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Homology
BLAST of mRNA_P-fluviatile_contig76.14081.1 vs. uniprot
Match: D7G5B2_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B2_ECTSI) HSP 1 Score: 191 bits (486), Expect = 4.100e-55 Identity = 189/218 (86.70%), Postives = 198/218 (90.83%), Query Frame = 1
Query: 1 MKRGKRCYTVGCTAAAPFASPANPEVHACEIHKKRDFVNMRNKRCLAPGCYRNPHYGVSRLIDPNSKAQYXXXXXXXXXXXXXXXXXXXXXXXXXXRFSMPGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRVVIPGSAMKRGKFCEVHCDVNELAEKDAMSSDGASSDKKRSRAWAADM 654
MKRGKRC+ C A APFASP P+VHACE+HKKRDFVNMRNKRCL PGCYRNPHYGVSRLIDPNSKAQY XXXXXXXXXXXXXXXXXXXXXX RFS+PGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRVVIPGSA KRGKFCE+HCDVNEL +KD +S+DG +SDKKR RAW M
Sbjct: 1 MKRGKRCFIQSCLAPAPFASPLQPDVHACEVHKKRDFVNMRNKRCLEPGCYRNPHYGVSRLIDPNSKAQYCTKXXXXXXXXXXXXXXXXXXXXXXPRFSLPGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDRVVIPGSAKKRGKFCEIHCDVNELVDKD-VSTDGTASDKKRGRAWMTGM 217
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 1335 |
| Cds size | 1335 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817192.9555895-CDS-P-fluviatile_contig76:184925..185054 | 1622817192.9555895-CDS-P-fluviatile_contig76:184925..185054 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig76 184926..185054 + |
| 1693571461.0053296-CDS-P-fluviatile_contig76:184925..185054 | 1693571461.0053296-CDS-P-fluviatile_contig76:184925..185054 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig76 184926..185054 + |
| 1622817192.966741-CDS-P-fluviatile_contig76:186034..186137 | 1622817192.966741-CDS-P-fluviatile_contig76:186034..186137 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig76 186035..186137 + |
| 1693571461.0147686-CDS-P-fluviatile_contig76:186034..186137 | 1693571461.0147686-CDS-P-fluviatile_contig76:186034..186137 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig76 186035..186137 + |
| 1622817192.9780343-CDS-P-fluviatile_contig76:186631..186765 | 1622817192.9780343-CDS-P-fluviatile_contig76:186631..186765 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig76 186632..186765 + |
| 1693571461.024382-CDS-P-fluviatile_contig76:186631..186765 | 1693571461.024382-CDS-P-fluviatile_contig76:186631..186765 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig76 186632..186765 + |
| 1622817192.9906635-CDS-P-fluviatile_contig76:187150..187437 | 1622817192.9906635-CDS-P-fluviatile_contig76:187150..187437 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig76 187151..187437 + |
| 1693571461.2690594-CDS-P-fluviatile_contig76:187150..187437 | 1693571461.2690594-CDS-P-fluviatile_contig76:187150..187437 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig76 187151..187437 + |
| 1622817193.001402-CDS-P-fluviatile_contig76:188406..188717 | 1622817193.001402-CDS-P-fluviatile_contig76:188406..188717 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig76 188407..188717 + |
| 1693571461.555745-CDS-P-fluviatile_contig76:188406..188717 | 1693571461.555745-CDS-P-fluviatile_contig76:188406..188717 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig76 188407..188717 + |
| 1622817193.0122309-CDS-P-fluviatile_contig76:189183..189554 | 1622817193.0122309-CDS-P-fluviatile_contig76:189183..189554 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig76 189184..189554 + |
| 1693571461.569472-CDS-P-fluviatile_contig76:189183..189554 | 1693571461.569472-CDS-P-fluviatile_contig76:189183..189554 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig76 189184..189554 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig76.14081.1 >prot_P-fluviatile_contig76.14081.1 ID=prot_P-fluviatile_contig76.14081.1|Name=mRNA_P-fluviatile_contig76.14081.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=445bp
MKRGKRCYTVGCTAAAPFASPANPEVHACEIHKKRDFVNMRNKRCLAPGC YRNPHYGVSRLIDPNSKAQYCTKHKEPGMQNVNGGRCAGPDCTKQPRFSM PGEKGKYCSKHREEGMVDVLYTPCAAEGCKKHPHFGHVEGGPRYCAQHRS EGMVDVKHRRCAVKSCRKDRVVIPGSAMKRGKFCEVHCDVNELAEKDAMS SDGASSDKKRSRAWAADMDDENMSSESSQRGSSTAEFDNPSARSSVRASI HDAAQGLAHLAMLASRERAPPYAGAGPGISTPRDRIIPGERAPLRFSGYP GSFHRGTGRMKADRGPSDAEFDYPAKLGSTRFSPYSEGEILAQRDPYPLF KRGRIQPDEDPSEAGRPSVSPGRRGGGGNITSNDAVPPVSAAAQRFRLRY ASEFSTYPGPWEFTREEQAARWPKDRHVPGPEPAHGWDSSHSTA* back to topmRNA from alignment at P-fluviatile_contig76:184926..189554+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig76.14081.1 ID=mRNA_P-fluviatile_contig76.14081.1|Name=mRNA_P-fluviatile_contig76.14081.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4629bp|location=Sequence derived from alignment at P-fluviatile_contig76:184926..189554+ (Porterinema fluviatile SAG_2381) ATGAAGAGAGGCAAGAGATGCTACACCGTGGGCTGTACTGCGGCCGCTCC
TTTCGCAAGCCCAGCAAATCCGGAGGTCCATGCGTGCGAGATCCATAAAA
AGAGAGACTTCGTCAACATGAGGAACAAGGTGAGAGACTTGTGTGTGCAA
CAGACGCTCCATTTACCCAGTGCCCTCTGTGCCCTGCACCGCTGGGCTGG
TTTCCGCTGTCTTTTTCGAAGATGAAATAGAAATTTAAAGCGCGGCAGTG
GCGGCAAGTACTGCAAAGGCAACAACGGCGAACAATGTTGCAGTATGTCT
GCACCACGGGCGTGCTGCTGCCACAATCCCCACTGGCAAAAGAGCAAACA
CTTCACCGAGTGTCTGGGAGACGCCTTCCATTATGTATCTGCCAACGCAT
AGGCCGCAGCACGCACGTACAGACATCCACCATCCTGTGCGTGTGTTCGA
CGCCCGGTAAACAAGAGAATATCTGCCATACGGGCGTGTGCTGCTGCCAC
ACTCGCCGCATTGGCACATGCGCACACACTTCACTGAGTGCGTGGGAGAC
GCCTACCAACAAGTATCTGCCAAGGCATAGGCCACAGCTCGCATGTACAG
ACACCCGGCATCCTGTGCGTGTGTTTGACGCCCGGTAAACGAGAGGAAGG
GAGAAATGCGAGATTCGAGCATGATACGAGCAAATCCGACCAAGGAGTAT
TTGTGCCAAATGAACCGCGCCGGTCAAGGTTGCGTAAGGGATAGTGGAGC
GAGAGAATGTTCCCTCTGCGCTTGCCCTCATTCGGGAGGGACTGGACGTC
CATGAACTGCCCTGTCTATTTAGCGTAGCGGCGTGGGCTACCCTGGGGAA
ACACTTTGGTTCCTCGAACCGCCATTCGCGGAGACCTCGAGACACGTGCG
TAGTCTACGCATCAGTCACCTAAAAAAATGCGACCAACAGAATAATGAAA
CCGTCGTATGCGGCGGAACTTCCACATTTTGAACTTTACGCACCCGCGCG
CGCAATCCACACACGGCGGCCTTATCAAAGAGAGCATCCACTGACTTTTA
CTATGCATCTGTGCCTTTGCTACGCTGAACACTCCCGATGATGCCATGTA
TTGCTGCAGCGTTGCCTGGCGCCTGGATGCTATCGTAATCCCCATTACGG
AGTGAGCAGGCTCATCGATCCCAACAGCAAGGCCCAGTACTGCACCAAAC
ACAAGGAACCTGGTGAGCTTTTGGTGGATTAGACTATGGTGTTTGATGTT
TCGTTCCTAGTCTTAGTATGGGCGGCATGTCATAATGACTCAAAAGTGTC
CAAAGCTTTCTTGTCCCGGCGGGCCACGGAGCTTTCGCATTCTCACCCTC
AGCCGGTTGTAAAAACCAGGAGCGGTGTTGTCCAAATTTTCCGACTGCCC
GAACGATTTGCGTGTTCAACGCTGTTCTGGCCTGCTGGAGATATCAGGTA
GTATCTTTGGAGAGGTAAAGACCACAATTGCATGTTCATCGAAAGCGATA
TTCAAAATGCTGCTGGAAGGAATTGTCTAGAAAAGTGAAGGCACTAGCGG
GTCGAATGATGGCTTGGGGCCAAACGACGACGTACGTGCTGCTTTTGCTT
CTCCAACCAAGAAGAGAGACATCTGCCCGCTGCTGCTATGGCCTCTGGTA
TTCATCAAGTAATCTTCGTGCCTCGATGGCATCCTCGATCACGCGCGGCT
TACCAGGTATGCAGAACGTCAACGGGGGCAGGTGTGCTGGGCCAGACTGC
ACAAAGCAGCCCCGGTTTTCCATGCCCGGCGAGAAGGGCAAGTACTGCTC
CAAGCACCGCGAAGAGGGGATGGTCGACGTGCTTTACACGGTGAGCCAGC
TGCAACTCAACTGCGTTCACGGAAGATTTATGTTTCCATGCCGTTTGGTC
AAAATACCTTCCAAGGTTGGCCTTAGGCACTCGTCGAAAGTATCGGCAAA
TCTCGCGAATTTTGACCAGCAGCTCCAGCCGATCCCCAAGTATGATGTCC
TCCGTTGCTTCTCGCGTGCACAGTGATGACGGCGCTGTGGCCCTGACGAC
CAAAGATGAGCGTGACTGCACCATAAATTGATTAAGCTTGAGATTTTGAT
GTAGGCGTGGAGTATGTCAGTGCGTTCGGCGAACGTTTTGCTTCGCCCTC
TCAGCCCTACCTCGCGAACCCATTCGGCACCCGACCCGACCTCTGTCGGT
TCCTACTTGGCTCGGTCCGATCCAGCCATGCGCCGCCGAAGGATGCAAAA
AGCACCCCCATTTCGGCCACGTCGAGGGCGGGCCGCGTTACTGCGCTCAG
CACCGCTCGGAGGGGATGGTCGACGTCAAGCACAGGCGTTGCGCAGTCAA
GAGCTGCCGCAAGGACCGCGTGGTGATCCCGGGCAGCGCGATGAAGCGGG
GGAAGTTCTGCGAAGTCCACTGCGACGTCAACGAGCTGGCAGAGAAGGAT
GCCATGTCTAGTGACGGGGCGTCGAGCGACAAGAAGCGCAGCCGCGCGTG
GGCAGCGGACATGTTAGTCAATCGATCGACGCTTTAACGCTCTACTGTTC
TTGTTGATGATATGGCCGCCTTCTCAACGCCGCTTAGCTGACATCAGTTG
CACCGTGATGATTCGTAGAGCGCGCATCCTTTTTTCTGAGGTTCCACCCA
TGAGACGGTCTCCCTCAAGCCTGACCCAATGGGTGAATTTCCAAATAGTG
TGACAACGGGTCTACAGTGATGAAACGAATCGAACACGGGAAAAAGTACC
CCCCTCCCCCCCTTCTAGAGTATCTCAGAAGCCTTTGAAAATAGAAAAGA
CCAGAGCTTGCGGAAAGAGACCAAGGAAAAGGAGGTTCTAGAAGTGTACG
GAAAGGCTGAACGAAGGAATAGGGTTCAAGGAGTACTTGAACGGACCATT
GGATGAAGGGACAAGATGAAGGTCAAATTTAGAACGGGCGACATTGACCT
TCGGGAACGTAGAAGGAGGTTTAGGAAGGTAGACGACGACGAAGACAAGT
TCAAATGTGACTGCGGCGCCGAATACGAAGACCGGGTACATGTAGTTGCG
AAATGCCCGTTGTACGATCAGGAGAGAGAAGGGTACATGGTTGAGCTGGA
AAAAGTAGACAGTCGGTATAGAGAGAAGTTTGAGGCATGGAACAAAGAGG
AGAAGACGGTAGCGGTACTCGGGTGTAATATGTGGCCCAGGAAGGACAGG
TATAAAGTAGACAGGTTAGGGAAAACATTTTTGAGCCACCTTTGGTAATA
TGTGGCCCAGGAAGGACAGGTATAAAGTAGACAGGTTAGGGAAAACATTT
TTGAGCCACCTTTGGCAAAGTAGGAAGAAACGATTGGCCATCGGTGGTCG
ATCCTGCGGGAACAATGCTCCGTCCTCTCGAGGACGCGTGGTCAATGGTC
TAACAACTAAGGCATGCAAAACATGAGTACGCCCCCCCCCCTCTCCCCCC
CTTCTGCTGCCCGCGGTACTGGCGGTTGCAGGGACGACGAGAATATGAGC
TCGGAGAGCTCCCAGCGCGGGTCGTCGACCGCCGAATTCGATAACCCATC
GGCGAGGTCGTCGGTGAGAGCGAGTATTCACGACGCAGCGCAAGGGCTAG
CGCACCTCGCCATGCTGGCCAGCAGGGAACGAGCCCCGCCGTACGCAGGT
GCCGGACCCGGAATTTCCACGCCACGAGACCGTATAATCCCCGGCGAACG
CGCCCCGCTCCGGTTTTCCGGCTACCCCGGGAGCTTCCACCGCGGGACGG
GAAGGATGAAAGCCGACAGAGGTCCTTCTGACGCCGAATTTGGTGAGAGC
GGAAAAGCTCAGGACAGCACAGCACCGCAAATTACGTTACCTCATCGCGA
GCTGCGATCTCGGTTGGCTCGATAGGTCGCTGTCGCGGGAATGAGTTGGA
TCAGTCGGGGCAGAGCGATGTGAAGGCCTTTCTCTTGTCAGTGCCCCTGG
TTTTCTTTGAGGTGTGGGCCAAATCGACTGGAACAGAAAACCATGGCTGT
ACTTCGGGGGTCCCGAGCCCCTCCGACGTCCGGAGATCACTCTCTGGATG
ATACACACGAAATCCAGCTCGAGAACTGGATGCAAGCTTTCTTTTCCCGT
TCTATTACGTTCTCTGGTCTATTTGTAAGAGCTCCACCTTCAAATCTAAT
CATGAGGCAATGCACACGTTCACCGTACATTTTCCTTACGGAGATGGGTT
CACATCGCCACATCAGCAACGTCCCGGCCAACCCCGCACGCCGTACCTTC
CCCGCCAGACTACCCCGCCAAGCTTGGAAGCACGAGATTCTCCCCCTACT
CCGAGGGCGAGATCCTCGCCCAACGAGACCCCTACCCGCTCTTCAAGCGG
GGTAGGATCCAGCCCGACGAGGATCCTTCCGAGGCCGGGAGACCGAGCGT
GTCTCCAGGCCGTCGCGGCGGAGGAGGCAACATCACCAGCAACGACGCTG
TCCCTCCTGTGTCTGCGGCTGCTCAGCGTTTCCGCCTTCGCTATGCGTCC
GAGTTCTCGACCTACCCTGGCCCGTGGGAGTTCACCAGGGAGGAGCAGGC
CGCGCGCTGGCCAAAAGACCGCCACGTTCCCGGCCCTGAACCGGCGCACG
GGTGGGACAGTAGCCATTCCACCGCGTGA back to topCoding sequence (CDS) from alignment at P-fluviatile_contig76:184926..189554+ >mRNA_P-fluviatile_contig76.14081.1 ID=mRNA_P-fluviatile_contig76.14081.1|Name=mRNA_P-fluviatile_contig76.14081.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2670bp|location=Sequence derived from alignment at P-fluviatile_contig76:184926..189554+ (Porterinema fluviatile SAG_2381) ATGAAGAGAGGCAAGAGATGCTACACCGTGGGCTGTACTGCGGCCGCTCC TTTCGCAAGCCCAGCAAATCCGGAGGTCCATGCGTGCGAGATCCATAAAA AGAGAGACTTCGTCAACATGAGGAACAAGATGAAGAGAGGCAAGAGATGC TACACCGTGGGCTGTACTGCGGCCGCTCCTTTCGCAAGCCCAGCAAATCC GGAGGTCCATGCGTGCGAGATCCATAAAAAGAGAGACTTCGTCAACATGA GGAACAAGCGTTGCCTGGCGCCTGGATGCTATCGTAATCCCCATTACGGA GTGAGCAGGCTCATCGATCCCAACAGCAAGGCCCAGTACTGCACCAAACA CAAGGAACCTGCGTTGCCTGGCGCCTGGATGCTATCGTAATCCCCATTAC GGAGTGAGCAGGCTCATCGATCCCAACAGCAAGGCCCAGTACTGCACCAA ACACAAGGAACCTGGTATGCAGAACGTCAACGGGGGCAGGTGTGCTGGGC CAGACTGCACAAAGCAGCCCCGGTTTTCCATGCCCGGCGAGAAGGGCAAG TACTGCTCCAAGCACCGCGAAGAGGGGATGGTCGACGTGCTTTACACGGT ATGCAGAACGTCAACGGGGGCAGGTGTGCTGGGCCAGACTGCACAAAGCA GCCCCGGTTTTCCATGCCCGGCGAGAAGGGCAAGTACTGCTCCAAGCACC GCGAAGAGGGGATGGTCGACGTGCTTTACACGCCATGCGCCGCCGAAGGA TGCAAAAAGCACCCCCATTTCGGCCACGTCGAGGGCGGGCCGCGTTACTG CGCTCAGCACCGCTCGGAGGGGATGGTCGACGTCAAGCACAGGCGTTGCG CAGTCAAGAGCTGCCGCAAGGACCGCGTGGTGATCCCGGGCAGCGCGATG AAGCGGGGGAAGTTCTGCGAAGTCCACTGCGACGTCAACGAGCTGGCAGA GAAGGATGCCATGTCTAGTGACGGGGCGTCGAGCGACAAGAAGCGCAGCC GCGCGTGGGCAGCGGACATCCATGCGCCGCCGAAGGATGCAAAAAGCACC CCCATTTCGGCCACGTCGAGGGCGGGCCGCGTTACTGCGCTCAGCACCGC TCGGAGGGGATGGTCGACGTCAAGCACAGGCGTTGCGCAGTCAAGAGCTG CCGCAAGGACCGCGTGGTGATCCCGGGCAGCGCGATGAAGCGGGGGAAGT TCTGCGAAGTCCACTGCGACGTCAACGAGCTGGCAGAGAAGGATGCCATG TCTAGTGACGGGGCGTCGAGCGACAAGAAGCGCAGCCGCGCGTGGGCAGC GGACATGGACGACGAGAATATGAGCTCGGAGAGCTCCCAGCGCGGGTCGT CGACCGCCGAATTCGATAACCCATCGGCGAGGTCGTCGGTGAGAGCGAGT ATTCACGACGCAGCGCAAGGGCTAGCGCACCTCGCCATGCTGGCCAGCAG GGAACGAGCCCCGCCGTACGCAGGTGCCGGACCCGGAATTTCCACGCCAC GAGACCGTATAATCCCCGGCGAACGCGCCCCGCTCCGGTTTTCCGGCTAC CCCGGGAGCTTCCACCGCGGGACGGGAAGGATGAAAGCCGACAGAGGTCC TTCTGACGCCGAATTTGGGACGACGAGAATATGAGCTCGGAGAGCTCCCA GCGCGGGTCGTCGACCGCCGAATTCGATAACCCATCGGCGAGGTCGTCGG TGAGAGCGAGTATTCACGACGCAGCGCAAGGGCTAGCGCACCTCGCCATG CTGGCCAGCAGGGAACGAGCCCCGCCGTACGCAGGTGCCGGACCCGGAAT TTCCACGCCACGAGACCGTATAATCCCCGGCGAACGCGCCCCGCTCCGGT TTTCCGGCTACCCCGGGAGCTTCCACCGCGGGACGGGAAGGATGAAAGCC GACAGAGGTCCTTCTGACGCCGAATTTGACTACCCCGCCAAGCTTGGAAG CACGAGATTCTCCCCCTACTCCGAGGGCGAGATCCTCGCCCAACGAGACC CCTACCCGCTCTTCAAGCGGGGTAGGATCCAGCCCGACGAGGATCCTTCC GAGGCCGGGAGACCGAGCGTGTCTCCAGGCCGTCGCGGCGGAGGAGGCAA CATCACCAGCAACGACGCTGTCCCTCCTGTGTCTGCGGCTGCTCAGCGTT TCCGCCTTCGCTATGCGTCCGAGTTCTCGACCTACCCTGGCCCGTGGGAG TTCACCAGGGAGGAGCAGGCCGCGCGCTGGCCAAAAGACCGCCACGTTCC CGGCCCTGAACCGGCGCACGGGTGGGACAGTAGCCATTCCACCGCGTGAA CTACCCCGCCAAGCTTGGAAGCACGAGATTCTCCCCCTACTCCGAGGGCG AGATCCTCGCCCAACGAGACCCCTACCCGCTCTTCAAGCGGGGTAGGATC CAGCCCGACGAGGATCCTTCCGAGGCCGGGAGACCGAGCGTGTCTCCAGG CCGTCGCGGCGGAGGAGGCAACATCACCAGCAACGACGCTGTCCCTCCTG TGTCTGCGGCTGCTCAGCGTTTCCGCCTTCGCTATGCGTCCGAGTTCTCG ACCTACCCTGGCCCGTGGGAGTTCACCAGGGAGGAGCAGGCCGCGCGCTG GCCAAAAGACCGCCACGTTCCCGGCCCTGAACCGGCGCACGGGTGGGACA GTAGCCATTCCACCGCGTGA back to top
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