mRNA_P-fluviatile_contig75.14017.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig75.14017.1 vs. uniprot
Match: A0A6H5KYL2_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYL2_9PHAE) HSP 1 Score: 1917 bits (4966), Expect = 0.000e+0 Identity = 1428/2697 (52.95%), Postives = 1639/2697 (60.77%), Query Frame = 2
Query: 167 VASRNT-VWDELVLSLDDIFPILKSAEGIPVVKHTKKGQGDSRRLRLDMDEYTLEVFRQSTTASFLNRKMSTRTYNLRMLQE----------VGPAITVPGGHGSKAAATPGRTIIFVFSNRNLYVTVETRDICAALVALFRPGGMASCSG--------------------------------------------------GXXXXXPGRXGAGSRGVERPRRASENATLVRR-VEQQSKTIASSERHFGGPDVVGYGTGSKAAPGRPRTRVGGEQRAAGSRAGKAGGGRPREGRLRRSASATAVAGRRGMFDVEEGPPSTVTSSSDEEGLTPAAAGSSP---------ERSQLS-SESPDEVMRSRMVGFGSADLGMDDVKPKRGGR----LRWGSRFSDPSEKRG-RPAAAAAGXXXXXXXXXXVAALEVKPSAPRLKVIQLDLEDKAIDAKEDAGAASASPVVERRRDVFELNGSPVTASPRFRRGSGAEPPRSPLAVRAEDRLNLESLRRPASAPAGVMASCGAKGPRPLATAAATAAAQD-APSAQRRV--RSRTANSTPPARHGSTSPPLSRGRASXXLXXXXXXXXXXXXXXXSNSL----VLKNQGEYGFEFLRRPXXXXXXXXXXGREDATAVADETSAAM-------------------------------ERQK--PSPRRLSPDP-----QPPQQAEAVDTELVAT----------------AXXXXNNGAHAAAV------VDRRSGGEGEKAPQERKRFIQIQ-----SASSDSLEVEERNH----RYADRLLNFGGSASYSEDEYASG--GPRSDDEAP----PALA-----GNSRILHVGPGAR------GRTRQRSLEKVDNAGARAMPGQKTE--IATPSHAPRDLPFPDETNGSAAEDAELDRDAGGRTGAGAAVAAAAAVFEDGATTRRESFATSTTDSFGPSSTTAGSEQAVSKLTIQTALSIDEYSAPSEAGTSVRCDSTRLPFAPTPGAATTAXXXXXXXXXXXXFNNSRSSRSSRGSYDRVGSGTTDSPGSPPGGAVGEMRASPPHPALPVGAARAVPMLSGLHL-GGASRDDRDQGPSGFEELWAVLEPAWDINASFGASFAPKVMLLGAIYEKLRSFQAAVARVCVRACGPVLGEVCRRCGRVWSVLVSTSIQDMVECNDVLRKVQAGVDQLIDVVERYEACAVVRRFTLPLIGVGTAWEELLASGEGGDLQEPCTRIEEAIAQLPRNAGEGNDHGGGG--------------GSKAGRQGIGSTDLRLPPCPSLWAKGEFDRLTPNRLDDIRALLHEPARFAELAELVTRAGDDGPADQECSPAWDCVRRVEGPTLGRELRRALSATLVAAGQLLPLPRVPPPPPAYVPRHKLTEQITATILHPFLPLGIAGIEGASGSGKTVLAAAVVRDAAVRCRFGDRVFWLHAGRGASHRLVSVLQDLADTVYAWLTDANHAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDQVSGDAGGVTAVDPNLREPVRFRDQDQAVNYVADLCRGPLLAGLRCLVVLDDVHEREVVDALWKSGCQLLVTSPVEGLLQTVGAEATLAAPMGSEFAETVAMLAAGEEIACEEARQLVDLCRGYPLALAMSGALAQAVLGGGNDVREFRKSGVATSTAT-GEAAAAAARGGDRGVTGLVIGKSWSLSTLAAPVGAWVEQVVVGANASPPP------------REKRRPA-TAPEENEQANGDAATAAT----------AAVAPRRNPQATAWATLKRRVDGALASLPHRRMLL-GLLAEAGPKPEMPVRELVAVLTEASLALEEADRILGGYGWAIECYLSFALLPEGLPLPPPALEDFWRSGEGQGGGEGXXXNNRYPNGXXXXSAFAGPSHRRPPGPVEVFEALRLLGRAGGGEGADGLVVHQLQRTVIASKAEENPDVMQKMVRRRAQMLSRISSLVGTFDDDCWGLRREGGAEAGMGIGSTATRSGGDVDVVDVIPFGLLGSRRPGPPSHGYGGFSRYDFLVASWDALPPPHTLTAAAAKYASGVRAACQAATVAAAATQNGXXXXXXXXXXXXXXXXXXXXXXXXXX---RALASAADLQALAGRRAAALPVYGEACALLAAEAARAAKLAGVPQKEQAARDSHHKVASMMQELAMLAAQFGRDAPAIRLLQRSVEIHLSALEASGVLVPTFAGGNEHRSRLDMSDAEALASVAAANEEARGRGAGITYLAVISDPRPIAARLWLPSSEETRLAASGKGGGGXXXXXXXXXXXXXXXGNLPAFGRLDVVSTCVGDLGLVLACTRALRLEKKVDESVQLAEKVYPVLKEILGADHAFTRTALAAFVGQGIVDECWSQPGLGGGDAGGRQPTLPSPTSRRRLARRYGGRGGRPASAVMGGGGAILDMTGSSLG-ASTPSDLSVPPSPLPEEFYARYSSFVNSSGNTGQGSHGDRGGVVTGGGXXXXXXXXRXXRSNSGFSL---NGSMSSGTDEDSDRGSGGLGT-RRAGFLGGSAAAAYSSRLSFPRRALNGSRMAHGWRMEGGQGWGMSETAAAVAGAGASGNFGAAAGGRVTPEVASSRMQQEFYFQHRTRRARAHAFLITAATRARLKNANRDEAGLFLRDLGRLAGANSGWNVGG------GSSGSGSQESASPDGAAQMARLTRR 7579
+A+RNT V DELVLSLDDI P+LK+ +GIPVVKH+ +GQ D RRLRLD D+ TLEVFRQST A + NRK TR YNLR L+E VGPA +VPG G +AA+ PGRT++FVFSNR LYVTVETR++CAALVALFRP G A +G G GR GAG+R RPRRASENA RR +E S++ S + G+ + + + G R GG G GR EG L RS S T A + DV+ TSSSDEE PAA +P +RS S SESPD ++RSRMVGFGS D+ K KR G+ + +RFSD SE+RG PAAA A X V+A +KP A RLK L +E KA + KEDAG A ++ + + + P G G P PLAVR EDRL ESLRRPASAP GV+A+ + P A QD AP+ R +SR NS+PP RH SPPL RGR + XXXXXXXX L+N+ F RRP ++ A T AA+ +++K P R L+ DP Q QQ D VA + +G AV R G G A +R + + S+S DSLEV+E H R+ DR + S S+SE++ +G G RS AP P+ + G S + G G + GR R R E+ G + +++ +ATPSH LP DE + S + +D GG TG A A+ + R ESF TS TDSFGP S+++V KLTIQ ALS D Y+APSEAGT++ CDS LPFAPTP A XXXXXXXXXXXX SPGSPPGGAVGE RAS LP RA+P +SGLHL GGA RD+ QGPSGFEELWAVLEP WDIN+SFGAS APK MLLG +YEKLRSFQAAV+ VCVRACGPVLGEVCRRC R W+VL+S+S+QD+V+C D++R +++ V QLIDVVERY A AVVRRFTLPLIG TAW E+ A GEGGDLQEPC RIE+AI +L GEG S+ G +G S DL+LPPCPS WAKG+FD+LTPNRL D+ LLHEPARFAELAELVT A D GPA ++ S AW+CVRR EGP LGRELRRALSATLVAAG+L PLPRVPPPPPAYVPR KLTEQI ATILHPFLPLGIAGI G SGSGKTVLAAAVVRDA VR RFGDRVFWLHAG+GA HRLVSVLQ LADTVYAWLTD HA GDAG A DPNLREPVRFRDQDQAVNYVADLCRGPLLAG RCLVV+DDVHEREVVDALWKSGCQLLVTSPV+GLLQ VGAEAT+A P+G E A +A AAGE CEE +LVDLCRG PLALAMSGA+ QAV GG+D RE+R G+AT +T GE AA +WS STLAAPVGAWVEQVVVG + SPP ++KRRPA T PEE+ + A P+ATAWA L RRVD ALA L R L GLLAEAGP+ E+PVR+LVAVLTE LAL+EADRILGG GWA+ECYLSFALLPEG PLPPPALE+FWRSG QG EGXXX XXXXS A +H P PVEVFEALR++ RAGGGEGADGLV+H LQR V++ A +P+ MQK RRRA+ LSRISSLVGTFDD CWGLR GA+ G G S S G V D IP GLLGS RPGPP HGYGGFSRYD+LVASWDALP P++LT+A A Y S VRAA +AA XXXXXXXXXXXXXXXXXXXXXXXXX RALASAAD+ ALAG+ + A+ VY EAC LLA EAARAA GV QKE+AAR+SHHKVASM++E+AMLAAQF R+APAIRLLQR+VE+HLSALEASGVLVP FAGGNEHRS+L +A + A+GRGA +TY AV+ D RP+ +RLWL TR A+ XXXXXXXXXXXXXXX NLPAFGRLDVV TCVGDLGLVLACTR LR E KVDES QLAEKVYPVLKEILGADHAFT+ ALAAFVGQGIVD+CW + + G + G P+LPSPTSRRRLAR GGRG A+T SDLS+PPSPLPEEFYARYSS VNS+ + RG G XXXXXXX XX SNSG S +G LG RRAG +GG A Y S LSFPRR LNG R HGWRMEG GWG ETAAA + +++GG + SSRMQ++ YF+HRTRRARAHAFLITAATRARLKNA+RDEAGLFLRDLGR AGA N G +G +ASPDG QM RLTRR
Sbjct: 1 MAARNTPVRDELVLSLDDILPVLKNGDGIPVVKHSNRGQSDQRRLRLDTDDSTLEVFRQSTNAYYFNRK--TRAYNLRNLEEALGYGSRSRGVGPATSVPGAQGGRAAS-PGRTLVFVFSNRTLYVTVETREVCAALVALFRPAGSALPNGSRGGQQQHQGGAVTAAQVGGEDRDTASSASATAAADLAVRNRFHLSPGGDGPSMWGGGRAGAGARAGARPRRASENAASARRALEHHSRSARSVSGTGDARNTNGHPSNMRRSRGVVRGETGGSNGIRGRT------GRRSEGVLMRSVSDTLGAE---LLDVD----GVSTSSSDEERDGPAALARTPVGSSFDGSQQRSPKSTSESPDAIVRSRMVGFGSTDV----RKSKRAGKGSSIIPTWARFSDSSERRGPSPAAAPAAAXATP-----VSASALKP-ASRLKNTGLAIEGKA-NVKEDAGEAVSAEGLRHKSSSSD----PXXXXXXXLYGGGHGSPSGPLAVRKEDRLTAESLRRPASAPGGVLATDAKESPL---------AFQDPAPAQPSRASSKSRPLNSSPPERHERASPPLGRGRVNAPQLLPPAGAXXXXXXXXXXXXXXXGALQNEA---CAFSRRPELSPTVA-----RNSNTTAPATPAAVLSPPXXXXXXXXXXXXXXXKGAVPTFEPRIVDKRKIPPLARPLATDPPLLQRQQQQQHGTPDAAAVAQKRFEAIYRDSSYDSSESPPLSTSGREVLAVPRRAEAAPRNGGARGAGAGALERRGVPAKQRFSRSSSVDSLEVDESYHPRHPRHTDRPMYVRSSTSFSEEDVVAGVGGRRSSAGAPAHPGPSASRGVQEGQSAVNKAGRGTQEQETVAGR-RPRQAEEDAAVGVATLVSRRSPETVATPSHTSSSLPLLDERHPSV-----VIKDMGGGTGGVAGERASGGMMTT--VDRLESFGTSRTDSFGP----PNSDKSVGKLTIQPALSPDVYAAPSEAGTTMTCDSGSLPFAPTPAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXSPGSPPGGAVGEARASI---YLPTAGVRAIPAMSGLHLSGGAPRDEAAQGPSGFEELWAVLEPTWDINSSFGASNAPKAMLLGGVYEKLRSFQAAVSSVCVRACGPVLGEVCRRCARAWAVLISSSVQDIVKCTDLVR-IESSVLQLIDVVERYRASAVVRRFTLPLIGEETAWTEIFAGGEGGDLQEPCARIEKAIVELSEKEGEGGKRSXXXXXXXXXXXXXXXXXSSRPGLRGSFSMDLKLPPCPSYWAKGQFDQLTPNRLADVVTLLHEPARFAELAELVTHASDVGPASRDYSAAWNCVRRAEGPALGRELRRALSATLVAAGEL-PLPRVPPPPPAYVPRKKLTEQIEATILHPFLPLGIAGIGGPSGSGKTVLAAAVVRDATVRRRFGDRVFWLHAGKGADHRLVSVLQSLADTVYAWLTDGEHAGVASSSALPRRSVGSGGG------------------------GGDAGAALA-DPNLREPVRFRDQDQAVNYVADLCRGPLLAGFRCLVVVDDVHEREVVDALWKSGCQLLVTSPVKGLLQAVGAEATVARPLGMEVARQLATRAAGEVALCEEGGRLVDLCRGCPLALAMSGAITQAVFSGGSDAREYRNPGLATPRSTIGEDTAAGXX--XXXXXXXEEPSTWSFSTLAAPVGAWVEQVVVGTSGSPPTNRQRQGGDAPSSKDKRRPAATGPEEDVRGVACAGXXXXXXXXXXXXXXTVPGHELGPEATAWANLARRVDAALARLGQSRSALCGLLAEAGPEQELPVRQLVAVLTE--LALQEADRILGGSGWAVECYLSFALLPEGHPLPPPALEEFWRSG--QGDEEGXXXXXXXXXXXXXXSFAA--AHNLP-SPVEVFEALRMVCRAGGGEGADGLVLHGLQRPVVSCLALRHPEAMQKAARRRARTLSRISSLVGTFDDACWGLR---GADTGTGGASGGDDSSGGEGVADAIPSGLLGSGRPGPPHHGYGGFSRYDYLVASWDALPAPYSLTSAVAGYVSSVRAAYRAAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAAARALASAADMLALAGQLSRAIAVYEEACGLLAEEAARAAGAVGVSQKERAARESHHKVASMLREVAMLAAQFEREAPAIRLLQRAVEMHLSALEASGVLVPHFAGGNEHRSKLKADGGDAAVAXXXXXXXAQGRGADVTYRAVVDDARPLCSRLWLQFPVGTRERAASXX---XXXXXXXXXXXXXXXXNLPAFGRLDVVGTCVGDLGLVLACTRVLRQEGKVDESAQLAEKVYPVLKEILGADHAFTKAALAAFVGQGIVDQCWKEADVHGSGSSGGHPSLPSPTSRRRLARSSGGRGXXXXXXXXXXXXXXXXXXXXXXXXATTLSDLSLPPSPLPEEFYARYSSSVNSAKS-------GRGDAPAVGHGXXXXXXXXXXXSNSGSSXXVTSGXXXXXXXXXXXXXXXPLGVHRRAGPVGGGA---YGS-LSFPRRVLNGGRQEHGWRMEGAHGWGQGETAAAAS---------SSSGG-----LQSSRMQKDIYFRHRTRRARAHAFLITAATRARLKNADRDEAGLFLRDLGRQAGATLSSNXXXXXXXXHGVAGL----AASPDGTPQMPRLTRR 2559
BLAST of mRNA_P-fluviatile_contig75.14017.1 vs. uniprot
Match: D7FH19_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH19_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 1.030e-9 Identity = 81/286 (28.32%), Postives = 117/286 (40.91%), Query Frame = 2
Query: 3740 GQLLPLPRVPPP-PPAYVPRHKLTEQITATILHPFLPLGIAG-IEGASGSGKTVLAAAVVRDAAVRCRFGDRVFWLHAGRGASHRLVSVLQDLADTVYAWLTDANHAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDQVSGDAGGVTAVDPNLREPVRFRDQDQAVNYVADLCRGPLLAGLRCLVVLDDVHEREVVDALWKSGCQLLVTSPVEGLLQTVGAEA-TLAAPMGSEFAETVAMLAAGEE--IACEEARQLVDLCRGYPLALAMSGALAQ 4582
G L +PR P P YV R + E++ + HP + G G GKT++A++VVRD VR RF +FW+ GR + +L+ LA + TD + P RF ++A+ +++ +C GLRCLVVLD+V EVV+A +G +LVT+ ++ V A T M E A V A+ + + EEARQ+ C PLAL M GALA+
Sbjct: 230 GALAEIPREAPVLPTTYVQRTAMLEEVVDDLTHPHRSASATHCLLGMGGGGKTLIASSVVRDDRVRARFKRGIFWVPVGREGKD-VALLLEHLAVELSRVPTDTPRSCPN---------------------------------------------------------RFSGAEEALRHLSSVCAED---GLRCLVVLDNVWNVEVVNAFASTGFHVLVTTRQRAVISAVHAGVWTEVGDMSEEDALEVLSKASQADGPLPAEEARQVALDCGMLPLALGMIGALAK 454
BLAST of mRNA_P-fluviatile_contig75.14017.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 1.310e-6 Identity = 76/273 (27.84%), Postives = 109/273 (39.93%), Query Frame = 2
Query: 3776 PPAYVPRHKLTEQITATILHPFLPLGIAGIEGASGSGKTVLAAAVVRDAAVRCRFGDRVFWLHAGRGASHRLVSVLQDLADTVYAWLTDANHAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDQVSGDAGGVTAVDPNLREPVRFRDQDQAVNYVADLCRGPLLAGLRCLVVLDDVHEREVVDALWKSGCQLLVTSPVEGLLQTVGAEATLAAPMGSEFAETVAMLAA-----GEEIACEEARQLVDLCRGYPLALAMSGALA 4579
P +YV R + E + ++ P P + G G GKT+L +AVVR + VR F VFW+ GR A + L+S+LQ LA + A TD H P ++ E + Q A VA P L VVLDDV EREVVDAL G ++LVT+ ++ G L E E + + G E+ + + +V LC PL LA++G+++
Sbjct: 12 PQSYVERAAVQE-VADGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVP----------------------------------------------------HVLESLEQVKQHLAT--VASAGTSPRL------VVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTKVVV-LCGHLPLVLAIAGSMS 222
BLAST of mRNA_P-fluviatile_contig75.14017.1 vs. uniprot
Match: D8LRB0_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB0_ECTSI) HSP 1 Score: 65.9 bits (159), Expect = 1.610e-6 Identity = 82/302 (27.15%), Postives = 124/302 (41.06%), Query Frame = 2
Query: 3767 PPP------PPAYVPRHKLTEQITATIL---HPFLPLGIAGIEGASGSGKTVLAAAVVRDAAVRCRFGDRVFWLHAGRGASHRLVSVLQDLADTVYAWLTDANHAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDQVSGDAGGVTAVDPNLREPVRFRDQDQAVNYVADLCRGPLLA-GLRCLVVLDDVHEREVVDALWKSGCQLLVTSPVEGLLQTVGAEATLAAPMGSEFA--------------------ETVAMLAAGEEIACEEARQLVDLCRGYPLALAMSGALAQ 4582
PPP PP ++PR + E++ A +L P+ P + I G G+GKTVL++AV R + VR F D +FWL AG+ A+ RL +L+ LA + L+ ++++ G D + + + + VA L GL CL+V+DD+ +RE +D + G ++VT+ +GLL T A LAA +GSE ETV A + E + ++ LCR P AL M G Q
Sbjct: 533 PPPVLCPELPPHHLPRTAMQERVAAGLLGRVSPWDPPMV--ITGPPGAGKTVLSSAVARRSDVRRHFRDGIFWLPAGKDATERLPWLLEYLAVQLSLVLSSGQAGESKA-----------------------------------NRMAALTGRGAKQDDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLLWTQQG-AGLAATLGSEVVAVDRMDDDECKLLLQRCSMIETVDWAALRDT---EPVKSIIKLCRYGPHALVMVGTTLQ 793
BLAST of mRNA_P-fluviatile_contig75.14017.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 4.350e-6 Identity = 89/327 (27.22%), Postives = 130/327 (39.76%), Query Frame = 2
Query: 3647 CSPAWDCVRRVEGPTLGRELRRALSATLV--AAGQLLP-----LPRVPPPPPA-----YVPRHKLTEQITATILHPFLPLGIAGIEGASGSGKTVLAAAVVRDAAVRCRFGDRVFWLHAGRGASHRLVSVLQDLADTVYAWLTDANHAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDQVSGDAGGVTAVDPNLREPVRFRDQDQAVNYVADLCRGPLLAGLRCLVVLDDVHEREVVDALWKSGCQLLVTSPVEGLLQTVGAEATLAAPMGSEFAETVAMLAAGE-----EIACEEARQLVDLCRGYPLALAMSGAL 4576
CS + ++++G + ++RR L A A G +LP + +VP A YV R + ++ I +P P + G G GK+VLA+AVVR ++VR F +FWL GRGA RL+ +LQ L + A TD H P +QV G V + + R LVVLDDV EREVVDAL G ++LVT+ ++ V M E A + + +G + ++V LC PL LA++G+L
Sbjct: 95 CSRHKELEKQLQG--IDGDVRRVLDAISAKGATGTVLPPSLPDMAKVPAEAVALSDSLYVERAAV-RKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSL-------------------------------EQVQRHLGAVASTGTSPR-----------------------------LVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVG-VPTRCLELGDMTEEEALELLLKTSGTVGRPGDSVRTVMTKVVTLCGRLPLVLAIAGSL 357
BLAST of mRNA_P-fluviatile_contig75.14017.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI) HSP 1 Score: 61.2 bits (147), Expect = 4.000e-5 Identity = 78/277 (28.16%), Postives = 111/277 (40.07%), Query Frame = 2
Query: 3782 AYVPRHKLTEQITATILHPFLPLGIAGIEGASGSGKTVLAAAVVRDAAVRCRFGDRVFWLHAGRGASHRLVSVLQDLADTVYAWLTDANHAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDQVSGDAGGVTAVDPNLREPVRFRDQDQAVNYVADLCRGPLLAGLRCLVVLDDVHEREVVDALWKSGCQLLVTSPVEGLLQTVGAEATLAAPMGSEFAE----TVAMLAAGEEIACEEARQLVDLCRGYPLALAMSGALAQAVLGGG 4600
+YV R + E + + +P P + G G GK+VLA+AVVR +VR F + W+ GRGA + L+ +LQ LA V A TDA H P A+D Q + VA P L VVLDDV EREVVDA G +LL+T+ ++ L E E T + G+++ + + +V LC PL LA++G+++ AV G G
Sbjct: 58 SYVERAAVQE-VADGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPH-----------------------------------------------ALDS-------LEQVQQHLAAVASTRNSPRL------VVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTVDPGDDVRMKMTK-VVALCGHLPLVLAIAGSMS-AVKGKG 271
BLAST of mRNA_P-fluviatile_contig75.14017.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 60.8 bits (146), Expect = 5.120e-5 Identity = 65/244 (26.64%), Postives = 94/244 (38.52%), Query Frame = 2
Query: 3863 IEGASGSGKTVLAAAVVRDAAVRCRFGDRVFWLHAGRGASHRLVSVLQDLADTVYAWLTDANHAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDQVSGDAGGVTAVDPNLREPVRFRDQDQAVNYVADLCRGPLLAGLRCLVVLDDVHEREVVDALWKSGCQLLVTSPVEGLLQTVGAEATLAAPMGSEFAETVAMLAA-----GEEIACEEARQLVDLCRGYPLALAMSGALA 4579
+ G G GK+VLA+A VR +VR F +FW+ GRGA L+++LQ LA V A TDA H P R Q + VA P L VVLDDV EREVVDA G ++L+T+ ++ L E E + + G+++ + + +V LC PL LA++G+++
Sbjct: 299 VVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLD------------------------------------------------------RLEQVQQHLAAVASTGTSPRL------VVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTK-VVALCGHLPLVLAIAGSMS 481 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig75.14017.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig75.14017.1 >prot_P-fluviatile_contig75.14017.1 ID=prot_P-fluviatile_contig75.14017.1|Name=mRNA_P-fluviatile_contig75.14017.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=2478bp MASRNTVASRNTVWDELVLSLDDIFPILKSAEGIPVVKHTKKGQGDSRRLback to top mRNA from alignment at P-fluviatile_contig75:193832..206925+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig75.14017.1 ID=mRNA_P-fluviatile_contig75.14017.1|Name=mRNA_P-fluviatile_contig75.14017.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=13094bp|location=Sequence derived from alignment at P-fluviatile_contig75:193832..206925+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig75:193832..206925+ >mRNA_P-fluviatile_contig75.14017.1 ID=mRNA_P-fluviatile_contig75.14017.1|Name=mRNA_P-fluviatile_contig75.14017.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=14868bp|location=Sequence derived from alignment at P-fluviatile_contig75:193832..206925+ (Porterinema fluviatile SAG_2381)back to top |