mRNA_P-fluviatile_contig7.13579.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig7.13579.1
Unique NamemRNA_P-fluviatile_contig7.13579.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:1947607..1948387 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons1
Model size781
Cds size714
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817111.6477914-UTR-P-fluviatile_contig7:1947606..19476731622817111.6477914-UTR-P-fluviatile_contig7:1947606..1947673Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 1947607..1947673 +
1693571164.5069318-UTR-P-fluviatile_contig7:1947606..19476731693571164.5069318-UTR-P-fluviatile_contig7:1947606..1947673Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 1947607..1947673 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817111.6621735-CDS-P-fluviatile_contig7:1947673..19483871622817111.6621735-CDS-P-fluviatile_contig7:1947673..1948387Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1947674..1948387 +
1693571164.5256026-CDS-P-fluviatile_contig7:1947673..19483871693571164.5256026-CDS-P-fluviatile_contig7:1947673..1948387Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1947674..1948387 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13579.1prot_P-fluviatile_contig7.13579.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig7 1947674..1948387 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig7.13579.1

>prot_P-fluviatile_contig7.13579.1 ID=prot_P-fluviatile_contig7.13579.1|Name=mRNA_P-fluviatile_contig7.13579.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=238bp
MDTTAVLLLRKFRRACRLVSARLPPLSKIFRSAGAHSNTLSKGLEHPYIF
SIVLHQSRCLGANGLASRIRGKGSRTRDTLLLCCCVYHRTLFEHSEVMGR
ASRGSGTNRRAPLEGGFLDGPLPQPCRLYGATSLAGDAANAGAAASPLTR
ELSFNNMASEQGQGQGQLSVVSPAAWKGRERSVGESLRRALAAAAVLAVF
FTAAVSILGGDRALSKPAVMDVVRDSNPSVVAKVCVR*
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mRNA from alignment at P-fluviatile_contig7:1947607..1948387+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig7.13579.1 ID=mRNA_P-fluviatile_contig7.13579.1|Name=mRNA_P-fluviatile_contig7.13579.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=781bp|location=Sequence derived from alignment at P-fluviatile_contig7:1947607..1948387+ (Porterinema fluviatile SAG_2381)
AATCATGGAAATAAAAATAAGCGGGGAAAAAAAAAAGTGATGAATCGACC
TGTATAAAGTTTCAAATATGGACACAACAGCAGTCCTACTCCTCCGGAAA
TTTCGCCGTGCATGTAGACTTGTCTCGGCACGCCTTCCCCCCCTGAGCAA
GATTTTCAGGAGTGCAGGGGCGCACAGTAACACGCTAAGCAAAGGGCTAG
AGCATCCATACATCTTCAGCATAGTGCTTCACCAATCTCGCTGCTTGGGC
GCCAACGGGCTGGCGAGCCGAATCCGTGGCAAGGGCAGTAGAACGCGAGA
TACTCTACTACTGTGTTGCTGCGTTTACCATCGGACTCTCTTCGAGCACA
GCGAAGTCATGGGTCGAGCATCCCGAGGTAGCGGTACCAACAGACGAGCG
CCATTGGAGGGTGGCTTTCTCGACGGGCCGCTGCCCCAACCTTGCCGCTT
GTACGGTGCTACGTCCTTGGCCGGAGATGCTGCTAATGCCGGTGCCGCCG
CGTCTCCTCTGACCAGAGAGCTGTCGTTCAACAACATGGCGTCGGAGCAG
GGGCAGGGGCAGGGACAGCTGTCGGTGGTGTCGCCAGCAGCGTGGAAAGG
AAGAGAGAGGTCGGTCGGGGAGTCCTTGCGGAGAGCTCTTGCAGCAGCGG
CTGTGCTCGCCGTTTTTTTTACTGCAGCCGTCTCCATCCTGGGTGGCGAC
CGGGCGTTGTCGAAGCCTGCGGTGATGGATGTGGTCAGGGACAGCAACCC
GAGCGTGGTGGCCAAGGTATGTGTGCGATAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig7:1947607..1948387+

>mRNA_P-fluviatile_contig7.13579.1 ID=mRNA_P-fluviatile_contig7.13579.1|Name=mRNA_P-fluviatile_contig7.13579.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1428bp|location=Sequence derived from alignment at P-fluviatile_contig7:1947607..1948387+ (Porterinema fluviatile SAG_2381)
ATGGACACAACAGCAGTCCTACTCCTCCGGAAATTTCGCCGTGCATGTAG
ACTTGTCTCGGCACGCCTTCCCCCCCTGAGCAAGATTTTCAGGAGTGCAG
GGGCGCACAGTAACACGCTAAGCAAAGGGCTAGAGCATCCATACATCTTC
AGCATAGTGCTTCACCAATCTCGCTGCTTGGGCGCCAACGGGCTGGCGAG
CCGAATCCGTGGCAAGGGCAGTAGAACGCGAGATACTCTACTACTGTGTT
GCTGCGTTTACCATCGGACTCTCTTCGAGCACAGCGAAGTCATGGGTCGA
GCATCCCGAGGTAGCGGTACCAACAGACGAGCGCCATTGGAGGGTGGCTT
TCTCGACGGGCCGCTGCCCCAACCTTGCCGCTTGTACGGTGCTACGTCCT
TGGCCGGAGATGCTGCTAATGCCGGTGCCGCCGCGTCTCCTCTGACCAGA
GAGCTGTCGTTCAACAACATGGCGTCGGAGCAGGGGCAGGGGCAGGGACA
GCTGTCGGTGGTGTCGCCAGCAGCGTGGAAAGGAAGAGAGAGGTCGGTCG
GGGAGTCCTTGCGGAGAGCTCTTGCAGCAGCGGCTGTGCTCGCCGTTTTT
TTTACTGCAGCCGTCTCCATCCTGGGTGGCGACCGGGCGTTGTCGAAGCC
TGCGGTGATGGATGTGGTCAGGGACAGCAACCCGAGCGTGGTGGCCAAGG
TATGTGTGCGATAGATGGACACAACAGCAGTCCTACTCCTCCGGAAATTT
CGCCGTGCATGTAGACTTGTCTCGGCACGCCTTCCCCCCCTGAGCAAGAT
TTTCAGGAGTGCAGGGGCGCACAGTAACACGCTAAGCAAAGGGCTAGAGC
ATCCATACATCTTCAGCATAGTGCTTCACCAATCTCGCTGCTTGGGCGCC
AACGGGCTGGCGAGCCGAATCCGTGGCAAGGGCAGTAGAACGCGAGATAC
TCTACTACTGTGTTGCTGCGTTTACCATCGGACTCTCTTCGAGCACAGCG
AAGTCATGGGTCGAGCATCCCGAGGTAGCGGTACCAACAGACGAGCGCCA
TTGGAGGGTGGCTTTCTCGACGGGCCGCTGCCCCAACCTTGCCGCTTGTA
CGGTGCTACGTCCTTGGCCGGAGATGCTGCTAATGCCGGTGCCGCCGCGT
CTCCTCTGACCAGAGAGCTGTCGTTCAACAACATGGCGTCGGAGCAGGGG
CAGGGGCAGGGACAGCTGTCGGTGGTGTCGCCAGCAGCGTGGAAAGGAAG
AGAGAGGTCGGTCGGGGAGTCCTTGCGGAGAGCTCTTGCAGCAGCGGCTG
TGCTCGCCGTTTTTTTTACTGCAGCCGTCTCCATCCTGGGTGGCGACCGG
GCGTTGTCGAAGCCTGCGGTGATGGATGTGGTCAGGGACAGCAACCCGAG
CGTGGTGGCCAAGGTATGTGTGCGATAG
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