mRNA_P-fluviatile_contig8.14377.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14377.1 vs. uniprot
Match: D8LG27_ECTSI (Voltage dependent anion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG27_ECTSI) HSP 1 Score: 427 bits (1097), Expect = 2.980e-142 Identity = 211/276 (76.45%), Postives = 246/276 (89.13%), Query Frame = 1
Query: 1 MVVFYNDLNKVARDILNDDYSLARTLKMKHTTPHGLTVTSKSELTKGLNGAIEAKFFHAQSGVSIDKAKLNPDGSLGLEASRRDIAKNVKVVAKVNDVLKGEMTAEHVTQKSSTRATLDVEGKWMRASSCLAVGNSLLVGAQGDFAIGAPKASRKQDSTLKSYSVGVATGGSRWGSSLTCTNKMQTYNASAFYLLQTNLVGSVLASCTPENSQNSFQAGVKYTCNPKTTIRAKVNSAGVVTACVMNKCCDKVAVTVTASAAKKDTNPKFGVLCSLG 828
MVVFYNDLNKVARDIL+DDY+L RTLKMKHTTPHG+TVT+KSE +KG+NGA+EAKFFHA+SGVSIDKAKLNPDGS+GLEASRRD+AKNVK+VAKVNDVLKGE++ EH KSS+RATLDVEG WMR S+C+AVG+SLLVGAQGDF +GAPK DS LKSYSVG ATGGSRWG+SLTCTN MQT+NAS +Y+LQ NLVGSV+A TPE S+ SF+AGV+Y CNPKTT+RAK+NS G+V AC +N+C DKVA+TVTA+AAK DT PKFG+LC+LG
Sbjct: 50 MVVFYNDLNKVARDILSDDYNLKRTLKMKHTTPHGVTVTAKSEHSKGVNGALEAKFFHAKSGVSIDKAKLNPDGSMGLEASRRDVAKNVKLVAKVNDVLKGEVSMEHTVGKSSSRATLDVEGNWMRTSTCMAVGSSLLVGAQGDFIVGAPK-----DSALKSYSVGAATGGSRWGASLTCTNAMQTFNASGYYILQPNLVGSVMAVTTPEKSETSFEAGVRYQCNPKTTVRAKMNSNGLVQACAVNRCADKVAITVTAAAAKNDTTPKFGLLCALG 320
BLAST of mRNA_P-fluviatile_contig8.14377.1 vs. uniprot
Match: A0A6H5L9E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9E4_9PHAE) HSP 1 Score: 386 bits (991), Expect = 1.810e-127 Identity = 193/249 (77.51%), Postives = 220/249 (88.35%), Query Frame = 1
Query: 82 MKHTTPHGLTVTSKSELTKGLNGAIEAKFFHAQSGVSIDKAKLNPDGSLGLEASRRDIAKNVKVVAKVNDVLKGEMTAEHVTQKSSTRATLDVEGKWMRASSCLAVGNSLLVGAQGDFAIGAPKASRKQDSTLKSYSVGVATGGSRWGSSLTCTNKMQTYNASAFYLLQTNLVGSVLASCTPENSQNSFQAGVKYTCNPKTTIRAKVNSAGVVTACVMNKCCDKVAVTVTASAAKKDTNPKFGVLCSLG 828
MKHTTPHG+TVT+KSE +KG+NGA+EAKFFHA+SGVSIDKAKLNPDGS+GLEASRRDIAKNVK+VAKVNDVLKGE++ EH KSSTRATLDVEG WMR S+C+AVG+SLLVGAQGDF +GAPK DS LKSYSVG ATGGSRWG+SLTCTN MQTYNAS FY+LQ NLVGSV+A TPE S+ SF+AGV+Y CNPKTT+RAKVNS G+V AC +N+C DKVAVTVTA+AAK DT PKFG+LC+LG
Sbjct: 1 MKHTTPHGVTVTAKSEHSKGVNGALEAKFFHAKSGVSIDKAKLNPDGSMGLEASRRDIAKNVKLVAKVNDVLKGEVSMEHTVGKSSTRATLDVEGNWMRTSTCMAVGSSLLVGAQGDFIVGAPK-----DSALKSYSVGAATGGSRWGASLTCTNAMQTYNASGFYILQPNLVGSVMAVTTPEKSETSFEAGVRYQCNPKTTVRAKVNSNGLVQACAVNRCADKVAVTVTAAAAKNDTTPKFGLLCALG 244
BLAST of mRNA_P-fluviatile_contig8.14377.1 vs. uniprot
Match: A0A835YRG3_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG3_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.580e-55 Identity = 110/280 (39.29%), Postives = 160/280 (57.14%), Query Frame = 1
Query: 10 FYNDLNKVARDILNDDYSLARTLKMKHTTPHGLTVTSKSEL--TKGLNGAIEAKFFHAQSGVSIDKAKLNPDGSLGLEASRRDIAKNVKVVAKVNDVLKGEMTAEHVTQKSSTRATLDVEGKWMRASSCLA-----VGNSLLVGAQGDFAIGAPKASRKQDSTLKSYSVGVATGGSRWGSSLTCTNKMQTYNASAFYLLQTNLVGSVLASCTPENSQNSFQAGVKYTCNPKTTIRAKVNSAGVVTACVMNKCCDKVAVTVTASAAKKDTNPKFGVLCSLG 828
FY DL K D+L DDYSL TLK+KHTTPH + T+++E G+ G ++ K+ H SG S+DK L PDG +E S +A+ +K+ AK+ND +KG++ E V + + + ++ E + +S+ A G ++ GD + + L Y+ G++ GG+ W ++LT +NKM TYN SA Y NL +VLAS TPE+ + G+KY CNP T +RAK+ S G+V A + NKCC+ V+V V KD PKFG C+LG
Sbjct: 6 FYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDGVNAGGIVIAKLPGD-----------KPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG 274
BLAST of mRNA_P-fluviatile_contig8.14377.1 vs. uniprot
Match: A0A835YZM2_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM2_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.130e-50 Identity = 111/275 (40.36%), Postives = 155/275 (56.36%), Query Frame = 1
Query: 10 FYNDLNKVARDILNDDYSLARTLKMKHTTPHGLTVTSKSELTKG--LNGAIEAKFFHAQSGVSIDKAKLNPDGSLGLEASRRDIAKNVKVVAKVNDVLKGEMTAEHVTQKSSTRATLDVEGKWMRASSCLAVGNSLLVGAQGDFAIGAPKASRKQDSTLKSYSVGVATGGSRWGSSLTCTNKMQTYNASAFYLLQTNLVGSVLASCTPENSQNSFQAGVKYTCNPKTTIRAKVNSAGVVTACVMNKCCDKVAVTVTASAAKKDTNPKFGVLCSLG 828
FY DL KV D+L DD+SL RT+K+KHTTPH + T ++E KG + G ++ K+ H SG ++DK + +G+ +E S +A +K+ AKV+D +KG++ AE+V + + +DVE M S+ A V A G + P + + L Y+ GVA GG+ W ++LT TNKM TYN SA Y N+ VLAS TPE S G KY CNP TT+RAK S G++ A V +KC + + KD PKFG C+LG
Sbjct: 6 FYKDLTKVVNDLLTDDFSLKRTVKVKHTTPHNVNFTIENE-HKGSAVAGKVQLKYAHKPSGFALDKVTIAQNGAKTVECSLAGLAPGLKLTAKVDDAIKGDVGAEYVGAGFAIKTDMDVEATKMVTSATAAYEG---VNAGGIISAKLPG---DKPAALSDYNAGVAYGGTGWFTALTTTNKMATYNLSATYAPAKNVTAVVLASLTPETGAQSVVVGTKYVCNPNTTLRAKATSDGMLHAAVQHKCTQGLIIGAATEVNAKDMQPKFGFNCTLG 273
BLAST of mRNA_P-fluviatile_contig8.14377.1 vs. uniprot
Match: B8BQH4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQH4_THAPS) HSP 1 Score: 84.3 bits (207), Expect = 2.310e-14 Identity = 86/283 (30.39%), Postives = 133/283 (47.00%), Query Frame = 1
Query: 1 MVVFYNDLNKVARDILNDDYSLARTLKMKHTT-PHGLTVTSKSELTKGLNGAIEAKFFHAQSGVSIDKAKLNPDGSLGLEASRRDIAKNVKVVAKVNDVLKG-EMTAEHVTQKSSTRATLDVEG-KWMRASSCLAVGNSLLVGAQGDFAIGAPKASRKQDSTLKSYSVGVATGGSRWGSSLTCTNKMQTYNASAFYLLQTNLVGSVLASCTPENSQNSFQA----GVKYTCNPKTTIRAKVNSAGVVTACVMNKCCDKVAVTVTASAAKKDTNP-KFGVLCSL 825
M V Y+D+ K A+D+LNDDY+ + +LK K P G+TV ++ L+ + KF +A G++ DK + DGS LE S A KV K N KG ++ E+ T LDV + S+C+ V + VG + + KA L SY+VG + +S+T +K +N Y + +L LAS T +S + G TI+AKV S GV +AC++ + KV +T + S + D + K+G+ S+
Sbjct: 1 MAVKYSDIGKSAKDLLNDDYTNSISLKCKGKAGPVGVTVETERSPAGTLSSKVGTKFSYA--GLNFDKLQAKADGSNVLETSLAPCA-GCKVTFKAN---KGADLGVEYTAGSIVTTGALDVLNMSKLSTSTCIGVAPGINVGGDLSYNLSGDKAG------LSSYNVGASYATGPLFASVTSASKFSQFNVGVLYKVNKDLS---LASNTTHSSGKACDVLAIGGAYSGLAAVGTIKAKVGSNGVTSACLIKEVAPKVNLTASGSISGVDFSTFKYGLGISM 268
BLAST of mRNA_P-fluviatile_contig8.14377.1 vs. uniprot
Match: W7U0F0_9STRA (Voltage-dependent anion-selective channel n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0F0_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 5.270e-13 Identity = 39/78 (50.00%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 10 FYNDLNKVARDILNDDYSLARTLKMKHTTPHGLTVTSKSELTK-----GLNGAIEAKFFHAQSGVSIDKAKLNPDGSL 228
F+ D NK A ILNDDYSL RTLK+KH TP G+ VT+++ELT L I K+ HA +G S+DK +L G L
Sbjct: 8 FFKDFNKPADTILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETGGL 85
BLAST of mRNA_P-fluviatile_contig8.14377.1 vs. uniprot
Match: W7U446_9STRA (Voltage-dependent anion-selective channel protein 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U446_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.740e-8 Identity = 66/233 (28.33%), Postives = 107/233 (45.92%), Query Frame = 1
Query: 7 VFYNDLNKVARDILNDDYSLARTLKMKHTTPHGLTVTSKSELT-KGLNGAIEAKFFHAQSGVSIDKAKLNPDGSLGLEASRRDIAKNVKVVAKVNDVLK---------GEMTAEHVTQKS-STRATLDV-EGKWMRASSC--LAVGNSLLVGAQGDFAIGAPKASRKQDSTLKSYSVGVATGGSRWGSSLTCTNKMQ--------------TYNASAFYLLQTNLVGSVLASC 621
+F+ D + D+LNDD++ R LK+K TP G+T TS+ EL+ KG+ + AK+ H SG+S+DK + DG + EAS D+ +K+ D + G++ E+V+ S + +DV G + S LA LL G Q + + +K + Y+VG+A + W +S+ +KM T+ A Y + N G + C
Sbjct: 1 MFFKDFGRSTADLLNDDFTYKRKLKIKLPTPDGVTWTSEGELSSKGVMAKLAAKYKHP-SGISLDKLEFKSDGRVLGEASL-DVDSKLKLWVSAEDGRQDTGKPIKSHGKLGVEYVSPGILSALSDVDVVNGPTVNGSVVVNLAGKRGLLAGFQATYNTQLDEKDQKPE--FLDYNVGLAKVNTSWEASVRSYHKMSNLQFSLLSRVNPQVTFGAQLDYQVDKNTQGMTIGGC 229
BLAST of mRNA_P-fluviatile_contig8.14377.1 vs. uniprot
Match: B7GDE6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GDE6_PHATC) HSP 1 Score: 63.9 bits (154), Expect = 1.650e-7 Identity = 76/274 (27.74%), Postives = 127/274 (46.35%), Query Frame = 1
Query: 1 MVVFYNDLNKVARDILNDDYSLARTLKMKHTT-PHGLTVTSKSELTKGLNGAIEAK----FFHAQSGVSIDKAKLNPDGSLGLEASRRDIAKNVKVVAKVNDVLKG-EMTAEHVTQKSSTRATLDV-EGKWMRASSCLAVGNSLLVGAQGDFAIGAPKASRKQDSTLKSYSVGVATGGSRWGSSLTCTNKMQTYNASAFYLLQTNLVGSVLASCTPENSQ---NSFQAGVKYTCNPKTTIRAKVNSAGVVTACVMNKCCDKVAVTVTASAAKKD 792
M + DL+K +D+LNDDY+ + LK K P +T+ E T+G +GA+ +K F +A+ ++DK ++ DG LE S + + VK+ + KG ++ ++ LDV + + S+C + + L VG + + K L ++VG + +SLT ++K +A+ LL +LAS T S + G + P TI+AK NS GVV+AC++ + KV +T + S D
Sbjct: 1 MATKFADLSKGPKDLLNDDYTSSVVLKAKKNAGPVAVTI----ETTRGDDGALTSKVGTKFAYAK--FNVDKGQIKADGGRVLETSLK-VTPEVKLSFLAS---KGADLGVDYTKGNFYGTGVLDVMDMSLVSTSACYGLNSGLKVGGDAAYNLSGSKG-------LSGFNVGASYTAGPLFTSLTVSSK----SAATIGLLYKVNSDLMLASQTVHTSNKVCDVLGVGAAFKA-PVGTIKAKFNSGGVVSACLIREIAPKVVMTASGSVTGAD 252
BLAST of mRNA_P-fluviatile_contig8.14377.1 vs. uniprot
Match: A0A1J7FN40_LUPAN (Uncharacterized protein n=2 Tax=Lupinus TaxID=3869 RepID=A0A1J7FN40_LUPAN) HSP 1 Score: 60.8 bits (146), Expect = 1.980e-6 Identity = 60/278 (21.58%), Postives = 126/278 (45.32%), Query Frame = 1
Query: 13 YNDLNKVARDILNDDYSLARTLKMKHTTPHGLTVTSKSELTKGLN-GAIEAKFFHAQSGVSIDKAKLNPDGSLGLEASRRDIAKNVKVVA--KVNDVLKGEMTAEHVTQKSSTRATLDVEGKWMRASSCLAVGNSLLVGAQGDFAIGAPKASRKQDSTLKSYSVGVATGGSRWGSSLTCTNKMQTYNASAFYLLQTNLVGSVLASCTPENS--QNSFQAGVKYTCNPKTTIRAKVNSAGVVTACVMNKCCDKVAVTVTASAAKK--DTNPKFGVLCSL 825
++D+ K+A+D+LN DY+ + + + G+ +TS + G + G + A + H + V++ KL+ + ++ + DI + K +A K+ D G++ ++ ++ + L + S + S VG A GA + Y+ G++ +++ +K + AS + L + +A T + S +N F G Y + T ++A++N+ G + A + ++ K +T++ K D NP+FG+ +L
Sbjct: 8 FSDIGKIAKDVLNKDYTSDQKITFSSYSASGVALTSTAVKKSGFSTGDVAALYKHKNTLVNV---KLDTESNISTTLTFTDILPSTKTIASFKLPDYNSGKLEVQYFHDHATLQTILAL-------SQSPIIDVSATVGTPS-IAFGAEAGYDTKSGNFTKYTAGISITKPDSSAAIIIGDKGDSIKASYVHNLDLLRKSAAVAEFTKKFSTNENIFTVGGSYAVDHLTQVKARLNNNGKLGALIQHEIIPKSLLTISGEIDTKALDKNPRFGLAIAL 274
BLAST of mRNA_P-fluviatile_contig8.14377.1 vs. uniprot
Match: V4KU67_EUTSA (Uncharacterized protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4KU67_EUTSA) HSP 1 Score: 60.8 bits (146), Expect = 1.980e-6 Identity = 64/283 (22.61%), Postives = 120/283 (42.40%), Query Frame = 1
Query: 13 YNDLNKVARDILNDDYSLARTLKMKHTTPHGLTVTSKSELTKGLNGAIEAKFFHAQSGVSIDKAKLNPDGSLGLEASRR------DIAKNVKVV--AKVNDVLKGEMTAEHVTQKSSTRATLDVEGKWMRASSCLAVGNSLLVGAQGDFAIGAPKASRKQDSTLKSYSVGVATGGSRWGSSLTCTNKMQTYNASAFYLLQ--TNLVGSVLASCTPENSQNSFQAGVKYTCNPKTTIRAKVNSAGVVTACVMNKCCDKVAVTVTASAAKK--DTNPKFGVLCSL 825
Y ++ K ARD+L DY + L + + G+ +T T G N + F A + K D + ++S + +K + AK+ D G++ +++ + ++ + + S + N L +GA F + K ++ G + +SLT +K + NAS ++++ +N V S +N+ G ++ +P TT++A+VN AGV A + ++ K VT++ K + NPKFG +L
Sbjct: 8 YTEIGKKARDLLYKDYQGDQKLSITTYSASGVAIT-----TSGTN---KGDLFLADVATQVKNKKFTADIKVATDSSLLTTFTYDEATPGLKAILSAKLPDQKSGKVELQYLHDYAGISTSVGLTANPIVNFSGVVGTNVLALGADVSF--------NTESGNFKHFNAGFSFTKDDLIASLTLNDKGEKLNASYYHIVNPLSNTVVGAEVSHNFTTKENAITVGTQHALDPLTTVKARVNHAGVANALIQHEWRPKSFVTISGEVDSKSIEKNPKFGFALAL 274 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14377.1 >prot_P-fluviatile_contig8.14377.1 ID=prot_P-fluviatile_contig8.14377.1|Name=mRNA_P-fluviatile_contig8.14377.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=277bp MVVFYNDLNKVARDILNDDYSLARTLKMKHTTPHGLTVTSKSELTKGLNGback to top mRNA from alignment at P-fluviatile_contig8:861248..868900+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14377.1 ID=mRNA_P-fluviatile_contig8.14377.1|Name=mRNA_P-fluviatile_contig8.14377.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7653bp|location=Sequence derived from alignment at P-fluviatile_contig8:861248..868900+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:861248..868900+ >mRNA_P-fluviatile_contig8.14377.1 ID=mRNA_P-fluviatile_contig8.14377.1|Name=mRNA_P-fluviatile_contig8.14377.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1662bp|location=Sequence derived from alignment at P-fluviatile_contig8:861248..868900+ (Porterinema fluviatile SAG_2381)back to top |