prot_P-fluviatile_contig72.13902.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig72.13902.1
Unique Nameprot_P-fluviatile_contig72.13902.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length205
Homology
BLAST of mRNA_P-fluviatile_contig72.13902.1 vs. uniprot
Match: D7FZF9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZF9_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 4.310e-72
Identity = 146/204 (71.57%), Postives = 163/204 (79.90%), Query Frame = 0
Query:    1 YGFDPHDDSDYVTINNNHVHHNGWHGIIASKRCXXXXXXXXXXXXXGHITEDGKGTGNGIMLHXXXXXXXXXXXXXXXNMDSGIALYESSHCKVSRNKLYHNKNGIRMSMGSSDNAAFENHIVINGADEKYAIYLYMGNDVPGVDGSDGRPRFNRVYNNTLISDNAVVMMRNADDNTIEDNTIVGLVSRFTDSLNTLWVGNSVP 204
            YGFDPHDDSDYVTI+NN                XXXXXXXXXXXXXGH+T+ GK TGNGIMLHXXXXXXXXXX     NMDSG+A+YESS+C++S+N L  NKNGIRMSMGS++N AFENHIVING DE+YAIYLY GND P V+GSDGRPR NRV++N+L+SDNAVVM RNADDN IE NTI G  SRF DS NTLW GNSVP
Sbjct:  292 YGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKITGNGIMLHXXXXXXXXXXNVVENNMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSANNLAFENHIVINGEDERYAIYLYRGNDTPAVEGSDGRPRNNRVFDNSLMSDNAVVMARNADDNIIEGNTIFGRESRFVDSFNTLWYGNSVP 495          
BLAST of mRNA_P-fluviatile_contig72.13902.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 4.440e-56
Identity = 133/203 (65.52%), Postives = 150/203 (73.89%), Query Frame = 0
Query:    1 YGFDPHDDSDYVTINNNHVHHNGWHGIIASKRCXXXXXXXXXXXXXGHITEDGKGTGNGIMLHXXXXXXXXXXXXXXXNMDSGIALYESSHCKVSRNKLYHNKNGIRMSMGSSDNAAFENHIVINGADEKYAIYLYMGNDVPGVDGSDGRPRFNRVYNNTLISDNAVVMMRNADDNTIEDNTIVGLVSRFTDSLNTLWVGNSV 203
            YGFDPHDDSDY+TI+NN V              XXXXXXXXXXXXXGHI E G+ TGN     XXXXXXXXXXXXXXX MDSG+ALYESS+C VS NK+Y NKNGIRMS+GSSDN  +EN I+ING D KYAIYLY GND+P V  SDGRPR N +++N+L+SDN VV M N+DD   E N + G VSRF DS NTLW  N V
Sbjct:  300 YGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV--SDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFV 500          
BLAST of mRNA_P-fluviatile_contig72.13902.1 vs. uniprot
Match: A0A6H5KBD3_9PHAE (MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD3_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 1.810e-53
Identity = 130/203 (64.04%), Postives = 150/203 (73.89%), Query Frame = 0
Query:    1 YGFDPHDDSDYVTINNNHVHHNGWHGIIASKRCXXXXXXXXXXXXXGHITEDGKGTGNGIMLHXXXXXXXXXXXXXXXNMDSGIALYESSHCKVSRNKLYHNKNGIRMSMGSSDNAAFENHIVINGADEKYAIYLYMGNDVPGVDGSDGRPRFNRVYNNTLISDNAVVMMRNADDNTIEDNTIVGLVSRFTDSLNTLWVGNSV 203
            YGFDPHDDSDY+TI+NN V+             XXXXXXXXXXXXXGHI E G+ TGN     XXXXXXXXXXXXXXX MDSG+ALYESS+C VS NK+Y +KNGIRMS+GSSDN  +EN I+ING D KYAIYLY GND+P V  SDGR R N +++N+L+SDN VV M N+DD   E N + G VSRF +S NTLW  N V
Sbjct:  280 YGFDPHDDSDYLTIHNNEVYXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGSKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV--SDGRLRNNHIFDNSLVSDNQVVKMLNSDDTAFEGNVVYGRVSRFKNSFNTLWKSNFV 480          
BLAST of mRNA_P-fluviatile_contig72.13902.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 1.960e-29
Identity = 81/207 (39.13%), Postives = 109/207 (52.66%), Query Frame = 0
Query:    1 YGFDPHDDSDYVTINNNHVHHNGWHGIIASKRCXXXXXXXXXXXXXGHITEDGKGTGNGIMLHXXXXXXXXXXXXXXXNMDSGIALYESSHCKVSRNKLYHNKNGIRMSMGSSDNAAFENHIVINGADEKYAIYLYMGNDVPGVDGSDGRPRFNRVYNNTLISDNAVVMMRNAD-----DNTIEDNTIVGLVSRFTDSLNTLWVGNS 202
            YGFDPHDDSD++TI++N V++NG+HGIIASKRC             G+    G  T  GI LH               N D+G+A+ ES +  VS N   +NK G+RMS+G +DN   EN I  N    KY  Y Y+G+D P V  S GR + N    N+       + ++ AD     DN  E     GLV RF D++N++  GN+
Sbjct:  288 YGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQ-------GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNS---KYNAYTYLGSDEPDVV-SSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNT 483          
BLAST of mRNA_P-fluviatile_contig72.13902.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 1.190e-26
Identity = 78/207 (37.68%), Postives = 106/207 (51.21%), Query Frame = 0
Query:    1 YGFDPHDDSDYVTINNNHVHHNGWHGIIASKRCXXXXXXXXXXXXXGHITEDGKGTGNGIMLHXXXXXXXXXXXXXXXNMDSGIALYESSHCKVSRNKLYHNKNGIRMSMGSSDNAAFENHIVINGADEKYAIYLYMGNDVPGVDGSDGRPRFNRVYNNTLISDNAVVMMRNAD-----DNTIEDNTIVGLVSRFTDSLNTLWVGNS 202
            YGFDPHDDSD++TI++N V++NG+HGIIASKRC             G+    G  T  GI LH               N D+G+A+ ES +  VS N   +NK G+R S+G +DN  F N+ + N A+  Y  Y Y+G D P V  S GR + N    N+       + ++ AD     DN  E     GLV RF ++   L  GN+
Sbjct:  284 YGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQ-------GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNV-FSNNTISNNAE--YNAYSYLGTDEPDVV-SSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNT 479          
BLAST of mRNA_P-fluviatile_contig72.13902.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 2.910e-26
Identity = 95/206 (46.12%), Postives = 122/206 (59.22%), Query Frame = 0
Query:    1 YGFDPHDDSDYVTINNNHVHHNGWHGIIASKRCXXXXXXXXXXXXXGHITEDGKGTGNGIMLHXXXXXXXXXXXXXXXNMDSGIALYESSHCKVSRNKLYHNKNGIRMSMGSSDNAAFENHIVINGADEKYAIYLYMGNDVPGVDGSDGRPRFNRVYNNTLISDNAVVMMRNAD-----DNTIEDNTIVGLVSRFTDSLNTLWVGN 201
            YGFDPHDDSD++TI++N V+ NG+HGIIASKRC             G+    G  +  GI LH XXXXXXXXXXXXXX  D+G+A+ ES +  VS N   +NK GIR S+GS  N  F N  VI+G+  +Y+ Y Y+G+D P V  S GR + N    N +I     + + +AD     DNT ED T +    RF D+  TL  GN
Sbjct:  281 YGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQ-------GNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNN--VISGS-TRYSTYSYLGSDAPDVVDS-GRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTI----RFNDAKKTLMSGN 471          
BLAST of mRNA_P-fluviatile_contig72.13902.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 9.610e-26
Identity = 86/203 (42.36%), Postives = 114/203 (56.16%), Query Frame = 0
Query:    1 YGFDPHDDSDYVTINNNHVHHNGWHGIIASKRCXXXXXXXXXXXXXGHITEDGKGTGNGIMLHXXXXXXXXXXXXXXXNMDSGIALYESSHCKVSRNKLYHNKNGIRMSMGSSDNAAFENHIVINGADEKYAIYLYMGNDVPGVDGSDGRPRFNRVYNNTLISDNAVVMMRNADDNTIEDNTIVGLVS-RFTDSLNTLWVGNS 202
            YGFDPHDDSD++TI++N V++NG HGIIASKRC  XXXXXX           G     GI LH            XX N D+G+AL ES +  VS NK   NK G+RMS+G +DN   +N  VI+ + E Y +Y Y G+D P V  S GR + N   +NT+   +  + +  AD     DNT     + RF D+ +T+  GN+
Sbjct:  107 YGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXX-------XXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKN--VISDSSE-YNVYTYEGSDDPWVVDS-GRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNT 298          
BLAST of mRNA_P-fluviatile_contig72.13902.1 vs. uniprot
Match: A0A6H5K1D5_9PHAE (MEP4b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D5_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.050e-25
Identity = 73/203 (35.96%), Postives = 106/203 (52.22%), Query Frame = 0
Query:    1 YGFDPHDDSDYVTINNNHVHHNGWHGIIASKRCXXXXXXXXXXXXXGHITEDGKGTGNGIMLHXXXXXXXXXXXXXXXNMDSGIALYESSHCKVSRNKLYHNKNGIRMSMGSSDNAAFENHIVINGADEKYAIYLYMGNDVPGVDGSDGRPRFNRVYNNTLISDNAVVMMRNADDNTIEDNTIV--GLVSRFTDSLNTLWVGN 201
            YG+DPHDDSD++TI++N V+ N WHGIIASKRC             G+I   G  T  GI LH               N D+G+A+ ESS+ ++S N    NK GIRMS+G  DN  + N +       +YAIY Y G+D   V  + GR + N   +NT++     + ++ +D   I +N     G+V  F+++   +  GN
Sbjct:   73 YGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQ-------GNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVYNNTMTNTS---QYAIYTYQGSDPAEVQPT-GRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGVVE-FSNTTENVVTGN 263          
BLAST of mRNA_P-fluviatile_contig72.13902.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 7.270e-25
Identity = 77/205 (37.56%), Postives = 104/205 (50.73%), Query Frame = 0
Query:    1 YGFDPHDDSDYVTINNNHVHHNGWHGIIASKRCXXXXXXXXXXXXXGHITEDGKGTGNGIMLHXXXXXXXXXXXXXXXNMDSGIALYESSHCKVSRNKLYHNKNGIRMSMGSSDNAAFENHIVINGADEKYAIYLYMGNDVPGVDGSDGRPRFNRVYNNTLISDNAV-VMMRNADDNTIEDNTIVGLVS-RFTDSLNTLWVGNSV 203
            YGFDPHDDSDY+TI  N V++N  HGIIASKRC              +   DG     GI LH                 D+GIA+ ES   ++  N +   K GIRMS+GS +N  ++N         +Y +Y Y G+D P V  SDGRP  N +  N L+ D  + V ++  DDN    NT + + +  F +S NT+W GN +
Sbjct:  671 YGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFE-------NEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDIS---QYGLYTYEGSDEPDV--SDGRPSGNVLALN-LVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDI 862          
BLAST of mRNA_P-fluviatile_contig72.13902.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 2.970e-24
Identity = 77/205 (37.56%), Postives = 103/205 (50.24%), Query Frame = 0
Query:    1 YGFDPHDDSDYVTINNNHVHHNGWHGIIASKRCXXXXXXXXXXXXXGHITEDGKGTGNGIMLHXXXXXXXXXXXXXXXNMDSGIALYESSHCKVSRNKLYHNKNGIRMSMGSSDNAAFENHIVINGADEKYAIYLYMGNDVPGVDGSDGRPRFNRVYNNTLISD--NAVVMMRNADDNTIEDNTIVGLVS-RFTDSLNTLWVGNS 202
            YGFDPHDDSD +TI+NN V+ NG HGIIASKRC              +   DG     GI LH                 D+G+A+ ES    +  N   + + GIR+S+GS  N    N  + +G  + Y +Y YMG+D P V  S+GRP  N    NT+ +D  N  V ++  D N   DN   G+ +  F DS +T WV N+
Sbjct:  419 YGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFN-------NEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNN--LFSGITQ-YGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig72.13902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZF9_ECTSI4.310e-7271.57Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FZF8_ECTSI4.440e-5665.52Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KBD3_9PHAE1.810e-5364.04MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FXE4_ECTSI1.960e-2939.13Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI1.190e-2637.68Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
Q7XAJ7_9PHAE2.910e-2646.12Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
Q7XAJ9_9PHAE9.610e-2642.36Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A0A6H5K1D5_9PHAE1.050e-2535.96MEP4b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LC73_ECTSI7.270e-2537.56Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7G8D9_ECTSI2.970e-2437.56Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 9..31
e-value: 1.2
score: 18.1
coord: 89..110
e-value: 580.0
score: 8.9
coord: 173..201
e-value: 1200.0
score: 6.6
coord: 66..88
e-value: 5.9
score: 15.9
coord: 33..64
e-value: 8.8
score: 15.3
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..150
e-value: 2.2E-38
score: 134.1
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 9..183
e-value: 7.3E-16
score: 58.4
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 83..120
e-value: 8.8E-6
score: 23.3
coord: 59..104
e-value: 3.2E-8
score: 31.1
NoneNo IPR availablePANTHERPTHR22990F-BOX ONLY PROTEINcoord: 10..184
NoneNo IPR availablePANTHERPTHR22990:SF15F-BOX ONLY PROTEIN 10coord: 10..184
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 8..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig72contigP-fluviatile_contig72:653473..655341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig72.13902.1mRNA_P-fluviatile_contig72.13902.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig72 653473..655341 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig72.13902.1 ID=prot_P-fluviatile_contig72.13902.1|Name=mRNA_P-fluviatile_contig72.13902.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=205bp
YGFDPHDDSDYVTINNNHVHHNGWHGIIASKRCDHVSIQNNHVHDNGHIT
EDGKGTGNGIMLHRSSDFATIKGNEVHDNMDSGIALYESSHCKVSRNKLY
HNKNGIRMSMGSSDNAAFENHIVINGADEKYAIYLYMGNDVPGVDGSDGR
PRFNRVYNNTLISDNAVVMMRNADDNTIEDNTIVGLVSRFTDSLNTLWVG
NSVPR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR022441Para_beta_helix_rpt-2
IPR011050Pectin_lyase_fold/virulence