prot_P-fluviatile_contig70.13739.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig70.13739.1
Unique Nameprot_P-fluviatile_contig70.13739.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length174
Homology
BLAST of mRNA_P-fluviatile_contig70.13739.1 vs. uniprot
Match: A0A6H5JSR8_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR8_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 1.810e-73
Identity = 123/176 (69.89%), Postives = 140/176 (79.55%), Query Frame = 0
Query:    2 SSLQSSAFFPSRKRRSGDR---VDGLKQEDIKRASIAAGGNDRET-SETYPSAALPSLEVVAGAIAPKDKNSHVQEAIHKEVQYSREGKSKHPVPEKVLAVFGFVKEAFVIPDDFDKDHKFGPLSGVSHEMRVVSAFMAGQLEPRSKEAKLGVKMCVECGNKGHFPRHCPATLLHQ 173
            S++Q SA FP+RKRR   R   VDGLKQ++ KR   AAG   R+  S +  +AALPSL VVAGA APK  NSHVQEAIHKEVQYSREG SK  VP   LAVF FVKEAFVIP++F+KDHKFGPLSGVSHE+RVVSAFMAGQLE R++EAK GVKMC+ECG KGHFPRHCP  LL++
Sbjct:    4 STIQGSAMFPTRKRRQQTRDVVVDGLKQQETKRP-FAAGDKKRDGGSGSLSAAALPSLGVVAGATAPKPSNSHVQEAIHKEVQYSREGNSKGNVPANTLAVFRFVKEAFVIPNNFEKDHKFGPLSGVSHELRVVSAFMAGQLEARTEEAKGGVKMCLECGAKGHFPRHCPLALLYE 178          
BLAST of mRNA_P-fluviatile_contig70.13739.1 vs. uniprot
Match: D7G087_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G087_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 2.440e-33
Identity = 79/121 (65.29%), Postives = 91/121 (75.21%), Query Frame = 0
Query:    2 SSLQSSAFFPSRKRR--SGDRV-DGLKQEDIKRASIAAGGNDRET-SETYPSAALPSLEVVAGAIAPKDK-NSHVQEAIHKEVQYSREGKSKHPVPEKVLAVFGFVKEAFVIPDDFDKDHK 117
            S++Q SA FP+RKRR  +GD V DGLKQ++ KR   A G   R+  S +  +AALPSL VVAGA APK   NSHVQEAIHKEVQYSREGKSK  VP   LAVF FVKEAFVIP++F+KDHK
Sbjct:    4 STIQGSAMFPNRKRRQQTGDVVVDGLKQQETKRP-FANGDKKRDGGSGSVSAAALPSLGVVAGATAPKSSSNSHVQEAIHKEVQYSREGKSKGNVPANTLAVFRFVKEAFVIPNNFEKDHK 123          
BLAST of mRNA_P-fluviatile_contig70.13739.1 vs. uniprot
Match: A0A7R9U4S1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4S1_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.200e-14
Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 0
Query:   63 APKDKNSHVQEAIHKEVQYSREGKSKHPVPEKVLAVFGFVKEAFVIPDDFDKDHKFGPLSGVSHEMRVVSAFMAGQLEPRSKEAKLGVKMCVECGNKGHFPRHCPATL 170
            AP+D + +V   ++  ++Y R G  +    E  +A F  V+  + IP DF+KD K+GP+SG+S E RV++A+   +L P+S +    VK+CV C + GH  R CP  +
Sbjct:   61 APED-DDYVPVHLYANLEYRRRGDKELSATE--IAAFELVETHYEIPKDFEKDSKYGPISGLSFEERVLAAYQQDKLRPKSAK----VKICVACASVGHVKRRCPTLI 161          
BLAST of mRNA_P-fluviatile_contig70.13739.1 vs. uniprot
Match: A0A8K1FH55_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH55_PYTOL)

HSP 1 Score: 68.9 bits (167), Expect = 1.620e-11
Identity = 33/98 (33.67%), Postives = 56/98 (57.14%), Query Frame = 0
Query:   70 HVQEAIHKEVQYSREGKSKHPVPEKVLAVFGFVKEAFVIPDDFDKDHKFGPLSGVSHEMRVVSAFMAGQLEPRSKEAKLGVKMCVECGNKGHFPRHCP 167
            HV   I   V+Y R G++ H VP     +  +++E +VIP DF+++HK+GP SG+++E R++ A+    L+ +  +      +CV C   GH  + CP
Sbjct:   67 HVPRFIFNTVKYVRRGEA-HEVPMTTQKIVDYIREHYVIPIDFEQNHKYGPHSGMTYEERLLRAYKFRLLDLKDSDLAEPEVICVSCAVLGHSDKECP 163          
BLAST of mRNA_P-fluviatile_contig70.13739.1 vs. uniprot
Match: A0A5D6XYE0_9STRA (CCHC-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYE0_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.320e-8
Identity = 46/161 (28.57%), Postives = 79/161 (49.07%), Query Frame = 0
Query:   29 IKRASIAAGGNDRE---TSETYPSAALPSLEVVAGAIAPK----DKNS-------HVQEAIHKE------VQYSREGKSKHPVPEKVLAVFGFVKEAFVIPDDFDKDHKFGPLSGVSHEMRVVSAFMAGQLEPRSKEAKLGVK--MCVECGNKGHFPRHCP 167
            + +   AA G+ +    TS  + + + P+ +    A AP     D+N        HV E I+K       V+Y+R G+ +  V +++L +       + +P DF+++H+FGP SG++ E R+V A++   LEP+    K      +C+ C   GH  R CP
Sbjct:   10 VTKTPTAAEGDAKHKKVTSSPFRAPSPPAAKTKRAASAPTPPVDDENELVDVDGGHVPEFIYKASGTMQVVKYARRGEGER-VSKELLTI-----THYEVPADFERNHRFGPHSGLTFEKRLVRAYLLQLLEPKGPVRKRQAPEIICITCAKLGHSHRECP 164          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig70.13739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JSR8_9PHAE1.810e-7369.89CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G087_ECTSI2.440e-3365.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9U4S1_9STRA1.200e-1437.04Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A8K1FH55_PYTOL1.620e-1133.67Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XYE0_9STRA1.320e-828.57CCHC-type domain-containing protein n=1 Tax=Pythiu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 153..167
score: 9.34
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 138..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig70contigP-fluviatile_contig70:192543..197413 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig70.13739.1mRNA_P-fluviatile_contig70.13739.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig70 191142..197673 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig70.13739.1 ID=prot_P-fluviatile_contig70.13739.1|Name=mRNA_P-fluviatile_contig70.13739.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=174bp
MSSLQSSAFFPSRKRRSGDRVDGLKQEDIKRASIAAGGNDRETSETYPSA
ALPSLEVVAGAIAPKDKNSHVQEAIHKEVQYSREGKSKHPVPEKVLAVFG
FVKEAFVIPDDFDKDHKFGPLSGVSHEMRVVSAFMAGQLEPRSKEAKLGV
KMCVECGNKGHFPRHCPATLLHQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf