prot_P-fluviatile_contig12.1320.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1320.1
Unique Nameprot_P-fluviatile_contig12.1320.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length207
Homology
BLAST of mRNA_P-fluviatile_contig12.1320.1 vs. uniprot
Match: Q8QNF3_ESV1K (EsV-1-126 n=2 Tax=root TaxID=1 RepID=Q8QNF3_ESV1K)

HSP 1 Score: 285 bits (729), Expect = 2.520e-95
Identity = 132/195 (67.69%), Postives = 159/195 (81.54%), Query Frame = 0
Query:    6 PQLFFDVETTGLPPRSAKPSEFTKFDGCRVVSIAWILRDRDMVYSQRYAVSDPGIPDETIGAESIHGISREIVDKYGSPIENIIHDFMDDVRKSDIIVAHNMDFDQKVVSSELFRMGCEKDARELMDYHSLCTMKSTTNLVKAKNKYGSFKWPRLEELYVFLFGSSFENAHHAMCDVDALVKCYYVLQEKYNKNK 200
            P+LFFDVETTGLPPR A P  F ++D CRVVSIAW+LRD   VYSQRY+V+DPGI DE IGAE +HGISRE++D+YG+  + ++ DFM DV +SD IVAHN+DFD+ VVS+ELFRMG   DAR LM + SLCTMKSTTNLV+  N YGS+KWP+LEEL+ FLFG  FENAHHAMCDVDA+VKCY+ L EK+  +K
Sbjct:    2 PELFFDVETTGLPPRKANPETFEQYDSCRVVSIAWVLRDEKTVYSQRYSVTDPGIADENIGAEFVHGISREVMDRYGNATKVVLSDFMADVDRSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLMSFKSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHVFENAHHAMCDVDAMVKCYFTLLEKHTSSK 196          
BLAST of mRNA_P-fluviatile_contig12.1320.1 vs. uniprot
Match: A0A6H5J9I1_9PHAE (Glutaredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9I1_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 4.540e-83
Identity = 124/193 (64.25%), Postives = 154/193 (79.79%), Query Frame = 0
Query:    8 LFFDVETTGLPPRSAKPSEFTKFDGCRVVSIAWILRDRDMVYSQRYAVSDPGIPDETIGAESIHGISREIVDKYGSPIENIIHDFMDDVRKSDIIVAHNMDFDQKVVSSELFRMGCEKDARELMDYHSLCTMKSTTNLVKAKNKYGSFKWPRLEELYVFLFGSSFENAHHAMCDVDALVKCYYVLQEKYNKNK 200
            + F  +TTGLPPR A P  F ++D CRVVSIAW+LRD+  VY+QRY+V+DPGI DE IGAE +HGISRE++DKYG+ I  ++ DFM DV +SD IVAHN+DFD+ VVS+ELFRMG   DAR L+ + SLCTMKSTTNLV+  N   S+KW +LEEL+ FLFG++FENAHHAMCDVDA+VKCY+ L EK+  NK
Sbjct:  426 VVFQCQTTGLPPRKATPETFEQYDSCRVVSIAWVLRDKKTVYAQRYSVADPGIADENIGAEFVHGISREVMDKYGNAINVVLSDFMADVNRSDKIVAHNLDFDRSVVSAELFRMGSSDDARRLLSFKSLCTMKSTTNLVRIPNSCESYKWLKLEELHEFLFGNAFENAHHAMCDVDAMVKCYFTLLEKHTANK 618          
BLAST of mRNA_P-fluviatile_contig12.1320.1 vs. uniprot
Match: A0A7G9ZBR6_9EURY (DNA polymerase III PolC-type n=3 Tax=Methanomicrobia TaxID=224756 RepID=A0A7G9ZBR6_9EURY)

HSP 1 Score: 132 bits (333), Expect = 2.050e-35
Identity = 81/203 (39.90%), Postives = 116/203 (57.14%), Query Frame = 0
Query:    8 LFFDVETTGLPPRSAKPSEFTKFDGC-RVVSIAWILRDRD--MVYSQRYAVSDPG--IPDETIGAESIHGISREIVDKYGSPIENIIHDFMDDVRKSDIIVAHNMDFDQKVVSSELFRMGCEKDARELMDYHSLCTMKSTTNLVKAKNKYGSFKWPRLEELYVFLFGSSFENAHHAMCDVDALVKCYYVLQEK-YNKNKGSVD 204
            LFFD ETTGLP     P   TK +   R+V +AW+L D++  ++    Y +   G  IP +   A ++HGI+ E     G  +E ++H+F D + KS+II+AHNMDFD K+V +E  R G E     L D    CTMK+TT L +    +  +KWP+L EL+  LF   FE+AH A  DV A +KC++ L    + KN+ + D
Sbjct:    3 LFFDTETTGLPKVRGAP--LTKLNNWPRMVQLAWLLYDKNQNLISEADYIIKPEGFTIPAD---ASNVHGITTEKALVSGVHLEAVLHEFSDVIPKSEIIIAHNMDFDDKIVGAEFLRSGVES---ALFDKPRFCTMKTTTELCQIPGPH-RYKWPKLSELHYHLFKKDFEDAHDAAVDVKACMKCFFELMRVGFIKNENNKD 196          
BLAST of mRNA_P-fluviatile_contig12.1320.1 vs. uniprot
Match: A0A7V1BXG7_9BACT (3'-5' exonuclease n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7V1BXG7_9BACT)

HSP 1 Score: 128 bits (322), Expect = 6.930e-34
Identity = 77/191 (40.31%), Postives = 109/191 (57.07%), Query Frame = 0
Query:    8 LFFDVETTGLPPRSAKP-SEFTKFDGCRVVSIAWILRDRD--MVYSQRYAVSDPGIPDETIGAES--IHGISREIVDKYGSPIENIIHDFMDDVRKSDIIVAHNMDFDQKVVSSELFRMGCEKDARELMDYHSLCTMKSTTNLVKAKNKYGSFKWPRLEELYVFLFGSSFENAHHAMCDVDALVKCYYVLQ 193
            LFFD ETTGLP     P S+   +   R+V IAW+  D     +  + Y +   G    TI AE+  +HGIS E  +K G  ++ ++ +F   +  S  +VAHNMDFD+K+V +E  R   EK   +L +   LCTMKSTT+  K    YG+ KWP+L EL++ LFG+ F  AH A  D+ A  KC++ L+
Sbjct:    3 LFFDTETTGLPRNWKSPVSDLDNWP--RLVQIAWLQYDSKGKKILEKNYIIKPDGF---TIPAEASKVHGISTERANKEGVELKMVLEEFAGLINGSSSLVAHNMDFDEKIVGAEFLR---EKIKNKLFELERLCTMKSTTDFCKLPGPYGN-KWPKLSELHIKLFGTDFNEAHDASVDITACAKCFWELK 184          
BLAST of mRNA_P-fluviatile_contig12.1320.1 vs. uniprot
Match: A0A1F5TNP1_9BACT (DNA polymerase III subunit epsilon n=1 Tax=Candidatus Falkowbacteria bacterium RIFOXYD2_FULL_34_120 TaxID=1798007 RepID=A0A1F5TNP1_9BACT)

HSP 1 Score: 128 bits (322), Expect = 7.130e-34
Identity = 69/192 (35.94%), Postives = 113/192 (58.85%), Query Frame = 0
Query:    8 LFFDVETTGLPPRSAKPSEFTKFDGCRVVSIAWILRDRD--MVYSQRYAVSDPG--IPDETIGAESIHGISREIVDKYGSPIENIIHDFMDDVRKSDIIVAHNMDFDQKVVSSELFRMGCEKDARELMDYHSLCTMKSTTNLVKAKNKYGSFKWPRLEELYVFLFGSSFENAHHAMCDVDALVKCYYVLQEK 195
            LFFD ETTGLP R   P   T  +  R+V +AWI+ D D   +  +   +   G  IP +      IHGI+ EI +K G  ++  + +F+  +++S+I+VAHN++FD+K++ +ELFR     D     +   +CTM+ +T   + ++  G +KWP+L EL+  LFG  F++AH A  DV A  +C++ L+++
Sbjct:    3 LFFDTETTGLPRRWQAPISDTN-NWPRMVQLAWIVFDNDGKEIMGKNRIIKPEGYIIPADV---SRIHGITTEIAEKEGILLKKALQEFIKGLQRSEIVVAHNINFDEKILGAELFRKQINTD---FFERPQICTMRESTQFCRIRSGRGGYKWPKLTELHQILFGEDFDDAHDAFADVKATARCFFELRKR 187          
BLAST of mRNA_P-fluviatile_contig12.1320.1 vs. uniprot
Match: A0A2H0B964_9BACT (DNA polymerase III subunit epsilon n=1 Tax=Bacteroidetes bacterium CG23_combo_of_CG06-09_8_20_14_all_32_9 TaxID=1973926 RepID=A0A2H0B964_9BACT)

HSP 1 Score: 127 bits (320), Expect = 1.380e-33
Identity = 72/192 (37.50%), Postives = 118/192 (61.46%), Query Frame = 0
Query:    8 LFFDVETTGLPPRSAKP-SEFTKFDGCRVVSIAWILRD--RDMVYSQRYAVSDPG--IPDETIGAESIHGISREIVDKYGSPIENIIHDFMDDVRKSDIIVAHNMDFDQKVVSSELFRMGCEKDARELMDYHSLCTMKSTTNLVKAKNKYGSFKWPRLEELYVFLFGSSFENAHHAMCDVDALVKCYYVLQE 194
            LFFD ETTG+P     P S+   +   R+V IAW++ D  R+ + S+ + +   G  IP E      IHGI+ E   K G  +E +++ F + V K++ I+AHN+ FD+K+V +ELFR   ++   +L +   LCTM+S+ +  +    YG +KWP+L EL++ LFG  F++AH+A+ D++A  KC++ ++E
Sbjct:    3 LFFDTETTGVPKNYKAPVSDINNWP--RMVQIAWLVYDSNRNKIESKEFIIKPEGYTIPKEV---SKIHGITTEKAIKEGQDLEYVLNLFNEQVEKAENIIAHNISFDEKIVGAELFR---KQITSKLFNKSRLCTMRSSRDYCRLPGPYG-YKWPKLSELHIKLFGKDFKDAHNAISDINATAKCFWKMRE 185          
BLAST of mRNA_P-fluviatile_contig12.1320.1 vs. uniprot
Match: A0A847VPR8_9BACT (3'-5' exonuclease n=1 Tax=Candidatus Falkowbacteria bacterium TaxID=2053554 RepID=A0A847VPR8_9BACT)

HSP 1 Score: 127 bits (318), Expect = 2.920e-33
Identity = 73/193 (37.82%), Postives = 111/193 (57.51%), Query Frame = 0
Query:    8 LFFDVETTGLPPRSAKP-SEFTKFDGCRVVSIAWILRDRDMVY--SQRYAVSDPG--IPDETIGAESIHGISREIVDKYGSPIENIIHDFMDDVRKSDIIVAHNMDFDQKVVSSELFRMGCEKDARELMDYHSLCTMKSTTNLVKAKNKYGSFKWPRLEELYVFLFGSSFENAHHAMCDVDALVKCYYVLQEK 195
            L FD ETTGLP     P  +F+ +   R+V +AW L D +  +  S  Y +   G  IP+E      IH I++      G  +   +  F+DDV+K++ +V HN+DFD+K+V SEL R+  E     L+  + +CTMK++  L +  N +G +KWP L ELY FLF +SF +AH A+ DV A  +C++ L+ +
Sbjct:    3 LIFDTETTGLPKNYQAPLDDFSNWP--RIVQLAWSLYDAEGNHWESYNYIIKPNGFVIPEEIA---KIHRITQARALAEGVELRQALEHFIDDVKKAEYLVGHNIDFDEKIVGSELLRLQMENP---LLTANKICTMKASVQLCQIDNGHGGYKWPNLTELYQFLFQTSFPDAHDALVDVKACAECFFELKRR 187          
BLAST of mRNA_P-fluviatile_contig12.1320.1 vs. uniprot
Match: A0A351SMA5_9BACT (3'-5' exonuclease n=1 Tax=Candidatus Falkowbacteria bacterium TaxID=2053554 RepID=A0A351SMA5_9BACT)

HSP 1 Score: 126 bits (317), Expect = 4.010e-33
Identity = 80/193 (41.45%), Postives = 105/193 (54.40%), Query Frame = 0
Query:    8 LFFDVETTGLPPRSAKP-SEFTKFDGCRVVSIAWILRDRDMVY--SQRYAVSDPG--IPDETIGAESIHGISREIVDKYGSPIENIIHDFMDDVRKSDIIVAHNMDFDQKVVSSELFRMGCEKDARELMDYHSLCTMKSTTNLVKAKNKYGSFKWPRLEELYVFLFGSSFENAHHAMCDVDALVKCYYVLQEK 195
            LFFD ETTGLP     P  +F  +   R+V IAW L D D  +  SQ Y +   G  IP E   A  IH IS+E   + G  +   +  F  DV  +  IVAHN+DFD+K+V +EL R   EK   +L     +CTMK+T  +VK     G +KWP L ELY  LF + F  AH A+ DV A  +C++ L+ K
Sbjct:    3 LFFDTETTGLPRNYQAPLDDFLNWP--RIVQIAWSLYDADGHHWESQNYIIKPNGFVIPPE---ATKIHRISQERAVQEGVELRRALEHFSADVASAAYIVAHNIDFDEKIVGAELLR---EKMDNKLPTAEKICTMKTTAGIVKIPKMSGGYKWPNLTELYFHLFRTKFPEAHDAVFDVKACAQCFFELKSK 187          
BLAST of mRNA_P-fluviatile_contig12.1320.1 vs. uniprot
Match: X1M6M6_9ZZZZ (Exonuclease domain-containing protein n=5 Tax=root TaxID=1 RepID=X1M6M6_9ZZZZ)

HSP 1 Score: 126 bits (316), Expect = 6.330e-33
Identity = 72/190 (37.89%), Postives = 109/190 (57.37%), Query Frame = 0
Query:    8 LFFDVETTGLPPRSAKPSEFTKFDGC-RVVSIAWILRD--RDMVYSQRYAVSDPG--IPDETIGAESIHGISREIVDKYGSPIENIIHDFMDDVRKSDIIVAHNMDFDQKVVSSELFRMGCEKDARELMDYHSLCTMKSTTNLVKAKNKYGSFKWPRLEELYVFLFGSSFENAHHAMCDVDALVKCYYVL 192
            LFFD+ETTGLP    + +  T  +   R+V +AW+  D  ++++    Y +   G  IP +   A ++HGI+ E   + G  +E  + +F + + KS+II+AHNMDF++K+V +E  R G +     L D    CTMK+TT L +    YG +KWP+L ELY  LF    E AH +  DV A V+C++ L
Sbjct:    3 LFFDIETTGLP--KVRDASITNLNNWPRIVQLAWLQYDENQNLISEANYIIKPEGFTIPAD---ASNVHGITTEKALESGVQLETALQEFSEVISKSEIIIAHNMDFEEKIVGAEFLRSGVKS---VLFDKQRFCTMKTTTELCQITGPYG-YKWPKLSELYYHLFKKDLEYAHDSAVDVKACVECFFEL 183          
BLAST of mRNA_P-fluviatile_contig12.1320.1 vs. uniprot
Match: A0A3D5X4P8_9BACT (3'-5' exonuclease n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A3D5X4P8_9BACT)

HSP 1 Score: 125 bits (314), Expect = 1.100e-32
Identity = 73/190 (38.42%), Postives = 107/190 (56.32%), Query Frame = 0
Query:    8 LFFDVETTGLPPRSAKPSEFTKFDGC-RVVSIAWILRDRD--MVYSQRYAVSDPGIPDETIGAESIHGISREIVDKYGSPIENIIHDFMDDVRKSDIIVAHNMDFDQKVVSSELFRMGCEKDARELMDYHSLCTMKSTTNLVKAKNKYGSFKWPRLEELYVFLFGSSFENAHHAMCDVDALVKCYYVLQE 194
            LFFD ETTGLP     P   T  D   R++ IAW+L D+D   + S  Y +        T  A  +HGI+ E     G  +E I+  F   V +S++IVAHN+ FD+K++ +EL R   + +  +      LCTM+S+TN  K    YG +KWP+L EL++ LFG  F+ AH A  DV+A  KC++ +++
Sbjct:    3 LFFDTETTGLPRNWKAP--VTDLDNWPRMIQIAWVLCDKDGNRIESNGYIIKPENFEIPT-DASKVHGITTERAINEGEDLETILKKFNALVERSELIVAHNISFDEKILGTELLRKRIQSNFNKK---RKLCTMQSSTNYCKISGPYG-YKWPKLSELHIKLFGEDFDGAHDASADVNATEKCFWEMRK 185          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q8QNF3_ESV1K2.520e-9567.69EsV-1-126 n=2 Tax=root TaxID=1 RepID=Q8QNF3_ESV1K[more]
A0A6H5J9I1_9PHAE4.540e-8364.25Glutaredoxin domain-containing protein n=1 Tax=Ect... [more]
A0A7G9ZBR6_9EURY2.050e-3539.90DNA polymerase III PolC-type n=3 Tax=Methanomicrob... [more]
A0A7V1BXG7_9BACT6.930e-3440.313'-5' exonuclease n=1 Tax=Nitrospirae bacterium Ta... [more]
A0A1F5TNP1_9BACT7.130e-3435.94DNA polymerase III subunit epsilon n=1 Tax=Candida... [more]
A0A2H0B964_9BACT1.380e-3337.50DNA polymerase III subunit epsilon n=1 Tax=Bactero... [more]
A0A847VPR8_9BACT2.920e-3337.823'-5' exonuclease n=1 Tax=Candidatus Falkowbacteri... [more]
A0A351SMA5_9BACT4.010e-3341.453'-5' exonuclease n=1 Tax=Candidatus Falkowbacteri... [more]
X1M6M6_9ZZZZ6.330e-3337.89Exonuclease domain-containing protein n=5 Tax=root... [more]
A0A3D5X4P8_9BACT1.100e-3238.423'-5' exonuclease n=1 Tax=Bacteroidales bacterium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 6..198
e-value: 3.3E-4
score: 20.8
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 9..188
e-value: 5.1E-8
score: 33.6
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 6..203
e-value: 7.0E-29
score: 103.0
NoneNo IPR availablePANTHERPTHR30231:SF24coord: 5..190
NoneNo IPR availablePANTHERPTHR30231DNA POLYMERASE III SUBUNIT EPSILONcoord: 5..190
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 4..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:29963..30583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1320.1mRNA_P-fluviatile_contig12.1320.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 29963..30583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1320.1 ID=prot_P-fluviatile_contig12.1320.1|Name=mRNA_P-fluviatile_contig12.1320.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=207bp
MSTPKPQLFFDVETTGLPPRSAKPSEFTKFDGCRVVSIAWILRDRDMVYS
QRYAVSDPGIPDETIGAESIHGISREIVDKYGSPIENIIHDFMDDVRKSD
IIVAHNMDFDQKVVSSELFRMGCEKDARELMDYHSLCTMKSTTNLVKAKN
KYGSFKWPRLEELYVFLFGSSFENAHHAMCDVDALVKCYYVLQEKYNKNK
GSVDGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf