mRNA_P-fluviatile_contig8.14462.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14462.1
Unique NamemRNA_P-fluviatile_contig8.14462.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1644200..1645957 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size878
Cds size495
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14462.1prot_P-fluviatile_contig8.14462.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 1644326..1645285 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817216.11554-UTR-P-fluviatile_contig8:1644199..16443251622817216.11554-UTR-P-fluviatile_contig8:1644199..1644325Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1644200..1644325 +
1693571534.3880663-UTR-P-fluviatile_contig8:1644199..16443251693571534.3880663-UTR-P-fluviatile_contig8:1644199..1644325Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1644200..1644325 +
1622817216.1754453-UTR-P-fluviatile_contig8:1645285..16453121622817216.1754453-UTR-P-fluviatile_contig8:1645285..1645312Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1645286..1645312 +
1693571534.4393713-UTR-P-fluviatile_contig8:1645285..16453121693571534.4393713-UTR-P-fluviatile_contig8:1645285..1645312Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1645286..1645312 +
1622817216.1856883-UTR-P-fluviatile_contig8:1645727..16459571622817216.1856883-UTR-P-fluviatile_contig8:1645727..1645957Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1645728..1645957 +
1693571534.4496279-UTR-P-fluviatile_contig8:1645727..16459571693571534.4496279-UTR-P-fluviatile_contig8:1645727..1645957Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1645728..1645957 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817216.1332567-CDS-P-fluviatile_contig8:1644325..16446401622817216.1332567-CDS-P-fluviatile_contig8:1644325..1644640Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1644326..1644640 +
1693571534.4063048-CDS-P-fluviatile_contig8:1644325..16446401693571534.4063048-CDS-P-fluviatile_contig8:1644325..1644640Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1644326..1644640 +
1622817216.1460285-CDS-P-fluviatile_contig8:1644749..16448761622817216.1460285-CDS-P-fluviatile_contig8:1644749..1644876Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1644750..1644876 +
1693571534.4190629-CDS-P-fluviatile_contig8:1644749..16448761693571534.4190629-CDS-P-fluviatile_contig8:1644749..1644876Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1644750..1644876 +
1622817216.1602156-CDS-P-fluviatile_contig8:1645232..16452851622817216.1602156-CDS-P-fluviatile_contig8:1645232..1645285Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1645233..1645285 +
1693571534.429177-CDS-P-fluviatile_contig8:1645232..16452851693571534.429177-CDS-P-fluviatile_contig8:1645232..1645285Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1645233..1645285 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14462.1

>prot_P-fluviatile_contig8.14462.1 ID=prot_P-fluviatile_contig8.14462.1|Name=mRNA_P-fluviatile_contig8.14462.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=165bp
MLPSGLIPSFSSLCHRFEPESLVGRFPAKRARPTFFTRVPIRGHTEGFLS
LRRPSNLLRSLHSVVLEKHARVYGAKTVVPDLAVCAFSRALSFPLCRADG
RSPFFVCLFDFPAQTHRRQKLTEAGAGGVRPAGRSAVVQEVFDAIARKES
ETRRRGQSNDTAAA*
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mRNA from alignment at P-fluviatile_contig8:1644200..1645957+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14462.1 ID=mRNA_P-fluviatile_contig8.14462.1|Name=mRNA_P-fluviatile_contig8.14462.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1758bp|location=Sequence derived from alignment at P-fluviatile_contig8:1644200..1645957+ (Porterinema fluviatile SAG_2381)
GCAATGCTCGTGTCTCACTTGTATTTTCTCGCCCTCATCCATCGTTAGGT
AGAAGCTTTTGTCCCCCCTTTCCGCCGTCGTGCTGCCGCTGGCTTGTCTT
GCGCCTGCAAGAATGTGGACAGGCGCATGCTTCCGTCGGGGCTGATTCCA
TCCTTTTCGTCTCTCTGTCACCGCTTTGAACCAGAGTCGCTTGTAGGACG
CTTCCCTGCCAAACGCGCAAGGCCGACCTTTTTCACTAGAGTTCCAATTC
GTGGTCACACAGAGGGGTTCCTCTCCCTGAGGCGCCCATCCAACCTCCTA
CGATCCTTGCATTCCGTTGTGTTGGAGAAACACGCGCGAGTATATGGAGC
GAAGACTGTGGTACCTGACCTCGCTGTTTGTGCTTTCTCGCGGGCGCTCT
CGTTTCCTTTGTGCCGCGCAGACGGACGCTCCCCATTTTTTGTGGAGCTG
TTTCGCGCGGAACCCGGGGATGTTTTTTTTGTTTCAAGTGTTCCGCTTCT
TTCGTGTTTTGATTGTGCCCTTTCGCGCGGCCGCTTCTCGTGTGTTTTAG
GTGTGTTTGTTTGATTTTCCCGCGCAGACGCATCGGCGACAGAAGCTGAC
CGAGGCTGGCGCGGGAGGTGTTCGTCCGGCTGGGAGGAGCGCGGTAGTTC
AGGAGGTCTTCGATGCGATCGCAAGAAGTAAGGGGCTTGCGAGACCGCAG
ATTGAATGAACCGTTTCTGTGGAGCAAAGCAGATCGGTGCCGTGCTCTGT
GTCTGTTTCGGCTTCGTGCACAGGCGCAGCCGGCACGTACGAGAGATTTT
GTACACAAGTCTTGTGTTTTTCGCTCAGCCATCCAACCCTGTTTTCGATC
CGTCGAACATCCACGTTGTTTCCCCTTTCCCGCGCGCTTCTCCTTGGTTC
GCTTTGTCGTAAAGGCGCCTTCGCGTCGCCCGCCGCATTTGTCCAGCGCT
GCTATCTGTCTGTACCCCGCCCCTCTCGTTCGTCTGAAACGCCTGTCCCT
CCCCTTCATTTTGGACGGTGTCCGTGACTGCAGAAGAGAGTGAAACCCGT
CGAAGGGGTCAAAGCAACGATACGGCTGCTGCGTGAAAGTGTGGGGAGAA
ATCTTGGGCACTGGTGAGAGAGCGTGCGAAAATGGCCGTCTCAAGCAAAT
TGATCAATCCTATGTGTCACTGTTGTGCAACTGGGGGAAAGGGGGTGGCG
CCGATAAAAGTCGTATGGTGAGCCATTGCAGATTTTAGCGGTGAATCGAT
CTGATTTGAGCGCAGCCTGTGCTTGCCGAAGTCACGAGCGCACGCTTCTC
GTCTCGTTTTTGAGATTGTACGTGTCACTTTAGCTGAAACAGGCGGAGCC
GACTACCCGATGGATTTCGGCCGGGTCATCCTGTCGGAAGCTTCGAACCG
TTTCCATAGCTTCGTTCCGCCGCAGCACTACGTTGTTCCCTGGCTACTTT
CTTCCTGGGCTGCGTGCATCGGGGACACGCTATCTAAATGTTTTCGTTTC
CCACTCCCGCCACCGCTGCTTGGGACAGGCTGGATCTTTGCACACATCCC
AGCTGGAGTGCCTGCGCAAGAACACGAGGTGGGATAGATGAACCGCAATG
TACAACCCACCACACGAAGCCCTCCGGCACGGCGTGGCTCAGCGCTGCAC
CGGACGACAAGCTCGTGTGGCCAATCTCAAAGGAGCATGCGTGCCTAATC
ACAAGACCTGAGCTCAGCGGTGCAGTCTGAAGGACTGATTAGGCATGCAG
CAATGTCA
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:1644200..1645957+

>mRNA_P-fluviatile_contig8.14462.1 ID=mRNA_P-fluviatile_contig8.14462.1|Name=mRNA_P-fluviatile_contig8.14462.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=990bp|location=Sequence derived from alignment at P-fluviatile_contig8:1644200..1645957+ (Porterinema fluviatile SAG_2381)
ATGCTTCCGTCGGGGCTGATTCCATCCTTTTCGTCTCTCTGTCACCGCTT
TGAACCAGAGTCGCTTGTAGGACGCTTCCCTGCCAAACGCGCAAGGCCGA
CCTTTTTCACTAGAGTTCCAATTCGTGGTCACACAGAGGGGTTCCTCTCC
CTGAGGCGCCCATCCAACCTCCTACGATCCTTGCATTCCGTTGTGTTGGA
GAAACACGCGCGAGTATATGGAGCGAAGACTGTGGTACCTGACCTCGCTG
TTTGTGCTTTCTCGCGGGCGCTCTCGTTTCCTTTGTGCCGCGCAGACGGA
CGCTCCCCATTTTTTATGCTTCCGTCGGGGCTGATTCCATCCTTTTCGTC
TCTCTGTCACCGCTTTGAACCAGAGTCGCTTGTAGGACGCTTCCCTGCCA
AACGCGCAAGGCCGACCTTTTTCACTAGAGTTCCAATTCGTGGTCACACA
GAGGGGTTCCTCTCCCTGAGGCGCCCATCCAACCTCCTACGATCCTTGCA
TTCCGTTGTGTTGGAGAAACACGCGCGAGTATATGGAGCGAAGACTGTGG
TACCTGACCTCGCTGTTTGTGCTTTCTCGCGGGCGCTCTCGTTTCCTTTG
TGCCGCGCAGACGGACGCTCCCCATTTTTTGTGTGTTTGTTTGATTTTCC
CGCGCAGACGCATCGGCGACAGAAGCTGACCGAGGCTGGCGCGGGAGGTG
TTCGTCCGGCTGGGAGGAGCGCGGTAGTTCAGGAGGTCTTCGATGCGATC
GCAAGAAGTGTGTTTGTTTGATTTTCCCGCGCAGACGCATCGGCGACAGA
AGCTGACCGAGGCTGGCGCGGGAGGTGTTCGTCCGGCTGGGAGGAGCGCG
GTAGTTCAGGAGGTCTTCGATGCGATCGCAAGAAAAGAGAGTGAAACCCG
TCGAAGGGGTCAAAGCAACGATACGGCTGCTGCGTGAAAGAGAGTGAAAC
CCGTCGAAGGGGTCAAAGCAACGATACGGCTGCTGCGTGA
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