mRNA_P-fluviatile_contig8.14406.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14406.1
Unique NamemRNA_P-fluviatile_contig8.14406.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig8.14406.1 vs. uniprot
Match: D7G2K6_ECTSI (P4Hc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K6_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 1.300e-125
Identity = 184/207 (88.89%), Postives = 190/207 (91.79%), Query Frame = 1 
Query: 1081 LYPGLRRLWEAMPAPLYAVDDFFTRPECDALMALASNYMIASPVVGPGAGEVSESRTSSSCFLAREDLPTVCRKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLTTEDGRRFAQNGGQRVCTVLVYLNDVATGGCTAFPQLGLKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARIPQI 1701
            LYPGLR L E    PLY VDDFF+ PECDAL+ALA NYMI SPVVG GAGEVSESRTSSSCFLAREDLPTVC KVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDL TEDGRRFAQNGGQRVCTVLVYLNDV +GGCTAFPQLG+KVQP+KGMAVVFFPATLDGVLDSRLLHAAEPA+DTKWVSQIWIRQG Y GTPTARIP I
Sbjct:   90 LYPGLRNLRET--PPLYVVDDFFSGPECDALIALAGNYMIVSPVVGAGAGEVSESRTSSSCFLAREDLPTVCHKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLNTEDGRRFAQNGGQRVCTVLVYLNDVPSGGCTAFPQLGMKVQPRKGMAVVFFPATLDGVLDSRLLHAAEPAIDTKWVSQIWIRQGAYHGTPTARIPAI 294
[Close]
BLAST of mRNA_P-fluviatile_contig8.14406.1 vs. uniprot
Match: A0A8J2S9J3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9J3_9STRA)

HSP 1 Score: 278 bits (710), Expect = 1.310e-86
Identity = 136/217 (62.67%), Postives = 162/217 (74.65%), Query Frame = 1 
Query: 1051 PEQSFLQLNPLYPGLRRLWEAMPAPLYAVDDFFTRPECDALMALASNYMIASPVVGPGAGEVSESRTSSSCFLAREDLPTVCRKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLTTEDGRRFAQNGGQRVCTVLVYLNDVATGGCTAFPQLGLKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARIPQI 1701
            P + +L LNP YPGL  +      P++ V  F +  ECD L+  A  +M  +PVVG G GEVS SRTSS+C+LAREDLPT+C KV ALTG P+EHLELPQVGRY   + Y  H+DAFD ++ DGRRFAQNGGQRV TVLVYLNDVA GGCT+F +LGL +QPKKG A+VFFPA+LDG+LD   LHAAEPA+D KWVSQIWIRQ  Y+G  + RI  I
Sbjct:   27 PPRQYLPLNPAYPGLTAVHT--DPPVFTVAIFLSEAECDDLINSAQGHMTPAPVVGAGNGEVSVSRTSSTCYLAREDLPTICTKVCALTGCPVEHLELPQVGRYRGGEFYKAHYDAFDTSSPDGRRFAQNGGQRVATVLVYLNDVARGGCTSFSKLGLSIQPKKGTALVFFPASLDGMLDQHYLHAAEPALDLKWVSQIWIRQKAYNGLASVRIAPI 241
[Close]
BLAST of mRNA_P-fluviatile_contig8.14406.1 vs. uniprot
Match: A0A7S1UYE3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UYE3_9STRA)

HSP 1 Score: 282 bits (721), Expect = 5.670e-86
Identity = 154/279 (55.20%), Postives = 189/279 (67.74%), Query Frame = 1 
Query:  862 HKLEGPAIVPGYSTMAPQQLQVAAPVYTTPLPPQQQHMIAAMQKPGMTASALVPEAGAASAPFPEQSFLQLNPLYPGLRRLWEAMPAPLYAVDDFFTRPECDALMALASNYMIASPVVGPGAGEVSESRTSSSCFLAREDLPTVCRKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLTTEDGRRFAQNGGQRVCTVLVYLNDVATGGCTAFPQLGLKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARIPQ 1698
            H+L  P     ++  A Q   ++A + TT +P      +A    P  +A+AL  +      P     +  +NP YPGLR L  A P P++AVD+F +  EC  LM +A +    +PVVG GAGEVS SRTSS+C+LAREDLP   RKV  LTGKPIEH ELPQVGRY+ SQ+Y  H+DAFDL+ EDGRRFA NGGQR  TVLVYLNDV  GG T+FP L L VQP++GMA+VFFPAT+DG LD   LHAA PAVDTK+VSQ+WIRQG Y G P+ R+PQ
