mRNA_P-fluviatile_contig8.14461.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14461.1
Unique NamemRNA_P-fluviatile_contig8.14461.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1641814..1643587 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1368
Cds size1368
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817216.0776045-CDS-P-fluviatile_contig8:1641813..16420161622817216.0776045-CDS-P-fluviatile_contig8:1641813..1642016Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1641814..1642016 +
1693571534.3610787-CDS-P-fluviatile_contig8:1641813..16420161693571534.3610787-CDS-P-fluviatile_contig8:1641813..1642016Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1641814..1642016 +
1622817216.0881867-CDS-P-fluviatile_contig8:1642422..16435871622817216.0881867-CDS-P-fluviatile_contig8:1642422..1643587Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1642423..1643587 +
1693571534.3770585-CDS-P-fluviatile_contig8:1642422..16435871693571534.3770585-CDS-P-fluviatile_contig8:1642422..1643587Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1642423..1643587 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14461.1prot_P-fluviatile_contig8.14461.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 1641814..1643587 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14461.1

>prot_P-fluviatile_contig8.14461.1 ID=prot_P-fluviatile_contig8.14461.1|Name=mRNA_P-fluviatile_contig8.14461.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=456bp
MRRGEVSADTPRNTRAGTAFDDMGRALDDGTVGGSNRGKDEKARGSKPES
PGKSTESSALSKRSKNSSPLAPGIAKSQRGDSDASPDACRASRGDKRRRE
SRDFVDGDSERSEKAKGGQPKEAGGSGGSGGHSNGRVTALLNTISHASVK
AWDATGMPTAKADEAGTERGDAAHACAKKRGVGGGGNKKVKKVKKEKKEK
KEKKEKERAKKEKQKKEKVTKATTAAPASPAGPAKPSPLDSFLCIAKGSD
KLSVECNVKPAENQQGDPAEAPAGPSIVSVANKASQGEQTSFASTGTIRV
EAAAAAAATAPEVAVGAAESAAPTVAPIEAAAPYPSPATPETYVKGDEVS
AMMPRSLRRPSSPGKVAGAGEGQADEESTKPVSPSGSAAPAAAAATYSRP
GACSGPENVSAGGGGRQWEQGGPTPVATNRREAQGEPALLGGGERTTQRG
DTSNTG
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mRNA from alignment at P-fluviatile_contig8:1641814..1643587+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14461.1 ID=mRNA_P-fluviatile_contig8.14461.1|Name=mRNA_P-fluviatile_contig8.14461.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1774bp|location=Sequence derived from alignment at P-fluviatile_contig8:1641814..1643587+ (Porterinema fluviatile SAG_2381)
ATGAGGAGAGGCGAGGTTTCTGCGGACACGCCCAGAAACACTCGCGCCGG
CACTGCTTTCGACGACATGGGCAGGGCACTTGACGATGGCACCGTCGGCG
