prot_P-fluviatile_contig69.13421.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig69.13421.1
Unique Nameprot_P-fluviatile_contig69.13421.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1096
Homology
BLAST of mRNA_P-fluviatile_contig69.13421.1 vs. uniprot
Match: A0A6H5KG38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG38_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 1.800e-86
Identity = 346/831 (41.64%), Postives = 424/831 (51.02%), Query Frame = 0
Query:  250 SSAPDPLARFNKE----LKQHVRLGRGEEAAALIARMRETGGEAGPTARNYTSAINACKNGDTAQWRQALDLLREVVAGGGXXGVTPDAYHYTAAMKACGRAKQWEQVSALRSEMESLGITPNLSYYHWAINVASRTGVDGKDSEGGATGGDIP-RGWMAVKDLVAEMAEKEVTPQPLSYELVRKAKYRLQGPRS-NANKSGDXXXXXXXEIQGAGDDVVDGG---LEWAYKVLGGIEGAPQPPPLAPKXXXXXXXXXXXXXXXXXXXXXXXXXAGVDNIGPALSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSADPP--GSLEECNEELKKLARLGQGQEAAALVFRMRETGGALAPTLKSYTSAINACGNGSRVEWRQALALLREAAAAVPEKGDRGGDRVPPPNAFHXXXXXXXXXXAHQWKQIPPLLSEMESRGMCPPAEFYNWAIKMATMPKTGPRMRSLMIRGGGWRV-TTELD--HGRGGGGSDGGDGDLPQSPQQLCGWEAATALLREMVSKGVAPKSTTYTLVMTACRRDGVPEQALAVLREMQERAXXXXXXXXXXGEIGGEGDSAGGLPPSPADFGGGADTDREEGEEEDDGGDSDVXXXXXXXXXXXXXXXXXXXXXXXXXXGWGPRNIGPAYRQSPSRSQSLGWRRDAQVGPSLIHYSAVMSAFAEQPGGWKHILALVQEMEAGDVPPNVYTYNKAIVACGREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPATNTTASKTDGKAAAVAAVPTVSAPTIEAYTSAISACGYAGQWEVAIGLLREVTDGHAAAA 1066
            ++A  P   F +E    L++H + G GE+A ALIARMRE G    PT R+YTSAINAC+NG T+QW++AL+LL+E    GG  G+TP+A+HYT  ++AC  A Q +Q+  L+SEM SLGI P LSYYH A+  A               G + P +GW  +K+LV+EM+EK V P   +Y LV + +  L    S   NK G         + G+ DD  +G     E    +L GI+GAP  PP   K              XXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXXXXXXX  +  PP  GSL+ CN +L++ A  G G+ AA L+ RMR+  G + PT KSYTSAINAC NG                                     XXXXXXXXXX                                A  PKTG  +R+ M RGGGWR    ++D  +   GG  DG +G  P +P      EAA ALLREM  KGVAP S TYTLV+TACR DG PE+ALAVLREMQ+ A               E ++   + P        A+T  EE    ++GGD +V                          G                           V P++IHYS+VMSAFA+ PGGWK++L L++EME   + PN YTYN AI ACG+EG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                          PT+ AYT+A++AC  AGQWEVAIGLLREVT+GHA AA
Sbjct:  183 AAAGGPSLSFAEECRRALRRHAKRGEGEKAVALIARMREAG--LTPTERSYTSAINACRNG-TSQWKEALELLKEAQTAGGG-GITPNAFHYTGVLRACADAGQLDQIPPLKSEMASLGIAPGLSYYHGAMAAAK--------------GAENPTQGWETMKELVSEMSEKRVVPNQNTYRLVDEVRSGLGSSGSAEVNKGG-------IGVDGSKDDASNGRDVEAERLVSMLRGIDGAP--PPATAKTEGREQAKRRPKTPXXXXXXXXXXXX---------------XXXXXXXXXXXXXXXXXXXXXXXXXKEAGSPPALGSLQACNRDLRRYANRGAGEAAAELIGRMRK--GGVQPTAKSYTSAINACKNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXXXXXAASPKTGSEVRASMTRGGGWRAGEQQVDDVNSSSGGDDDGVNGLKPAAPSA---GEAAAALLREMSEKGVAPDSITYTLVITACREDGKPERALAVLREMQKLAS--------------EAEAEADVQPV-------AETVEEEAGVGEEGGDREVGKGSNHAGANDSGAP-----------GXXXXXXXXXXXXXXXXXXXXXXXXXGVVVPNVIHYSSVMSAFADHPGGWKYVLRLMKEMEVAGINPNAYTYNSAIRACGKEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATMMMK------------------------------------PTVAAYTAAVTACANAGQWEVAIGLLREVTNGHAVAA 885          
BLAST of mRNA_P-fluviatile_contig69.13421.1 vs. uniprot
Match: D8LFU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFU5_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 7.140e-75
Identity = 275/680 (40.44%), Postives = 337/680 (49.56%), Query Frame = 0
Query:  262 ELKQHVRLGRGEEAAALIARMRETGGEAGPTARNYTSAINACKNGDTAQWRQALDLLREVVAGGGXXGVTPDAYHYTAAMKACGRAKQWEQVSALRSEMESLGITPNLSYYHWAINVASRTGVDGKDSEGGATGGDIPRGWMAVKDLVAEMAEKEVTPQPLSYELVRKAKYRLQGPRSNANKSGDXXXXXXXEIQGAGDDVVDGG---LEWAYKVLGGIEGAPQPPPLAPKXXXXXXXXXXXXXXXXXXXXXXXXXAGVDNIGPALSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSADPPGSLEECNEELKKLARLGQGQEAAALVFRMRETGGALAPTLKSYTSAINACGNGSRVEWRQALALLREAAAAVPEKGDRGGDRVPPPNAFHXXXXXXXXXXAHQWKQIPPLLSEMESRGMCPPAEFYNWAIKMATMPKTGPRMRSLMIRGGGWR-VTTELDHGRGGGGSDGGDGDLPQSPQQLCGWE---AATALLREMVSKGVAPKSTTYTLVMTACRRDGVPEQALAVLREMQERAXXXXXXXXXXGEIGGEGDSAGGLPPSPADFGGGADTDREEGEEEDDGGDSDVXXXXXXXXXXXXXXXXXXXXXXXXXXGWGPRNIGPAYRQSPSRSQSLGWRRDAQVGPSLIHYSAVMSAFAEQPGGWKHILALVQEME 934
            +L++H + G GE+A ALIARMRE G    PT R+YTSAINAC+NG T+QW++AL+LL+E    GG  G+TP+A+HYT  ++AC  A Q +Q+  L+SEM SLGI+P LSYYH A+  A            GA      +GW  VK+LV+EM+EK V P   +Y LV + +  L    S    +G         + G+ D   DGG    E    +L GI+GAP  PP   K              XXXXXXXXXXX            XXXXXXXXXXXXXXXXXXXXXX         S    GSL+ CN +L++ A  G G  AA L+ RMR+ G  + PT KSYTSAINAC NG   +W +ALALLREA                      XXXXXXXXXX                                   PKTG  +R+ M RGGGWR V   +D  +    + GGD                 AA ALLREM  KGVAP S TYTLVMTACR DG PE+ALAVLREMQ+ A                         + AD G  A+T +EE     +GGD +V                             P    P                   V P++IHYS+VMSAFA+ PGGWKH+L L++EME
Sbjct:  288 DLRRHAKRGEGEKAVALIARMREAG--VMPTERSYTSAINACRNG-TSQWKEALELLKEAQTAGGG-GITPNAFHYTGVLRACADAGQLDQIPPLKSEMASLGISPGLSYYHGAMAAAK-----------GAA-----QGWKTVKELVSEMSEKRVVPSQNTYRLVDEVRSGLGSSSSAEVNNGGIG------VDGSKDGASDGGDVEAERLVSMLRGIDGAP--PPATTKTEGRERAKRRPKTPXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXKPRSKREAGSRPALGSLQACNRDLRRYADRGAGDAAAELIGRMRKDG--VQPTAKSYTSAINACKNGG--QWERALALLREAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXSPKTGGEIRASMTRGGGWRAVEQHVDDAKSNSSAGGGDXXXXXXXXXXXXXXXXXAAAALLREMSEKGVAPDSITYTLVMTACRVDGEPERALAVLREMQKLASETE---------------------AEADVGPVAETVQEEAGVGGEGGDREVGKGSSHDGANDSGASGSPAV---------PSPHPPRXXXXXXXXXXXXXXXXXVVVPNVIHYSSVMSAFADHPGGWKHVLRLMKEME 886          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig69.13421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG38_9PHAE1.800e-8641.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFU5_ECTSI7.140e-7540.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 742..803
e-value: 3.4E-9
score: 38.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 255..444
e-value: 2.1E-20
score: 75.3
coord: 892..1090
e-value: 3.3E-29
score: 104.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 568..724
e-value: 6.7E-14
score: 54.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 940..987
e-value: 3.1E-10
score: 40.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 752..793
e-value: 0.0053
score: 16.8
coord: 329..378
e-value: 5.3E-4
score: 20.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 943..977
e-value: 1.4E-8
score: 32.4
coord: 336..368
e-value: 3.6E-4
score: 18.5
coord: 767..794
e-value: 0.0017
score: 16.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 1034..1057
e-value: 0.31
score: 11.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 905..940
score: 8.254
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 333..367
score: 10.238
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 976..1006
score: 6.489
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 255..289
score: 6.467
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 601..633
score: 5.415
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 941..975
score: 13.11
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1031..1065
score: 6.939
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 564..598
score: 6.106
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 764..798
score: 8.868
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 649..683
score: 8.923
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 259..380
coord: 566..694
coord: 747..793
coord: 901..1058
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..1096

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig69contigP-fluviatile_contig69:465506..471940 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig69.13421.1mRNA_P-fluviatile_contig69.13421.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig69 464417..471940 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig69.13421.1 ID=prot_P-fluviatile_contig69.13421.1|Name=mRNA_P-fluviatile_contig69.13421.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1096bp
MPFRFKAAAGGTGARAFASRFSKRLALLSNHAGEDALSVAAAGGVAAARP
ALPAAVATVSRAATRRRTLGVGAAGPVRSSVTAAAAPTRRFAAAPAGVTP
MAVEQHDHRHRQRGVVVGRYRAVSNAVAPPGTVKVSGCSGRSRWRGLATT
PAMADADPVAEDAAQAEKAAGDLSGRGESATTSQPRPEGDARGRDPQHAV
VGGDCSGDQVAPFEKKGGAGVAAGADADADADASGGSGGGGSGSSSGDDS
SAPDPLARFNKELKQHVRLGRGEEAAALIARMRETGGEAGPTARNYTSAI
NACKNGDTAQWRQALDLLREVVAGGGGGGVTPDAYHYTAAMKACGRAKQW
EQVSALRSEMESLGITPNLSYYHWAINVASRTGVDGKDSEGGATGGDIPR
GWMAVKDLVAEMAEKEVTPQPLSYELVRKAKYRLQGPRSNANKSGDGGGG
GGGEIQGAGDDVVDGGLEWAYKVLGGIEGAPQPPPLAPKKSASQWQQSQK
QGEEDGGGGDDGGGAGVDNIGPALSSSSSPSPDASQSSDSDKKQTAPAAP
AAAAATTSADPPGSLEECNEELKKLARLGQGQEAAALVFRMRETGGALAP
TLKSYTSAINACGNGSRVEWRQALALLREAAAAVPEKGDRGGDRVPPPNA
FHYTAAIKACGNAHQWKQIPPLLSEMESRGMCPPAEFYNWAIKMATMPKT
GPRMRSLMIRGGGWRVTTELDHGRGGGGSDGGDGDLPQSPQQLCGWEAAT
ALLREMVSKGVAPKSTTYTLVMTACRRDGVPEQALAVLREMQERAAAAAA
AAAAAGEIGGEGDSAGGLPPSPADFGGGADTDREEGEEEDDGGDSDVDGG
DARLDVSAAEMEAAAAAAAAAAAGWGPRNIGPAYRQSPSRSQSLGWRRDA
QVGPSLIHYSAVMSAFAEQPGGWKHILALVQEMEAGDVPPNVYTYNKAIV
ACGREGQWAEAVALFRRMSRRGVSPDSASFLAAIQACGRGQQWALAVALL
REMSPATNTTASKTDGKAAAVAAVPTVSAPTIEAYTSAISACGYAGQWEV
AIGLLREVTDGHAAAAAAAAAAATDVGVAADLATAGDGAAAGGDAW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat