE L+Q GIDPD  D+ AKTRPRVLPD RD+E I AP+PHWLS EA+ PLPGL
Sbjct:  174 MMLNLGMRLSDDDHAIAGGGS--------GEVNLPLSADGR-------SPSPLLHDGEVDATAXXXXXXXXXXXXXXXXXXXXPSSP-----------------WSRQPSG-MYSHSPAAP-TTPYPYSLPSSMMPYGG-----EAGMGSPRGSGGRGGGAAEEFSFLVRTLGAHGRFEEARSRVVPEMRRRGVTPTEHTFASLLAGAAIERDPIAAEQVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRAYGTIVDDLVQRFIGLGVTPEVDTYRALLLAYSNGGDADKVLQCIEELHVLEGHTADNLGNGTAKLPWQAYCDSLDAIARCTSVGRHRGIPARWGILPGQDSLVMDITSLEVPEEDFSRVRGMQMAAMEWDEEGETALKKGFRKGKRTKFRGVTTPDDLVGDDEYERAIASQYEEVMNKAKAMKEVERREALLQRGIDPDEGDKEAKTRPRVLPDLRDRERIEAPVPHWLSGEASDPLPGL 731
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BLAST of mRNA_P-fluviatile_contig12.1394.1 vs. uniprot
Match: D8LDL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL3_ECTSI)

HSP 1 Score: 425 bits (1092), Expect = 8.010e-132
Identity = 368/471 (78.13%), Postives = 401/471 (85.14%), Query Frame = 0 
Query:  120 APPQSGLPPSLLSSMMGAGGSYEGAESAAAALSGRGGREARVA---SEFSFLVRTLGAHGRFEEARARVLPEMRRRGIAPADHTYAALLAGAAIARNPDAAEEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRAAATAPQWIRAYGGIVDDLVQRFIGLGITPEIDTYRALLLAYSNGGDADKVLQCIEEAHVLEGHTGDQIGNGTPKLPWKAYCDALDAIARCLSVSRHRGTRARWGILPGEDPLVMDITALEVPEEDFNRVRQMQMSAMEWDEDGETALRKGFKKGKRTKFMGVKTPADLIGDDEFERDIEDEYERIMAKAKAMKELERRENLIQLGIDPDAEDRVAKTRPRVLPDPRDKESIGAPMPHWLS 587
            APP    P SL SSMM  GG        A   S RG           EFSFLVRTLGAHGRFEEAR+RV+PEMRRRG+ P +HT+A+LLAG AI R+P AAE+V  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          IRAYG IVDDLVQRFIGLG+TPE+DTYRALLLAYSNGGDADKVLQCIEE HVLEGHT D +G+GTP+LPW+AYCD+LDAIARC SV RHRGT ARWGILPG+D LVMDIT+LEVPEEDF+RVR+MQM+AMEWDE+GE AL+KGF+KGKRTKF GV TP DL+GDDE+ER I  +YE++M KAKAMKE+ERRE L+QLGIDPD  D+ AKTRPRVLPDPRD+E I AP+PHWLS
Sbjct:  218 APPTPPYPYSLPSSMMPYGGE-------AGMGSPRGXXXXXXXXXXEEFSFLVRTLGAHGRFEEARSRVIPEMRRRGVTPTEHTFASLLAGTAIERDPIAAEQVWSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRAYGTIVDDLVQRFIGLGVTPEVDTYRALLLAYSNGGDADKVLQCIEEVHVLEGHTADNLGDGTPRLPWQAYCDSLDAIARCTSVGRHRGTPARWGILPGQDSLVMDITSLEVPEEDFSRVREMQMAAMEWDEEGEAALKKGFRKGKRTKFRGVTTPDDLVGDDEYERAIASQYEQVMDKAKAMKEVERREALLQLGIDPDEGDKEAKTRPRVLPDPRDRERIEAPVPHWLS 681
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4T9_9PHAE1.250e-13769.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDL3_ECTSI8.010e-13278.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 522..545
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 241..404
coord: 162..263
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 305..337
e-value: 2.4E-6
score: 25.4
coord: 270..303
e-value: 1.5E-6
score: 26.0
coord: 199..232
e-value: 1.5E-5
score: 22.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 184..232
e-value: 3.1E-6
score: 27.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 268..311
e-value: 3.1E-10
score: 40.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 236..263
e-value: 0.031
score: 14.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 377..407
score: 5.875
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 232..266
score: 8.473
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 267..301
score: 10.413
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 161..196
score: 8.265
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 302..336
score: 10.643
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 197..231
score: 10.095
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 239..419
e-value: 3.5E-30
score: 107.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 161..227
e-value: 1.1E-6
score: 30.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:1085320..1097277 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1394.1mRNA_P-fluviatile_contig12.1394.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 1085320..1098790 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1394.1 ID=prot_P-fluviatile_contig12.1394.1|Name=mRNA_P-fluviatile_contig12.1394.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=668bp
MMLNLGMPLSDVRYAVTGGGGGGGIESRGGDVLLPSGDQGSRALPPLTSP
SLLQEGTAATAVKEGEAVAAAAEEAAAAAAVSAEGTPTPGADLTGGEVRP
PPPPPPRHPAGNMRGLTPFAPPQSGLPPSLLSSMMGAGGSYEGAESAAAA
LSGRGGREARVASEFSFLVRTLGAHGRFEEARARVLPEMRRRGIAPADHT
YAALLAGAAIARNPDAAEEVWREMLEGGVRPSAHAWGARVDAHARGGRMR
QALRLGKEMRDEGHPWGVETYTSLIAGSVRRRDYSGAWRLWKEMIIWGVQ
PDAMAYNTMIKLCAQTRQYEKAMTFLDEMDMFDHRPSRITMELLFRAAAT
APQWIRAYGGIVDDLVQRFIGLGITPEIDTYRALLLAYSNGGDADKVLQC
IEEAHVLEGHTGDQIGNGTPKLPWKAYCDALDAIARCLSVSRHRGTRARW
GILPGEDPLVMDITALEVPEEDFNRVRQMQMSAMEWDEDGETALRKGFKK
GKRTKFMGVKTPADLIGDDEFERDIEDEYERIMAKAKAMKELERRENLIQ
LGIDPDAEDRVAKTRPRVLPDPRDKESIGAPMPHWLSAEANAPLPGLLPT
EGSSEQQLGISDGSGETGVGAPRGSDTGGAGQELGADGGGEHGAVRSREI
GPLSWRGISEAGQKPPDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf