mRNA_P-fluviatile_contig8.14375.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14375.1
Unique NamemRNA_P-fluviatile_contig8.14375.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig8.14375.1 vs. uniprot
Match: D8LG28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG28_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 4.190e-71
Identity = 144/247 (58.30%), Postives = 169/247 (68.42%), Query Frame = 3 
Query:  225 KQTVLRHGSSSVTAGAVAAPGVRSTEG---LRATRPSFSTKSDD-------ALIGRKAFPSVTSGKQRNTVSGPLEAVSGRAGEDLEDGGGKDLTVVRRALLLAIWLSFTAYAFGPWSPGATIDPNDIELVKHLYD-PVTPQTAIYTGVFNALGVLPAVMASLLIGGGAFRKGRQPVPAQPFVFGAFALGFFSVGPYLALRNYLPGQAGDEEAVEASGVEKVLTSKVLAALLLVAAVSLDFSIVKSL 932
            ++ +LR  S S  A A    G+RST     LRA R  F+T  DD       A  G +   +     +R T +G L+A SG    +  DG G+DLT VRRALLLAIWL FT YAFGPWSPGAT DP DIELV HLYD PV P+TAI+T VFNALG LP +MAS+L+GGG+F KGRQPVPA PFVFGAFALGFFS+GPYLA+RNYLP  AGDEE  E S +EKVLTSKVLA  LL  +  +  S+V +L
Sbjct:   53 ERQILRQ-SPSCPATASTTVGLRSTTPATCLRAARLPFATTDDDEDGDARPASRGARPAAAGLVDSRRQTAAGALKAASGAGAGEGRDGDGRDLTAVRRALLLAIWLPFTIYAFGPWSPGATGDPKDIELVTHLYDGPVVPETAIFTAVFNALGFLPGIMASMLVGGGSFGKGRQPVPAPPFVFGAFALGFFSLGPYLAVRNYLPQAAGDEEE-EMSTLEKVLTSKVLAVPLLAVSAYVFVSLVSAL 297
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BLAST of mRNA_P-fluviatile_contig8.14375.1 vs. uniprot
Match: A0A6H5L8J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8J8_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 1.920e-69
Identity = 134/259 (51.74%), Postives = 153/259 (59.07%), Query Frame = 3 
Query:  612 PQTAIYTGVFNALGVLPAVMASLLIGGGAFRKGRQPVPAQPFVFGAFALGFFSVGPYLALRNYLPGQAGDEEAVEASGVEKVLTSKVLAALLLVAAVSLDFSIVKSLA------------------------------------------------------------------------------DPEAVSGFTELFWSSKLAHISTLDFCVLSAVIVDPLREDMRRRGMEPELAKVALFSVPLVGPTLWMLVRPPVQ 1154
            P+TAI+T VFNALG LPA+ AS+L+GGG+F KGRQPVPA PFVFGAFALGFFS+GPYLA+RNYLP  AGDE   E S +EKVLTSK LA  LL  +  + FS+V +L                                                                               DPEA+S F ELFWSSKLAHIST+D CVLS VI+DP+REDMRRRG+EPELAKVALFSVPLVGP  WMLVRPPV+
Sbjct:    2 PETAIFTAVFNALGFLPAITASMLVGGGSFAKGRQPVPAPPFVFGAFALGFFSLGPYLAVRNYLPQAAGDE-GEEMSTLEKVLTSKALAVPLLALSAFVVFSLVSALTGRPFNHPRSIGVVRSISPTKFASLYSTSSLFLVPKRGCLDVPNRLEMHSHRTNWQKMKGSNIKPTPPTPLPSNPPPFQDPEAISAFGELFWSSKLAHISTMDLCVLSTVIIDPIREDMRRRGVEPELAKVALFSVPLVGPAAWMLVRPPVE 259
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BLAST of mRNA_P-fluviatile_contig8.14375.1 vs. uniprot
Match: A0A7S0J5P6_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J5P6_9EUKA)

HSP 1 Score: 150 bits (380), Expect = 9.030e-36
Identity = 90/231 (38.96%), Postives = 135/231 (58.44%), Query Frame = 3 
Query:  489 RALLLAIWLSFTAY--AFGPWSPGATIDPNDIELVKHLYDPVTPQTAIYTGVFNALGVLPAVMASLLIGGGAFRKGRQPVPAQPFVFGAFALGFFSVGPYLALRNYLPGQAGDEEAVEASGVEKVLT-SKVLAALLLVAAVSLDFSIVKSLADPEAVSGFTELFWSSKLAHISTLDFCVLSAVIVDPLREDMRRRGM------EPELAKVALFSVPLVGPTLWMLVRPPVQ 1154
            RA +  +W+ F+ Y  AF P     ++D  D  L+ +          I+  VFNALGVLPAV  +LL+ G     G++P+P  PFV  +FALG+ ++GPYLALR   P      E      V + +T SK+ AA LL A+++L + +   +  P A+S F +LF +SKL H+ST+DF +LS    +P+REDM RRG       +  + ++A F VP+VGP  ++L+RPP++
Sbjct:  294 RAAMALMWIGFSVYVAAFSPGEFSLSLDSMDNRLISNAIADPQSLNPIFFAVFNALGVLPAVNLALLLPGA---NGQKPLPTAPFVGASFALGYGALGPYLALREPRPSAISRSEL---GFVARYVTESKLYAAGLLAASMALGYGLATIVDVPAALSEFNQLFETSKLVHVSTIDFAILSTFAFEPIREDMSRRGWWDDDAADNNVGRLAAFCVPVVGPCAYLLLRPPLE 518
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BLAST of mRNA_P-fluviatile_contig8.14375.1 vs. uniprot
Match: A0A7S4BI97_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BI97_CHRCT)

HSP 1 Score: 134 bits (337), Expect = 2.570e-31
Identity = 89/228 (39.04%), Postives = 132/228 (57.89%), Query Frame = 3 
Query:  507 IWLSFTAYAF--GPWSPGATIDPNDIELVKHLYDPVT--PQTAIYTGVFNALGVLPAVMASLLIGGGAFRKGRQPVPAQPFVFGAFALGFFSVGPYLALRNYLPGQAGDEEAVEASG--VEKVLTSKVLAALLLVAAVSLDFSIVKSLADPEAVSGFTELFWSSKLAHISTLDFCVLSAVIVDPLREDMRRR------GMEP---ELAKVALFSVPLVGPTLWMLVRP 1145
            +WL F +YAF   P SP +     D E++   +D        A +   FN+LGVLPAV A+LL+ G    + ++P+PA PFV  + ALG+F + PYL  R     Q   E   ++ G  + +VL S++ AA L+ AA++L    + S  DP  +  F  +F +S+LAHIST+D  +LS++I +P+ EDMRRR      G  P   +L ++  F VP+VGPTL++L RP
Sbjct:  110 VWLLFISYAFIFAPNSPESAA--RDQEIILQFFDSARMFDINAYFFCTFNSLGVLPAVYAALLLPGA---EEQRPLPALPFVGSSIALGYFGIAPYLVFR-----QPRTEVTQQSFGGLLARVLESRLYAAPLVAAAIALAARAIGSADDPAVLDEFVNIFQTSQLAHISTIDLVILSSIIWEPMLEDMRRRQWAWSAGETPTAAQLGRLLAFLVPVVGPTLYLLTRP 327
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BLAST of mRNA_P-fluviatile_contig8.14375.1 vs. uniprot
Match: A0A836CCP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCP9_9STRA)

HSP 1 Score: 120 bits (301), Expect = 8.420e-28
Identity = 78/197 (39.59%), Postives = 114/197 (57.87%), Query Frame = 3 
Query:  579 ELVKHLYDPVTPQTAIYTGVFNALGVLPAVMASLLIGGGAFRKGRQPVPAQPFVFGAFALGFFSVGPYLALRNYLPGQAGDEEAVEASGVEKVLTSKVLAALLLVAAVSLDFSIVKSLADPEAVSGFTELFWSSKLAHISTLDFCVLSAVIVDPLREDMRRRGM------EPELAKVALFSVPLVGPTLWMLVRPPV 1151
            +L+ + +DP     A++  +FNALG++PAV A LL+      K ++PVPA PFV G+FA G F +GPYLALR Y P    DE ++   G+ K   SK+   L LV+A  L    V+S A    +  F  LF +  L H+ST+D  +LS V+ +P+ EDMRRRG         +L   A  ++P++GP  ++  RPP+
Sbjct:    4 DLISNPFDPQI--NALFLVIFNALGIMPAVFAQLLL---PASKDQKPVPAAPFVLGSFAGGLFLLGPYLALRQYRPRV--DETSL--GGLAKATNSKIGGVLTLVSACGLVAYAVQSGA-LATLPEFLTLFNAQTLVHVSTVDLSLLSLVMWEPMLEDMRRRGAYTDGSGSQKLKLAAFCAIPVLGPAAYVATRPPL 190
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BLAST of mRNA_P-fluviatile_contig8.14375.1 vs. uniprot
Match: A0A6U8J661_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6U8J661_9EUGL)

HSP 1 Score: 129 bits (323), Expect = 9.180e-28
Identity = 99/287 (34.49%), Postives = 153/287 (53.31%), Query Frame = 3 
Query:  324 SFSTKSDDALIGRKAFPSVTSGKQRNTVSGPLEAVSGRAGEDLEDGGGKDLTVVRRALLLAIWLSFTAYAFGPWSPGATIDPN--DIELVKHLYDPVTPQTAIYTGVFNALGVLPAVMASLLIGGGAFRKGRQPVPAQPFVFGAFALGFFSVGPYLALRN---YLPGQAGDEEAVEASGVEKVLTSKVLAALLLVAAVSLDFSIVKSLADPEAVSGFTELFWSSKLAHISTLDFCVLSAVIVDPLREDMRRRGM-----EPELAKVALFSVPLVGPTLWMLVRPPVQ 1154
            SF++    +  G +A P +  G  R +++ PL A S        DG  + L   R   + AI + F AYA G  +PG + +    D++LV  + +       I+  +FN+LG++PAV A+LL+ G       Q +PA PF+ G+FALGFF++ PYLALR    Y P   G        G  K++ +K+ A  L V+A+ L    ++  A    +  + +LF S KL H+S+LD  +LS V    + EDM+RRG        + A VA FSVP++GP  ++L+RP ++