Sbjct:  120 HQLVSPVSAAAFAVSA-QTAALSAALNTTAMP-----TMAIQGPPPESATALTVQ----ERPLIPPVYNGVNPHYPGLRLL-NATP-PIFAVDNFLSPFECQFLMEVAQDSFGPAPVVGKGAGEVSPSRTSSTCYLAREDLPDYLRKVSLLTGKPIEHCELPQVGRYFPSQQYLQHFDAFDLSNEDGRRFASNGGQRTVTVLVYLNDVHQGGATSFPALNLDVQPRRGMAIVFFPATVDGYLDKMALHAANPAVDTKYVSQVWIRQGEYKGQPSKRLPQ 386
[Close]
BLAST of mRNA_P-fluviatile_contig8.14406.1 vs. uniprot
Match: A0A1Z5JHE4_FISSO (P4Hc domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHE4_FISSO)

HSP 1 Score: 265 bits (677), Expect = 1.850e-81
Identity = 129/209 (61.72%), Postives = 160/209 (76.56%), Query Frame = 1 
Query: 1072 LNPLYPGLRRLWEAMPAPLYAVDDFFTRPECDALMALASNYMIASPVVGPGAGEVSESRTSSSCFLAREDLPTVCRKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLTTEDGRRFAQNGGQRVCTVLVYLNDVATGGCTAFPQLGLKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARIPQ 1698
            +NP YPGLR L  +   P++AV++F T  ECD L+  A + +  +PVVG GAGE+S SRTSS+C+LAREDL  + RKV  LTGKP EH ELPQVGRY+  +KY  H+DAFDL+TEDGRRFA NGGQR  TVL+YLNDV  GG T FP L L +QP++GMA+VFFPAT+DG+LD   LHAA PA+DTK+VSQ+WIRQ  Y+G P+ R+ Q
Sbjct:    9 VNPSYPGLRVLNNS--PPIFAVENFLTPYECDFLIHAAVDALGPAPVVGKGAGEISPSRTSSTCYLAREDLGDLMRKVSLLTGKPPEHCELPQVGRYFYQEKYLQHFDAFDLSTEDGRRFAANGGQRTVTVLIYLNDVMRGGATRFPALNLDIQPRRGMALVFFPATVDGMLDKMALHAALPAIDTKFVSQVWIRQSIYNGQPSKRLQQ 215
[Close]
BLAST of mRNA_P-fluviatile_contig8.14406.1 vs. uniprot
Match: A0A835YJM0_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJM0_9STRA)

HSP 1 Score: 263 bits (673), Expect = 1.990e-81
Identity = 124/190 (65.26%), Postives = 146/190 (76.84%), Query Frame = 1 
Query: 1123 PLYAVDDFFTRPECDALMALASNYMIASPVVGPGAGEVSESRTSSSCFLAREDLPTVCRKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLTTEDGRRFAQNGGQRVCTVLVYLNDVATGGCTAFPQLGLKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARI 1692
            P Y V+ F +  EC+ L+  A  +M  SPVVG G GE+S SRTS+SC+ AREDLP++C KV  LTGKP +HLELPQVGRY  +Q YA H DAFDL T+DG RFAQNGGQRV TVL+YLNDV  GG T+FP+LGL V P++GMAVVFFP+TLDG  D   LH AEPAVD K+VSQIWIRQG Y+G PT R+
Sbjct:   25 PFYVVEGFLSTQECEGLIRQADGFMCTSPVVGKGNGEISPSRTSTSCYFAREDLPSICHKVCMLTGKPADHLELPQVGRYLPTQFYAPHLDAFDLKTQDGMRFAQNGGQRVATVLIYLNDVPRGGNTSFPRLGLSVTPRRGMAVVFFPSTLDGCADELALHTAEPAVDVKYVSQIWIRQGLYTGEPTRRL 214
[Close]
BLAST of mRNA_P-fluviatile_contig8.14406.1 vs. uniprot
Match: F0Y4P1_AURAN (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4P1_AURAN)

HSP 1 Score: 262 bits (669), Expect = 2.330e-81
Identity = 124/179 (69.27%), Postives = 147/179 (82.12%), Query Frame = 1 
Query: 1123 PLYAVDDFFTRPECDALMALASNYMIASPVVGPGAGEVSESRTSSSCFLAREDLPTVCRKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLTTEDGRRFAQNGGQRVCTVLVYLNDVATGGCTAFPQLGLKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQ 1659
            P+Y V +F T  ECDAL+  A ++M  +PVVGPG GEVS SRTSS+C+LAREDLP+VC KV ALTGKP+EHLELPQVGRY   + Y  H+DAFD ++ DGRRFAQNGGQRV TVLVYLNDV  GG T+F +LG++++P+KG A++FFPATLDGVLD   LHAAEPAVD KWVSQIWIRQ
Sbjct:    2 PIYTVQNFLTEEECDALIDSAKDHMTPAPVVGPGNGEVSVSRTSSTCYLAREDLPSVCTKVCALTGKPLEHLELPQVGRYRGGEFYKPHYDAFDTSSADGRRFAQNGGQRVATVLVYLNDVERGGETSFSKLGVRIKPRKGNALIFFPATLDGVLDQNYLHAAEPAVDPKWVSQIWIRQ 180
[Close]
BLAST of mRNA_P-fluviatile_contig8.14406.1 vs. uniprot
Match: A0A7S3KY14_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KY14_9STRA)

HSP 1 Score: 270 bits (690), Expect = 5.210e-81
Identity = 130/208 (62.50%), Postives = 160/208 (76.92%), Query Frame = 1 
Query: 1072 LNPLYPGLRRLWEAMPAPLYAVDDFFTRPECDALMALASNYMIASPVVGPGAGEVSESRTSSSCFLAREDLPTVCRKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLTTEDGRRFAQNGGQRVCTVLVYLNDVATGGCTAFPQLGLKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARIP 1695
            +NP YPGLR L  +   P++ V++F +  ECD L+  A +    +PVVG G+GE+S SRTSS+C+LAREDLP + RKV  LTGKPI+H ELPQVGRY  SQ+Y  H+DAFDL+TEDGRRFA NGGQR  TVL+YLNDV  GG T FP L L VQP +GMA++FFPAT+DG+LD   LHAA PAVDTK+VSQ+WIRQG Y+G P+ R+P
Sbjct:  190 VNPHYPGLRVLHNS--PPVFCVENFLSPHECDFLINAAHDSFGPAPVVGKGSGEISPSRTSSTCYLAREDLPDLMRKVTLLTGKPIDHCELPQVGRYMASQQYLQHYDAFDLSTEDGRRFASNGGQRTITVLIYLNDVHQGGATRFPALNLDVQPVRGMALIFFPATIDGMLDQMSLHAALPAVDTKYVSQVWIRQGSYNGQPSKRLP 395
[Close]
BLAST of mRNA_P-fluviatile_contig8.14406.1 vs. uniprot
Match: A0A7S4N7N8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N7N8_9STRA)

HSP 1 Score: 261 bits (667), Expect = 2.490e-80
Identity = 132/210 (62.86%), Postives = 156/210 (74.29%), Query Frame = 1 
Query: 1063 FLQLNPLYPGLRRLWEAMPAPLYAVDDFFTRPECDALMALASNYMIASPVVGPGAGEVSESRTSSSCFLAREDLPTVCRKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLTTEDGRRFAQNGGQRVCTVLVYLNDVATGGCTAFPQLGLKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARI 1692
            F  +NP  PGLR L  +   P++AVDDF +  ECD L+  AS+ +  +PVVG G GEVS++RTSS+CFLAREDLP    KV ALTGKP  H ELPQVGRY  SQ Y  H+DAFDL T+DGRR A  GGQR  TVLVYLNDV  GG TAFP+L L V+PK+G AVVFFPAT+DG LD R+LHAA PAVD K+VSQ+WIRQG + G P+ R+
Sbjct:    1 FNGVNPDSPGLRVL--SSDPPVFAVDDFLSPAECDFLIHAASDALQTAPVVGRGGGEVSQARTSSTCFLAREDLPEYVAKVSALTGKPPGHCELPQVGRYLQSQHYQQHYDAFDLGTDDGRRVASKGGQRTVTVLVYLNDVENGGETAFPELKLAVKPKRGKAVVFFPATVDGYLDQRVLHAATPAVDVKYVSQVWIRQGAHDGVPSKRL 208
[Close]
BLAST of mRNA_P-fluviatile_contig8.14406.1 vs. uniprot
Match: A0A6U3RVV9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RVV9_9STRA)

HSP 1 Score: 268 bits (685), Expect = 2.700e-80
Identity = 132/210 (62.86%), Postives = 160/210 (76.19%), Query Frame = 1 
Query: 1063 FLQLNPLYPGLRRLWEAMPAPLYAVDDFFTRPECDALMALASNYMIASPVVGPGAGEVSESRTSSSCFLAREDLPTVCRKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLTTEDGRRFAQNGGQRVCTVLVYLNDVATGGCTAFPQLGLKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARI 1692
            F  +NP YPG+R +  +   P++ VD+F T  EC  L+  A++    +PVVG GAGE+S+SRTSS+C+LAREDLP    KV ALTGKP+EH ELPQVGRY  SQ+Y  H+DAFDL+ EDGRRFA NGGQR  TVLVYLNDV+ GG TAFP L ++VQPK+GMA+VFFPAT+DG LD   LHAA PAVD K+VSQ+WIRQG Y G P+ RI
Sbjct:  181 FNGVNPNYPGVRMIHSS--PPIFTVDNFLTTEECHFLIHSATDSFGPAPVVGKGAGELSKSRTSSTCYLAREDLPEYMMKVTALTGKPMEHCELPQVGRYLPSQQYLQHFDAFDLSNEDGRRFASNGGQRTVTVLVYLNDVSRGGQTAFPSLNIEVQPKQGMALVFFPATVDGYLDKMALHAALPAVDPKYVSQVWIRQGNYEGQPSKRI 388
[Close]
BLAST of mRNA_P-fluviatile_contig8.14406.1 vs. uniprot
Match: A0A7S2UA87_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA87_9STRA)

HSP 1 Score: 263 bits (672), Expect = 3.010e-80
Identity = 127/207 (61.35%), Postives = 156/207 (75.36%), Query Frame = 1 
Query: 1072 LNPLYPGLRRLWEAMPAPLYAVDDFFTRPECDALMALASNYMIASPVVGPGAGEVSESRTSSSCFLAREDLPTVCRKVMALTGKPIEHLELPQVGRYYTSQKYANHWDAFDLTTEDGRRFAQNGGQRVCTVLVYLNDVATGGCTAFPQLGLKVQPKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPTARI 1692
            +NP YPGL  L  + P P++ VD+F +  ECD L+A + +    +PVVG G GEVSE+RTSS+C+LAREDLP    K+MALTGKP+EH ELPQ+GRY  SQKY  H+DAFDL  E GRRFA NGGQR  TVL+YLNDV  GG T FP L L+V+P++GMA+VFFPAT+DG LD   LHAA PA+DTK+VSQ+WIRQG Y G P+  +
Sbjct:   55 VNPSYPGLHVL-NSSP-PVFCVDNFLSPEECDFLIASSLDSFAPAPVVGKGGGEVSETRTSSTCYLAREDLPLYMNKIMALTGKPLEHCELPQIGRYLPSQKYLQHFDAFDLGDEHGRRFASNGGQRTVTVLLYLNDVMNGGHTTFPSLNLEVKPRRGMAIVFFPATIDGYLDKMALHAALPAIDTKFVSQVWIRQGNYEGQPSKHL 259
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2K6_ECTSI1.300e-12588.89P4Hc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A8J2S9J3_9STRA1.310e-8662.67Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1UYE3_9STRA5.670e-8655.20Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A1Z5JHE4_FISSO1.850e-8161.72P4Hc domain-containing protein n=2 Tax=Fistulifera... [more]
A0A835YJM0_9STRA1.990e-8165.26Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
F0Y4P1_AURAN2.330e-8169.27Fe2OG dioxygenase domain-containing protein (Fragm... [more]
A0A7S3KY14_9STRA5.210e-8162.50Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S4N7N8_9STRA2.490e-8062.86Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6U3RVV9_9STRA2.700e-8062.86Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2UA87_9STRA3.010e-8061.35Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1157356..1161453 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score382.9
Seed ortholog evalue2.6e-103
Seed eggNOG ortholog2880.D7G2K6
KEGG rclassRC00478
KEGG koko:K00472
KEGG ReactionR01252
KEGG Pathwayko00330,ko01100,map00330,map01100
EggNOG free text desc.procollagen-proline 4-dioxygenase activity
EggNOG OGsKOG1591@1,KOG1591@2759
EC1.14.11.2
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionProlyl 4-hydroxylase, alpha subunit
Ec32 orthologEc-11_002580.1
Exons5
Model size1745
Cds size1671
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817230.2593427-UTR-P-fluviatile_contig8:1157355..11573881622817230.2593427-UTR-P-fluviatile_contig8:1157355..1157388Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1157356..1157388 +
1693571583.8069124-UTR-P-fluviatile_contig8:1157355..11573881693571583.8069124-UTR-P-fluviatile_contig8:1157355..1157388Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1157356..1157388 +
1622817230.3253345-UTR-P-fluviatile_contig8:1161412..11614531622817230.3253345-UTR-P-fluviatile_contig8:1161412..1161453Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1161413..1161453 +
1693571584.0887926-UTR-P-fluviatile_contig8:1161412..11614531693571584.0887926-UTR-P-fluviatile_contig8:1161412..1161453Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1161413..1161453 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817230.270387-CDS-P-fluviatile_contig8:1157388..11578261622817230.270387-CDS-P-fluviatile_contig8:1157388..1157826Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1157389..1157826 +
1693571583.8243556-CDS-P-fluviatile_contig8:1157388..11578261693571583.8243556-CDS-P-fluviatile_contig8:1157388..1157826Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1157389..1157826 +
1622817230.2798414-CDS-P-fluviatile_contig8:1158511..11591201622817230.2798414-CDS-P-fluviatile_contig8:1158511..1159120Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1158512..1159120 +
1693571583.8349495-CDS-P-fluviatile_contig8:1158511..11591201693571583.8349495-CDS-P-fluviatile_contig8:1158511..1159120Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1158512..1159120 +
1622817230.28912-CDS-P-fluviatile_contig8:1159712..11599821622817230.28912-CDS-P-fluviatile_contig8:1159712..1159982Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1159713..1159982 +
1693571583.84601-CDS-P-fluviatile_contig8:1159712..11599821693571583.84601-CDS-P-fluviatile_contig8:1159712..1159982Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1159713..1159982 +
1622817230.2985156-CDS-P-fluviatile_contig8:1160747..11609401622817230.2985156-CDS-P-fluviatile_contig8:1160747..1160940Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1160748..1160940 +
1693571583.8566515-CDS-P-fluviatile_contig8:1160747..11609401693571583.8566515-CDS-P-fluviatile_contig8:1160747..1160940Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1160748..1160940 +
1622817230.310451-CDS-P-fluviatile_contig8:1161251..11614121622817230.310451-CDS-P-fluviatile_contig8:1161251..1161412Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1161252..1161412 +
1693571584.0701728-CDS-P-fluviatile_contig8:1161251..11614121693571584.0701728-CDS-P-fluviatile_contig8:1161251..1161412Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1161252..1161412 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14406.1prot_P-fluviatile_contig8.14406.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 1157389..1161412 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14406.1

>prot_P-fluviatile_contig8.14406.1 ID=prot_P-fluviatile_contig8.14406.1|Name=mRNA_P-fluviatile_contig8.14406.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=557bp
MVSVVRPCPRRHALLSVLLSSIYRGQTWFTRWSGAAIMSSGDGRKTSAAF
GQAEFDSGSYAPSGGAFGSTSQTPTGALFSDTQAAPHLTPGGANCGVETS
TATPMLLQSTPPRPLFLPAAPRVLDAAASDASRMLFAPRSDQQQHQSATG
ANPTRPPQLQQQQQQWFGGIGAPQQAAGGAINGNVAAIRGTSTENMIPIK
SGVNAGGPEAFVGADGAGGLAAFLPPQQQHHPQPFSHAAGTGVPQPPVTV
TGLAGFTFNGGGGDGGGSSNGGGGAAHKLEGPAIVPGYSTMAPQQLQVAA
PVYTTPLPPQQQHMIAAMQKPGMTASALVPEAGAASAPFPEQSFLQLNPL
YPGLRRLWEAMPAPLYAVDDFFTRPECDALMALASNYMIASPVVGPGAGE
VSESRTSSSCFLAREDLPTVCRKVMALTGKPIEHLELPQVGRYYTSQKYA
NHWDAFDLTTEDGRRFAQNGGQRVCTVLVYLNDVATGGCTAFPQLGLKVQ
PKKGMAVVFFPATLDGVLDSRLLHAAEPAVDTKWVSQIWIRQGPYSGTPT
ARIPQI*
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mRNA from alignment at P-fluviatile_contig8:1157356..1161453+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14406.1 ID=mRNA_P-fluviatile_contig8.14406.1|Name=mRNA_P-fluviatile_contig8.14406.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4098bp|location=Sequence derived from alignment at P-fluviatile_contig8:1157356..1161453+ (Porterinema fluviatile SAG_2381)
GCCGAAAGTGTAGCCCTCCTCCTTCTTGTCTGAATGGTCTCCGTCGTCCG
CCCCTGTCCACGAAGACACGCATTGCTTTCGGTCCTCCTCTCCTCCATCT
ATCGTGGTCAAACCTGGTTCACTCGGTGGTCGGGGGCGGCGATCATGAGC
AGCGGCGACGGCAGGAAGACATCCGCCGCTTTTGGGCAAGCAGAATTTGA
CTCAGGGAGCTATGCCCCGTCCGGCGGGGCGTTTGGCAGCACATCGCAGA
CGCCGACAGGGGCGTTGTTCAGCGATACTCAGGCGGCGCCGCACCTCACA
CCAGGCGGAGCTAATTGCGGTGTCGAGACATCAACCGCGACGCCCATGTT
ACTTCAAAGCACCCCACCCCGCCCTCTGTTTCTGCCCGCTGCTCCCAGAG
TGTTGGATGCGGCTGCCTCAGATGCCTCGCGCATGTTGTTCGCTCCGAGG
TCGGACCAGCAGCAACACCAGGTTAGTTAGAGAGTCAGTGGGCTCACGCA
CACGGCATCCACCGCCTGCTCACTGCTATTTATGGCCACACGCCGGCCTT
TGGAGGGAGCACATCAGACGAGAGCGTACCAATAATCGGATTTCCACTTT
GATTTCGCCACGATGCGCCCTCCTCGATTGTCGCTGATGTAATTCCGATT
TCGTGCTCGCAAGGTTTGACTCTCTCTGGAGAGAGAGCAAGTGGAGCATG
TGTTCTTTGTTTCGCCGCTTTCAACACACAGTTTGCAGCAAAACACCCGA
CTCGCACACCCGTCGCCCCAAAAACATGAAGGTGTCTGTTGAAGCTTTGA
CATTCGCCTCCAACACGGCCACACAGCCTCGTTTCTTATGACATGCACCG
TGGCGGCCAACGAACTTGTCGTCGCCTGGCCGCGCCCGCAGACGTTTACC
ACAGCGACCGTTCGGAACATCCATAACAAACATCGACATTATCACCTGTT
TTAGTCTACATGAAAAATTGCCGCCGACATCACCGTGACACTAGCTTTTT
GAGCGCAAGTACACGGGTCAACACAGCAAGACAACGACGCCAGCGTGTTT
GCTTTGCGTACGCTCCACCTGAAAACCCCGCCCCTTGCCGTCCCTGGCCT
TGAACCCTTAACTGGCGAATCACGGGTTTCTTTTTGGCTTTTGGCTTTTG
TCCCAGAGCGCGACGGGAGCCAACCCGACCCGGCCCCCTCAGCTACAGCA
ACAGCAGCAGCAATGGTTCGGAGGGATCGGGGCACCTCAACAGGCTGCCG
GCGGGGCAATCAACGGGAACGTTGCCGCCATCCGCGGCACTTCCACCGAG
AACATGATCCCTATTAAAAGCGGTGTCAACGCTGGGGGGCCGGAAGCTTT
TGTCGGGGCAGACGGGGCAGGGGGATTAGCAGCCTTCTTACCGCCGCAAC
AACAGCATCACCCTCAACCATTCAGCCACGCAGCAGGTACCGGGGTTCCA
CAACCCCCCGTCACGGTAACGGGCCTTGCGGGGTTCACCTTCAACGGCGG
TGGCGGTGACGGCGGCGGCAGCAGCAACGGTGGTGGTGGTGCCGCCCACA
AGCTGGAGGGGCCCGCAATTGTGCCCGGCTACAGCACGATGGCGCCCCAG
CAGCTTCAGGTTGCCGCGCCGGTATACACCACTCCGCTACCACCGCAGCA
GCAGCACATGATAGCAGCGATGCAGAAGCCAGGAATGACGGCGTCGGCGT
TGGTACCAGAAGCGGGTGCCGCGAGCGCACCTTTTCCCGAGCAATCGTTC
CTTCAACTCAATCCAGTGAGACGCAGGGGGGGGGCAGCAGGGGTGAAGGT
GGAGAATGGTTACGTTTTTTTTCACAGTATCGCCGCGAGAATCCAAAGCT
ACGCCGCCGCTCATGTTCTATCCGTCGCCACAAGCGGCGGGGATGGGCGG
GGGGGAGCACGGGCAACGAATATCTCGGACTTCACTCGCGTAACTCAAGT
TCGTCGCGGTAATCGGCGAGTTCTTCTGTAAGAGCGTGTCCCAATAGTCG
TACATCCCAATCGTGCCGAAGCCCACGCCTTCACAACTTGTTCCCGCCCG
CCTTACCCCCCCCCTACCCCGTCCCCCAACCCCATGCCCCCCTCCCTTCC
TCTAACTTTCTACTCTCCATGCTGTCCCCATGGGTGGTTGATTTTTTGTG
CTGCGCTTGGGACGAATGAGCAACAGATTGAGAAACAAAGACATTAGGGT
ACACGATCAGTTTCTCATCATCAGGACTCGACATGTAGCCAACACCTCGG
GACATACACCCGCACCCACCCACACACGCACAACACTCCCGCGGGCACCC
GAAACAGAATAGTCGCAACGAACGCAAAAGTGACAAGCCAAACATATGTT
TTCGCAGCTCTACCCGGGGCTCCGCAGGCTGTGGGAGGCAATGCCCGCCC
CTCTGTACGCGGTGGACGACTTCTTCACCAGGCCGGAGTGCGACGCCCTC
ATGGCCCTCGCGTCCAACTACATGATCGCAAGCCCCGTGGTTGGCCCCGG
CGCAGGCGAGGTCAGCGAGAGCCGCACCAGCAGCTCATGCTTTCTGGCGA
GGGAGGACCTCCCGACGGTGTGCCGGAAGGTCATGGCTCTCACGGGGAAA
CCCATCGAGCACCTGGAGCTCCCGCAGGTGGGCAGAGCAGCGTTATAGAA
GCGGGAAGGCAAGCTGGGCCATGGGAGCGTCAGAACTTTTGTGTTTGATG
GTGTGGTCAACGTGTGCGTCTATGCCCCGTGTAGTGGGTGTGTGTTAAAT
CAGTTTTCTACGCCGCGCCGACTGGCTTTTACTGAAAGCCTTGCTTCGTT
TCATTCTGTAGGCGGCGCAACGCGGGGCGAGCGGGCCGCCATTTCGAATC
CCCCCCCCCCAGGAATTTTGATGCGGAAACGCCGATGTGTGGACCCGGCG
TCGTGCGTTTTAGGACGCCTGGGTCGCTCCAGGTGTGTGCGAATGGACAG
CGGCCTCAGGAACTGACAGCAGATGATAGCCGACTTGTGTGTGATGAGCT
TCCGGGTTAGGCCTGCTCCATAAGCCAGCAGCAGACAGAGGACGGAAGAG
GTGGTGCTGGCCTCGTCCCGAGCACGTGTGCGGAGAATCGCACGCACGCC
ACGCAAGAATGCGTGCGTGTGCTTGCGGATCACCCCTGAAGCATGCATAT
GTTTCTTTCTTCTCCTGCTCCCCCCCCCCGCGCTTACTATCGGGCGACCT
GCGAAGTGCTGCTCCCCCGGCTGGTTTGTTGTGAGCGAGCACCCTCCCTA
CCGGTGGAAGCATTCTTTGATCCTTTGAAGGTGTAAGTTCTTGTTTTCCC
GCGTACTTTCTGATTCATTTTTGTTTGTTTTTTACTATCATATTTCGCCC
GCACTTTCCCTTGTGACTTGTGTGGCCTCCATTCAAATCAAGGTCGGGCG
GTACTACACCTCCCAGAAATACGCTAACCACTGGGACGCGTTCGACCTGA
CCACCGAGGACGGCCGGAGGTTCGCGCAGAACGGCGGGCAGCGCGTGTGC
ACGGTGCTGGTGTACCTCAACGACGTGGCGACCGGCGGCTGCACTGCCTT
CCCACAGCTGGGCCTCAAGGTGCAGCCGAAGAAAGGTGAGAGCGGCGTGT
TTTGTGTTGTTTTGGTGGTGGTGGTGATGGTTGTTGTTGATTGTTACCTT
CGCGCCTGTCCAGCCGCTTATTTACACAATCCAGAGTCTGTCGTTTGTGG
GAGAGGATTGCGTTCCCCTATTTTCGGCATCGCAACACACCTGCCCGCAC
CCACACGGTCACCCTGACCCATGCGCCCACACCTTTGTATGCAGCGCACG
AGCGCGCGCGAAGCAAGGTTGGATGCTAGCCGAAAATAAACTCCGCCTCG
TTGTCTTTCCATGTGCTTCATTTTTCCTTGCTGACGGACGCAAAAGGCAT
GGCGGTCGTCTTCTTCCCGGCGACGCTGGACGGGGTCCTAGACTCGAGGC
TGCTCCACGCCGCCGAGCCGGCCGTGGACACCAAGTGGGTCTCCCAGATC
TGGATCCGGCAGGGCCCCTACAGCGGCACGCCCACCGCCAGGATACCTCA
GATCTGATGAAAAGAAAGACGGGGGGATGGGGGGTTGTGATTTTTGCG
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:1157356..1161453+

>mRNA_P-fluviatile_contig8.14406.1 ID=mRNA_P-fluviatile_contig8.14406.1|Name=mRNA_P-fluviatile_contig8.14406.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3342bp|location=Sequence derived from alignment at P-fluviatile_contig8:1157356..1161453+ (Porterinema fluviatile SAG_2381)
ATGGTCTCCGTCGTCCGCCCCTGTCCACGAAGACACGCATTGCTTTCGGT
CCTCCTCTCCTCCATCTATCGTGGTCAAACCTGGTTCACTCGGTGGTCGG
GGGCGGCGATCATGAGCAGCGGCGACGGCAGGAAGACATCCGCCGCTTTT
GGGCAAGCAGAATTTGACTCAGGGAGCTATGCCCCGTCCGGCGGGGCGTT
TGGCAGCACATCGCAGACGCCGACAGGGGCGTTGTTCAGCGATACTCAGG
CGGCGCCGCACCTCACACCAGGCGGAGCTAATTGCGGTGTCGAGACATCA
ACCGCGACGCCCATGTTACTTCAAAGCACCCCACCCCGCCCTCTGTTTCT
GCCCGCTGCTCCCAGAGTGTTGGATGCGGCTGCCTCAGATGCCTCGCGCA
TGTTGTTCGCTCCGAGGTCGGACCAGCAGCAACACCAGATGGTCTCCGTC
GTCCGCCCCTGTCCACGAAGACACGCATTGCTTTCGGTCCTCCTCTCCTC
CATCTATCGTGGTCAAACCTGGTTCACTCGGTGGTCGGGGGCGGCGATCA
TGAGCAGCGGCGACGGCAGGAAGACATCCGCCGCTTTTGGGCAAGCAGAA
TTTGACTCAGGGAGCTATGCCCCGTCCGGCGGGGCGTTTGGCAGCACATC
GCAGACGCCGACAGGGGCGTTGTTCAGCGATACTCAGGCGGCGCCGCACC
TCACACCAGGCGGAGCTAATTGCGGTGTCGAGACATCAACCGCGACGCCC
ATGTTACTTCAAAGCACCCCACCCCGCCCTCTGTTTCTGCCCGCTGCTCC
CAGAGTGTTGGATGCGGCTGCCTCAGATGCCTCGCGCATGTTGTTCGCTC
CGAGGTCGGACCAGCAGCAACACCAGAGCGCGACGGGAGCCAACCCGACC
CGGCCCCCTCAGCTACAGCAACAGCAGCAGCAATGGTTCGGAGGGATCGG
GGCACCTCAACAGGCTGCCGGCGGGGCAATCAACGGGAACGTTGCCGCCA
TCCGCGGCACTTCCACCGAGAACATGATCCCTATTAAAAGCGGTGTCAAC
GCTGGGGGGCCGGAAGCTTTTGTCGGGGCAGACGGGGCAGGGGGATTAGC
AGCCTTCTTACCGCCGCAACAACAGCATCACCCTCAACCATTCAGCCACG
CAGCAGGTACCGGGGTTCCACAACCCCCCGTCACGGTAACGGGCCTTGCG
GGGTTCACCTTCAACGGCGGTGGCGGTGACGGCGGCGGCAGCAGCAACGG
TGGTGGTGGTGCCGCCCACAAGCTGGAGGGGCCCGCAATTGTGCCCGGCT
ACAGCACGATGGCGCCCCAGCAGCTTCAGGTTGCCGCGCCGGTATACACC
ACTCCGCTACCACCGCAGCAGCAGCACATGATAGCAGCGATGCAGAAGCC
AGGAATGACGGCGTCGGCGTTGGTACCAGAAGCGGGTGCCGCGAGCGCAC
CTTTTCCCGAGCAATCGTTCCTTCAACTCAATCCAAGCGCGACGGGAGCC
AACCCGACCCGGCCCCCTCAGCTACAGCAACAGCAGCAGCAATGGTTCGG
AGGGATCGGGGCACCTCAACAGGCTGCCGGCGGGGCAATCAACGGGAACG
TTGCCGCCATCCGCGGCACTTCCACCGAGAACATGATCCCTATTAAAAGC
GGTGTCAACGCTGGGGGGCCGGAAGCTTTTGTCGGGGCAGACGGGGCAGG
GGGATTAGCAGCCTTCTTACCGCCGCAACAACAGCATCACCCTCAACCAT
TCAGCCACGCAGCAGGTACCGGGGTTCCACAACCCCCCGTCACGGTAACG
GGCCTTGCGGGGTTCACCTTCAACGGCGGTGGCGGTGACGGCGGCGGCAG
CAGCAACGGTGGTGGTGGTGCCGCCCACAAGCTGGAGGGGCCCGCAATTG
TGCCCGGCTACAGCACGATGGCGCCCCAGCAGCTTCAGGTTGCCGCGCCG
GTATACACCACTCCGCTACCACCGCAGCAGCAGCACATGATAGCAGCGAT
GCAGAAGCCAGGAATGACGGCGTCGGCGTTGGTACCAGAAGCGGGTGCCG
CGAGCGCACCTTTTCCCGAGCAATCGTTCCTTCAACTCAATCCACTCTAC
CCGGGGCTCCGCAGGCTGTGGGAGGCAATGCCCGCCCCTCTGTACGCGGT
GGACGACTTCTTCACCAGGCCGGAGTGCGACGCCCTCATGGCCCTCGCGT
CCAACTACATGATCGCAAGCCCCGTGGTTGGCCCCGGCGCAGGCGAGGTC
AGCGAGAGCCGCACCAGCAGCTCATGCTTTCTGGCGAGGGAGGACCTCCC
GACGGTGTGCCGGAAGGTCATGGCTCTCACGGGGAAACCCATCGAGCACC
TGGAGCTCCCGCAGCTCTACCCGGGGCTCCGCAGGCTGTGGGAGGCAATG
CCCGCCCCTCTGTACGCGGTGGACGACTTCTTCACCAGGCCGGAGTGCGA
CGCCCTCATGGCCCTCGCGTCCAACTACATGATCGCAAGCCCCGTGGTTG
GCCCCGGCGCAGGCGAGGTCAGCGAGAGCCGCACCAGCAGCTCATGCTTT
CTGGCGAGGGAGGACCTCCCGACGGTGTGCCGGAAGGTCATGGCTCTCAC
GGGGAAACCCATCGAGCACCTGGAGCTCCCGCAGGTCGGGCGGTACTACA
CCTCCCAGAAATACGCTAACCACTGGGACGCGTTCGACCTGACCACCGAG
GACGGCCGGAGGTTCGCGCAGAACGGCGGGCAGCGCGTGTGCACGGTGCT
GGTGTACCTCAACGACGTGGCGACCGGCGGCTGCACTGCCTTCCCACAGC
TGGGCCTCAAGGTGCAGCCGAAGAAAGGTCGGGCGGTACTACACCTCCCA
GAAATACGCTAACCACTGGGACGCGTTCGACCTGACCACCGAGGACGGCC
GGAGGTTCGCGCAGAACGGCGGGCAGCGCGTGTGCACGGTGCTGGTGTAC
CTCAACGACGTGGCGACCGGCGGCTGCACTGCCTTCCCACAGCTGGGCCT
CAAGGTGCAGCCGAAGAAAGGCATGGCGGTCGTCTTCTTCCCGGCGACGC
TGGACGGGGTCCTAGACTCGAGGCTGCTCCACGCCGCCGAGCCGGCCGTG
GACACCAAGTGGGTCTCCCAGATCTGGATCCGGCAGGGCCCCTACAGCGG
CACGCCCACCGCCAGGATACCTCAGATCTGAGCATGGCGGTCGTCTTCTT
CCCGGCGACGCTGGACGGGGTCCTAGACTCGAGGCTGCTCCACGCCGCCG
AGCCGGCCGTGGACACCAAGTGGGTCTCCCAGATCTGGATCCGGCAGGGC
CCCTACAGCGGCACGCCCACCGCCAGGATACCTCAGATCTGA
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