mRNA_P-fluviatile_contig76.14071.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig76.14071.1
Unique NamemRNA_P-fluviatile_contig76.14071.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig76.14071.1 vs. uniprot
Match: D7G5C3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C3_ECTSI)

HSP 1 Score: 422 bits (1086), Expect = 4.620e-140
Identity = 260/392 (66.33%), Postives = 288/392 (73.47%), Query Frame = 3
Query:  108 MVSLDEDQVRRAATALLKHVNSSAATAKGKPSLMDDEAEVVLAQFSLHRIPHDVSVKPIPIAIPHPLRQQEDCDICLIVKNNAKAWIKDMMEKEPVEGLAKVIKLDKLRTQYKLFKDRRELMSQYDLFLADDRILPMLTQALGKTFLKAKKQPVPISIVRRASLSKQIARARDSAFLVGSFGDCWAVKLATTAMTVDQVVENLMAGIATVVEKIPRKWRNVKAINIKCSSSVALPVYNYVGDVLVQAPKKEEAVAAKAERGEVAXXXXXXXXXXXXXKGKKRIPRPLIRQQLNKIKEEAKAEKXXXXXXXXXXXXXXXXAAPEVGAKXXXXXXXXXXXXLVDAADE-----DSGRQGAGGKVKQKVKSKPESPGVDGGSATKATKRRRTAVA 1268
            MVS DE QVRRAA ALLKHVNSSAA   GK SL++DE EVVLAQ SLH+IP DV  KP+PIAIPHPLR++EDCD+CLIVK+NAK WIK+M EKEPVEGL K+IKLDKLRTQYK FKDRREL+SQ+DLFLADDRILPMLT+ALGKTFLK KKQPVPI + RRAS +KQIARARDSAFLVGS GDCWAVKLA T+MT DQVVENLM G+A VVEKIPRKW+NVKAINIKCS SVALPVY+ +GD+      K+  VA K E    A             + KKR PRPLIRQQLNK+KEEAKAEK                AA    A XXXXXXXXXXXX     +E     DS R+GAG KVK   K K  SP    GSA     RR+T+VA
Sbjct:    1 MVSFDEAQVRRAARALLKHVNSSAA---GKQSLIEDEGEVVLAQISLHKIPGDVKAKPVPIAIPHPLRKREDCDMCLIVKDNAKVWIKEMAEKEPVEGLTKIIKLDKLRTQYKDFKDRRELLSQFDLFLADDRILPMLTKALGKTFLKVKKQPVPIKLERRASFAKQIARARDSAFLVGSHGDCWAVKLANTSMTEDQVVENLMTGVAAVVEKIPRKWKNVKAINIKCSHSVALPVYSNIGDLPPAPSAKKATVAGKEE----AAGEGEGKEPNSHSQAKKRKPRPLIRQQLNKLKEEAKAEK----------------AASTAEAXXXXXXXXXXXXXXXXENEEPNVGGDSAREGAGRKVK---KIKAISPKAASGSAGN---RRKTSVA 363          
BLAST of mRNA_P-fluviatile_contig76.14071.1 vs. uniprot
Match: A0A7S2CVK6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CVK6_9STRA)

HSP 1 Score: 209 bits (531), Expect = 7.130e-58
Identity = 111/250 (44.40%), Postives = 156/250 (62.40%), Query Frame = 3
Query:   75 LPRHHDLSFHTMVSLDEDQVRRAATALLKHVNSSAATAKGKPSLMDDEAEVVLAQFSLHRIPHDVSVKPIPIAIPHPLRQQEDCDICLIVKNNAKAWIKDM-MEKEPVEGLAKVIKLDKLRTQYKLFKDRRELMSQYDLFLADDRILPMLTQALGKTFLKAKKQPVPISIVRRASLSKQIARARDSAFLVGSFGDCWAVKLATTAMTVDQVVENLMAGIATVVEKIPRKWRNVKAINIKCSSSVALPVYN 821
            LP   +       +L+   +  A  ALL      A + +  P   DDE   +L Q +L RIP + S KPI +++PHP+    DC +CL +K   K  +K + ME  PVEGLAK+I LDKLRT Y  F  RREL++ YDLFLAD+RILPML +ALGKTF   KKQP+P+ + R  SL  ++ RARDS  L+   G C AV +  T MT  ++V N++A  ++ +E IPRKW+N++AI +K + S++LP++N
Sbjct:   44 LPEDDETQTTKRDNLNTHTITCAVKALLAFHKKKAESERKLPGA-DDER--ILIQITLQRIPGNSSPKPIQLSVPHPIHGDSDCQMCLFIKKEDKPLVKSLLMEDNPVEGLAKIITLDKLRTSYARFSQRRELLASYDLFLADERILPMLCKALGKTFFSRKKQPIPLCVTRHESLPHRVRRARDSTSLIIPSGTCVAVIVGNTNMTPKELVANIVAAASSAIEHIPRKWKNIQAIQVKTADSMSLPIFN 290          
BLAST of mRNA_P-fluviatile_contig76.14071.1 vs. uniprot
Match: A0A7S2SVD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVD8_9STRA)

HSP 1 Score: 199 bits (506), Expect = 7.420e-55
Identity = 115/224 (51.34%), Postives = 145/224 (64.73%), Query Frame = 3
Query:  222 EVVLAQFSLHRIPHDVSVKPIPIAIPHPLRQQEDCDICLIVKNNAKAWIKDM-MEKEPVEGLAKVIKLDKLRTQYKLFKDRRELMSQYDLFLADDRILPMLTQALGKTFLKAKKQPVPISIVRRASLSKQIARARDSAFLVGSFGDCWAVKLATTAMTVDQVVENLMAGIATVVEKIPRKWRNVKAINIKCSSSVALPVYNYVGDVLVQAPKKEEAVAAKAERG 890
            E V     L ++P   S KPI + + HPL    DCD+CL +K   K W+K++ ME +PV GL KVI LDKLRT Y  F+ RREL+S YDLFLADDRILPML + LGKTF   KKQPVP+ I RR +L + I RARDS +LV   G+  +V +  T+MT  Q+VENL+A     V+ IPRKW NV+AI IK  SSVALPV N +  VL  A ++ +   A+   G
Sbjct:   25 ERVHVTIVLKKVPSKASPKPIRLPLAHPLWSL-DCDMCLFMKTEDKPWVKELLMESKPVPGLKKVITLDKLRTSYARFERRRELISTYDLFLADDRILPMLCKTLGKTFFSRKKQPVPVRI-RRGALPQTIQRARDSTYLVLGGGNNVSVCIGNTSMTRKQLVENLLAATNEAVDHIPRKWANVQAIYIKSDSSVALPVLNKLPFVLAAADQERQQTQAEENSG 246          
BLAST of mRNA_P-fluviatile_contig76.14071.1 vs. uniprot
Match: A0A7S1UKI9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKI9_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.370e-51
Identity = 105/237 (44.30%), Postives = 154/237 (64.98%), Query Frame = 3
Query:  117 LDEDQVRRAATALLKHVNSSAATAKGKPSLMDDEAEVVLAQFSLHRIPHDVSVKPIPIAIPHPLRQ--QEDCDICLIVKNNAKAWIKDMMEKEPVEGLAKVIKLDKLRTQYKLFKDRRELMSQYDLFLADDRILPMLTQALGKTFLKAKKQPVPISIVRR-ASLSKQIARARDSAFLVGSFGDCWAVKLATTAMTVDQVVENLMAGIATVVEKIPRKWRNVKAINIKCSSSVALPVY 818
            LD   V RA  ALL+H++   A  +G+ +L+D E E VL QF+L  +P   S KPI +A+PHP     +    ICLI K  +   +K++    P   + KV+ L  LRT+YK ++ RRELM++++LF+ADDRILPML +ALGK F KAKK P+PI I ++ A +++ +A ARDS +L    G C A+++  T M  D + EN+ A +   V +IP+KWRN+ +I++K ++SVALPVY
Sbjct:    6 LDGPLVARATAALLRHLHEEQAKQRGR-ALLDPEPETVLLQFALKTVPAIASQKPIRLAVPHPFLGFGEGPPRICLICKQESVNAMKELFRAHPDLHVDKVVGLSALRTEYKRYEKRRELMAEFNLFVADDRILPMLAKALGKIFFKAKKHPLPIKINQKGAKVARDVAAARDSTYLHLVQGPCLALRVGHTGMEADAITENIRAVVPAAVSRIPKKWRNILSIHLKTATSVALPVY 241          
BLAST of mRNA_P-fluviatile_contig76.14071.1 vs. uniprot
Match: A0A6G0XX31_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX31_9STRA)

HSP 1 Score: 189 bits (479), Expect = 2.310e-49
Identity = 98/235 (41.70%), Postives = 152/235 (64.68%), Query Frame = 3
Query:  117 LDEDQVRRAATALLKHVNSSAATAKGKPSLMDDEAEVVLAQFSLHRIPHDVSVKPIPIAIPHPLRQQEDCDICLIVKNNAKAWIKDMMEKEPVEGLAKVIKLDKLRTQYKLFKDRRELMSQYDLFLADDRILPMLTQALGKTFLKAKKQPVPISIVRRASLSKQIARARDSAFLVGSFGDCWAVKLATTAMTVDQVVENLMAGIATVVEKIPRKWRNVKAINIKCSSSVALPVYN 821
            LD +QVR+A  AL + +    +    K +L++D  +V+   F+ + +P   S+KP+PIA+P+ +R   D ++CL VK++ K  IK  ++ +P+ GL KV+ + KL+  +  FKD+REL + YDLFLADDRILP L   LGKTF  AKKQP  +++  + ++S  I R      +  S G C+ VK+A   M  ++++EN++ G   +VE +P+KW+N+K+INIK S SVALP+YN
Sbjct:    5 LDAEQVRKAVVALKQFIQKKKSQ-NSKQALVEDN-QVIQIIFTRNTVPAKESLKPVPIALPNNIRG--DGEVCLFVKDSDKDRIKAHLKNDPIPGLTKVMPVKKLKKNFSQFKDKRELKAAYDLFLADDRILPYLKSLLGKTFFDAKKQPTTVNVTGKKNISDHIRRVLAGTEMFVSPGPCFNVKIAHDGMDTEKIIENIIEGTKNIVEHVPKKWKNIKSINIKTSDSVALPIYN 235          
BLAST of mRNA_P-fluviatile_contig76.14071.1 vs. uniprot
Match: A0A507C842_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C842_9FUNG)

HSP 1 Score: 186 bits (471), Expect = 2.410e-49
Identity = 108/263 (41.06%), Postives = 167/263 (63.50%), Query Frame = 3
Query:  117 LDEDQVRRAATALLKHVNSSAATAKG--KPSLMDDEAEVVLAQFSLHRIPHDVSVKPIPIAIPHPLRQQEDCDICLIVKNNAKAWIKDMMEKEPVEGLAKVIKLDKLRTQYKLFKDRRELMSQYDLFLADDRILPMLTQALGKTFLKAKKQPVPISIVRRASLSKQIARARDSAFLVGSFGDCWAVKLATTAMTVDQVVENLMAGIATVVEKIPRKWRNVKAINIKCSSSVALPVYNYVGDVLVQAPKKEEAVAAKAERGEVA 899
            +D+ QV +A+TALL H+   AA+ +   K +L+DD   +V    +   +PH  ++KP  I + HPL   E  +ICLI K+  + + KD++ KE V+ ++KVI + K++ +YK ++ +R L + YDLFLADDRILP+L   LGK F   K+QPVP+ + R  +++K+I +AR S +L  + G C A+K+ TT  T  Q+ EN+M  I +++ KIP +W N+++IN+K S S+ALP+YN + D+       EE V AK  R E A
Sbjct:    1 MDKKQVAKASTALLAHIEKQAASEENPNKNNLLDD-GHIVWLMITTKLVPHQKTLKPTRIPLKHPLLP-ESAEICLITKDPQREF-KDLLAKEGVK-VSKVIGISKVKARYKPYEAKRMLATTYDLFLADDRILPLLPPILGKAFYGKKRQPVPVDLTR--NVAKEIEKARTSTYLHLTRGTCSAIKIGTTNHTASQITENIMHAIPSIIAKIPNQWSNIQSINLKTSESIALPLYNALPDMQ---GIDEETVVAKLAREEAA 254          
BLAST of mRNA_P-fluviatile_contig76.14071.1 vs. uniprot
Match: A0A7S2WN01_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WN01_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.570e-47
Identity = 105/260 (40.38%), Postives = 155/260 (59.62%), Query Frame = 3
Query:   96 SFHTMVSLDEDQVRRAATALLKHVNSSAATAKGKPSLMDDEAEV-VLAQFSLHRIPHDVSVKPIPIAIPHPLRQQ-------------EDCDICLIVKNNAKAWIKDMMEKEPVEG----LAKVIKLDKLRTQYKLFKDRRELMSQYDLFLADDRILPMLTQALGKTFLKAKKQPVPISIVRRASLSKQIARARDSAFLVGSFGDCWAVKLATTAMTVDQVVENLMAGIATVVEKIPRKWRNVKAINIKCSSSVALPVYN 821
            S  T   +D   + +A  ALLKH   + +  K K SL+    ++ V  Q +L R+P + S KPI I IPHP  +              E+ +ICLIVK+  K WIKD+++K   E     + KV+ LD LR ++  F D+R L+ ++D FLADDRILPML++ LGK+F +AKKQP+PI++ R++ L   + +   + ++  S G C  +K   T M V+++ +N+   I+  V KIP+KW NV+AI IK S SVALP+YN
Sbjct:   11 SVPTGAGVDSALLEKAMAALLKHHEDTVSKNKSKKSLLPKGDDIPVQVQLTLSRVPTNPSPKPIRIDIPHPFHKPPSHMEVDETDEYLEEAEICLIVKDEDKEWIKDLVKKVGPESSLSCIKKVLGLDSLRKKHSQFSDKRALLQKFDFFLADDRILPMLSKNLGKSFFRAKKQPIPINVTRKSGLPFAVDKCLKATWMFVSAGTCITIKAGDTGMAVEKLHKNVETIISQAVMKIPKKWANVQAICIKSSQSVALPIYN 270          
BLAST of mRNA_P-fluviatile_contig76.14071.1 vs. uniprot
Match: A0A024G4U6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4U6_9STRA)

HSP 1 Score: 177 bits (450), Expect = 3.530e-47
Identity = 94/234 (40.17%), Postives = 147/234 (62.82%), Query Frame = 3
Query:  117 LDEDQVRRAATALLKHVNSSAATAKGKPSLMDDEAEVVLAQFSLHRIPHDVSVKPIPIAIPHPLRQQEDCDICLIVKNNAKAWIKDMMEKEPVEGLAKVIKLDKLRTQYKLFKDRRELMSQYDLFLADDRILPMLTQALGKTFLKAKKQPVPISIVRRASLSKQIARARDSAFLVGSFGDCWAVKLATTAMTVDQVVENLMAGIATVVEKIPRKWRNVKAINIKCSSSVALPVY 818
            +DE QVR+A  AL  ++         +  + ++++   + Q    +IP   S+KPIPI +PH +R+Q +  +CL+VK+  K  +K +++++PVEGL KV+ L KLR  +  F+DRR L+  YDLFLADDRILP L   +GK F++ KKQPVP+ I  RA+ ++ +       F+  S G C  +++A   M+VDQ+VEN+M G+      I +KW  ++AI++K + SVALP+Y
Sbjct:    9 MDEAQVRKAVIALQIYIEKQKKDRTKQQLIEENQSLSCIIQRK--KIPSKASLKPIPIELPHAIRKQPE--MCLLVKDTDKERVKKILKEDPVEGLTKVMTLKKLRKNFTRFEDRRTLVGAYDLFLADDRILPYLKSPVGKVFIRVKKQPVPVRI-SRANFTQNLRAVEKQTFMFVSCGACMNIRIAHFGMSVDQIVENIMVGMQRCASLIGKKWNGIQAIHLKTNESVALPIY 237          
BLAST of mRNA_P-fluviatile_contig76.14071.1 vs. uniprot
Match: A0A485KZ95_9STRA (Aste57867_13598 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZ95_9STRA)

HSP 1 Score: 180 bits (456), Expect = 7.010e-47
Identity = 97/235 (41.28%), Postives = 147/235 (62.55%), Query Frame = 3
Query:  117 LDEDQVRRAATALLKHVNSSAATAKGKPSLMDDEAEVVLAQFSLHRIPHDVSVKPIPIAIPHPLRQQEDCDICLIVKNNAKAWIKDMMEKEPVEGLAKVIKLDKLRTQYKLFKDRRELMSQYDLFLADDRILPMLTQALGKTFLKAKKQPVPISIVRRASLSKQIARARDSAFLVGSFGDCWAVKLATTAMTVDQVVENLMAGIATVVEKIPRKWRNVKAINIKCSSSVALPVYN 821
            LD DQV +A  AL + +    +    K SL+D++  V+   F+ + +P    +K IPIA+PH +R   D + CL VK++ K  IK  ++++PV GLAKV+ + KL+  +  FKD+REL S Y +FL DDR+LP +   LGKTF   KKQP  +++  + ++S  I R      +  S G C+ VK+A   MT D++VEN++ G   ++  +P+KW+N+K+INIK S SVALP+YN
Sbjct:    5 LDVDQVTKAVVALKQFLKKKQSQ-NSKQSLVDEQ-NVIQVIFTRNTVPPKEQLKAIPIALPHNIRG--DGEACLFVKDSDKERIKTHLKEDPVAGLAKVMPIKKLKKNFSQFKDKRELSSAYGVFLVDDRVLPYVKSLLGKTFFDKKKQPTTVNVSGKKNISDHIRRVLAGTEMFISPGPCFNVKIAHDGMTNDEIVENIVQGTKNILAHVPKKWKNIKSINIKTSDSVALPIYN 235          
BLAST of mRNA_P-fluviatile_contig76.14071.1 vs. uniprot
Match: A4RY79_OSTLU (Uncharacterized protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4RY79_OSTLU)

HSP 1 Score: 176 bits (447), Expect = 7.920e-47
Identity = 103/239 (43.10%), Postives = 147/239 (61.51%), Query Frame = 3
Query:  117 LDEDQVRRAATALLKHVNSSAATAKGKPSLMDDEAEVVLAQFSLHRIPHDV-SVKPIPIAIPHPLRQQEDCDICLIVKNNAKAWIKDMMEKEPVE----GLAKVIKLDKLRTQYKLFKDRRELMSQYDLFLADDRILPMLTQALGKTFLKAKKQPVPISIVRRASLSKQIARARDSAFLVGSFGDCWAVKLATTAMTVDQVVENLMAGIATVVEKIPRKWRNVKAINIKCSSSVALPVY 818
            +D DQVR+A  AL  H+    A+ K + +L +DEAE   A  SL R P +  S + +P+ IPHPL      ++CLIVK++     K+  +K   E    G+AKV+ + KL+  YK  + +R+L   YD+FLADDR+LP+L + LGK F K KKQPV + + ++  ++ QI RA  + +L  S G C  VK+  + M VD++VEN MA I   V KIPR+W N+++I IK   SVALPVY
Sbjct:   38 VDVDQVRKAIEALATHIEK-VASEKPQSALFEDEAETFSALISLRRTPKEATSARLVPVPIPHPLLDLASAELCLIVKDHQGEGHKEA-KKRVAEMAKCGVAKVLGISKLKANYKAHEQKRKLCDSYDMFLADDRVLPLLPKLLGKNFFKKKKQPVAVDLTKKDWVA-QIQRAVGATYLHVSGGTCVNVKVGKSTMEVDEIVENTMAAIEGAVSKIPRRWGNIQSIYIKTPDSVALPVY 273          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig76.14071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5C3_ECTSI4.620e-14066.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2CVK6_9STRA7.130e-5844.40Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SVD8_9STRA7.420e-5551.34Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S1UKI9_9STRA1.370e-5144.30Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6G0XX31_9STRA2.310e-4941.70Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A507C842_9FUNG2.410e-4941.06Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
A0A7S2WN01_9STRA1.570e-4740.38Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A024G4U6_9STRA3.530e-4740.17Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A485KZ95_9STRA7.010e-4741.28Aste57867_13598 protein n=1 Tax=Aphanomyces stella... [more]
A4RY79_OSTLU7.920e-4743.10Uncharacterized protein n=2 Tax=Ostreococcus sp. '... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig76contigP-fluviatile_contig76:110819..113877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score423.3
Seed ortholog evalue1.2e-115
Seed eggNOG ortholog2880.D7G5C3
Preferred nameRSL1D1
KEGG koko:K11824,ko:K14775
KEGG Pathwayko04144,ko04721,ko04961,ko05016,map04144,map04721,map04961,map05016
GOsGO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010941,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032879,GO:0032880,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0042981,GO:0043043,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080134,GO:0080135,GO:0090304,GO:0090342,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000772
EggNOG free text desc.regulation of cellular senescence
EggNOG OGsKOG1685@1,KOG1685@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRibosomal protein L1-like
Ec32 orthologEc-14_006980.1
Exons2
Model size2020
Cds size1164
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig76.14071.1prot_P-fluviatile_contig76.14071.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig76 111568..113770 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817191.7651474-UTR-P-fluviatile_contig76:110818..1115671622817191.7651474-UTR-P-fluviatile_contig76:110818..111567Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 110819..111567 -
1693571456.678447-UTR-P-fluviatile_contig76:110818..1115671693571456.678447-UTR-P-fluviatile_contig76:110818..111567Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 110819..111567 -
1622817191.7990184-UTR-P-fluviatile_contig76:113770..1138771622817191.7990184-UTR-P-fluviatile_contig76:113770..113877Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 113771..113877 -
1693571456.7138948-UTR-P-fluviatile_contig76:113770..1138771693571456.7138948-UTR-P-fluviatile_contig76:113770..113877Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 113771..113877 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817191.777259-CDS-P-fluviatile_contig76:111567..1124281622817191.777259-CDS-P-fluviatile_contig76:111567..112428Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 111568..112428 -
1693571456.6904447-CDS-P-fluviatile_contig76:111567..1124281693571456.6904447-CDS-P-fluviatile_contig76:111567..112428Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 111568..112428 -
1622817191.7879195-CDS-P-fluviatile_contig76:113467..1137701622817191.7879195-CDS-P-fluviatile_contig76:113467..113770Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 113468..113770 -
1693571456.7028048-CDS-P-fluviatile_contig76:113467..1137701693571456.7028048-CDS-P-fluviatile_contig76:113467..113770Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 113468..113770 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig76.14071.1

>prot_P-fluviatile_contig76.14071.1 ID=prot_P-fluviatile_contig76.14071.1|Name=mRNA_P-fluviatile_contig76.14071.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=388bp
MVSLDEDQVRRAATALLKHVNSSAATAKGKPSLMDDEAEVVLAQFSLHRI
PHDVSVKPIPIAIPHPLRQQEDCDICLIVKNNAKAWIKDMMEKEPVEGLA
KVIKLDKLRTQYKLFKDRRELMSQYDLFLADDRILPMLTQALGKTFLKAK
KQPVPISIVRRASLSKQIARARDSAFLVGSFGDCWAVKLATTAMTVDQVV
ENLMAGIATVVEKIPRKWRNVKAINIKCSSSVALPVYNYVGDVLVQAPKK
EEAVAAKAERGEVAAGGSEESGGGAGGKGKKRIPRPLIRQQLNKIKEEAK
AEKAAAAKAAMEAAEAVEAAAPEVGAKKKKKKRAASSEELVDAADEDSGR
QGAGGKVKQKVKSKPESPGVDGGSATKATKRRRTAVA*
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mRNA from alignment at P-fluviatile_contig76:110819..113877-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig76.14071.1 ID=mRNA_P-fluviatile_contig76.14071.1|Name=mRNA_P-fluviatile_contig76.14071.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3059bp|location=Sequence derived from alignment at P-fluviatile_contig76:110819..113877- (Porterinema fluviatile SAG_2381)
CGTAAAGTTATTCCCCTTCCCTCTCCCAAGCGCTGTGGCCCCTTTCCATT GGTCGTGACGGCCTACTGTCCATTCTCCCTCGTCACCACGACCTCTCTTT CCACACCATGGTCAGCCTCGATGAAGATCAAGTGCGACGCGCAGCTACTG CCTTGCTCAAGCACGTCAATAGCTCAGCAGCCACAGCCAAGGGAAAGCCG AGCTTGATGGACGATGAAGCAGAGGTGGTCCTGGCACAATTTTCGCTCCA CAGGATTCCGCACGACGTTTCAGTGAAGCCTATCCCGATCGCCATACCGC ACCCTCTGCGGCAACAAGAGGACTGCGATATATGTCTGATCGTGAAGAAC AACGCCAAGGCTTGGATCAAGGACATGATGGAGAAGGAGCCTGTGGAAGG CCTCGCCAAGGTGCAGTTTGGATGTAGGGCACGGGACTGTGCCGGTCTCT CTCGTGTGGTGGACTCAAAACCTCCAAGGCAGTAGCAGACGTGCGTCGAA CGCCACCCTCGAGTTTTTCCGTTGTATTATAAGTCATGATGACTTGTTGT AGCTGGAATCTGCCCAGCGTTGTGGTAGATTTTTCATAGTGTAAGGCATT TCAATACGGCACCGCCGCTGCTGAATGCTTCGGGTGTGTGAAGTCGGAGC TCGGGCAGCTCACGGCCACTTGCCTTCGTCTTTCCATCCTTGGTTTGGGT TATGACCTTGCCCACACAGAGCTTGATTGTTTCTTTCCCTACAACACGAG AGGAATCAAGTAGTCGACGCCGTGAACCGTCTGCAACACCTGGCTTCGCA TGAAAGACGATGATGTCAGCAATGACACCTATTTTTTGGAAAAAGTTGAT GTACACCTCTACGACTTGCCAACCCCCTCCCATCATCCATATTTGGAGCG AAGGACATGTGTATCAGTTCTAGATAAGCTCACTCTACCGGCACCAACCC GAATGCTAGTTGGCGCATGTTTCGCTTGCTCTGACGAATGCACGCCAAAA TATCTTAGCGATGAAGCGATACTGTGGAGGATCTCACCGCCCTGGCGCTG CCGGACAGCCTCAGGAATGTCGGTCAATGGTCGGTGGCCGACTCCTGAAT CTTCCATGTACAGCCTTGCATATACTCCGGAGTATATTTTTCGGTAGCTT GGGACGACAGCAGCCCCTCGTAACAGGCCGTACAAACGATAATGGTGCCT TTGTTTTTCAAAGAGCGCCCTGCTGAAATCTCCTACCTTGTATCTACGCG CCATTCGGCGGGAGTTCTCATTGTGCCCCTCCATCTGGGCCTTCCAACGC TTTCGTACGCCTCTTCCAGCTCCCAATATTTGCCACGGCAGCTGCAGCAG TTGTATCGATACCGCCTTACCGGCCTAAATTTCACGATACCGCACTACGC TCCCGGACGGATTTCTGCCCCCTTCCGAAACAACGTGTCGTTGTCGCAGG TCATCAAGCTCGACAAGCTCCGCACCCAGTACAAGCTCTTCAAAGATCGG CGGGAGCTGATGTCGCAGTACGACCTTTTCTTGGCAGACGACCGCATCCT GCCCATGCTCACCCAAGCCCTCGGAAAGACCTTCCTCAAGGCCAAGAAGC AGCCCGTGCCGATCAGCATCGTCCGCCGAGCGTCGCTCTCCAAGCAGATC GCCCGCGCGAGAGACAGCGCTTTCTTGGTGGGGTCGTTCGGGGACTGTTG GGCGGTAAAGCTGGCCACCACGGCCATGACGGTGGACCAGGTGGTGGAGA ACCTCATGGCCGGGATCGCGACGGTGGTGGAGAAAATCCCTCGAAAGTGG AGGAACGTGAAGGCGATAAACATCAAGTGTTCCAGCTCGGTGGCGCTTCC GGTCTACAACTACGTCGGCGACGTGCTCGTGCAGGCTCCGAAGAAGGAGG AGGCAGTTGCCGCGAAGGCGGAGAGGGGGGAGGTGGCCGCGGGCGGGAGT GAAGAATCCGGCGGTGGCGCCGGCGGCAAAGGAAAGAAGCGTATACCCCG GCCGCTCATCCGGCAGCAGCTCAACAAAATCAAGGAGGAAGCCAAGGCCG AAAAGGCCGCGGCTGCAAAAGCAGCAATGGAGGCGGCCGAGGCGGTGGAG GCGGCGGCGCCGGAAGTCGGGGCGAAGAAGAAGAAGAAGAAGAGGGCGGC CTCGAGCGAGGAGCTGGTTGACGCGGCGGACGAGGACAGCGGGCGGCAGG GGGCGGGTGGGAAGGTCAAGCAGAAGGTTAAGTCAAAACCCGAGTCTCCC GGAGTGGATGGAGGGAGTGCAACCAAGGCCACCAAGAGGCGAAGGACGGC TGTTGCGTGATGTTGATGATGGTGACATTAGCTCAGCTAGTAATTTGTGC GAATGTGTACGCTCTCTGCCGAGAGGTGACAGCGCGTTTTGACACGGGAA GTTTTTTGTTTGTGTTTTGCCGAGATGTAGAACAAGAAGTGGGGACTGTC GGGTTGTAACTCTTGCACGGCGGGCGCTACCGGTTGAGAGTAATTCCCGT GGCTGAAAGTGACCGTTTCGACATCAACTTGAATGTTGAAATGCCGCTGC CTTTGCCTTAACTTTACCAGTTACCGTTCTTAGCGCGGAGTGAGGGAGGC TCTTTTTGTTTATCAACCCTTGCCCTTACATTTGCGGTTTAGCGTGGTAG CCGACATGGATTGGAGCTATTGCCGTAGGAATTTTCTACGTCCTGCTGTG TTGTACTCCGTCGACGGAATGCCTTCATGGTTCCAACTGCATGGTTCGCC GCCCCTTTCAGCGTCGCGTAGCGTGCATGCCTTCATTACTTTCCCATACC GAGGCTGGTGCAACAGTGCCGCTATCGTCATGAACCGACTTGAACTCTGT CAGACTTCTTACTCCCCAACTTCAGGAAAATACACACTCAGGCCGGGGCG TGGGTCGCTGTGGCCTGCGAAGGGTCGGCAGAGATCGTGGTACATTCTGC GGATGAAGGGAAGAATTATCCCGCCTTGGCAAAAATATTGTCCAGTCTCT CTTACAGTGTTGGAATGACATCACTCTCACAACCTCGCCTCTTGGCATTT TGTTGTCGG
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Coding sequence (CDS) from alignment at P-fluviatile_contig76:110819..113877-

>mRNA_P-fluviatile_contig76.14071.1 ID=mRNA_P-fluviatile_contig76.14071.1|Name=mRNA_P-fluviatile_contig76.14071.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2328bp|location=Sequence derived from alignment at P-fluviatile_contig76:110819..113877- (Porterinema fluviatile SAG_2381)
ATGGTCAGCCTCGATGAAGATCAAGTGCGACGCGCAGCTACTGCCTTGCT
CAAGCACGTCAATAGCTCAGCAGCCACAGCCAAGGGAAAGCCGAGCTTGA
TGGACGATGAAGCAGAGGTGGTCCTGGCACAATTTTCGCTCCACAGGATT
CCGCACGACGTTTCAGTGAAGCCTATCCCGATCGCCATACCGCACCCTCT
GCGGCAACAAGAGGACTGCGATATATGTCTGATCGTGAAGAACAACGCCA
AGGCTTGGATCAAGGACATGATGGAGAAGGAGCCTGTGGAAGGCCTCGCC
AAGATGGTCAGCCTCGATGAAGATCAAGTGCGACGCGCAGCTACTGCCTT
GCTCAAGCACGTCAATAGCTCAGCAGCCACAGCCAAGGGAAAGCCGAGCT
TGATGGACGATGAAGCAGAGGTGGTCCTGGCACAATTTTCGCTCCACAGG
ATTCCGCACGACGTTTCAGTGAAGCCTATCCCGATCGCCATACCGCACCC
TCTGCGGCAACAAGAGGACTGCGATATATGTCTGATCGTGAAGAACAACG
CCAAGGCTTGGATCAAGGACATGATGGAGAAGGAGCCTGTGGAAGGCCTC
GCCAAGGTCATCAAGCTCGACAAGCTCCGCACCCAGTACAAGCTCTTCAA
AGATCGGCGGGAGCTGATGTCGCAGTACGACCTTTTCTTGGCAGACGACC
GCATCCTGCCCATGCTCACCCAAGCCCTCGGAAAGACCTTCCTCAAGGCC
AAGAAGCAGCCCGTGCCGATCAGCATCGTCCGCCGAGCGTCGCTCTCCAA
GCAGATCGCCCGCGCGAGAGACAGCGCTTTCTTGGTGGGGTCGTTCGGGG
ACTGTTGGGCGGTAAAGCTGGCCACCACGGCCATGACGGTGGACCAGGTG
GTGGAGAACCTCATGGCCGGGATCGCGACGGTGGTGGAGAAAATCCCTCG
AAAGTGGAGGAACGTGAAGGCGATAAACATCAAGTGTTCCAGCTCGGTGG
CGCTTCCGGTCTACAACTACGTCGGCGACGTGCTCGTGCAGGCTCCGAAG
AAGGAGGAGGCAGTTGCCGCGAAGGCGGAGAGGGGGGAGGTGGCCGCGGG
CGGGAGTGAAGAATCCGGCGGTGGCGCCGGCGGCAAAGGAAAGAAGCGTA
TACCCCGGCCGCTCATCCGGCAGCAGCTCAACAAAATCAAGGAGGAAGCC
AAGGCCGAAAAGGCCGCGGCTGCAAAAGCAGCAATGGAGGCGGCCGAGGC
GGTGGAGGCGGCGGCGCCGGAAGTCGGGGCGAAGAAGAAGAAGAAGAAGA
GGGCGGCCTCGAGCGAGGAGCTGGTTGACGCGGCGGACGAGGACAGCGGG
CGGCAGGGGGCGGGTGGGAAGGTCAAGCAGAAGGTTAAGTCAAAACCCGA
GTCTCCCGGAGTGGATGGAGGGAGTGCAACCAAGGCCACCAAGAGGCGAA
GGACGGCTGTTGCGTGAGTCATCAAGCTCGACAAGCTCCGCACCCAGTAC
AAGCTCTTCAAAGATCGGCGGGAGCTGATGTCGCAGTACGACCTTTTCTT
GGCAGACGACCGCATCCTGCCCATGCTCACCCAAGCCCTCGGAAAGACCT
TCCTCAAGGCCAAGAAGCAGCCCGTGCCGATCAGCATCGTCCGCCGAGCG
TCGCTCTCCAAGCAGATCGCCCGCGCGAGAGACAGCGCTTTCTTGGTGGG
GTCGTTCGGGGACTGTTGGGCGGTAAAGCTGGCCACCACGGCCATGACGG
TGGACCAGGTGGTGGAGAACCTCATGGCCGGGATCGCGACGGTGGTGGAG
AAAATCCCTCGAAAGTGGAGGAACGTGAAGGCGATAAACATCAAGTGTTC
CAGCTCGGTGGCGCTTCCGGTCTACAACTACGTCGGCGACGTGCTCGTGC
AGGCTCCGAAGAAGGAGGAGGCAGTTGCCGCGAAGGCGGAGAGGGGGGAG
GTGGCCGCGGGCGGGAGTGAAGAATCCGGCGGTGGCGCCGGCGGCAAAGG
AAAGAAGCGTATACCCCGGCCGCTCATCCGGCAGCAGCTCAACAAAATCA
AGGAGGAAGCCAAGGCCGAAAAGGCCGCGGCTGCAAAAGCAGCAATGGAG
GCGGCCGAGGCGGTGGAGGCGGCGGCGCCGGAAGTCGGGGCGAAGAAGAA
GAAGAAGAAGAGGGCGGCCTCGAGCGAGGAGCTGGTTGACGCGGCGGACG
AGGACAGCGGGCGGCAGGGGGCGGGTGGGAAGGTCAAGCAGAAGGTTAAG
TCAAAACCCGAGTCTCCCGGAGTGGATGGAGGGAGTGCAACCAAGGCCAC
CAAGAGGCGAAGGACGGCTGTTGCGTGA
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