Sbjct:  392 SFTSLKAGSTPGVEASPLL--GAPRQSLA-PLHATSTET-----DGTSESLVNARSLTIGAILILFMAYA-GLVAPGGSEEAQAKDLDLVMAIVNYTGEAGHIFFSIFNSLGIMPAVYAALLLPGSK----DQRLPAVPFIAGSFALGFFALAPYLALREWRPYAPASIG--------GFTKLMENKINATFLFVSALGLVAYGLQDFATQWPL--YLDLFGSQKLVHVSSLDLTILSCVFPFTVIEDMQRRGWYQTGDAKDKAVVAAFSVPVIGPAAYLLLRPKLE 655
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BLAST of mRNA_P-fluviatile_contig8.14375.1 vs. uniprot
Match: A0A836CEA7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA7_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.770e-25
Identity = 86/239 (35.98%), Postives = 131/239 (54.81%), Query Frame = 3 
Query:  483 VRRALLLAIWLSFTAYAFGPWSPG------ATIDPNDIELVKHLYDPVTPQTAIYTGVFNALGVLPAVMASLLIGGGAFRKGRQPVPAQPFVFGAFALGFFSVGPYLALRNYLPGQAGDEEAVEASGVEKVLTSKVLAALLLVAAVSL-DFSIVKSLADPEAVSGFTE---LFWSSKLAHISTLDFCVLSAVIVDPLREDMRRRGMEPELAK------VALFSVPLVGPTLWMLVRPPV 1151
            +R     AIW +  AYAF  ++PG      A +      L+ + + P   Q  +Y  +FNALGV+PA+ A LL+ G    KG++ +PA PFV  +FA G+F + PYLALR Y P    DE  +   G+  + T ++   L LV A+ L  F+I          + F E   LF S  L H+S++D  +LS V+ +P+ EDMRRRGM  + ++       A  ++P++GP +++ VRPP+
Sbjct:   44 LRAVTYTAIWTALVAYAF-LYAPGHTPEGDAAVTQMTAALMTNPFSPDINQ--LYVVIFNALGVVPAIYAQLLLPGS---KGQR-LPAAPFVLASFAGGYFLLAPYLALRQYRP--CVDEAQLR--GLATLSTLRLGGVLTLVFALGLLQFAITN-----HVWTSFEEYMLLFRSQTLVHVSSIDLLLLSVVVWEPMLEDMRRRGMYTDGSRSANIRLAAFCAIPVLGPAVYLAVRPPL 266
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BLAST of mRNA_P-fluviatile_contig8.14375.1 vs. uniprot
Match: R1DG74_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DG74_EMIHU)

HSP 1 Score: 121 bits (303), Expect = 1.950e-25
Identity = 87/230 (37.83%), Postives = 118/230 (51.30%), Query Frame = 3 
Query:  489 RALLLAIWLSFTAYAF--GPWSPGATIDPNDIELVKHLYDPVTPQTAIYTGVFNALGVLPAVMASLLIGGGAFRKGRQPVPAQPFVFGAFALGFFSVGPYLALRNYLPGQAGDEEAVEASGVEKVLTSKVLAALLLVAAVSLDFSIVKSLADPEA-VSGFTELFWSSKLAHISTLDFCVLSAVIVDPLREDMRRRGMEPE-------LAKVALFS-VPLVGPTLWMLVRP 1145
            RA +   W SF+AY     P     + D  D +L+    D  T    I+  VFNALG                  G++P+PA PFV  AF LGF + GPYLALR   P   G  E         V  S++    LL A   L + ++ S+ADP A +S + ELF SSKL H+S++D  VLSA   +P+REDM RRG   E       LA++  FS VP++GP  ++++RP
Sbjct:  348 RAAIALAWFSFSAYVALASPGEFSVSADSFDNQLIAKAIDDPTSLNPIFFAVFNALG------------------GQRPLPAAPFVSAAFFLGFGAAGPYLALRQPRPDPVGRSEL--GFFARYVTESRLYGGGLLAAGAVLLYGLL-SMADPAAALSDYAELFGSSKLVHVSSIDLLVLSAFAFEPIREDMARRGWWDEAAEGTNNLARLLAFSLVPVLGPAAYLVLRP 556
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BLAST of mRNA_P-fluviatile_contig8.14375.1 vs. uniprot
Match: A0A7S4F170_CHRCT (Hypothetical protein n=3 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F170_CHRCT)

HSP 1 Score: 114 bits (285), Expect = 3.820e-24
Identity = 75/192 (39.06%), Postives = 112/192 (58.33%), Query Frame = 3 
Query:  507 IWLSFTAYAF--GPWSPGATIDPNDIELVKHLYDPVT--PQTAIYTGVFNALGVLPAVMASLLIGGGAFRKGRQPVPAQPFVFGAFALGFFSVGPYLALRNYLPGQAGDEEAVEASG--VEKVLTSKVLAALLLVAAVSLDFSIVKSLADPEAVSGFTELFWSSKLAHISTLDFCVLSAVIVDPLREDMRRR 1064
            +WL F +YAF   P SP +     D E++   +D        A +   FN+LGVLPAV A+LL+ G    + ++P+PA PFV  + ALG+F + PYL  R     Q   E   ++ G  + +VL S++ AA L+ AA++L    + S  DP  +  F  +F +S+LAHIST+D  +LS++I +P+ EDMRRR