GCAGCAACAGGGGCAAGGACGAGAAGGCCAGGGGCAGCAAACCAGAATCT
CCTGGAAAGAGCACCGAGTCTTCGGCATTGTCCAAAAGAAGCAAAAACAG
CAGGTATACCCAAAATCGGCTCGAGCCGCCCCCCGCTCTCCCTCGTGCTT
TGGTGTACCGTAACACTGCAGTCGTGGGCAAGGGGCGACGGCAGCCCTTG
CGCATGGAATCTGTCTTCGTGCCCAAGTCCTCTCGCCAGGATCTTAACTT
CTCATGAGCACATTGGAATGAAACAACGTGGGGAGCTATTTCTAAGTCGT
GCTGCTCCCACGAAAATGGGGTCAGTGCCGCAAAACGATCGACAATCTGA
ATCGCCTGCCGTACTTTCCTGCTGCATCAATCTGTCTGGACAGCTCACAG
ACAGCCCTGACCGGTATGTTACACTTCTCGTCGAACTCATTGCTTTTCAA
TGCCACTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTGTACCCG
CACGGTAAGTCCCTTGGCGCCTGGGATCGCCAAAAGTCAGCGCGGTGACA
GTGACGCAAGCCCCGATGCTTGCCGAGCAAGCCGTGGGGACAAGCGGAGG
AGGGAGTCAAGGGATTTCGTCGACGGTGATAGCGAACGCAGCGAGAAGGC
AAAGGGCGGCCAGCCTAAGGAAGCCGGCGGCAGCGGCGGCAGCGGCGGCC
ACTCGAACGGACGCGTCACGGCCCTCCTCAATACCATCTCTCATGCCTCG
GTCAAAGCGTGGGATGCGACCGGCATGCCGACGGCAAAGGCGGACGAAGC
CGGTACGGAGAGGGGCGATGCGGCGCACGCTTGCGCCAAAAAACGCGGGG
TTGGCGGCGGCGGCAACAAGAAGGTGAAGAAGGTGAAGAAGGAAAAGAAG
GAAAAGAAGGAAAAGAAGGAAAAGGAGCGGGCGAAGAAAGAGAAGCAGAA
GAAAGAGAAGGTGACCAAGGCTACCACCGCGGCCCCTGCTTCCCCTGCTG
GTCCTGCAAAACCATCGCCTCTCGACTCCTTCCTTTGCATAGCTAAGGGC
AGCGACAAGCTCAGCGTGGAATGCAATGTCAAGCCGGCGGAGAATCAGCA
GGGTGATCCGGCTGAGGCTCCCGCTGGCCCAAGCATTGTCTCGGTGGCCA
ACAAGGCAAGCCAGGGAGAGCAGACATCCTTCGCGTCAACGGGTACAATC
AGGGTAGAGGCAGCAGCAGCAGCAGCAGCAACAGCACCAGAGGTAGCAGT
AGGAGCCGCAGAAAGCGCAGCACCAACCGTGGCTCCGATCGAGGCGGCCG
CTCCGTATCCTTCGCCGGCGACGCCCGAGACGTACGTCAAGGGAGATGAG
GTCAGTGCCATGATGCCGAGGAGTCTGCGGCGGCCAAGTAGTCCGGGCAA
GGTCGCTGGAGCCGGGGAGGGCCAAGCGGACGAGGAGTCGACCAAACCTG
TTTCTCCTTCAGGTTCTGCTGCTCCTGCCGCCGCCGCCGCCACTTACAGC
AGGCCAGGGGCGTGCTCCGGTCCCGAGAATGTCTCGGCGGGCGGAGGAGG
GCGACAGTGGGAACAGGGAGGCCCGACGCCGGTCGCAACGAATCGCAGGG
AAGCCCAGGGAGAGCCAGCCCTTCTCGGCGGCGGGGAGAGGACTACCCAA
CGAGGGGACACCAGCAACACCGGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:1641814..1643587+

>mRNA_P-fluviatile_contig8.14461.1 ID=mRNA_P-fluviatile_contig8.14461.1|Name=mRNA_P-fluviatile_contig8.14461.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2736bp|location=Sequence derived from alignment at P-fluviatile_contig8:1641814..1643587+ (Porterinema fluviatile SAG_2381)
ATGAGGAGAGGCGAGGTTTCTGCGGACACGCCCAGAAACACTCGCGCCGG
CACTGCTTTCGACGACATGGGCAGGGCACTTGACGATGGCACCGTCGGCG
GCAGCAACAGGGGCAAGGACGAGAAGGCCAGGGGCAGCAAACCAGAATCT
CCTGGAAAGAGCACCGAGTCTTCGGCATTGTCCAAAAGAAGCAAAAACAG
CAGATGAGGAGAGGCGAGGTTTCTGCGGACACGCCCAGAAACACTCGCGC
CGGCACTGCTTTCGACGACATGGGCAGGGCACTTGACGATGGCACCGTCG
GCGGCAGCAACAGGGGCAAGGACGAGAAGGCCAGGGGCAGCAAACCAGAA
TCTCCTGGAAAGAGCACCGAGTCTTCGGCATTGTCCAAAAGAAGCAAAAA
CAGCAGTCCCTTGGCGCCTGGGATCGCCAAAAGTCAGCGCGGTGACAGTG
ACGCAAGCCCCGATGCTTGCCGAGCAAGCCGTGGGGACAAGCGGAGGAGG
GAGTCAAGGGATTTCGTCGACGGTGATAGCGAACGCAGCGAGAAGGCAAA
GGGCGGCCAGCCTAAGGAAGCCGGCGGCAGCGGCGGCAGCGGCGGCCACT
CGAACGGACGCGTCACGGCCCTCCTCAATACCATCTCTCATGCCTCGGTC
AAAGCGTGGGATGCGACCGGCATGCCGACGGCAAAGGCGGACGAAGCCGG
TACGGAGAGGGGCGATGCGGCGCACGCTTGCGCCAAAAAACGCGGGGTTG
GCGGCGGCGGCAACAAGAAGGTGAAGAAGGTGAAGAAGGAAAAGAAGGAA
AAGAAGGAAAAGAAGGAAAAGGAGCGGGCGAAGAAAGAGAAGCAGAAGAA
AGAGAAGGTGACCAAGGCTACCACCGCGGCCCCTGCTTCCCCTGCTGGTC
CTGCAAAACCATCGCCTCTCGACTCCTTCCTTTGCATAGCTAAGGGCAGC
GACAAGCTCAGCGTGGAATGCAATGTCAAGCCGGCGGAGAATCAGCAGGG
TGATCCGGCTGAGGCTCCCGCTGGCCCAAGCATTGTCTCGGTGGCCAACA
AGGCAAGCCAGGGAGAGCAGACATCCTTCGCGTCAACGGGTACAATCAGG
GTAGAGGCAGCAGCAGCAGCAGCAGCAACAGCACCAGAGGTAGCAGTAGG
AGCCGCAGAAAGCGCAGCACCAACCGTGGCTCCGATCGAGGCGGCCGCTC
CGTATCCTTCGCCGGCGACGCCCGAGACGTACGTCAAGGGAGATGAGGTC
AGTGCCATGATGCCGAGGAGTCTGCGGCGGCCAAGTAGTCCGGGCAAGGT
CGCTGGAGCCGGGGAGGGCCAAGCGGACGAGGAGTCGACCAAACCTGTTT
CTCCTTCAGGTTCTGCTGCTCCTGCCGCCGCCGCCGCCACTTACAGCAGG
CCAGGGGCGTGCTCCGGTCCCGAGAATGTCTCGGCGGGCGGAGGAGGGCG
ACAGTGGGAACAGGGAGGCCCGACGCCGGTCGCAACGAATCGCAGGGAAG
CCCAGGGAGAGCCAGCCCTTCTCGGCGGCGGGGAGAGGACTACCCAACGA
GGGGACACCAGCAACACCGGATCCCTTGGCGCCTGGGATCGCCAAAAGTC
AGCGCGGTGACAGTGACGCAAGCCCCGATGCTTGCCGAGCAAGCCGTGGG
GACAAGCGGAGGAGGGAGTCAAGGGATTTCGTCGACGGTGATAGCGAACG
CAGCGAGAAGGCAAAGGGCGGCCAGCCTAAGGAAGCCGGCGGCAGCGGCG
GCAGCGGCGGCCACTCGAACGGACGCGTCACGGCCCTCCTCAATACCATC
TCTCATGCCTCGGTCAAAGCGTGGGATGCGACCGGCATGCCGACGGCAAA
GGCGGACGAAGCCGGTACGGAGAGGGGCGATGCGGCGCACGCTTGCGCCA
AAAAACGCGGGGTTGGCGGCGGCGGCAACAAGAAGGTGAAGAAGGTGAAG
AAGGAAAAGAAGGAAAAGAAGGAAAAGAAGGAAAAGGAGCGGGCGAAGAA
AGAGAAGCAGAAGAAAGAGAAGGTGACCAAGGCTACCACCGCGGCCCCTG
CTTCCCCTGCTGGTCCTGCAAAACCATCGCCTCTCGACTCCTTCCTTTGC
ATAGCTAAGGGCAGCGACAAGCTCAGCGTGGAATGCAATGTCAAGCCGGC
GGAGAATCAGCAGGGTGATCCGGCTGAGGCTCCCGCTGGCCCAAGCATTG
TCTCGGTGGCCAACAAGGCAAGCCAGGGAGAGCAGACATCCTTCGCGTCA
ACGGGTACAATCAGGGTAGAGGCAGCAGCAGCAGCAGCAGCAACAGCACC
AGAGGTAGCAGTAGGAGCCGCAGAAAGCGCAGCACCAACCGTGGCTCCGA
TCGAGGCGGCCGCTCCGTATCCTTCGCCGGCGACGCCCGAGACGTACGTC
AAGGGAGATGAGGTCAGTGCCATGATGCCGAGGAGTCTGCGGCGGCCAAG
TAGTCCGGGCAAGGTCGCTGGAGCCGGGGAGGGCCAAGCGGACGAGGAGT
CGACCAAACCTGTTTCTCCTTCAGGTTCTGCTGCTCCTGCCGCCGCCGCC
GCCACTTACAGCAGGCCAGGGGCGTGCTCCGGTCCCGAGAATGTCTCGGC
GGGCGGAGGAGGGCGACAGTGGGAACAGGGAGGCCCGACGCCGGTCGCAA
CGAATCGCAGGGAAGCCCAGGGAGAGCCAGCCCTTCTCGGCGGCGGGGAG
AGGACTACCCAACGAGGGGACACCAGCAACACCGGA
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