mRNA_P-fluviatile_contig7.13471.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig7.13471.1
Unique NamemRNA_P-fluviatile_contig7.13471.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig7.13471.1 vs. uniprot
Match: A0A6H5L5K6_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K6_9PHAE)

HSP 1 Score: 447 bits (1149), Expect = 3.460e-141
Identity = 273/496 (55.04%), Postives = 308/496 (62.10%), Query Frame = 3 
Query:  843 LDMRGIVRLLGALQSNGFASGIYLHPAMLNHSCRCV-PNAVKWRAGKSIADRQSYQRPRRGRGEDNGSNKREEEECLLSEIRATELITKGEEITISYLEPREIARDSRQSRLKEQFGFHCDCALCE-----RSSGSSXXXXXXXXXXATATLSKSTAALEQLI-----------------------------ERGREKKAAGFAERHDVGNGNVDGGPSTANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGGIVARAILERRLDAAESVIDLSRANEVRWAGVLSEVLGYRWQACQWLSARHISLARADKLIAKACIAILQGEGAIEAAQSDADCTEAVRQASDGLPFSFGGGKRGDKSPPPFQGSFKARLLAVFLSALISRRKTQLLYLGNGPHPETGACLADMSQAMGMLLAQGFEGGKWIERLPGHEIDGDDGGGATTPYEGARGGGGKGEARDGLWWGDGGTSGASLFERECDKAAKRIGRLFDAP 2225
            LD+ GIVRL GALQSNGFASGIYLHPAM NHSCR   PNA+KWRAG+SI+D Q     + G   D    K      LLSEIRATELI  G+EITISYLEPREIA  SRQ+RLK+QFGF+C C LCE     R S S           A+A + +  A LE  +                             E GR K A G     D+G      G   A                                 DRGG+VAR +LERRL+AAESV+DLSRA EV+WAGVLSEVLGYR QA +WLS RHISLARADKLIAKACIAILQG    EAAQSD  C  AV QAS+ LP SFGG +  + + PP +G FK RLLAVF+++LISRRKTQLLYLG+GPHPE GACLAD+SQAM MLL QG EG  WI RLPGH+ DG +     +P E     G +G   +GLWW DGG SGASLFERECDK AKRIGRLFDAP
Sbjct:  226 LDVPGIVRLFGALQSNGFASGIYLHPAMTNHSCRRQRPNAIKWRAGQSISDTQMPVSRKTGVNPDPAGEKG----SLLSEIRATELIRTGQEITISYLEPREIALASRQARLKDQFGFNCSCVLCEGHADHRQSNSEATA-------ASAAVHERVAPLEAFLRQGRPEHQDEIAPPTCQKGGAVCRRNTSGEPGRNKSADGRKGGEDIGEDAFSPGRGGAE-----EGEGREWLGPEDAGHSVGGSGEEDEEEDRGGLVARNVLERRLEAAESVLDLSRAKEVKWAGVLSEVLGYRRQASRWLSGRHISLARADKLIAKACIAILQGS--TEAAQSDVGCAAAVLQASNDLPMSFGGRRGLESTLPPTKGGFKTRLLAVFVASLISRRKTQLLYLGDGPHPEAGACLADLSQAMTMLLGQGSEGETWIGRLPGHDSDGTNDAKVKSPREAKGEVGQEGVVGEGLWWCDGGVSGASLFERECDKVAKRIGRLFDAP 703
[Close]
BLAST of mRNA_P-fluviatile_contig7.13471.1 vs. uniprot
Match: D7FMG1_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG1_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 3.280e-120
Identity = 238/435 (54.71%), Postives = 273/435 (62.76%), Query Frame = 3 
Query:  843 LDMRGIVRLLGALQSNGFASGIYLHPAMLNHSCRCVPNAVKWRAGKSIADRQSYQRPRRGRGEDNGSNKREEEECLLSEIRATELITKGEEITISYLEPREIARDSRQSRLKEQFGFHCDCALCERSSGSSXXXXXXXXXXATATLSKSTAALEQLIERGREKKAAGFAERHD------------VGNGNVDGGPS---TANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD----------------RGGIVARAILERRLDAAESVIDLSRANEVRWAGVLSEVLGYRWQACQWLSARHISLARADKLIAKACIAILQGEGAIEAAQSDADCTEAVRQASDGLPFSFGGGKRGDKSPPPFQGSFKARLLAVFLSALISRRKTQLLYLGNGPHPETGACLADMSQAMGMLLAQGFEGGKWIERLPGHEIDG 2054
            LD+ GIVRL GALQSNGFASGIYLHPAM NHSCR   NA+KWRAG+SI+D Q     ++G       N   E+  LLSEIRATELI  G+EITISYLEPREIA  SRQ+RLK+QFGF C C LCE   G +          A A + +S A LE  + +G  +   G  E  D            V   NV G P    TA+G                               D                RGG+VAR +LERRL+AAESV+DLSRA EV+W GVLSEVLGYR QA +WLS RHISLARADKLIAKACIAILQG    EAAQSD +C EAV Q S+ LP SFGG +  + + PP +G FK RLLAVF+++LISRRKTQLLYLG+GPHPE GACLAD+SQAM MLL QG EG  WI RLPGH+ DG
Sbjct:  215 LDVPGIVRLFGALQSNGFASGIYLHPAMTNHSCRA--NAIKWRAGQSISDTQMPHSKKKGVN----PNPAGEKGSLLSEIRATELIRMGQEITISYLEPREIALASRQARLKDQFGFDCSCVLCE---GHAESRQSNSEAAAAAAVDESFAPLEAFLRQGLRQ---GRPEHQDEVAPPTCQKGVEVCRRNVSGEPGRSKTADGGEGGEGIGGDAFNPGRGGAEEGEGRKWLGLEDGGHSGXXXXXXXXXXXRGGLVARNVLERRLEAAESVVDLSRAKEVKWPGVLSEVLGYRRQASRWLSGRHISLARADKLIAKACIAILQGS--TEAAQSDVECAEAVLQTSNDLPMSFGGRRGLESTLPPTKGGFKTRLLAVFVASLISRRKTQLLYLGDGPHPEAGACLADLSQAMTMLLGQGSEGETWIGRLPGHDSDG 635
[Close]
BLAST of mRNA_P-fluviatile_contig7.13471.1 vs. uniprot
Match: A0A225WSW6_9STRA (SET-domain transcriptional regulator protein, Zn-binding site n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSW6_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 5.140e-13
Identity = 58/159 (36.48%), Postives = 74/159 (46.54%), Query Frame = 3 
Query:  876 ALQSNGFASGIYLHPAMLNHSCRCVPNAVKWRAGKSIADRQSYQRPRRGRGEDNGSNKREEEECLLSEIRATELITKGEEITISYLEPREIARDSRQSRLKEQFGFHCDCALCER-----SSGSSXXXXXXXXXXATATLSKSTAALEQLIERGREKKA 1337
            A+Q N F SG++L+ AM NH C   PN VK+                    ED G       E  +SE+R    I KGE++TISYL PRE +R++RQ  L EQFGF C C LC+R     S   S              L K     E++I+  RE  A
Sbjct:  194 AMQCNAFDSGVFLYNAMFNHDCN--PNCVKFTP------------------EDAGP------EGGVSEVRVARPIAKGEQLTISYLYPREQSRENRQKNLWEQFGFECSCELCKRGDSVLSPPPSAGDDSDSTKPGMPDLEKVLVGAEEIIKTNRESAA 326
[Close]
BLAST of mRNA_P-fluviatile_contig7.13471.1 vs. uniprot
Match: A0A3F2RZL5_9STRA (SET domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RZL5_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 5.210e-13
Identity = 48/115 (41.74%), Postives = 62/115 (53.91%), Query Frame = 3 
Query:  876 ALQSNGFASGIYLHPAMLNHSCRCVPNAVKWRAGKSIADRQSYQRPRRGRGEDNGSNKREEEECLLSEIRATELITKGEEITISYLEPREIARDSRQSRLKEQFGFHCDCALCER 1220
            A+Q N F SG++L  AM NH C   PN VK+    +              G D G          +SE+R    I KGE++TISYL PRE +R++RQ  L+EQFGF C C LC+R
Sbjct:  119 AMQCNAFDSGVFLFNAMFNHDCN--PNCVKFAPEDA--------------GPDGG----------VSEVRVARPIKKGEQLTISYLYPREKSRENRQKNLREQFGFECKCELCKR 207
[Close]
BLAST of mRNA_P-fluviatile_contig7.13471.1 vs. uniprot
Match: A0A1W0A991_9STRA (Homoserine dehydrogenase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A991_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 8.780e-13
Identity = 52/161 (32.30%), Postives = 79/161 (49.07%), Query Frame = 3 
Query:  834 KASLDMRGIVRLLGALQSNGFASGIYLHPAMLNHSCRCVPNAVKWRAGKSIADRQSYQRPRRGRGEDNGSNKREEEECLLSEIRATELITKGEEITISYLEPREIARDSRQSRLKEQFGFHCDCALCERSSGSSXXXXXXXXXXATAT-LSKSTAALEQLI 1313
            K S +    ++++  +Q N F+SG++LH AM NH C   PN +K+    S                             +SE+RA + I KG ++ ISYL PRE +R SRQ +L++QFGF C+C+LC+R    S           +   + K+ A LE+L 
Sbjct:  568 KRSNEFDKWLQVVMGMQCNAFSSGVFLHTAMFNHDCN--PNCIKFTPVASHG---------------------------ISEVRAAQFIPKGTQLMISYLYPREQSRSSRQLQLEKQFGFTCNCSLCQRGDSFSPYPSPTLSSSVSLDDIEKAIATLEELF 699
[Close]
BLAST of mRNA_P-fluviatile_contig7.13471.1 vs. uniprot
Match: A0A6A3MPR3_9STRA (SET domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MPR3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.150e-12
Identity = 57/163 (34.97%), Postives = 75/163 (46.01%), Query Frame = 3 
Query:  876 ALQSNGFASGIYLHPAMLNHSCRCVPNAVKWRAGKSIADRQSYQRPRRGRGEDNGSNKREEEECLLSEIRATELITKGEEITISYLEPREIARDSRQSRLKEQFGFHCDCALCERSSG-----SSXXXXXXXXXXATATLSKSTAALEQLIERGREKKAAGFA 1349
            A+Q N F SG++L+ AM NH C   PN VK+                    ED G       E  +SE+R    I KGE++TISYL PRE +R++RQ  L EQFGF C C LC+R        +S              L K     E++I+   E  AA  +
Sbjct:  196 AMQCNAFDSGVFLYNAMFNHDCN--PNCVKFVP------------------EDAGV------EGGVSEVRVARPIAKGEQLTISYLYPREQSRENRQKNLWEQFGFECSCELCKRGDSVLPPPASATNDNDGTTPEMQDLEKVLVGAEEIIKTNPESAAAALS 332
[Close]
BLAST of mRNA_P-fluviatile_contig7.13471.1 vs. uniprot
Match: D0P411_PHYIT (SET domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=D0P411_PHYIT)

HSP 1 Score: 81.3 bits (199), Expect = 2.850e-12
Identity = 51/133 (38.35%), Postives = 70/133 (52.63%), Query Frame = 3 
Query:  822 RIWLKASLDMRGIVRLLGALQSNGFASGIYLHPAMLNHSCRCVPNAVKWRAGKSIADRQSYQRPRRGRGEDNGSNKREEEECLLSEIRATELITKGEEITISYLEPREIARDSRQSRLKEQFGFHCDCALCER 1220
            R + + +L    +++ + A+Q N F SG++L+ AM NH C   PN VK+                    ED G       E  +SE+R    I KGE++TISYL PRE +R +RQ  L EQFGF C C LC+R
Sbjct:  178 RNFTELALSPDQVLQNVFAMQCNAFDSGVFLYNAMFNHDCN--PNCVKFTP------------------EDAGP------EGGVSEVRVARPIAKGEQLTISYLYPREQSRGNRQKNLSEQFGFECCCELCKR 284
[Close]
BLAST of mRNA_P-fluviatile_contig7.13471.1 vs. uniprot
Match: H3GNT0_PHYRM (SET domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNT0_PHYRM)

HSP 1 Score: 81.3 bits (199), Expect = 2.850e-12
Identity = 50/126 (39.68%), Postives = 66/126 (52.38%), Query Frame = 3 
Query:  843 LDMRGIVRLLGALQSNGFASGIYLHPAMLNHSCRCVPNAVKWRAGKSIADRQSYQRPRRGRGEDNGSNKREEEECLLSEIRATELITKGEEITISYLEPREIARDSRQSRLKEQFGFHCDCALCER 1220
            L    +++ + A+Q N F SG++L+ AM NH C   PN VK+                    ED G       E  +SE+R    I KGE++TISYL PRE +R++RQ  L EQFGF C C LC R
Sbjct:  185 LSHNQVLQNVFAMQCNAFDSGVFLYNAMFNHDCN--PNCVKFTP------------------EDAGP------EGGVSEVRVARPIAKGEQLTISYLYPREQSRENRQQNLWEQFGFKCGCQLCRR 284
[Close]
BLAST of mRNA_P-fluviatile_contig7.13471.1 vs. uniprot
Match: A0A3M6V9K2_9STRA (SET domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V9K2_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.780e-12
Identity = 49/115 (42.61%), Postives = 62/115 (53.91%), Query Frame = 3 
Query:  876 ALQSNGFASGIYLHPAMLNHSCRCVPNAVKWRAGKSIADRQSYQRPRRGRGEDNGSNKREEEECLLSEIRATELITKGEEITISYLEPREIARDSRQSRLKEQFGFHCDCALCER 1220
            A+Q N F SG++L+ AM NH C   PN VK+                    ED G       E  +SE+R    I KGE++TISYL PRE +R++RQ  L EQFGF C C LC+R
Sbjct:  196 AMQCNAFDSGVFLYNAMFNHDCN--PNCVKFTP------------------EDAGP------EGGVSEVRVARPIVKGEQLTISYLYPREQSRENRQKNLWEQFGFVCKCQLCQR 284
[Close]
BLAST of mRNA_P-fluviatile_contig7.13471.1 vs. uniprot
Match: A0A2P4X264_9STRA (Putative SET-domain transcriptional regulator protein, Zn-binding site n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X264_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 4.970e-12
Identity = 48/115 (41.74%), Postives = 62/115 (53.91%), Query Frame = 3 
Query:  876 ALQSNGFASGIYLHPAMLNHSCRCVPNAVKWRAGKSIADRQSYQRPRRGRGEDNGSNKREEEECLLSEIRATELITKGEEITISYLEPREIARDSRQSRLKEQFGFHCDCALCER 1220
            A+Q N F SG++L+ AM NH C   PN VK+                    ED G       E  +SE+R    I KGE++TISYL PRE +R++R+  L EQFGF C C LC+R
Sbjct:  196 AMQCNAFDSGVFLYNAMFNHDCN--PNCVKFTP------------------EDAGP------EGGVSEVRVARPIAKGEQLTISYLYPREQSRENRRKNLWEQFGFECSCELCKR 284
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5L5K6_9PHAE3.460e-14155.04SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FMG1_ECTSI3.280e-12054.71SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A225WSW6_9STRA5.140e-1336.48SET-domain transcriptional regulator protein, Zn-b... [more]
A0A3F2RZL5_9STRA5.210e-1341.74SET domain-containing protein n=3 Tax=Phytophthora... [more]
A0A1W0A991_9STRA8.780e-1332.30Homoserine dehydrogenase n=1 Tax=Thraustotheca cla... [more]
A0A6A3MPR3_9STRA2.150e-1234.97SET domain-containing protein n=4 Tax=Phytophthora... [more]
D0P411_PHYIT2.850e-1238.35SET domain-containing protein n=14 Tax=Phytophthor... [more]
H3GNT0_PHYRM2.850e-1239.68SET domain-containing protein n=1 Tax=Phytophthora... [more]
A0A3M6V9K2_9STRA3.780e-1242.61SET domain-containing protein n=1 Tax=Peronospora ... [more]
A0A2P4X264_9STRA4.970e-1241.74Putative SET-domain transcriptional regulator prot... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:418945..429551 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score394.0
Seed ortholog evalue1.2e-106
Seed eggNOG ortholog2880.D7FMG1
EggNOG free text desc.SET domain
EggNOG OGs29J7Q@1,2RSFT@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSET domain protein
Ec32 orthologEc-05_000850.1
Exons12
Model size2873
Cds size1737
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13471.1prot_P-fluviatile_contig7.13471.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig7 419590..426978 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817115.6518126-UTR-P-fluviatile_contig7:418944..4195891622817115.6518126-UTR-P-fluviatile_contig7:418944..419589Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 418945..419589 -
1693571189.0754664-UTR-P-fluviatile_contig7:418944..4195891693571189.0754664-UTR-P-fluviatile_contig7:418944..419589Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 418945..419589 -
1622817115.7789652-UTR-P-fluviatile_contig7:426978..4270011622817115.7789652-UTR-P-fluviatile_contig7:426978..427001Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 426979..427001 -
1693571189.560017-UTR-P-fluviatile_contig7:426978..4270011693571189.560017-UTR-P-fluviatile_contig7:426978..427001Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 426979..427001 -
1622817115.789473-UTR-P-fluviatile_contig7:428130..4283731622817115.789473-UTR-P-fluviatile_contig7:428130..428373Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 428131..428373 -
1693571189.570121-UTR-P-fluviatile_contig7:428130..4283731693571189.570121-UTR-P-fluviatile_contig7:428130..428373Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 428131..428373 -
1622817115.799953-UTR-P-fluviatile_contig7:429326..4295511622817115.799953-UTR-P-fluviatile_contig7:429326..429551Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 429327..429551 -
1693571189.5806873-UTR-P-fluviatile_contig7:429326..4295511693571189.5806873-UTR-P-fluviatile_contig7:429326..429551Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 429327..429551 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817115.668044-CDS-P-fluviatile_contig7:419589..4198341622817115.668044-CDS-P-fluviatile_contig7:419589..419834Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 419590..419834 -
1693571189.087785-CDS-P-fluviatile_contig7:419589..4198341693571189.087785-CDS-P-fluviatile_contig7:419589..419834Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 419590..419834 -
1622817115.6779706-CDS-P-fluviatile_contig7:420191..4202671622817115.6779706-CDS-P-fluviatile_contig7:420191..420267Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 420192..420267 -
1693571189.4220362-CDS-P-fluviatile_contig7:420191..4202671693571189.4220362-CDS-P-fluviatile_contig7:420191..420267Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 420192..420267 -
1622817115.6877606-CDS-P-fluviatile_contig7:421054..4212361622817115.6877606-CDS-P-fluviatile_contig7:421054..421236Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 421055..421236 -
1693571189.4461665-CDS-P-fluviatile_contig7:421054..4212361693571189.4461665-CDS-P-fluviatile_contig7:421054..421236Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 421055..421236 -
1622817115.7004397-CDS-P-fluviatile_contig7:421766..4219051622817115.7004397-CDS-P-fluviatile_contig7:421766..421905Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 421767..421905 -
1693571189.4606054-CDS-P-fluviatile_contig7:421766..4219051693571189.4606054-CDS-P-fluviatile_contig7:421766..421905Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 421767..421905 -
1622817115.717675-CDS-P-fluviatile_contig7:422508..4225851622817115.717675-CDS-P-fluviatile_contig7:422508..422585Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 422509..422585 -
1693571189.4789996-CDS-P-fluviatile_contig7:422508..4225851693571189.4789996-CDS-P-fluviatile_contig7:422508..422585Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 422509..422585 -
1622817115.7280252-CDS-P-fluviatile_contig7:423349..4237381622817115.7280252-CDS-P-fluviatile_contig7:423349..423738Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 423350..423738 -
1693571189.5008123-CDS-P-fluviatile_contig7:423349..4237381693571189.5008123-CDS-P-fluviatile_contig7:423349..423738Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 423350..423738 -
1622817115.7383049-CDS-P-fluviatile_contig7:424398..4245691622817115.7383049-CDS-P-fluviatile_contig7:424398..424569Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 424399..424569 -
1693571189.5174966-CDS-P-fluviatile_contig7:424398..4245691693571189.5174966-CDS-P-fluviatile_contig7:424398..424569Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 424399..424569 -
1622817115.748169-CDS-P-fluviatile_contig7:425020..4251291622817115.748169-CDS-P-fluviatile_contig7:425020..425129Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 425021..425129 -
1693571189.5284805-CDS-P-fluviatile_contig7:425020..4251291693571189.5284805-CDS-P-fluviatile_contig7:425020..425129Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 425021..425129 -
1622817115.7575388-CDS-P-fluviatile_contig7:426092..4263021622817115.7575388-CDS-P-fluviatile_contig7:426092..426302Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 426093..426302 -
1693571189.539313-CDS-P-fluviatile_contig7:426092..4263021693571189.539313-CDS-P-fluviatile_contig7:426092..426302Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 426093..426302 -
1622817115.7680187-CDS-P-fluviatile_contig7:426839..4269781622817115.7680187-CDS-P-fluviatile_contig7:426839..426978Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 426840..426978 -
1693571189.5501783-CDS-P-fluviatile_contig7:426839..4269781693571189.5501783-CDS-P-fluviatile_contig7:426839..426978Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 426840..426978 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig7.13471.1

>prot_P-fluviatile_contig7.13471.1 ID=prot_P-fluviatile_contig7.13471.1|Name=mRNA_P-fluviatile_contig7.13471.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=579bp
MFTTPGGREGFRGIGRHRPGGAAAGGAAFLSDADSGRVQPRGGRGTGGAV
LEAGTGAAAVQIGGGARGAPVAASSVSGRSPEQRGRGAPFKARRKTKIYP
SSTALNAKNWRIWLKASLDMRGIVRLLGALQSNGFASGIYLHPAMLNHSC
RCVPNAVKWRAGKSIADRQSYQRPRRGRGEDNGSNKREEEECLLSEIRAT
ELITKGEEITISYLEPREIARDSRQSRLKEQFGFHCDCALCERSSGSSGS
STSSSSGAATATLSKSTAALEQLIERGREKKAAGFAERHDVGNGNVDGGP
STANGSGGGDGEGVGSQNAREVEEDEDEDEDEDEEEDRGGIVARAILERR
LDAAESVIDLSRANEVRWAGVLSEVLGYRWQACQWLSARHISLARADKLI
AKACIAILQGEGAIEAAQSDADCTEAVRQASDGLPFSFGGGKRGDKSPPP
FQGSFKARLLAVFLSALISRRKTQLLYLGNGPHPETGACLADMSQAMGML
LAQGFEGGKWIERLPGHEIDGDDGGGATTPYEGARGGGGKGEARDGLWWG
DGGTSGASLFERECDKAAKRIGRLFDAP*
back to top

mRNA from alignment at P-fluviatile_contig7:418945..429551-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig7.13471.1 ID=mRNA_P-fluviatile_contig7.13471.1|Name=mRNA_P-fluviatile_contig7.13471.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10607bp|location=Sequence derived from alignment at P-fluviatile_contig7:418945..429551- (Porterinema fluviatile SAG_2381)
AAGCACCTCTGTACACTGCATCCCTGAGATACGAGCGGCGGGACTGTTGG
TGGGGCCCTGCGCACGAGATAATAGGGAATGCACGATGCAGAGAAAGAGA
GACGCAGCGTCTCTCCACAGGCAAACTACGTCGCGAGCTTGCGTACACCC
GCAGTAAGCTGAATGGCGACGGATCCCTGGGATGTGTTTGGTTCGGACAG
CGATGAAGACAAGTCGGCAACCACGGTGAGCTCGGAGTTTGGGTGCCTAC
AAGGCCCTCTCCAATTAAAGGTTCCCATTCTCCGTCATCGCGTCTCTCCT
GTGTCTGACTGCCTCTTTGTGTATGACGTCTTGTTGCGCCACCCTTTTCT
TCGATGTATGAGCACACCTCGTTCGATGGGTGAAGCGGTTTGGGTCACAC
GGCTGGTGTTGGTTGACACGCCTGGTGTCATGTTGCAAAATCTGACAGTC
CCGAGTTTATTCTGAATTTGGACAACACACACAAGATTTGCACCGCGTCT
CCCTATCGATGCATCGATGCATCGATAGATGATATCATGCGGCATAATTT
TCTCGGCGGGCTGCACCTGTTTTCGTCATCTAGATCTAGGGTTGCTGCAG
TCGCCTGCCTGGGTGTTCGCAAACTCGACACCCGGCGAACTCAGCTCAAG
TGACTGCCATCGGATGGTACCAGATAATTTCGATTTCAGAATGGTCAAGA
ACTGCTGTGTCCGCTCTCGAGCACGTTGCCATTTGCTCAGGAGCTGGAAA
AGGCAAACCACCAGGAACGGGTATGCTTCCCCGTCCAGGATAGGACGACT
CAAGGGGGAAGGCGTGGAGGGTCCTGCGCCCCTCGTAGATCAGGGTTTGG
GGACACTCTCCGACACACCCTTCCCAACTCTGTCCACTCCTTGACGCCCC
TTTGAAAGTTTAGCCACAATTCCGTTCGTAAGACCGGATCAGATGCCCAT
AGAGACGTTTGAATGGGTGAGGGAATGGGTGTTGTTGTTTCGACTGTTGG
CAAGATCAATCAGAGCGCTTTGGGGGGGGGGCGGCACGCGCGGACAACAT
CCAACGGTGCCATCGTGCGGGCGACCCTTTCGATTGGAAATGGAGGTGGT
CCCCTGTACACGTTCCTGCCTCGTTCTCTCACTTGCGTCCGTCCTTTTGC
CCCGCTTTTTGCCCTCTACGCGTCGCAGTTCACGCCGACACCAACACCAG
CGGCGACGGCGGCGGCGGTGCACCCACCGGCTGCCAAGAGAACGGAGAGA
CGGTACGCCTGGGAAGTCCTCCTGCCGATCTTTCGGTTCCCACCGGGCTT
TACAGAAGGCGGCGACGGTCCGGCTGTGGGGCACAATGCCGCAGGAGCTA
GAGCCGGCTCAGCAGAGGCAGGGGTAGGATCACCAACTCTGGCGCCGTTC
TCATCGCCTCCCGTGTACCAGGTGACGATTGATGTCTGGTCCATGCACAC
GAATACGCAATGGCATGGGATCGTAGCAGTTTTGACGATCATTCGGTGCG
CACCCACCAGAGTTATCATTCCGCGAATCGGGGGCCAGAACACAGCGGTG
GGCTTCGCTATTGGGCGTCCACTCGGCGGCATATATCCTTCCCTGGGTTT
AGTTCTTTTTCCAACACAGACAGTAGAGGACATTTGATGTTCTACAAATC
GACTCCGAGTAAACGCGGCGAAAGGAACAGAGCGAGATTCGCGATGACAG
ACGGCGGCGGCTTGTCTTGGCTTCGTACGGTGGAAAGGGAGGGGCGAGTT
CTCCGTCCCGAACGACACGAGAGTTTGCTACGATAGGGGGCCCGATACGC
GGCGGTCTGGAAAGGGCCGTTGTCCATTGTAAAGCGGTTGAAGACACTTG
GCATGAACGTTCACGCACATTCTCGAAACATTTACTTTCCCTTTCCGGTA
TGTGGCGGGTGAGAGTTGCCAAATATAACGCGGTCGATTTCAGCGGCCCT
TCCACCGCCTTATCTCGAGCCCCCCACTGTACCACGCACTCTCTCTTGCC
ACCCCCCGCCTCCGTGCCTAGTTGGGACGGAGGATGCTTTAATTGTGGGT
ATTACTCCGGAGTATTTATCTCTGCAGTTTGTGTTGTTTCGTGTACCCTA
CCAGATCTGGCCACTTGAAATACATCGCCCTGGCGAGAAACTGCCAAGAC
ATCTGCGAAGACGACGAGTTCATTATCAGAAACAACGAGTATATCATCAG
CAATAACGACTTGGTCACCAGCTTTGGTGTTTGTATTTGCGTCGACTACA
ACAGCCCTCACAGTGGTGTTTTTTTTTCTGAACTTTCCTACGCCATTGGC
CCCCTCCTACGTCCCCAATAAAATATCTACCTTCGCGCCCGCCTTTCCTT
GCGCCCATTCTCGCCCTCAGAACGATGTCTTCAATGTTGTTGGGGAGGGT
CTCAACAGACCACTTTTCATCTCGACTTTTCTTTCAAAACAGGGGAACTA
AATTTGACAACGACTTCTTGCTGGACCTCTCCGTACACCTTCCGCCGTTA
GGCATTTCGACCCTTTGCTCCATGCCCTACACCCTCTTGCCTTTCCCCAG
CATCCTTCCGTCCAGTATGAGGCATGTTTACCACACCGGGGGGGAGGGAG
GGGTTTCGTGGCATCGGCCGACATCGCCCCGGGGGCGCTGCTGCTGGTGG
AGCGGCGTTTCTTTCCGATGCCGACAGCGGTCGAGTGCAGCCTCGCGGGG
GGCGTGGGACAGGTGCACGGCACATGAACTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGCTGTTGTTGTT
GTTGGTGGTGGTGTTATGTCGGTGCTGTTATTGTTGTTGTGCTTTTTGTT
ACTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGT
TGTTGTTGCTGTTGTTACTGCTGCTGCTGCTGGTGCTGCTGCTCTTCTTT
TCCCTCACGTTGCTCCCTCTGTAGTGCTCCGGGAAATTCCGTTTAGAATG
AGTGATTTCGTTTAGAATTAGTTTGGTGACTGAACCCCGGTTTTGGTTTC
AAAGCGTTGACCAAAAGATGGACAAAAGATCGTACACTCTTCGCCAGGTT
TCGTGACCCCTTCGCCGATCTCTGCAGGTGTTAGCGTTCACGCCGTGGTC
GCGCCAATACCTTCGAGCTCTACGTTTTCTGGCGAATGATTGTGGAGTTT
TTCCTGCGTGTTTCTTTCAGTTAATCGCTTCGTGTATCTCCCATCGCAGG
AGGAGCTGTGCTTGAGGCGGGTACTGGAGCTGCCGCCGTCCAAATTGGAG
GAGGTGCTAGGGGAGCTCCGGTGGCTGCATCCTCAGTCTCTGGAAGATCT
CCCGAGCAACGAGGCAGAGGCGCTCCTTTCAAGGCAAGGAGAAAAACAAA
GATCTACCCTAGCTCCACTGCTCTCAACGCCAAAAACTGGCGAATTTGGC
TAAAGGCATGTACGCTGCCGTGTCCGGGAGAGGGTTGTCGAGCAAAGAAG
CAACCATGATTGGTACTCGGCGGATGGGGAACAGACTGATGTACACTGCT
GTCAAGGTAACGGCTTTTCCGATATCGGGCTGCTGGTGTTCAAGCCCGAG
AAACAAACTGCAATGGCGCGGCCGGCGGTCAAGGCCCCAGCCCGAGAATG
GTGTTAAATCGTGGGGAAACCTTTATTTCTTTGCTTAAGCCCGACGAACT
AGCCTCACGCCCGTCCTTTTGTTCAGGCTGCCGGAGATATTTCGAAGTAA
TCTCATCGTCGGCGGTGTGTTTGATGTGTTGTTTCGCGCGGGCTCCTTCG
GCCATTATGTGCCTGTTTCACCACCCCGGTGTTGTGTTGATGTGCCATTT
GCATCACCCCGGTGCTCGCCATCGTCGGTTACTCCCTCCGCGGGCAGTAG
GAGGGGGCGTACTCATGTTTTGCATGCCTTAGTTGTTAGACCATTGACCA
CGCGTCCTCGAGAGGACGGAGCAGGAGGGGGGCGAATGTTTGTCGCGATC
GTGCTCGCATCACCTTTCGCGAGCGATCAGTCCTCGCGGCTGGATCAATC
GTTACGTGGCGTGTGTTGCTGACATTTACCTAGAAGGAGCTTTCCGATCC
CCTCGCCGTACCCTCAAATGCCCGGCCTGGCCCGTGCTGCCAGTCTGCTT
CCGTGGTGAGGCGCGAAATTCACGGAAAGGGGTACGAGAAGGCAAACGAA
GTGACCACGTGGAAGCCGAGCGAGTCAGCACGACGCAAAACCAGTAAAGC
ATTGCGTCAGTAGCCGATCCTTTTGGTGTTAGAGTCAGAGATATCTCTTC
GTGGAGTAAAATTTGAACACTTTTCATGTTGTTGCTTGACTTTTTGGTCA
GGCACGACGAGGCCGCAAAGTCCATGCTATCAAAACTCAGGCGGAGATCC
TCCGCTGGGGAATACACTTCAGCATTAGACATGCGCGGGATCGTCCGCCT
GCTCGGCGCGCTGCAGAGCAACGGCTTCGCGAGCGGGATCTACCTTCACC
CTGCCATGCTCAACCATAGCTGCAGGTGTGTGTCTCTGTTGTTTTTGTGG
TTGCCGTCGTCGATTGTGATGACCGTGGAATCTTCGCGCAACGAGCCGCT
CTCTTTTTCCGTTTGTCACGAGTCGTGTGCATATCCGTGTCTTCTGCATT
TTCATGTGTTGTTTCAACGAACCAACGGATCCTTTCGAGCATTGCACGAA
GGGGGCATGCGGTAGACTTGCAGCTTCTCAAAACTTTGTACATCTCTTCG
TGGTATTTTTCTGTGTGAATGGATGGTACTATCGTCGGACCTTCTGTGTT
GTACAAAATCTCCTTGCCCTCTCCCCTCCAACATATTGACCAGCGCTCCA
GCATCCACGTTCAAAAGAGAGGAAGCCTCAACAGCACGGCGTGCGTGCGT
ATGTGTGGTCTTGGGTGAACGCATGTGGAACCTTTCATGTTGCTTGACTT
TCGACCGACGCTTACTTCTCTTACTGGACAAGGCCGAATGCCGTCAAGTG
GCGCGCGGGTAAATCCATCGCCGACCGGCAATCGTACCAACGGCCGCGAA
GGGGGCGCGGGGAAGACAATGGCAGCAACAAGCGGGAAGAGGAAGAGTGC
TTGCTGAGCGAGATCCGGGCCACCGAGCTCATCACCAAGGGGGAAGAAAT
CACGTGAGAGAGTCAACATGACCACTTTATTCACAATGCGAAGCATTGCT
TGCCTTATTTGACAAGATCCCGGTCTTTTGCGGCCGTTTTCGAGGCCAGA
ATAACTTTGTACAGGCTAGGCATGTGCCGTTGTAGTCCGAAACGACGATG
AGCTTCGATATATTCAGCTAAATGTATGCTGAAAGCGGTTGTTACACACC
CCTCCAAAGAAGCTTCACCTGGTTCTAAGTCGCAGCTTACATTCGCACAT
GTTCACTGTATCCTTGCGCGCCACTTTATTGTCTAACTGGCGCGGAAAGA
GTTTTGCATTCTGTACCAGAGCCAAGAGCAAAGTGTAAAAAATCTCGACG
AAGATTCTTAGGAGGGCCTACGTCCGTTTCAGACCAGAGCTTCCTAGAGG
GTTGTAAGCTGACTGTTAAGTGCGCGGCCCCTCATTCTGACCTAATTGAA
TGATGGTTATCATGTGGTAAAAAGCCGAAAAACGGGTAGTTCAAAGCTGT
CTGTGAGAAGTCAGGCTGGCTAACCAATTCAACCCGTCTAGGAGAGCATG
TGGTCACGCATCGCCTAGCCAGGAATCATATGCGACTCCTCCTCGACGCC
TTAACGAGCTCTCTTTATTGGCGGCTGGCGGCTCTTGGCTGCGCAACCGA
CTCAACGCACCAGGATATCCTACCTGGAGCCGCGGGAGATCGCGCGGGAT
TCCCGGCAGTCCCGACTCAAGGAACAGTTCGGCTTCCACTGCGACTGCGC
TCTTTGTGAACGAAGCAGCGGCAGCAGCGGCAGCAGCACAAGCAGCAGTA
GCGGTGCCGCGACTGCTACCTTGAGCAAGTCTACAGCCGCACTCGAGCAA
TTAATTGAGCGAGGACGCGAGAAAAAAGCGGCGGGCTTTGCGGAACGGCA
CGATGTTGGCAACGGGAACGTTGACGGGGGCCCGTCGACAGCGAATGGAT
CAGGGGGGGGCGACGGGGAGGGGGTGGGATCACAGAACGCAAGGGAAGTA
GAGGAGGACGAAGACGAGGACGAAGACGAGGACGAAGAGGAAGACCGCGG
AGGTATGGAAGGCCCGAAGGCAGTTTGTCCTCACCCCCTTTCATGTTTGT
TCAGGTATGACTTTCCAGCTGGTGCACGTATGGGGTAACTTAATCGGTGG
TTGTTCGTGAGAAGCGAGAGGGGGGGGCTGCGCCACAGGACAGAGGGGGA
TGCTGATCAAGAGGAATGAGGTGGGTAGCTTTCGCCGAAGGGCTGAGTTT
CACCTGCGAACGTGGTTTGTGTCGGAGTAAGGGGGTGGTTGCACGCGTTA
AAGATGTACAATCAACGAAGACACCTTGCAAAGCCGGCCCTGAGGAACGT
TCTTGCAGAAGAAGGCAGGTAGCCCCGATTTTCTGACGTTGCTAGCCATT
TATCCAAGACCACCGGATCTATGCAACTAGCTCATCACTGGCTCTTGTTT
ACAAACAAGTGCAACTAACCCTAAGTTTGAGGACGCGGTGATGCACTTGT
GTACAAACAATTATGCCCCACAAAAAGCAAGGAATTATGACTTTCGGATC
ATATTGTGTTGAAAATTGCGAACACAAGAAAACTTCAAACCTCGGAGCTT
GTCGTTGACGAGGGGTGTGCTTGGTCAAGTGTCAGCTTGGAAGGAATCAA
CCGAAGCCAGCAAGGTCGAGACAACAGACACTTCTTGTTTCAGTGTTTCG
CGTGGAGATCAAGGAGCGCATGCGTCCACCGCACCTGAGCTGATTTCACT
CGGCACGAGTGCCTGATACGCCGCGGAATGTCCCTGGTTGTCTCGTGTGT
GTGTATGTGTTTTCAGGGATTGTGGCGAGAGCTATTCTGGAGAGGCGGCT
GGACGCGGCCGAAAGCGTGATTGACCTCTCGAGGGCGAACGAGGTGAAGT
GAAGCAGGGCCTGACCACGCGCAGCACTCATTCCCTCAGGGTCTTCTGCA
TGCAGTGCCGCGCATCGCGTTGGGCTACAAACTTATGCGGCGTGAATGCT
GGCCAAGTGCCCAAGACAGTGGGCTCTGGCCACTTGGAGAGAGTCTCCAG
TTTTGAAGAACTTTATCTCAGACGCATGAAAGTCGAAGTATTTTTGGAAG
ATTTTCCTCCTTGGTATCGGAGATAGTGGAAGCTACAACCGCCCCCAAGA
TTCTCTACCATCACCAACAATCGAACTTGCGAGCTTTTAAGTCACAAGGG
GGCAACAGTGGTAGCGGTGGGCTCGGGTCGTGTACGCAGGTGTAACGCTC
TGATGTGATACATGGGCCGCTGGAATGTTGTCGCTATTTCACGGGCAGGC
AGGCCTTCATCCCTCCCTGGGTGGTCATCAACATCAGCGAGAAACTCTAC
ACTGACCCCGAGCCCGAAGACGGTTACACAATACACGCAGGACATTTTCT
CCCATTCGTCACTCTCCAACGTCGTCCCGTGGTATACATCACGAACATGA
GGTGCGCACACCGCTGACGCTGCCCCTTCTTGACCGTAACCTCTAGGTGC
GATGGGCCGGAGTGCTGTCTGAGGTGCTGGGCTACCGCTGGCAGGCGTGC
CAATGGCTTTCCGCTCGACACATATCCCTCGCGCGCGCGGACAAGCTAAT
CGCGAAGGCGTGCATTGCCATCCTGCAAGGCGAAGGTGAGAGGCGCGAGC
CTGGTTCCAAGAGAAGTCACCGATTGCCATGTGTTTTGCCTTCTCGCGCT
CTCGCCGCTTCAGCAGGCACGCCCCCGCCTCTGCCCTCCCCTAGATGAGA
GAGCCACCTCACAAGGCGCCAAGAACAGCACCACTTTCCCGGGGTCTGTT
TGGTGCCCGCTGGTTGGCTCACAAGTGTGTCTTGGCAAAGACTGTACGGA
GATCAGCGCCCGTTTGTCGCCGAGGTCTGCCGGATTCCGTTGTTGTTAAC
TCCCCTGTTGTGATCCTATCGCTATTCCAGCTTTGGAAGTTGAACGCGCT
TCCGCTTTGCTCCTCACCTGTGTATCTGGCTGAACCACGCTCGACGAATG
TATGGTATGCTTGCACAAAGAGCTATTTCCGACCGCTTTTCGACAGGAAG
ACCCTGCTGCGATGTTCAGCATCCCGTTCGGCGCCTGGAAGATTACGTCC
CGAAATCGCCGAACAAGAACAAAGCGTCCCAGCCCTCTGCTCGACGCGTT
GTCGTCTTATTTCAGGCGCGATAGAAGCGGCGCAATCAGACGCGGATTGC
ACGGAGGCCGTGCGTCAAGCCTCCGACGGCCTTCCATTCTCGTTTGGGGG
CGGAAAGCGTGGCGACAAGTCACCACCGCCGTTCCAGGGAAGTTTCAAGG
CCCGGCTGCTGGCGGTGTTTCTCTCTGCCCTTATCTCAAGAAGAAAGGTG
CGATTGCCGTGTCGTCGTTTGCCCCGCGCGTTCGTTTTCGGCGCCACTCG
GAAAGCAACAAGATGATGCCGATCTAGTCGCCTGCTGTAATGAAGACTAA
ACCAAAAGGGTATTCGTCGTTTTTGCGTGTTGCAGCCCTTCTTGACAACC
TCCGGCGTATCTTGTGCCCAGATCAAGGGTCGGTTTTTACGGACGGCAGA
TGGTTGTGGCGGGAGCGTCTATTTGTGACGGCCTCGTGGAGTTTTTTTAG
CACCAAACCCAGCTGACTGCTGGGCATCGCAATTAGGACTGCTATTTTAC
ACACAAGATATCACACTCAACTTTCAGAGCTCGATTTTTCCATGCGTTGG
AAGTTGCCAACACCTTCTGAATCATCGACGGAAGGTTTCATTCGAAGTTT
AACTTCCATCCATTCGGGTAATCCGCAGTCTTGTCGAAAATTGAGCCATT
ATACGATGATTGCGGGGCGTGCGATATCTACAGTTGCATGCGGTCGATGA
CTCGCTGCAGCACAGGCAGACTCGAGAAAGAATCGACTCGCGCAACCGCT
CCGCAGCTCACGCTGCTCGAGTGTTGCTCTTTCTCGTTTTCCAGCCTGAA
CCTAGAACGCAGACGCCACGTCCCTTTTTGTTTGTGAGTGAATAGGTCTT
GTTCGTTTCATTCGTTTTCTCTGACGTTTGGCATTTCCATTTCTTCGCAC
CGAGTCTCCTTCGTTCACTCTATCATCTGACATTTCCGTTTCCTCGCGCT
GTGTGTCACCTCGTGAAATCTGTATGTTTGTCAGACCCAATTACTGTATC
TCGGAAACGGCCCACATCCTGAAACAGGAGCCTGCCTGGCGGATATGTCT
CAGGCTATGGGTGAGCATGGTGCTGAACAAGAGAGCAGTGTGACCCGTTC
GTCGGGAAATTGCGCAGCCGATGTTGAAAATTGCCCCTAAAAAAACTCAG
TGGTTGCCGCAGTCGAAGTTGGTCGTCCAGAGGGTTGTGGTTGGCTGGTG
CTGTCACGTGCGAATGGAGGGGCTAGTTCTCGGACTTTTACCCGCAAGAT
GCTGGGGCTGATAGGGGAAGGGTGTCGTGGTTGTTTTCAGCGAGGGATCT
GTGACGTCCTGACTGTGTCGGTGGCCTGGGCAAATTTTGTGGCATTTCGA
GCTTGCGCTCGGGATCATGGGCATCCCCATAATGTCGACAAACCCCCTTC
CCCAACCCTGCTTCCAGGAATGCTGTTGGCGCAAGGGTTCGAGGGAGGCA
AATGGATCGAACGTCTCCCAGGTCACGAGATTGATGGTGATGACGGAGGC
GGGGCCACTACTCCCTACGAAGGGGCTCGCGGAGGCGGCGGGAAGGGCGA
GGCACGGGACGGATTGTGGTGGGGTGACGGTGGAACGAGCGGGGCGTCTT
TGTTCGAGCGAGAGTGCGACAAGGCAGCCAAAAGGATTGGACGCCTCTTC
GATGCGCCATAACCCGTGAAGGACGCCGTACTGGACAGGTTGTCAGATCT
AAAGACTGCCAGATGCGTCATTGCCTGCAAACTCACGGGTTGTTGGTTGG
GGCCTATAGGTGTGCGGCCACCAAGGAATCTCAGGATTAAGCAACAAAAG
GTCCTCGCCTCAGACGGAGCTTTGCCAGGCTGACATATTCGTTAAAGCAC
ATGTGAGAGAAAGGTTTGCGAGCTGCGGCGCGCGGATGTTGTATGACGAC
AGACTGCGGCCTTCTTACAAGTCGACAGCAGCTGCATTTTTTTAAAATTC
TGTGTCATGGGTTGTTTTCTTTATGCAAGCTGAATGCCGTCCTTCGCCGA
TCCAGCGCCGTGTGTGCGCACAAACCGCCAATTCCAGAGGAAAGGGCATG
GACCACGACGATTTTTCCATGGCTCTAGCTGGAAATCTTGCGTAACATCA
ACCACGTCACGAGGGCCAGATGCGTCACTGCCTGAAAACCCACGGGTTGT
TGGTTGGGGCCTATAGGTGTGCGGCCACCAAGCGAATCTCAGGATTGAGC
GAAAAACGTCCTCGCCCCAGACGGAGCTTTGCCAGGCTTACATGTTCGTT
AAAGCACATGTGAGAGAAAGATTTGCGAGCTGCGGCGCGCCTATGGTTGT
ATATGAC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig7:418945..429551-

>mRNA_P-fluviatile_contig7.13471.1 ID=mRNA_P-fluviatile_contig7.13471.1|Name=mRNA_P-fluviatile_contig7.13471.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3474bp|location=Sequence derived from alignment at P-fluviatile_contig7:418945..429551- (Porterinema fluviatile SAG_2381)
ATGTTTACCACACCGGGGGGGAGGGAGGGGTTTCGTGGCATCGGCCGACA
TCGCCCCGGGGGCGCTGCTGCTGGTGGAGCGGCGTTTCTTTCCGATGCCG
ACAGCGGTCGAGTGCAGCCTCGCGGGGGGCGTGGGACAGATGTTTACCAC
ACCGGGGGGGAGGGAGGGGTTTCGTGGCATCGGCCGACATCGCCCCGGGG
GCGCTGCTGCTGGTGGAGCGGCGTTTCTTTCCGATGCCGACAGCGGTCGA
GTGCAGCCTCGCGGGGGGCGTGGGACAGGAGGAGCTGTGCTTGAGGCGGG
TACTGGAGCTGCCGCCGTCCAAATTGGAGGAGGTGCTAGGGGAGCTCCGG
TGGCTGCATCCTCAGTCTCTGGAAGATCTCCCGAGCAACGAGGCAGAGGC
GCTCCTTTCAAGGCAAGGAGAAAAACAAAGATCTACCCTAGCTCCACTGC
TCTCAACGCCAAAAACTGGCGAATTTGGCTAAAGGCATGAGGAGCTGTGC
TTGAGGCGGGTACTGGAGCTGCCGCCGTCCAAATTGGAGGAGGTGCTAGG
GGAGCTCCGGTGGCTGCATCCTCAGTCTCTGGAAGATCTCCCGAGCAACG
AGGCAGAGGCGCTCCTTTCAAGGCAAGGAGAAAAACAAAGATCTACCCTA
GCTCCACTGCTCTCAACGCCAAAAACTGGCGAATTTGGCTAAAGGCATCA
TTAGACATGCGCGGGATCGTCCGCCTGCTCGGCGCGCTGCAGAGCAACGG
CTTCGCGAGCGGGATCTACCTTCACCCTGCCATGCTCAACCATAGCTGCA
GGTGTGTCATTAGACATGCGCGGGATCGTCCGCCTGCTCGGCGCGCTGCA
GAGCAACGGCTTCGCGAGCGGGATCTACCTTCACCCTGCCATGCTCAACC
ATAGCTGCAGGTGTGTGCCGAATGCCGTCAAGTGGCGCGCGGGTAAATCC
ATCGCCGACCGGCAATCGTACCAACGGCCGCGAAGGGGGCGCGGGGAAGA
CAATGGCAGCAACAAGCGGGAAGAGGAAGAGTGCTTGCTGAGCGAGATCC
GGGCCACCGAGCTCATCACCAAGGGGGAAGAAATCACGCCGAATGCCGTC
AAGTGGCGCGCGGGTAAATCCATCGCCGACCGGCAATCGTACCAACGGCC
GCGAAGGGGGCGCGGGGAAGACAATGGCAGCAACAAGCGGGAAGAGGAAG
AGTGCTTGCTGAGCGAGATCCGGGCCACCGAGCTCATCACCAAGGGGGAA
GAAATCACGATATCCTACCTGGAGCCGCGGGAGATCGCGCGGGATTCCCG
GCAGTCCCGACTCAAGGAACAGTTCGGCTTCCACTGCGACTGCGCTCTTT
GTGAACGAAGCAGCGGCAGCAGCGGCAGCAGCACAAGCAGCAGTAGCGGT
GCCGCGACTGCTACCTTGAGCAAGTCTACAGCCGCACTCGAGCAATTAAT
TGAGCGAGGACGCGAGAAAAAAGCGGCGGGCTTTGCGGAACGGCACGATG
TTGGCAACGGGAACGTTGACGGGGGCCCGTCGACAGCGAATGGATCAGGG
GGGGGCGACGGGGAGGGGGTGGGATCACAGAACGCAAGGGAAGTAGAGGA
GGACGAAGACGAGGACGAAGACGAGGACGAAGAGGAAGACCGCGGAGGAT
ATCCTACCTGGAGCCGCGGGAGATCGCGCGGGATTCCCGGCAGTCCCGAC
TCAAGGAACAGTTCGGCTTCCACTGCGACTGCGCTCTTTGTGAACGAAGC
AGCGGCAGCAGCGGCAGCAGCACAAGCAGCAGTAGCGGTGCCGCGACTGC
TACCTTGAGCAAGTCTACAGCCGCACTCGAGCAATTAATTGAGCGAGGAC
GCGAGAAAAAAGCGGCGGGCTTTGCGGAACGGCACGATGTTGGCAACGGG
AACGTTGACGGGGGCCCGTCGACAGCGAATGGATCAGGGGGGGGCGACGG
GGAGGGGGTGGGATCACAGAACGCAAGGGAAGTAGAGGAGGACGAAGACG
AGGACGAAGACGAGGACGAAGAGGAAGACCGCGGAGGGATTGTGGCGAGA
GCTATTCTGGAGAGGCGGCTGGACGCGGCCGAAAGCGTGATTGACCTCTC
GAGGGCGAACGAGGGATTGTGGCGAGAGCTATTCTGGAGAGGCGGCTGGA
CGCGGCCGAAAGCGTGATTGACCTCTCGAGGGCGAACGAGGTGCGATGGG
CCGGAGTGCTGTCTGAGGTGCTGGGCTACCGCTGGCAGGCGTGCCAATGG
CTTTCCGCTCGACACATATCCCTCGCGCGCGCGGACAAGCTAATCGCGAA
GGCGTGCATTGCCATCCTGCAAGGCGAAGGTGCGATGGGCCGGAGTGCTG
TCTGAGGTGCTGGGCTACCGCTGGCAGGCGTGCCAATGGCTTTCCGCTCG
ACACATATCCCTCGCGCGCGCGGACAAGCTAATCGCGAAGGCGTGCATTG
CCATCCTGCAAGGCGAAGGCGCGATAGAAGCGGCGCAATCAGACGCGGAT
TGCACGGAGGCCGTGCGTCAAGCCTCCGACGGCCTTCCATTCTCGTTTGG
GGGCGGAAAGCGTGGCGACAAGTCACCACCGCCGTTCCAGGGAAGTTTCA
AGGCCCGGCTGCTGGCGGTGTTTCTCTCTGCCCTTATCTCAAGAAGAAAG
GCGCGATAGAAGCGGCGCAATCAGACGCGGATTGCACGGAGGCCGTGCGT
CAAGCCTCCGACGGCCTTCCATTCTCGTTTGGGGGCGGAAAGCGTGGCGA
CAAGTCACCACCGCCGTTCCAGGGAAGTTTCAAGGCCCGGCTGCTGGCGG
TGTTTCTCTCTGCCCTTATCTCAAGAAGAAAGACCCAATTACTGTATCTC
GGAAACGGCCCACATCCTGAAACAGGAGCCTGCCTGGCGGATATGTCTCA
GGCTATGGACCCAATTACTGTATCTCGGAAACGGCCCACATCCTGAAACA
GGAGCCTGCCTGGCGGATATGTCTCAGGCTATGGGAATGCTGTTGGCGCA
AGGGTTCGAGGGAGGCAAATGGATCGAACGTCTCCCAGGTCACGAGATTG
ATGGTGATGACGGAGGCGGGGCCACTACTCCCTACGAAGGGGCTCGCGGA
GGCGGCGGGAAGGGCGAGGCACGGGACGGATTGTGGTGGGGTGACGGTGG
AACGAGCGGGGCGTCTTTGTTCGAGCGAGAGTGCGACAAGGCAGCCAAAA
GGATTGGACGCCTCTTCGATGCGCCATAAGAATGCTGTTGGCGCAAGGGT
TCGAGGGAGGCAAATGGATCGAACGTCTCCCAGGTCACGAGATTGATGGT
GATGACGGAGGCGGGGCCACTACTCCCTACGAAGGGGCTCGCGGAGGCGG
CGGGAAGGGCGAGGCACGGGACGGATTGTGGTGGGGTGACGGTGGAACGA
GCGGGGCGTCTTTGTTCGAGCGAGAGTGCGACAAGGCAGCCAAAAGGATT
GGACGCCTCTTCGATGCGCCATAA
back to top