prot_P-fluviatile_contig76.14104.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig76.14104.1
Unique Name	prot_P-fluviatile_contig76.14104.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	210

Homology

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BLAST of mRNA_P-fluviatile_contig76.14104.1 vs. uniprot
Match: D7FJC7_ECTSI (Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJC7_ECTSI)

HSP 1 Score: 372 bits (955), Expect = 7.230e-130
Identity = 191/209 (91.39%), Postives = 193/209 (92.34%), Query Frame = 0

Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARERTSGRAGEGASESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRAEQKSGCC 209
            M+SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK              ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEAR YAEDNGLIHMETSAKSAQNVK+IFVEIAQKLPKATVQPEREAFPIMRPR EQKSGCC
Sbjct:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK--------------ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 195

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BLAST of mRNA_P-fluviatile_contig76.14104.1 vs. uniprot
Match: A0A835Z7I1_9STRA (Rab5, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I1_9STRA)

HSP 1 Score: 323 bits (827), Expect = 2.240e-110
Identity = 166/205 (80.98%), Postives = 178/205 (86.83%), Query Frame = 0

Query:    5 RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARERTSGRAGEGASESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRAEQKSGCC 209
            RVCHFKLVLLGDTAVGKSCLVVRFVR+EFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK              +SFNGAKSWVKELQRRGDPNV+IALAGNKADLE RRQV  EEA  YAE+NG+IHMETSAKSA NVK+IFVEIA++LPKA  QPEREAFPIM PR ++K+G C
Sbjct:    3 RVCHFKLVLLGDTAVGKSCLVVRFVRNEFFEFQEPTIGAAFLTQTVGLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK--------------DSFNGAKSWVKELQRRGDPNVVIALAGNKADLEGRRQVHFEEAHAYAEENGIIHMETSAKSALNVKSIFVEIAKRLPKAGAQPEREAFPIMPPRRDKKAGGC 193

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BLAST of mRNA_P-fluviatile_contig76.14104.1 vs. uniprot
Match: F0YJN1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJN1_AURAN)

HSP 1 Score: 318 bits (816), Expect = 1.100e-108
Identity = 158/209 (75.60%), Postives = 181/209 (86.60%), Query Frame = 0

Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARERTSGRAGEGASESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRAEQKSGCC 209
            M SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L++ATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYD+TNK              ESFNGAKSWVKELQRRGDPNVIIALAGNKADL+++R+V+SEEA+QY+E+NG++HMETSAK+A +VK++F EIA+KLPK   QPER+AFPI+ P+  +   CC
Sbjct:    1 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQSVNLENATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNK--------------ESFNGAKSWVKELQRRGDPNVIIALAGNKADLQNKRRVESEEAKQYSEENGILHMETSAKNATHVKDLFQEIARKLPKTPPQPERDAFPIIPPKHNENKVCC 195

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BLAST of mRNA_P-fluviatile_contig76.14104.1 vs. uniprot
Match: A0A6V1MPB5_HETAK (Hypothetical protein n=2 Tax=Chattonellaceae TaxID=658124 RepID=A0A6V1MPB5_HETAK)

HSP 1 Score: 313 bits (802), Expect = 1.440e-106
Identity = 163/209 (77.99%), Postives = 173/209 (82.78%), Query Frame = 0

Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARERTSGRAGEGASESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRAEQKSGCC 209
            M SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQ V L +ATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK              +SFNGAKSWVKELQRRGDPNV+IALAGNK DLE RRQV  EEA  YA +NG+IHMETSAKSA NV+ IF++IA+KLPK   Q ERE FPIM P+ E K GCC
Sbjct:    1 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQTVSLPEATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK--------------DSFNGAKSWVKELQRRGDPNVVIALAGNKCDLEPRRQVPFEEAAAYAAENGIIHMETSAKSAHNVQQIFLDIAKKLPKNPPQVEREVFPIMPPKRESK-GCC 194

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BLAST of mRNA_P-fluviatile_contig76.14104.1 vs. uniprot
Match: A0A7S1ZIQ9_TRICV (Hypothetical protein n=3 Tax=Mediophyceae TaxID=589449 RepID=A0A7S1ZIQ9_TRICV)

HSP 1 Score: 310 bits (793), Expect = 1.440e-104
Identity = 156/206 (75.73%), Postives = 174/206 (84.47%), Query Frame = 0

Query:    3 SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARERTSGRAGEGASESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRAEQKSGC 208
            S RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LD+ATVKFEIWDTAGQERYRSLAPMYYRGAAAAI+VYD+TN               +SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA  YAE+NG++H+ETSAK+A NVK +FVEIA+KLPK   QPEREAFPI+ P+ E +S C
Sbjct:   45 SNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDEATVKFEIWDTAGQERYRSLAPMYYRGAAAAIIVYDITNP--------------DSFAGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEANAYAEENGILHLETSAKNASNVKALFVEIAKKLPKTPPQPEREAFPIVTPKQENRSCC 236

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BLAST of mRNA_P-fluviatile_contig76.14104.1 vs. uniprot
Match: T0Q598_SAPDV (Ras-like protein Rab-5A n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q598_SAPDV)

HSP 1 Score: 307 bits (786), Expect = 4.220e-104
Identity = 160/210 (76.19%), Postives = 173/210 (82.38%), Query Frame = 0

Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDA-TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARERTSGRAGEGASESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRAEQKSGCC 209
            M S + CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDD  TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK              +SF GAKSWVKELQRRGDPNVIIALAGNKADLE RR+V  EEARQYAE+N ++HMETSAK+A NVK++FV IAQKLPK   QPER+AFPI      +K+GCC
Sbjct:    1 MASNKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVSLDDGMTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK--------------DSFTGAKSWVKELQRRGDPNVIIALAGNKADLEARRKVDLEEARQYAEENEILHMETSAKTAVNVKDLFVAIAQKLPKNPQQPERDAFPITPVTPPKKNGCC 196

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BLAST of mRNA_P-fluviatile_contig76.14104.1 vs. uniprot
Match: A0A7S2RYM3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYM3_9STRA)

HSP 1 Score: 306 bits (785), Expect = 5.990e-104
Identity = 154/210 (73.33%), Postives = 177/210 (84.29%), Query Frame = 0

Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARERTSGRAGEGASESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRAEQ-KSGCC 209
            M + RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGA+AAIVVYD+TNK              +SFNGA+SWVKELQ+RGDPNV+IALAGNK+DLEH+R+V++EEA  YA +NG++HMETSAKSA NVK++FVEIA+KLPK   +  REAFPI+ P+  Q +  CC
Sbjct:    1 MAANRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMYYRGASAAIVVYDITNK--------------DSFNGARSWVKELQKRGDPNVVIALAGNKSDLEHKRKVETEEAEAYALENGILHMETSAKSATNVKSLFVEIARKLPKNPPETPREAFPIIPPKTSQSRRQCC 196

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BLAST of mRNA_P-fluviatile_contig76.14104.1 vs. uniprot
Match: A0A5D6XMY9_9STRA (Uncharacterized protein n=23 Tax=Oomycota TaxID=4762 RepID=A0A5D6XMY9_9STRA)

HSP 1 Score: 306 bits (785), Expect = 6.420e-104
Identity = 160/212 (75.47%), Postives = 175/212 (82.55%), Query Frame = 0

Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDA-TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARERTSGRAGEGASESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRP--RAEQKSGCC 209
            M  G+ CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDD  TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK              +SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA QYAEDN ++HMETSAK+A NVK++FV IA++LPK   QPEREAFPI  P  + + KSGCC
Sbjct:    1 MAQGKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLDDGLTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK--------------DSFTGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPHQPEREAFPITPPTNQKQNKSGCC 198

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BLAST of mRNA_P-fluviatile_contig76.14104.1 vs. uniprot
Match: B8BUG2_THAPS (Canine-like rab-type small G protein n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BUG2_THAPS)

HSP 1 Score: 306 bits (784), Expect = 7.660e-104
Identity = 156/207 (75.36%), Postives = 174/207 (84.06%), Query Frame = 0

Query:    3 SGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARERTSGRAGEGASESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRAEQKSGCC 209
            S RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V LDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYD+TN               +SF GAKSWVKELQRRGD +V+IA+AGNKADLE RRQV  EEA  YAE+NG++HMETSAK+A NVK +FVEIA++LPK+T QP+REAFPIM P+ ++   CC
Sbjct:    2 SNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVALDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDITNP--------------DSFAGAKSWVKELQRRGDQDVVIAMAGNKADLEARRQVDFEEANAYAEENGILHMETSAKNANNVKALFVEIARRLPKSTQQPDREAFPIM-PQKQESRNCC 193

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BLAST of mRNA_P-fluviatile_contig76.14104.1 vs. uniprot
Match: M4B2C3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2C3_HYAAE)

HSP 1 Score: 311 bits (797), Expect = 1.420e-103
Identity = 161/211 (76.30%), Postives = 179/211 (84.83%), Query Frame = 0

Query:    1 MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKVQLDDA-TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARERTSGRAGEGASESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRPRAEQ-KSGCC 209
            M+ G+ CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGAAFLTQ V L+D  TVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK              ESF+GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+ EEA QYAEDN ++HMETSAK+A NVK++FV IA++LPK  +QPEREAFPI  P+A + KSGCC
Sbjct:  150 MSQGKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVGLEDGLTVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNK--------------ESFSGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPIQPEREAFPITPPQASKSKSGCC 346

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig76.14104.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig76.14104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FJC7_ECTSI	7.230e-130	91.39	Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835Z7I1_9STRA	2.240e-110	80.98	Rab5, rab family GTPase n=1 Tax=Tribonema minus Ta...	[more]
F0YJN1_AURAN	1.100e-108	75.60	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A6V1MPB5_HETAK	1.440e-106	77.99	Hypothetical protein n=2 Tax=Chattonellaceae TaxID...	[more]
A0A7S1ZIQ9_TRICV	1.440e-104	75.73	Hypothetical protein n=3 Tax=Mediophyceae TaxID=58...	[more]
T0Q598_SAPDV	4.220e-104	76.19	Ras-like protein Rab-5A n=4 Tax=Saprolegniaceae Ta...	[more]
A0A7S2RYM3_9STRA	5.990e-104	73.33	Hypothetical protein n=2 Tax=Rhizochromulina marin...	[more]
A0A5D6XMY9_9STRA	6.420e-104	75.47	Uncharacterized protein n=23 Tax=Oomycota TaxID=47...	[more]
B8BUG2_THAPS	7.660e-104	75.36	Canine-like rab-type small G protein n=2 Tax=Thala...	[more]
M4B2C3_HYAAE	1.420e-103	76.30	Uncharacterized protein n=1 Tax=Hyaloperonospora a...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 136..156
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 161..183 score: 37.47 coord: 9..30 score: 50.96 coord: 126..139 score: 51.08 coord: 32..48 score: 32.53 coord: 50..72 score: 50.66
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 9..186 e-value: 4.3E-82 score: 288.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 6..186 e-value: 3.0E-26 score: 103.2
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 14..209 e-value: 1.9E-4 score: 14.4
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 11..185 e-value: 7.0E-11 score: 20.0
None	No IPR available	GENE3D	3.40.50.300		coord: 6..209 e-value: 1.7E-61 score: 209.1
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 7..191
None	No IPR available	PANTHER	PTHR24073:SF1090	RAS SMALL GTP-BINDING FAMILY PROTEIN-RELATED	coord: 7..191
None	No IPR available	PROSITE	PS51419	RAB	coord: 3..209 score: 30.792
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 10..183 e-value: 5.8E-55 score: 185.3
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 9..92 e-value: 9.1E-20 score: 69.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..200

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig76	contig	P-fluviatile_contig76:369945..375260 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig76.14104.1	mRNA_P-fluviatile_contig76.14104.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig76 368557..376481 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig76.14104.1 ID=prot_P-fluviatile_contig76.14104.1|Name=mRNA_P-fluviatile_contig76.14104.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=210bp
MTSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGAAFLTQKV
QLDDATVKFEIWDTAGQERYRSLAPMYYRGAAAAIVVYDVTNKARERTSG
RAGEGASESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEA
RQYAEDNGLIHMETSAKSAQNVKNIFVEIAQKLPKATVQPEREAFPIMRP
RAEQKSGCC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase