prot_P-fluviatile_contig7.13668.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig7.13668.1
Unique Nameprot_P-fluviatile_contig7.13668.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length285
Homology
BLAST of mRNA_P-fluviatile_contig7.13668.1 vs. uniprot
Match: D8LMI8_ECTSI (Similar to neural cell expressed, developmentally down-regulated 4 isoform 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMI8_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 7.370e-21
Identity = 62/136 (45.59%), Postives = 83/136 (61.03%), Query Frame = 0
Query:  116 QSGVPTAQITMPGGVA----VITGLGTGMNFMMKRMTTPPVVEPRTEGHLGMNRFGLTDMGKCESRSLKPAGTEK--QPQTEGFGFAGGKAGGKSFVKDLNKGTNSGLELDGASAPYKVNLKMKR-GGLKFGGKSK 244
            Q G     + MPG  A     +TGLG G++FMMKR+TT PVV+PR +G++G++    T+ G      LK    +K  +P+ E    + G   GK+FVK LNKG NSGL + GA   YKVN+K K+ GGL+FGGK K
Sbjct:  695 QPGARMPMMAMPGAAAGGSPAMTGLGKGLDFMMKRLTTRPVVKPRPQGYVGLDGGSFTNAGGFTEGDLKAPKIQKPKKPKKEEEPSSIGDKAGKAFVKGLNKGINSGLGMVGAGDYYKVNMKKKKKGGLRFGGKVK 830          
BLAST of mRNA_P-fluviatile_contig7.13668.1 vs. uniprot
Match: A0A6H5K7T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7T1_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 9.520e-19
Identity = 60/140 (42.86%), Postives = 79/140 (56.43%), Query Frame = 0
Query:  116 QSGVPTAQITMPGGVA----VITGLGTGMNFMMKRMTTPPVVEPRTEGHLGMNRFGLTDMGKCESRSLK--------PAGTEKQPQTEGFGFAGGKAGGKSFVKDLNKGTNSGLELDGASAPYKVNLKMKRGGLKFGGKS 243
            Q G     + MPG  A    V+T LG G++FMMKRMTT PVV+PR +G++G+N    T++G      LK            E++P + G         G +FVK LNKG NSGL L GA   YKV +  K+GGL+FGGK+
Sbjct:  774 QPGARMPMMAMPGAAAGGSPVMTRLGKGLDFMMKRMTTRPVVKPRPQGYVGLNGGSFTNVGGFTEGDLKVPKIKXXXXXXXEEEPSSIG------DMAGTAFVKGLNKGINSGLGLVGAGDYYKVKMTKKKGGLQFGGKA 907          
BLAST of mRNA_P-fluviatile_contig7.13668.1 vs. uniprot
Match: D8LMG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG8_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 5.280e-9
Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = 0
Query:  128 GGVAVITGLGTGMNFMMKRMTTPPVVEPRTEGHLGMNRFGLTDMGKCESRSLKPAGTEKQPQTEGFGFAGGKAGGKSFVK 207
            GG   +T LG G++FMMKR+TT PVV+PR +G++G++    T++G      LK    +K  + E     G KAG K+FVK
Sbjct:   12 GGSPAMTELGKGLDFMMKRLTTRPVVKPRPQGYVGLDGGSFTNVGGFTEGGLKAPKIQKPKKEEESSSIGDKAG-KAFVK 90          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LMI8_ECTSI7.370e-2145.59Similar to neural cell expressed, developmentally ... [more]
A0A6H5K7T1_9PHAE9.520e-1942.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMG8_ECTSI5.280e-942.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:3276427..3279458 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13668.1mRNA_P-fluviatile_contig7.13668.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig7 3276426..3279458 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig7.13668.1 ID=prot_P-fluviatile_contig7.13668.1|Name=mRNA_P-fluviatile_contig7.13668.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=285bp
TRGSSRSSSSTDEGGRPIRTVASALTGEGNHFYAARGKPHNSARTDRNTT
ESEGTETSDRGRADATTSNTTNTTNTTNTIRSSSRDKERSGLKSDADEQS
LPQQKHQAHRRAIPGQSGVPTAQITMPGGVAVITGLGTGMNFMMKRMTTP
PVVEPRTEGHLGMNRFGLTDMGKCESRSLKPAGTEKQPQTEGFGFAGGKA
GGKSFVKDLNKGTNSGLELDGASAPYKVNLKMKRGGLKFGGKSKDKRNRS
GSGFGSKGREDNEEEEQPEELFELEEERGETEEEV
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