Sbjct:  110 VWLLFISYAFIFAPNSPESAA--RDQEIILQFFDSARMFDINAYFFCTFNSLGVLPAVYAALLLPGA---EEQRPLPALPFVGSSIALGYFGIAPYLVFR-----QPRTEVTQQSFGGLLARVLESRLYAAPLVAAAIALAARAIGSADDPAVLDEFVNIFQTSQLAHISTIDLVILSSIIWEPMLEDMRRR 291
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BLAST of mRNA_P-fluviatile_contig8.14375.1 vs. uniprot
Match: W7TMJ6_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMJ6_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.270e-23
Identity = 66/166 (39.76%), Postives = 96/166 (57.83%), Query Frame = 3 
Query:  657 LPAVMASLLIGGGAFRKGRQPVPAQPFVFGAFALGFFSVGPYLALRNYLPGQAGDEEAVEASGVEKVLTSKVLAALLLVAAVSLDFSIVKSLADPEAVSGFTELFWSSKLAHISTLDFCVLSAVIVDPLREDMRRRGMEPELAKVALFSVPLVGPTLWMLVRPPVQ 1154
            +P V  SLL+ G       Q  PA PF   +FALGFF++GPYLALR Y P     + A  +  + +V+ SK+ A L  +A++ L + IV  L        +  LF+S  L H+S+LD  +LS  +VDPLREDM RR        +A  ++P+VGP L++L+RP ++
Sbjct:    1 MPFVYTSLLLSGSR----DQIPPAWPFTLASFALGFFALGPYLALRRYRPFP---DTAHASPWLTRVMESKLPALLAFLASLYLAWLIVDGLVSAGGREAYLSLFYSQTLPHVSSLDLGLLSLFVVDPLREDMVRRQWYSPGRLLAFVALPVVGPCLYLLLRPTLK 159
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG28_ECTSI4.190e-7158.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8J8_9PHAE1.920e-6951.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0J5P6_9EUKA9.030e-3638.96Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S4BI97_CHRCT2.570e-3139.04Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A836CCP9_9STRA8.420e-2839.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U8J661_9EUGL9.180e-2834.49Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A836CEA7_9STRA1.770e-2535.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
R1DG74_EMIHU1.950e-2537.83Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S4F170_CHRCT3.820e-2439.06Hypothetical protein n=3 Tax=Chrysotila carterae T... [more]
W7TMJ6_9STRA1.270e-2339.76Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:853812..860464 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score123.6
Seed ortholog evalue1.7e-25
Seed eggNOG ortholog2903.EOD13485
EggNOG OGs2CTEY@1,2S4BR@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-11_002190.1
Exons7
Model size1738
Cds size1017
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817226.9170039-UTR-P-fluviatile_contig8:853811..8539541622817226.9170039-UTR-P-fluviatile_contig8:853811..853954Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 853812..853954 +
1693571575.532277-UTR-P-fluviatile_contig8:853811..8539541693571575.532277-UTR-P-fluviatile_contig8:853811..853954Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 853812..853954 +
1622817227.0008307-UTR-P-fluviatile_contig8:859029..8590651622817227.0008307-UTR-P-fluviatile_contig8:859029..859065Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 859030..859065 +
1693571575.6298058-UTR-P-fluviatile_contig8:859029..8590651693571575.6298058-UTR-P-fluviatile_contig8:859029..859065Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 859030..859065 +
1622817227.01161-UTR-P-fluviatile_contig8:859922..8604641622817227.01161-UTR-P-fluviatile_contig8:859922..860464Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 859923..860464 +
1693571575.6510828-UTR-P-fluviatile_contig8:859922..8604641693571575.6510828-UTR-P-fluviatile_contig8:859922..860464Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 859923..860464 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817226.9301453-CDS-P-fluviatile_contig8:853954..8540441622817226.9301453-CDS-P-fluviatile_contig8:853954..854044Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 853955..854044 +
1693571575.5486646-CDS-P-fluviatile_contig8:853954..8540441693571575.5486646-CDS-P-fluviatile_contig8:853954..854044Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 853955..854044 +
1622817226.9447927-CDS-P-fluviatile_contig8:854439..8546281622817226.9447927-CDS-P-fluviatile_contig8:854439..854628Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 854440..854628 +
1693571575.559482-CDS-P-fluviatile_contig8:854439..8546281693571575.559482-CDS-P-fluviatile_contig8:854439..854628Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 854440..854628 +
1622817226.955452-CDS-P-fluviatile_contig8:855505..8556801622817226.955452-CDS-P-fluviatile_contig8:855505..855680Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 855506..855680 +
1693571575.5698106-CDS-P-fluviatile_contig8:855505..8556801693571575.5698106-CDS-P-fluviatile_contig8:855505..855680Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 855506..855680 +
1622817226.9673493-CDS-P-fluviatile_contig8:856237..8564911622817226.9673493-CDS-P-fluviatile_contig8:856237..856491Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 856238..856491 +
1693571575.5798469-CDS-P-fluviatile_contig8:856237..8564911693571575.5798469-CDS-P-fluviatile_contig8:856237..856491Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 856238..856491 +
1622817226.9769733-CDS-P-fluviatile_contig8:857638..8577231622817226.9769733-CDS-P-fluviatile_contig8:857638..857723Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 857639..857723 +
1693571575.5902815-CDS-P-fluviatile_contig8:857638..8577231693571575.5902815-CDS-P-fluviatile_contig8:857638..857723Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 857639..857723 +
1622817226.9905815-CDS-P-fluviatile_contig8:858805..8590291622817226.9905815-CDS-P-fluviatile_contig8:858805..859029Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 858806..859029 +
1693571575.6083972-CDS-P-fluviatile_contig8:858805..8590291693571575.6083972-CDS-P-fluviatile_contig8:858805..859029Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 858806..859029 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14375.1prot_P-fluviatile_contig8.14375.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 853955..859029 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14375.1

>prot_P-fluviatile_contig8.14375.1 ID=prot_P-fluviatile_contig8.14375.1|Name=mRNA_P-fluviatile_contig8.14375.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=339bp
MAPLHTLSGIIFAISVTSCTAFVGAPPKQTVLRHGSSSVTAGAVAAPGVR
STEGLRATRPSFSTKSDDALIGRKAFPSVTSGKQRNTVSGPLEAVSGRAG
EDLEDGGGKDLTVVRRALLLAIWLSFTAYAFGPWSPGATIDPNDIELVKH
LYDPVTPQTAIYTGVFNALGVLPAVMASLLIGGGAFRKGRQPVPAQPFVF
GAFALGFFSVGPYLALRNYLPGQAGDEEAVEASGVEKVLTSKVLAALLLV
AAVSLDFSIVKSLADPEAVSGFTELFWSSKLAHISTLDFCVLSAVIVDPL
REDMRRRGMEPELAKVALFSVPLVGPTLWMLVRPPVQR*
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mRNA from alignment at P-fluviatile_contig8:853812..860464+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14375.1 ID=mRNA_P-fluviatile_contig8.14375.1|Name=mRNA_P-fluviatile_contig8.14375.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6653bp|location=Sequence derived from alignment at P-fluviatile_contig8:853812..860464+ (Porterinema fluviatile SAG_2381)
CTCAAGTAAACGCAAGTAACGCGGGGGCACAACGCTGGAGCTCACCTCTT
GTAGAGGCCCATGGGCGGATCCACGGAACCGCTCTGTCAGGGTTGGGTTG
CGGCAGTGCGACGAGACAAGAGACAGACAGAGAGATACGTAAGATGGCGC
CCCTCCACACTCTGTCAGGGATCATCTTTGCCATTTCGGTCACATCCTGC
ACGGCTTTCGTCGGTGCTCCTCCAAAGCAAACGGTGCGTGCCTGGTTCCA
CACCGCATCCAAATCTTGTTCGGTCGACACATGTTTGCTGTTTCGTGGAA
ACCAGTCAGGTTTTTACCGATTGGGGAACGTATACCCATCTTTCGTGTCG
AATGGGTTCCGCGACGAGAGGGATAGGATGCTTTATTATTCGATATGTTT
TTGTACCGCAATGAACAGTTTGCGTAAACCGTGTGGTTAACGCTCCCTCT
CATTCTTTAGTCCCGCCTCGGGCAGCGGCGTGCAGTCGTCAGACATTCCG
CATGTTGACCATCCGGCGTTAGCTGTCCTGGCTCACAACGGGTTCTGTGC
TTATACAAGGATGGCATGATAACGATTGCTCGTAACTCGTCCTCCCCAAA
TGCCTCCCACTCTCCGATGCTTTTCCAGGTCTTGCGCCACGGGTCTTCCT
CAGTGACTGCAGGTGCCGTGGCTGCACCCGGCGTCCGCAGCACCGAGGGC
CTGAGGGCAACCCGGCCGTCGTTCTCGACGAAGTCCGATGATGCCCTGAT
TGGCAGGAAAGCATTCCCCTCGGTGACTTCTGGTAAACAGAGAAACACCG
TATCAGGACCACTTGAGGTGGGGAAAGTGGCGACGCGGACTGTGTTGGCG
CCATCCGGCGAAAGCACTTTTGTGTTGTAGCACTGACTGTTGAGTTGGGA
GGGTTGTAGGAAGGCCGGGTTAGGTCCGTACGTGCGGAATCAACTGCACA
CGGGACGAAAAACCTACGGCTTTTGGCAAACCATCCCACCTCCATCGAGC
TGGACCACCGTGAGGAACCCGTTTGCGATACGCTGCTATACATACCCCCC
TCCCCGCACATGCTCCGTCCTCTCGAGGACGCGTGGTCAATGGTCTCACA
ACTAAGGCATGCAAAACATGAGTACGCCCCCTCCCCGCACAGTGGTGTCC
CCTACGCAGCATACGTTCAATCAAGAATATTTTCCCGAGTACTTTGCTCT
TTGACGAGGTGCACGATATGCACGCTTTGAGAGGGACGGACGCCGGTGGC
AGTTTCCGCATACGTTCTTTCTCTTGGCTTGATTGAAATTCCGCTCGAGT
GTCGAGCCCGCGGGCTTGCACACCCTTGAAACGACACGATAGACTCTCCT
TTTCCGGCCATCGAACTCTTTTCCCGGGAACCTCTGCTGACTGCCTCCAT
CACCAGTAGCGTGATCATGTTACCGGTGGTGCTAGACGAGCGCTGGACCA
TTTTCCTGTGCCTGAATCCCGTCAATAAACCCTCCGCTGACGCAACGCTT
GTTGTGGCATGCTCGCAGGAATTGCGGACAAATGGTCCCTGCTTAGGAAT
ACTCATGTTCAGAGTCCGACGCAGGACGCTGCTAGGTTTGAAGAAGCTGG
ACATGTAGATTTTGTGGCAAATTCAAACGACTGCTACGATGTTGGAGATT
TGTCATGAAGGTGGTGACGATGATGCCGATGCTGGCGAATACAGGCCGTC
TCGGGGCGAGCAGGCGAGGATCTGGAGGACGGCGGCGGGAAGGATCTCAC
GGTCGTGCGGCGCGCGCTGTTGCTGGCGATATGGCTGTCCTTTACCGCCT
ACGCGTTTGGGCCGTGGTCCCCTGGCGCCACGATCGACCCTAACGACATC
GAGCTGGTCAAACATCTCTGTAAGTTTGGCTCTACTTCGCGGTATGTTTC
TGATGGATAGTCACACCAACTAGTTTCCCCAGAAGCAAGTTCGCCGGCCG
CCTCCTTCACTAAATCTACCTCCCAGCCGCGCTAACCTTCCAAGGAGGGG
CAGCTGTGGCCAGGAGTGGAAATGGGGCGGGACTTGGGGGGCGCGGCGGG
AAGGGGTAGGGCCCAAGATCATGAATGCGGTAGTCAACAATCCTTAGACA
ATCGACTTCTTTCCCCGTTTCATGCGGACGGTGTGGCTATGCCACCAGGC
AGACAGCACTCTTCCCACCACTTTTCTGCTGGCACCATTCTCCGACCCAC
GCACTCTTTCCCATCCCAGATCGTCCCATCCCAGATCGTCCCATCCCATT
CCATTCCATTCCAATCCCACCCCTATCCCATCCCACCCCACCCTAACTTT
GGCCGTTCCGCATCCTCTCTCCCGCGGCGCGCGCAACCTGTTCTCCACAC
GGCGCTCGGCGGCCGAATGCCCAATCGCACGCATGGACACACACGCGCGG
GCACACACACGTGGTGGGGGGAAAAGACGACCCGGTGACACCCCAAACAG
CGATCTACACAGGCGTGTTCAATGCCCTTGGTGTACTGCCGGCGGTCATG
GCATCGCTGCTCATCGGGGGCGGCGCCTTCCGCAAGGGGCGGCAGCCGGT
GCCGGCGCAGCCCTTTGTGTTCGGCGCGTTCGCGCTCGGTTTTTTCTCGG
TTGGGCCCTACCTGGCCCTCAGGAACTACCTTCCGGGGCAAGCGGGGGAC
GAGGAAGCGGTCGAGGCGTCAGGGGTGGAGGTGCGTCTTGTGTGCGCTAT
GATAACTGCTGTGTCCATCTCTCCTGGGCGCTCTTGAGTGTGCGTTTGTG
TACGTGTATGTTACTTAACTAGAGAAGAACGCCCTATCCGGGTGGCCAAT
GAGGGCTTCGGGTGTACGCAAGCGCATGCGCGCGTGTATGCGGGCTTGTG
CCCGTACGGTGCTTATCGAGGGTGTCGCCTGTGCGTGCGTACCCTTCTTC
TCCTGCGGCAAGCAACATGGGCCAGGCAGCTCGCGCACACATGCGACTGT
GCCTGAATTCTGGTTGGGTGTGCATTTGTGTCCGGGCGTGCAAGATTGGT
ATCCGCTTCGTGTCTTTTGCATATGTTACGCCACATCTCGTTTGTATTGG
CTCCTTCGCGTGTGTTGTGTGTTACGCGCGTACATGCGTGCGGACGTGCT
TGCTTGTCCCTTTGCGGCAAGCAACACAGACGGGTCAGAAATTAAGATTG
CTGGTGTCTCCGCAGGGAGTGTCGCGTGTGTCTGCGGAGCGTTTCGATGT
GTGCAATCCTCTCTGCCATATGCGCAAGTAGCATACCTCCGCTGCTGAGG
AAATGTGCGAGCAAGGGAATCACTGTGCTCCGTAGATGCTTGCACGCTGG
GTGAATAAACGGCCCCAGTGGTCGCGACGAAAAGAAAGAACGGATGCACG
TTGTGCAAACTTGGTCATCACAACAGAATTCTTGGCAGAAGCAGTGTGTG
TAATTCGAAGGCTCGCGATTCAGATGGTGCTCGTGCACCCCTCTAGATCT
TCGGCAGGCGCTCATGGTAGAACGGACGGCGGTGCATGACTGTTTGTAAG
GTATTCGCGACTCGTCGCGAATGAAATTAGCAATCGTTCGGGGTAGGTCA
CGAAGACGGCTATGTGATTGGATGGAGCCTTCGCTTTTTTGGAACTTCCT
CATTAACCCGCGTACTTTGCGCTTTGCGAGACACACGTCCATGCAATAAT
TCGATGGATTCTTGTGAACTGAGTCCGCGATGCAGAGCAGGCTTGCTTGC
GACGACGACGACCGACTGCCTCAAATCGTCCGCTGCACATTCGGCCGGCC
CTCTCTGCCTCCCCCCTTACCGTCATTTCCCCTTACGCCCTTCGTTTCTG
AAATGTGTCATTCCTACTCGTTTGTAGAAAGTCCTCACCAGCAAGGTCTT
GGCCGCGCTCCTGCTGGTCGCGGCGGTATCCCTAGACTTCTCCATCGTCA
AGTCCTTGGCCGGTGAGTTTGGCTCTCGTTGCTGTTGCAACTTCTTTCCC
GCTTGAGCTCCGCGTTGTTTCGCTCGAATCCACGCGTCTCTAAAATTGTG
GCTACCGTCCACGTATTTCTGCACAGCCGAGTCAAGCCCCTTCTTTGCCT
CCCGAAAAACCGTGCGGTCCGGATTCGCTTACATCTTTGTGGGTGTTTTC
TGCATGTGATCTTTACACAATTGCGTGGCGCGTGCTGTTGGAAAGTCGTA
TTCGGGGCGCAGGGTGTGTTAGCTGCGGAGAGCCGAAGGTGCTGTAGATC
CTCGCCCACCACCCTGTTCATTGATGTAGTGGCCAATTTCCGGCATGGGA
AGGCGCGGCAAAGCGAGCGCCAAATCGAGATCCGTTCGCGAGATAAGATG
ATCGTGGTTGACCTCGTGGGGTGCGTCAACAGGACCCACGCATCGCAGCA
TTGAGGGATTGATAACGGAAGACGTGAAGGGCTAAGGTCGCTGCCTTTGC
GTGATACGAAGCTGTTTGTGGTATACCTCCGTGCATAAGGTTTGAGTTCT
TGGTTCGTGCGCAGCTTGCCGAATGTGCACGGTTCTTGTGCTGAATTGAG
GATCGGAGAGGTACCGCCACACCGTTTTCAATACCCTCGGCGTGCTAGAT
TTGAACGCCAGCACTGCTGCCGCACGCGGCGGAAGAAATCGCATCGAATA
ACTAACGTGAAACATTACCACCTCTTTGGAAATCAAGCAATGGTGAGCAT
CTTCGTTTGCGAAGAAAGGCGATTGAAGCTTGACTCAACATGTCTCTTGA
CAAACACGCTACCCCTCAGGCGATGGTCCGGAGACGACCCCCACCTCTGT
GTGTTGAAACGTCATGAGCTCGAGTTTTGGCTTATCCCGTTCCTGTCCGA
TAACGTGCCAGCCATATGCAATGTAAAAGGCATAGTGCCGCGGTGATATT
TATCCAATCAGGCCCGGCCAGCCCCGGTCCGACCTTCCTTCGTCCTGGCA
TTTCAAGGTCAAAGCGTCATGCCCTCTTCAAACCTGCAGCAAGAATCCAC
CCACGCCCCCCCTCACGCCACGCCTTCCTCGCTCGCGCGCGCAGATCCGG
AGGCAGTCTCGGGCTTCACCGAGCTCTTTTGGAGCTCGAAGCTGGCCCAC
ATCTCCACGCTGGACTTCTGCGTGCTGAGCGCGGTAATTGTCGACCCCCT
CCGCGAGGACATGCGTCGGAGAGGCATGGAGCCGGAGCTGGCGAAAGTCG
CCCTTTTCTCGGTCCCGCTGGTCGGCCCGACGCTCTGGATGCTGGTCCGG
CCGCCGGTACAGCGCTAATAAGGGTTGCCGCTTAAAGTAGTGTCCTTCGA
ATAGGCGATTGACTGGTTGTTTTTATGGGGGAGGGCGGGGGGGTTACACT
GAATGAAATAGGTGGAATCACAAATGTGATACGTGTGTGTGAAATTCCGG
GGGGGGGGGAATCGCTTGCCGAGTACAACAAGCCTAGGGATGCTAGTTCG
GCCTTCACGCTCCGGCGGCTGATGGTGACGGCAGTCGTCGTTTTTTGTCT
GGCTCTTTTCCGGCGACAAGTATTGAGGCATATCATGTCTTGTACCCCTG
TAATGCGATTCGAGCGTCATGTTGTGCGTCAGCGCGCAAGCAGGCAGCAA
AGGTGGAGATTGCGCCCGAGCGTGTCGCCGAGGTCGGAGGAAAAAGGAAA
CAAGAAGGCAGGGTCGCAGCAGATGGTGTGGGAATTGAATCGTCGAGAGG
AGGAGAACAGTGAGTCCAGTCTGCTTTGTGGCCCCAGTCGTGTCGGAAGA
TTGCACCACCCATGGGAGGTTATGGTATGGCTGACGACCGGCCGATATCT
CAACATTTAGGTTACAGTAGCTCGTACATCATGGCTGTGACCCCAATAAC
AATGGGGTCTTGGTATATGTTGCAAGTTCACGAGAGAACCAGATCGCCGG
AGATGCGCAACCGAACAAGACGGCGCACAGTCGCATGGCCGAGTCGTCAG
AGCATAGGATGGGTGTCGTCCCTCTTCGAGAATGCTGACTGCAACATTCC
ACGCCTTAAAGGTGAGCAATTCCTCAACGCTGGCCAAATTGGATCAACAT
CAGTACCAGAGCCCCCCACACCGCTGCTCTCGGATGGATAGGCTGGTTTG
TTTGCTTGTTGTGTCTCCGTGTTGCATGTTGAGCCACAACTCTGGTAGTA
GACTAGACTAGACTACATACCGTCGGCATCTCCGAACGAGCCGGTCGTGC
GATAATAAACCTTGAGTGACCAGACCTCCCGCCGCGATAGTCGGCCGCTC
CCGTGCTTGCGCGATCGAAGCAATCCTCGAACTCGTTTACATTTACCAAT
AGAACCCCGCCGCGCGGGCGGCATTCACACCCACCCCTCCTGTCACACAT
GCTTGTACACCTGCGGCTACACATTTGTTTACTCTCACTGCGTTCTTCGC
CGAACGACGGATACAAGGTTGGCGTTGGATCGGACAATTGAAAATTCCAT
GAGTTGTGTTATCGCCGACCTCGTACACTGCATTCCTCGAGATGTACAAC
AAACAACCTGTTGTTATTTTTTATGGCACCTACGAGCCGGCGACAGAACT
CGGCCTTACTATCCTCGTTCGGCGAACGGTCGGCGCTGCAAAACATGGTT
CAAGTCCTCCGTATCCTTTTACCTCCCTCGGCAAGCCCCTATCTCTACTA
ACTTTCATGGGCGTGCCCCAGCCATCCTCGGGTCCTCCCTTCTATTGGGG
AAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:853812..860464+

>mRNA_P-fluviatile_contig8.14375.1 ID=mRNA_P-fluviatile_contig8.14375.1|Name=mRNA_P-fluviatile_contig8.14375.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2034bp|location=Sequence derived from alignment at P-fluviatile_contig8:853812..860464+ (Porterinema fluviatile SAG_2381)
ATGGCGCCCCTCCACACTCTGTCAGGGATCATCTTTGCCATTTCGGTCAC
ATCCTGCACGGCTTTCGTCGGTGCTCCTCCAAAGCAAACGATGGCGCCCC
TCCACACTCTGTCAGGGATCATCTTTGCCATTTCGGTCACATCCTGCACG
GCTTTCGTCGGTGCTCCTCCAAAGCAAACGGTCTTGCGCCACGGGTCTTC
CTCAGTGACTGCAGGTGCCGTGGCTGCACCCGGCGTCCGCAGCACCGAGG
GCCTGAGGGCAACCCGGCCGTCGTTCTCGACGAAGTCCGATGATGCCCTG
ATTGGCAGGAAAGCATTCCCCTCGGTGACTTCTGGTAAACAGAGAAACAC
CGTATCAGGACCACTTGAGGTCTTGCGCCACGGGTCTTCCTCAGTGACTG
CAGGTGCCGTGGCTGCACCCGGCGTCCGCAGCACCGAGGGCCTGAGGGCA
ACCCGGCCGTCGTTCTCGACGAAGTCCGATGATGCCCTGATTGGCAGGAA
AGCATTCCCCTCGGTGACTTCTGGTAAACAGAGAAACACCGTATCAGGAC
CACTTGAGGCCGTCTCGGGGCGAGCAGGCGAGGATCTGGAGGACGGCGGC
GGGAAGGATCTCACGGTCGTGCGGCGCGCGCTGTTGCTGGCGATATGGCT
GTCCTTTACCGCCTACGCGTTTGGGCCGTGGTCCCCTGGCGCCACGATCG
ACCCTAACGACATCGAGCTGGTCAAACATCTCTGCCGTCTCGGGGCGAGC
AGGCGAGGATCTGGAGGACGGCGGCGGGAAGGATCTCACGGTCGTGCGGC
GCGCGCTGTTGCTGGCGATATGGCTGTCCTTTACCGCCTACGCGTTTGGG
CCGTGGTCCCCTGGCGCCACGATCGACCCTAACGACATCGAGCTGGTCAA
ACATCTCTACGACCCGGTGACACCCCAAACAGCGATCTACACAGGCGTGT
TCAATGCCCTTGGTGTACTGCCGGCGGTCATGGCATCGCTGCTCATCGGG
GGCGGCGCCTTCCGCAAGGGGCGGCAGCCGGTGCCGGCGCAGCCCTTTGT
GTTCGGCGCGTTCGCGCTCGGTTTTTTCTCGGTTGGGCCCTACCTGGCCC
TCAGGAACTACCTTCCGGGGCAAGCGGGGGACGAGGAAGCGGTCGAGGCG
TCAGGGGTGGAGACGACCCGGTGACACCCCAAACAGCGATCTACACAGGC
GTGTTCAATGCCCTTGGTGTACTGCCGGCGGTCATGGCATCGCTGCTCAT
CGGGGGCGGCGCCTTCCGCAAGGGGCGGCAGCCGGTGCCGGCGCAGCCCT
TTGTGTTCGGCGCGTTCGCGCTCGGTTTTTTCTCGGTTGGGCCCTACCTG
GCCCTCAGGAACTACCTTCCGGGGCAAGCGGGGGACGAGGAAGCGGTCGA
GGCGTCAGGGGTGGAGAAAGTCCTCACCAGCAAGGTCTTGGCCGCGCTCC
TGCTGGTCGCGGCGGTATCCCTAGACTTCTCCATCGTCAAGTCCTTGGCC
GAAAGTCCTCACCAGCAAGGTCTTGGCCGCGCTCCTGCTGGTCGCGGCGG
TATCCCTAGACTTCTCCATCGTCAAGTCCTTGGCCGATCCGGAGGCAGTC
TCGGGCTTCACCGAGCTCTTTTGGAGCTCGAAGCTGGCCCACATCTCCAC
GCTGGACTTCTGCGTGCTGAGCGCGGTAATTGTCGACCCCCTCCGCGAGG
ACATGCGTCGGAGAGGCATGGAGCCGGAGCTGGCGAAAGTCGCCCTTTTC
TCGGTCCCGCTGGTCGGCCCGACGCTCTGGATGCTGGTCCGGCCGCCGGT
ACAGCGCTAAATCCGGAGGCAGTCTCGGGCTTCACCGAGCTCTTTTGGAG
CTCGAAGCTGGCCCACATCTCCACGCTGGACTTCTGCGTGCTGAGCGCGG
TAATTGTCGACCCCCTCCGCGAGGACATGCGTCGGAGAGGCATGGAGCCG
GAGCTGGCGAAAGTCGCCCTTTTCTCGGTCCCGCTGGTCGGCCCGACGCT
CTGGATGCTGGTCCGGCCGCCGGTACAGCGCTAA
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