mRNA_P-fluviatile_contig7.13638.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig7.13638.1
Unique NamemRNA_P-fluviatile_contig7.13638.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig7.13638.1 vs. uniprot
Match: D8LMH2_ECTSI (Protein yippee-like n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMH2_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 2.180e-43
Identity = 70/100 (70.00%), Postives = 86/100 (86.00%), Query Frame = 1 
Query: 1093 KVLACATCKTHLSTEGNIKSKDFTTQNGRGYLIANVINVTNGPSDERELRTGLHTCEDVYCVTCDTMVGWEYMWAFEKDQEHKVGKFVLEAVKLMKYHWK 1392
            +V ACA CKTHLSTEGNI+SKDFTTQNGRG+LI  +INVTNGPS +R LRTG+H C+DVYCVTCDT VGW+Y+ AF + + +KVG FVL+AVK++ YHW+
Sbjct:   13 QVFACANCKTHLSTEGNIESKDFTTQNGRGFLINKLINVTNGPSADRSLRTGMHVCQDVYCVTCDTNVGWKYIKAFNQTERYKVGNFVLDAVKVINYHWE 112
[Close]
BLAST of mRNA_P-fluviatile_contig7.13638.1 vs. uniprot
Match: A0A177UVV4_9BASI (Protein yippee-like n=4 Tax=Tilletia TaxID=13289 RepID=A0A177UVV4_9BASI)

HSP 1 Score: 110 bits (274), Expect = 5.350e-25
Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = 1 
Query: 1093 KVLACATCKTHLSTEGNIKSKDFTTQNGRGYLIANVINVTNGPSDERELRTGLHTCEDVYCVTCDTMVGWEYMWAFEKDQEHKVGKFVLEAVKLM 1377
            +V  C  CKTHLST   + SK FT Q+GR YL  +V+N+  G  D+R +RTGLHT  DVYC+ C T+VGW+Y  AF + +++K GKF+LE + L+
Sbjct:   15 RVYGCRKCKTHLSTTDAVMSKQFTGQHGRAYLFESVVNIGLGDPDDRHMRTGLHTVRDVYCIKCQTVVGWKYDHAFVQSEKYKEGKFILEKLLLV 109
[Close]
BLAST of mRNA_P-fluviatile_contig7.13638.1 vs. uniprot
Match: A0A0L0SBD0_ALLM3 (Protein yippee-like n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SBD0_ALLM3)

HSP 1 Score: 109 bits (273), Expect = 8.220e-25
Identity = 45/95 (47.37%), Postives = 67/95 (70.53%), Query Frame = 1 
Query: 1078 PCLHRKVLACATCKTHLSTEGNIKSKDFTTQNGRGYLIANVINVTNGPSDERELRTGLHTCEDVYCVTCDTMVGWEYMWAFEKDQEHKVGKFVLE 1362
            P  + ++  CATC+THLST   I SK F  Q GR +L   V+NV  GP+++R++ TGLHT  D+ C+ C  +VGW+Y +A+E+ Q++KVGK++LE
Sbjct:   12 PDTNNRIYVCATCQTHLSTHSLIISKQFQGQTGRAFLFDKVVNVAEGPAEDRQMTTGLHTVRDIRCIHCGAVVGWKYEYAYEESQKYKVGKYILE 106
[Close]
BLAST of mRNA_P-fluviatile_contig7.13638.1 vs. uniprot
Match: A0A8J4B653_9CHLO (Protein yippee-like n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B653_9CHLO)

HSP 1 Score: 110 bits (275), Expect = 1.760e-24
Identity = 46/96 (47.92%), Postives = 70/96 (72.92%), Query Frame = 1 
Query: 1093 KVLACATCKTHLSTEGNIKSKDFTTQNGRGYLIANVINVTNGPSDERELRTGLHTCEDVYCVTCDTMVGWEYMWAFEKDQEHKVGKFVLEAVKLMK 1380
            ++ +CATC+ H +   +I SK F  ++GR YLI N +NVT GP +ER L TGLHT  D+YC +C+T++GW+Y  AFE+ Q++K GK+++E  K++K
Sbjct:   65 RIYSCATCRAHAADHDDIISKAFQGRHGRAYLINNAVNVTLGPKEERVLITGLHTVADIYCTSCNTVLGWKYEHAFEESQKYKEGKYIIEKAKVLK 160
[Close]
BLAST of mRNA_P-fluviatile_contig7.13638.1 vs. uniprot
Match: A0A7R9U7K2_9STRA (Protein yippee-like n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7K2_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.040e-24
Identity = 45/99 (45.45%), Postives = 64/99 (64.65%), Query Frame = 1 
Query: 1093 KVLACATCKTHLSTEGNIKSKDFTTQNGRGYLIANVINVTNGPSDERELRTGLHTCEDVYCVTCDTMVGWEYMWAFEKDQEHKVGKFVLEAVKLMKYHW 1389
            K+  C+TC THLST   I S+ F  + G+ YL    +NV  GPS+ R L TGLH   D+YC+ C++++GW Y  AF++ Q++K GKF+LE  K+ K  W
Sbjct:   13 KIYCCSTCGTHLSTNDQIISRRFRGRGGQAYLFNRAVNVMTGPSERRVLITGLHVVADIYCIQCESLIGWTYEEAFDRSQKYKEGKFILEKTKITKSEW 111
[Close]
BLAST of mRNA_P-fluviatile_contig7.13638.1 vs. uniprot
Match: A0A433D4Q3_9FUNG (Protein yippee-like n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D4Q3_9FUNG)

HSP 1 Score: 107 bits (267), Expect = 4.490e-24
Identity = 45/92 (48.91%), Postives = 65/92 (70.65%), Query Frame = 1 
Query: 1093 KVLACATCKTHLSTEGNIKSKDFTTQNGRGYLIANVINVTNGPSDERELRTGLHTCEDVYCVTCDTMVGWEYMWAFEKDQEHKVGKFVLEAV 1368
            ++  C  CKTHLST  +I SKDF  + GR YL  +V+NVT+GP + RE+RTGLHT  D++C  C  +VGW+Y+ AF   +++K GK++LE +
Sbjct:   13 RIFGCGKCKTHLSTSEHIMSKDFHGKTGRAYLFEDVVNVTDGPQENREMRTGLHTVVDIHCCHCGFVVGWKYIKAFADREKYKEGKYILEKM 104
[Close]
BLAST of mRNA_P-fluviatile_contig7.13638.1 vs. uniprot
Match: A0A197JXJ1_9FUNG (Protein yippee-like n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JXJ1_9FUNG)

HSP 1 Score: 107 bits (267), Expect = 4.760e-24
Identity = 45/94 (47.87%), Postives = 67/94 (71.28%), Query Frame = 1 
Query: 1093 KVLACATCKTHLSTEGNIKSKDFTTQNGRGYLIANVINVTNGPSDERELRTGLHTCEDVYCVTCDTMVGWEYMWAFEKDQEHKVGKFVLEAVKL 1374
            K+L C  CKTH +T  +I S+ F  Q GR YL +NVINV  G +++R +RTGLHT +D++C  C T+VGW+Y+ A+E+ +++K G+F+LE   L
Sbjct:   13 KILGCNACKTHFATHDHIISRQFHGQFGRAYLFSNVINVYTGEAEDRNMRTGLHTVQDIHCAECATVVGWKYLVAYEQTEQYKEGRFILERTLL 106
[Close]
BLAST of mRNA_P-fluviatile_contig7.13638.1 vs. uniprot
Match: A0A1Y2GNQ2_9FUNG (Protein yippee-like n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GNQ2_9FUNG)

HSP 1 Score: 107 bits (266), Expect = 6.900e-24
Identity = 45/94 (47.87%), Postives = 67/94 (71.28%), Query Frame = 1 
Query: 1093 KVLACATCKTHLSTEGNIKSKDFTTQNGRGYLIANVINVTNGPSDERELRTGLHTCEDVYCVTCDTMVGWEYMWAFEKDQEHKVGKFVLEAVKL 1374
            K+L C +CKTH +T  +I  + F  Q G+ YL +NVINV  G +++R++RTGLHT +D++C  C T+VGW+Y+ A+E DQ +K G+F+LE   L
Sbjct:   16 KILVCNSCKTHFATYDHILDRRFYGQYGKAYLFSNVINVYAGEAEDRKMRTGLHTVQDIHCAECSTVVGWKYLVAYETDQRYKEGRFILERTLL 109
[Close]
BLAST of mRNA_P-fluviatile_contig7.13638.1 vs. uniprot
Match: A0A0D7BHZ2_9AGAR (Protein yippee-like n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7BHZ2_9AGAR)

HSP 1 Score: 106 bits (265), Expect = 8.380e-24
Identity = 44/90 (48.89%), Postives = 65/90 (72.22%), Query Frame = 1 
Query: 1093 KVLACATCKTHLSTEGNIKSKDFTTQNGRGYLIANVINVTNGPSDERELRTGLHTCEDVYCVTCDTMVGWEYMWAFEKDQEHKVGKFVLE 1362
            ++  C+ CKTHL+T  ++ S+ FT Q+GR YL  NV+NV  G  D+R + TG HT  D+YCV C+T +GW+Y+ A+E+ Q++K GKF+LE
Sbjct:   13 RIYGCSGCKTHLATIHSMISRAFTGQHGRAYLFENVVNVVEGEPDDRTMTTGAHTVSDIYCVKCNTTLGWKYIHAYEQSQKYKEGKFILE 102
[Close]
BLAST of mRNA_P-fluviatile_contig7.13638.1 vs. uniprot
Match: A9TAK7_PHYPA (Protein yippee-like n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9TAK7_PHYPA)

HSP 1 Score: 106 bits (264), Expect = 1.450e-23
Identity = 45/99 (45.45%), Postives = 66/99 (66.67%), Query Frame = 1 
Query: 1093 KVLACATCKTHLSTEGNIKSKDFTTQNGRGYLIANVINVTNGPSDERELRTGLHTCEDVYCVTCDTMVGWEYMWAFEKDQEHKVGKFVLEAVKLMKYHW 1389
            ++ +C  C+ H++    I SK F  +NGR YL  NV+NVT G  ++REL TGLHT  D+ C  C  ++GW+Y  AFE+ Q++K GK++LE  K+MK +W
Sbjct:   20 RIYSCCNCRCHVADHDEIISKCFQGRNGRAYLFTNVVNVTLGAKEDRELLTGLHTVADICCFQCQEVLGWKYEKAFEESQKYKEGKYILEKAKVMKENW 118
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMH2_ECTSI2.180e-4370.00Protein yippee-like n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A177UVV4_9BASI5.350e-2550.53Protein yippee-like n=4 Tax=Tilletia TaxID=13289 R... [more]
A0A0L0SBD0_ALLM38.220e-2547.37Protein yippee-like n=2 Tax=Allomyces macrogynus (... [more]
A0A8J4B653_9CHLO1.760e-2447.92Protein yippee-like n=1 Tax=Volvox africanus TaxID... [more]
A0A7R9U7K2_9STRA3.040e-2445.45Protein yippee-like n=1 Tax=Pinguiococcus pyrenoid... [more]
A0A433D4Q3_9FUNG4.490e-2448.91Protein yippee-like n=1 Tax=Jimgerdemannia flammic... [more]
A0A197JXJ1_9FUNG4.760e-2447.87Protein yippee-like n=1 Tax=Linnemannia elongata A... [more]
A0A1Y2GNQ2_9FUNG6.900e-2447.87Protein yippee-like n=1 Tax=Lobosporangium transve... [more]
A0A0D7BHZ2_9AGAR8.380e-2448.89Protein yippee-like n=1 Tax=Cylindrobasidium torre... [more]
A9TAK7_PHYPA1.450e-2345.45Protein yippee-like n=2 Tax=Physcomitrium patens T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:2898701..2902245 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score161.8
Seed ortholog evalue2e-37
Seed eggNOG ortholog2880.D8LMH2
EggNOG free text desc.positive regulation of cellular senescence
EggNOG OGsKOG3399@1,KOG3399@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionYippee/Mis18
Ec32 orthologEc-05_002760.1
Exons5
Model size1969
Cds size360
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817138.1770787-UTR-P-fluviatile_contig7:2898700..28997651622817138.1770787-UTR-P-fluviatile_contig7:2898700..2899765Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 2898701..2899765 +
1693571256.6510918-UTR-P-fluviatile_contig7:2898700..28997651693571256.6510918-UTR-P-fluviatile_contig7:2898700..2899765Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 2898701..2899765 +
1622817138.241135-UTR-P-fluviatile_contig7:2901701..29022451622817138.241135-UTR-P-fluviatile_contig7:2901701..2902245Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 2901702..2902245 +
1693571256.716807-UTR-P-fluviatile_contig7:2901701..29022451693571256.716807-UTR-P-fluviatile_contig7:2901701..2902245Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 2901702..2902245 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817138.1877577-CDS-P-fluviatile_contig7:2899765..28998781622817138.1877577-CDS-P-fluviatile_contig7:2899765..2899878Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2899766..2899878 +
1693571256.661983-CDS-P-fluviatile_contig7:2899765..28998781693571256.661983-CDS-P-fluviatile_contig7:2899765..2899878Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2899766..2899878 +
1622817138.1978185-CDS-P-fluviatile_contig7:2900144..29002121622817138.1978185-CDS-P-fluviatile_contig7:2900144..2900212Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2900145..2900212 +
1693571256.6734803-CDS-P-fluviatile_contig7:2900144..29002121693571256.6734803-CDS-P-fluviatile_contig7:2900144..2900212Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2900145..2900212 +
1622817138.2082949-CDS-P-fluviatile_contig7:2900448..29005101622817138.2082949-CDS-P-fluviatile_contig7:2900448..2900510Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2900449..2900510 +
1693571256.6880438-CDS-P-fluviatile_contig7:2900448..29005101693571256.6880438-CDS-P-fluviatile_contig7:2900448..2900510Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2900449..2900510 +
1622817138.2189913-CDS-P-fluviatile_contig7:2901262..29012951622817138.2189913-CDS-P-fluviatile_contig7:2901262..2901295Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2901263..2901295 +
1693571256.6989553-CDS-P-fluviatile_contig7:2901262..29012951693571256.6989553-CDS-P-fluviatile_contig7:2901262..2901295Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2901263..2901295 +
1622817138.2294254-CDS-P-fluviatile_contig7:2901617..29017011622817138.2294254-CDS-P-fluviatile_contig7:2901617..2901701Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2901618..2901701 +
1693571256.709067-CDS-P-fluviatile_contig7:2901617..29017011693571256.709067-CDS-P-fluviatile_contig7:2901617..2901701Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2901618..2901701 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13638.1prot_P-fluviatile_contig7.13638.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig7 2899766..2901701 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig7.13638.1

>prot_P-fluviatile_contig7.13638.1 ID=prot_P-fluviatile_contig7.13638.1|Name=mRNA_P-fluviatile_contig7.13638.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=120bp
MRACPCLHRKVLACATCKTHLSTEGNIKSKDFTTQNGRGYLIANVINVTN
GPSDERELRTGLHTCEDVYCVTCDTMVGWEYMWAFEKDQEHKVGKFVLEA
VKLMKYHWKGHEKQQSGSV*
back to top

mRNA from alignment at P-fluviatile_contig7:2898701..2902245+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig7.13638.1 ID=mRNA_P-fluviatile_contig7.13638.1|Name=mRNA_P-fluviatile_contig7.13638.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3545bp|location=Sequence derived from alignment at P-fluviatile_contig7:2898701..2902245+ (Porterinema fluviatile SAG_2381)
TTTTTCATTTTTCAAACCAAAAGTCTGTAGCTCGGGAAGCCTAAGCGTCG
ATTTGTCCATATATATCCCAGCATCGTTCCTTGACGTTTGAGCAGGGACT
TTGTATAATAAGTTGAAAATCGAGCGGAGTGATAACTTTTTTGGATCCGA
CCTTTTCGTCTTGACCTTTGTATGGGGATCACAACAATTGCTTCAATTCC
GTGTACTTTGCGTTCTGTCAAGATTATCTCGCCCGAGACGCGATCGTCGA
AAACCTTTGCTCAAATTGCGCCGGACGGACCAAAATCGTCAGGCGCAGAT
ACGAAATACGAGAAGAGTTTCGGCCAGTAGAGGGCACTTGATGCTGGAAT
ATGAACGAACACCAAATTTCAGTTTAAAAGTTCTGGCCGATGAATAAACT
TGACAGAACATTGAGCTCGATTTGGAGCAGCCGGTAAGCCGCGAGCCTCT
CGAAAACAAAGTATGTCCTTCAGTGGGGGCCCGTTCTATGAAGGGGGGGA
GATTTTCAAGAAGCAAAAATAATCCGCAAATATCCAGATATTAATATTCC
ATATGGGAGGTAGCCCTAGCGGCATCCACTCCGCGTTCGCGAAAATGTCT
ATTCAAGTCGCGCCAAACCTGTTGGAGATGAAAAGATAGCATCATCACCG
CGTACAAGAAACAAGACGATGATCCCCAATTCCGCCTTGCTCGGTATTGA
TCATTTCAACGCAGGGGTACCGGAAACGCGTAAGCCGCTATCGGCTTTGT
TTCCTGTGCGTTTTGCCATGGGATTTGATTTGCTTGCGGCCGCGGTTTCG
ACGATCTATCCTTCGGCTTACTTGCGGGAAATTTCCGGCACTCTGCGCTT
TTGTGTCTGCATAATATTGTATGGAAAGGGTCTGTTTGACCCACTTTTCT
TGTCTCTCCTCAGTCGTAGGTGTTTGCACGCGATCGATATATGCTCATGG
AAATTTCATAACTTGTGATGACCTGGTGATTGTGCAGCAGCGTGGGCGAA
AGGGAACGTTGACTTGTGAACCTTGAGTTGCCCACCACCACTTGACCTCT
TCTTTCGTTTTCTGCATGCGCGCATGTCCGTGTCTTCACCGAAAGGTGCT
CGCCTGTGCGACCTGCAAGACTCACTTATCAACAGAGGGGAATATCAAAT
CTAAGGATTTCACCACACAGAACGGGAGGTGGGACTTCGTCGTGCATGCG
TAGCATGTATGGCAAATAGTGGCACATGTTGACATTAGCAATAAAGGAGG
AAACCGTCATTCTGTGACAGACTCGGATTGATTTGCTCTCCGTGTATTCA
TCATCGATCCTCGCACCATAGGTATCGCAAGTCTACCGCTCGCGGCGACA
TCGTAGTTTGACTTGCCATCCGCCCCATTGTCGAGAGGAGTTAATATCGT
GTCAATATCATGTTCAATCTCCTCCATACATCGCCTTGGCGCAGGGGATA
CCTGATTGCGAACGTGATAAACGTCACAAACGGGCCTTCGGACGAGAGGG
AGTTGAGAACGGGTGCGTACGGCTTGTGTCGTCAAGTCCATTCGGGGACA
GCCTACCGTGGCTTTCGAAAACAAAACCGTTTTGATCGATATATTTCGTC
CGTGAAGCGCCACATCGCCCCATGAATGAAGCATCACTTTTAACGAAGAG
CGCCGTCCTCCGCCACACATGATGCTGGCGTTGGGTTGGTGAGGTCTTCA
AGTGGTATCAACTTTCTAAATTGTGTTTCGTTTGTTCTGCAACGCCAGGC
CTGCACACCTGCGAAGATGTCTACTGCGTGACTTGCGACACCATGGTGGG
ATGGGAATATGTGAGAGACCGGAGCCACACGGACCGCAAAATCAGAATTG
CCAACGGTTTGTCTCATTTTGCACGCGATGAGGTCGCAATATGAAAGGAA
AATCGTAAGCCTCATCTCATGTGAGTCAGCTGATGGCAGCACAGATCGAG
CAGATCTCCGAGCTGTATGTCGAATACGTGCGTCGGGCGGCTGATAACCA
TCCAATCCTTGCAATCCTTCCAGCCCGTGCAGGCGGTCGCGTCTTCCCGC
CTCTTCTTTCCAACCTGATCGTGGCTATGTTGCAGCGTATAATGAAAAGT
AAGGTTCAGGCTGTTGTCGAGCGCTTTTCTGCAGCAACCGAACCGCTTGG
ATACCCAAGTGTGCTTTCGCGCACGCTCAATGCCGAGGTTCTTGTTCATG
CGCTGAGGTAGATGGTTGTATATCACGTTAGTCTATGAAATGCGCACTGC
TTTTGCGACTGCCAAGTGCGGAAATATGCGACTCGTAGCAGGCAAGCAAC
GAGAGCCAACAAATATCGGAAGGACGATGCAGGTTTAAAATTAGCTGCTT
CAGAGGCTCTTGTCTGAGCGTATTTGTATTAGACTAATACTGCTTCAATG
CTTGATGCTGGTAATATTCCTTTTCCAGAACATGTAGAAAATTTGGAGGA
AAAGTGAATAAAACTTGTAAAAAGCAACCTAGGCATGCAAAATTTACCCC
CGTGCTGCATTTTCCAACCCCCCCACGCGCACACTTGGAAATGTCCGCCG
TACTGCGAGAAGATGTGGGCATTCGAGAAAGATCAGGAGCACAAGGTAAG
AGAAGGAGCTACGCAAATCACTCGACTAATTGTTTCCGAGTTTCAACCTT
CTCTTCTTTCGTTGGCTGAACTTTAAGATAATCAAATGTGGATGCACATG
CTTCGGAAGCAGTCGCAAGCTCATTTCTCAAACGTGCCCATGCAATGAAG
ATTTTCTTTGCGACACTGAAAAAAACTGTGCACAAACCTACCGCTTGCTT
TTTCACAATGCAAAGCTCGATCTTTCATGCAGCGCATGAGACTTTGCTTC
GATGGCAGCAGTGTGAAGTTTGGTCGATGATCTAACCTTTGTTCACTATG
TTCGGCGCTCGTTACAGGTCGGAAAATTCGTCTTGGAAGCCGTGAAGCTG
ATGAAGTATCACTGGAAGGGCCATGAAAAACAGCAAAGTGGATCCGTGTA
GACGTTGGTGTGTGTTATTTTTTTATTTTCAGCAATATCTGGAGGTTGGC
CGTGTCGAATTCTCTGTTGTACACTTACTGTTTCGCCCCAAAATTTGCAC
CGAAAAGAAAGGCTTGCATCGACGTGGAGCTCATCAGTAGGATTTGGTGG
TTGCTCATAGAATGGCCTCCTCTTCCTCTGAAGAAGATTTGAACGCACGG
GTGCTTTTTTCTGTCAAGCATCAGATCCACAGTTACGACGGCGCTTTGCA
GTAGCTGGTGCATATTTTGTGCTTCAGCAAGAAAGATGTAGTGATTTGGA
CATGGACAGCACTCAATGTCAAATGGAGAAAATTGGCTCATGCCTCTCGG
GCCTCACTCGCATCGAGAATCGATTTAAGTACAGCCAACAAAATAAGTTG
AGGTTCCTTGTTCCGTTTTGGTCGTGTACTTGCCGTTTTTAGTGGAGATG
TTTGCGGAGGAACAGCATTTTCTGCGAACCATGTCGGCTGCTCCGACGTT
CTGAAATCTTTGTGCAACCGCCACACCCCACCCATTAAATGCACC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig7:2898701..2902245+

>mRNA_P-fluviatile_contig7.13638.1 ID=mRNA_P-fluviatile_contig7.13638.1|Name=mRNA_P-fluviatile_contig7.13638.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=720bp|location=Sequence derived from alignment at P-fluviatile_contig7:2898701..2902245+ (Porterinema fluviatile SAG_2381)
ATGCGCGCATGTCCGTGTCTTCACCGAAAGGTGCTCGCCTGTGCGACCTG
CAAGACTCACTTATCAACAGAGGGGAATATCAAATCTAAGGATTTCACCA
CACAGAACGGGAGATGCGCGCATGTCCGTGTCTTCACCGAAAGGTGCTCG
CCTGTGCGACCTGCAAGACTCACTTATCAACAGAGGGGAATATCAAATCT
AAGGATTTCACCACACAGAACGGGAGGGGATACCTGATTGCGAACGTGAT
AAACGTCACAAACGGGCCTTCGGACGAGAGGGAGTTGAGAACGGGGGATA
CCTGATTGCGAACGTGATAAACGTCACAAACGGGCCTTCGGACGAGAGGG
AGTTGAGAACGGGCCTGCACACCTGCGAAGATGTCTACTGCGTGACTTGC
GACACCATGGTGGGATGGGAATATGCCTGCACACCTGCGAAGATGTCTAC
TGCGTGACTTGCGACACCATGGTGGGATGGGAATATATGTGGGCATTCGA
GAAAGATCAGGAGCACAAGATGTGGGCATTCGAGAAAGATCAGGAGCACA
AGGTCGGAAAATTCGTCTTGGAAGCCGTGAAGCTGATGAAGTATCACTGG
AAGGGCCATGAAAAACAGCAAAGTGGATCCGTGTAGGTCGGAAAATTCGT
CTTGGAAGCCGTGAAGCTGATGAAGTATCACTGGAAGGGCCATGAAAAAC
AGCAAAGTGGATCCGTGTAG
back to top