mRNA_P-fluviatile_contig76.14076.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig76.14076.1 vs. uniprot
Match: D7G5B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B7_ECTSI) HSP 1 Score: 339 bits (869), Expect = 4.410e-97 Identity = 185/333 (55.56%), Postives = 226/333 (67.87%), Query Frame = 1
Query: 1558 PSQRRAKIWAFKCTLA--LAPVTLFFLALGGMQAWPYVQLAANGAWGAVRGFAGKTPRPEMCFLNQGEEATQEICK-GAETADCPVGATCGRGTILQCDLPFEKKGDGTACVLNAEAEEEAKAVVEALRTLTIQELCKGNGLIFRNPEACWKRS-MTLSAAATAQNRTSLSLLAAFPAGNVGGLLELEGEPSLEFGGAEDDVGDKAGSGADRKVSLSKSMHDELLLMPSLRCRARLAAGSWLLAYWPYCLGLYALLLIIGCLDIRRLKSYKQRVQVCTMRDECYQTLLDHAAGDSSPMQVSHIQISVGDKRRARREGSQANVQQKVSELWHLV 2544
P + ++ W FKC + LAPV + L G + AWP+VQ+AA GAWGA RG KTP E CFL GE+ +CK G E DCP ATCG G IL C+LP+ + D ACVL AEAE+EAKAVVEALRTLT +ELCKG GLI P A + S +TL+ AATAQ+R LSLLA P GNV GL+ELEGEP+ FGG +D AGSG +R LS+S HD ++ RC+ARLAAGSW + YW YCL +Y L++ CLD+RR SY + VQVCT+RD CYQTLLDHA+ DSSPMQVSHIQ SV D R R ++A +Q+ ++ LW LV
Sbjct: 291 PRRGKSLEWTFKCAVVVVLAPVVVLLLVSGLLVAWPHVQVAAGGAWGAFRGLTAKTPSVEKCFLQPGEQE-DIVCKSGTEAMDCPDHATCGAGRILHCNLPYTLRKDRAACVLVAEAEKEAKAVVEALRTLTAEELCKGKGLIM--PRASARGSFITLTDAATAQSRGPLSLLAGMPPGNVVGLIELEGEPAQVFGGGQDGAEGCAGSGMERVARLSESAHDAVMRTLGWRCKARLAAGSWFMTYWQYCLAMYCLVVGAVCLDLRRRNSYYRHVQVCTIRDLCYQTLLDHASKDSSPMQVSHIQSSVTDWTRQRVAKNRATIQRHIAGLWPLV 620
BLAST of mRNA_P-fluviatile_contig76.14076.1 vs. uniprot
Match: A0A6H5L750_9PHAE (MSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L750_9PHAE) HSP 1 Score: 336 bits (861), Expect = 1.020e-95 Identity = 184/323 (56.97%), Postives = 220/323 (68.11%), Query Frame = 1
Query: 1582 WAFKCTLALAPVTLFFLALGGMQAWPYVQLAANGAWGAVRGFAGKTPRPEMCFLNQGEEATQEICK-GAETADCPVGATCGRGTILQCDLPFEKKGDGTACVLNAEAEEEAKAVVEALRTLTIQELCKGNGLIFRNPEACWKRS-MTLSAAATAQNRTSLSLLAAFPAGNVGGLLELEGEPSLEFGGAEDDVGDKAGSGADRKVSLSKSMHDELLLMPSLRCRARLAAGSWLLAYWPYCLGLYALLLIIGCLDIRRLKSYKQRVQVCTMRDECYQTLLDHAAGDSSPMQVSHIQISVGDKRRARREGSQANVQQKVSELWHLV 2544
WAFKC + + V L L G + AWP VQ+AA GAWGA RG KTP E CFL GE+ +CK G E DCP ATCG G IL C+LP+ K D ACVL AEAEEEAKAVVEALRTLT +ELCKG GLI P A + S +TL+ AATAQNR LSLLA P GNV GL+ELEGEP+ FGG +D D AGSG +R LS+S HD ++ RC+ARLAAGSW + YW YCL +Y L++ CLD+RR SY + VQVCT+RD CYQTLLD+A+ DSS MQVSHIQ SV D R R ++A + + +++LW LV
Sbjct: 339 WAFKCAVVMVMVLL--LVSGLLVAWPQVQVAAGGAWGAFRGLTAKTPPVEKCFLQLGEQG-DVVCKSGTEATDCPAHATCGAGRILHCNLPYTLKKDRAACVLVAEAEEEAKAVVEALRTLTAEELCKGKGLIM--PRASSRGSFITLTDAATAQNRGPLSLLAGMPPGNVVGLIELEGEPAQVFGGGQDGAEDCAGSGMERVARLSESAHDAVMDTLGWRCKARLAAGSWFMTYWQYCLAMYCLVVGAVCLDLRRRNSYYRHVQVCTIRDVCYQTLLDNASKDSSAMQVSHIQSSVTDWTRQRVAKNRATIHRHIADLWPLV 656 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig76.14076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig76.14076.1 >prot_P-fluviatile_contig76.14076.1 ID=prot_P-fluviatile_contig76.14076.1|Name=mRNA_P-fluviatile_contig76.14076.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=605bp MDLDTSDADMPAPAESKSPSSQAAPRPARSGAAQPPRLQNGKPPPLELDAback to top mRNA from alignment at P-fluviatile_contig76:138857..148232+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig76.14076.1 ID=mRNA_P-fluviatile_contig76.14076.1|Name=mRNA_P-fluviatile_contig76.14076.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9376bp|location=Sequence derived from alignment at P-fluviatile_contig76:138857..148232+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig76:138857..148232+ >mRNA_P-fluviatile_contig76.14076.1 ID=mRNA_P-fluviatile_contig76.14076.1|Name=mRNA_P-fluviatile_contig76.14076.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3630bp|location=Sequence derived from alignment at P-fluviatile_contig76:138857..148232+ (Porterinema fluviatile SAG_2381)back to top |