prot_P-fluviatile_contig69.13385.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig69.13385.1
Unique Nameprot_P-fluviatile_contig69.13385.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1128
Homology
BLAST of mRNA_P-fluviatile_contig69.13385.1 vs. uniprot
Match: A0A6H5L6Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y7_9PHAE)

HSP 1 Score: 613 bits (1582), Expect = 2.540e-194
Identity = 458/1010 (45.35%), Postives = 528/1010 (52.28%), Query Frame = 0
Query:   48 LALVYHPRFEGRQRYGFSAFSIPCPELDSTLMDLQRFPGKADDFVEFARKGLKYLTADDSREHLVKCAVGGDSNTISSIAWSPRG-------------------------------CAWDGGCLLSVTTSLHTVAVFQPPRQSPFAMEWEPLVSVSSALVEWGLRTCPT-----DGAETFRTFLGLSGGVSSRCGGXXXXXXXXXXXXXXXXXXXXFALTGLWAVARAARTRAVAWMGMRARVTNFGGGCRGGISGGXXXXXXXXXEDFTLLALAGEFVITLWTFSASAGAAVGEEAGEEAEDVKGQSLGLVKERPAWAGDLRALGARVADGEVKALAWCHEVGGCCGSGASPPSXXXXXXXXXXXXLSRAPAHDFLAVGTSTGAVFVLKVDIGSTTGGGAGSGVRGDGR-THLNSG----NAPA----------VRAVPFRRVCSPDGSPVTFLAFTVPGQDVGGRTQLSRGSGGDGERAEERGLAEEDAPPLAVAKGAIVSLFPRVV-------------DPAAADTTAAAVVAGAVGAAGAALPTLXXXXXXXXXXXXXXXPVRPPSFPAAPHGGQPAAVTWQAHDHNVAGISTVPFPGPVSSAAA-------RFSALNLPCCDPSGTEASRGVG-----GARAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRRRASGLSSGVWSTSLMYTCSIDGSCKEWEVATAAPPTAAAAGRAGPGRDGVEDMTKIRLRKMVSGDPRRASAPQRLRTPAPLLGCSASPNGVLVAFLEFCRPERSSRKAVQHIARKATHCRIVLAPMVPPATELAATAEGGRDSSWNFALARGALSTDWAWYLRAAALGDVAVHCSRESVGSFALLPTLSLALEDALSIATAAAAAVAENTSERRQKVGSATQSRPLYKVTPAAAPGGRGGI---------GNGGSTISGSTRVCCNSGGSSLGCQSSAARLMWDLLRLHHLLVTTTASVARCQVAVIEPPIAEGTDG 972
            + L+Y PRFEGR RY F+AFS+ CP++D T++DLQRFPGK  D VEFARKGLKYL ADD  +HL KC+VGGDSNTIS +AWSPRG                               CAWDGGCLL V + LH V VFQPP+ SP  MEWEPL +VSSAL+ WGLR CPT     D  +         GG                           FAL GLWAVARA RTRAVAWM  R  +T   GG      G            FTLLA+AG+FV+TLWTFS+     +G+E GEE E   G+SLGL++ERPAWAGDLR +G    DG V+ALAWCHE      S ++PPS              R P  DFLA+G S GAV VL VDIG+     A + V       H+++G    +APA          V AVP RRVC  DGSPVTFLAF VP                                 LAVAKGA+VSLFP V               PA   TT A V A      G A                   P  P  F A P G QPAAVTW+AHDHNV GISTVPF  P+SS A+                  P     + G G     G + GXXXXXXXXXXXX        XXXXXXX      XXXXXXXXX         SG  +T+L+YTCS+DGSC+EWEV  A  P      R G GR+G     K RLRK VS   +R      L+ P PLLGCSASPNGVLVA LEFCRPERS+RKAVQ+ ARK THCR+VL PM+PPA E AAT  GGRDSSWNF L+ G L TDWAWY+RAA LGD  VH +RE +  F+L+PT+  ALEDA+  A  AA         R+     AT+SRP  K T  A                  N                       S    L+WDLLRLHH+ + T ASVA CQ  V  PP+A+  DG
Sbjct:    1 MVLLYQPRFEGRDRYDFTAFSVACPDVDRTILDLQRFPGKVGDAVEFARKGLKYLAADDP-DHLEKCSVGGDSNTISGMAWSPRGGSGVASRSRRWCWLVLVLIMGVVSVGDDEGGCAWDGGCLLCVVSCLHAVTVFQPPKDSPDGMEWEPLATVSSALLHWGLRVCPTESLSLDHNDXXXXXXXXDGG---------------------------FALKGLWAVARATRTRAVAWMDRRLSLTAGSGG-----GGDRLDVGQDGGGAFTLLAMAGDFVVTLWTFSSET-TPIGDEEGEEQEG--GRSLGLLRERPAWAGDLRRMGTSGGDGNVRALAWCHE------SVSTPPSGGYHNGAAASFSPPR-PTRDFLAIGMSAGAVLVLAVDIGTNADAVAAAAVESPASLAHVDAGGGGSSAPARVRSGGITAAVTAVPLRRVCVSDGSPVTFLAFVVPRSA------------------------------LAVAKGAMVSLFPLVTATASNIHNQQDNQHPATEPTTTARVTAAXXXXEGLAA----------SGPAREATPSLPRRFAATPDGRQPAAVTWRAHDHNVTGISTVPFAAPMSSTASPPXXXXXXXXXXXXXXXXPGAPPTAVGNGKHRQDGEKGGXXXXXXXXXXXXGDAGAGRDXXXXXXXAERARVXXXXXXXXXXXXXXXCRRSGGRATALVYTCSMDGSCREWEVEVAVSP---GGDRGGGGREGA---AKARLRKTVSRMTKRGEQ-SPLKNPPPLLGCSASPNGVLVASLEFCRPERSTRKAVQNTARKGTHCRVVLTPMMPPAAERAATVTGGRDSSWNFPLSSGVLLTDWAWYIRAAILGDAVVHSTREDITPFSLIPTVRNALEDAILKAAEAA---------RQGAPTGATRSRPRLKTTTEAXXXXXXXXXXNDVLPKASNXXXXXXXXXXXXXXXXXXXXXXSSRTPALLWDLLRLHHVFLATAASVAGCQADVHVPPVADNGDG 911          
BLAST of mRNA_P-fluviatile_contig69.13385.1 vs. uniprot
Match: D7FKE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE4_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 5.910e-105
Identity = 276/597 (46.23%), Postives = 316/597 (52.93%), Query Frame = 0
Query:  280 FTLLALAGEFVITLWTFSASAGAAVGEEAGEEAEDVKGQSLGLVKERPAWAGDLRALGARVADGEVKALAWCHEVGGCCGSGASPPSXXXXXXXXXXXXLSRAPAHDFLAVGTSTGAVFVLKVDIGSTTGGGAGSGVRGDGR-THLNSG----NAPA----------VRAVPFRRVCSPDGSPVTFLAFTVPGQDVGGRTQLSRGSGGDGERAEERGLAEEDAPPLAVAKGAIVSLFPRVVD-------------PAAADTTAAAVVAGAVGAAGAALPTLXXXXXXXXXXXXXXXPVRPPSFPAAPHGGQPAAVTWQAHDHNVAGISTVPFPGPVSSAAARFSALNLPCCDP-------SGTEASRGVGGARAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRRRASGLS-----SGVWSTSLMYTCSIDGSCKEWEVATAAPPTAAAAGRAGPGRDGVEDMTKIRLRKMVSGDPRRASAPQRLRTPAPLLGCSASPNGVLVAFLEFCRPERSSRKAVQHIARKATHCRIVLAPMVPPATELAATAEGGRDSSWNFALARGALSTDWAWYLRAAALGDVAV 836
            FTLLA+AG+FVITLWTFS+      GEE GEE E   G+SLGLV+ERPAWAGDLR++G R  DG V+ALAWCHE      S ++ PS              R P  DFLA+G S G V VL VDIG+     A + V       H+++G    +APA          V AVP RRVC  DGSPVTFLAF VP     G     +G  GD   +  R         LAV+KGA+VSLFP V               PA   T  A   AG   A G A                   P R   F A P G QPAAV W+AHDHNV GISTVPF  PVS+ A+  S                +    + G G  R G   XXXXXXX                    XXXX    XXXX              SG  +T++MYTCS+DGSC+EWEV  A  P       A   R+G     K RLRK VS   +R      L+ P PLLGCSASPNGVLVA LEFCRPERS+RKAVQ+ ARK THCR+VL PM+PPA E AAT  GGRDSSWNF L+ G L TDWAWY+RAA LGD AV
Sbjct:   28 FTLLAMAGDFVITLWTFSSET-KRTGEEQGEEEEG--GRSLGLVRERPAWAGDLRSMGTRGGDGNVRALAWCHE------SVSASPSGGYDNVTAASSSPPR-PTRDFLAIGMSAGTVLVLAVDIGTDADAMAAAAVESPASLAHVDAGGGGSSAPARVRSGGITAAVTAVPLRRVCVSDGSPVTFLAFVVPRSGRWGAGSSEQGDSGDSPPSSPRAA-------LAVSKGAMVSLFPLVTATASNILDQQDNQLPATGPTATARATAGTTTAEGLAA--------SGPAREATPSPTR--RFAATPDGRQPAAVAWRAHDHNVTGISTVPFAAPVSNTASTPSLAGTSXXXXXXXXXGQAAPTTAVGNGKHRQGGEGXXXXXXXSDVATSVGDAGAGRDGSSRGXXXXRARVXXXXXXXXXXXXXXXCRRSGGRATAVMYTCSMDGSCREWEVEVAVSPEGXXXXXA---REGA---AKARLRKTVSRLTKRGQQ-SPLKNPPPLLGCSASPNGVLVASLEFCRPERSTRKAVQNTARKGTHCRVVLTPMIPPAAERAATVTGGRDSSWNFPLSSGVLLTDWAWYIRAAILGDAAV 590          
BLAST of mRNA_P-fluviatile_contig69.13385.1 vs. uniprot
Match: A0A2P6TYR3_CHLSO (Transducin WD40 repeat-like superfamily n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TYR3_CHLSO)

HSP 1 Score: 71.2 bits (173), Expect = 1.290e-8
Identity = 49/151 (32.45%), Postives = 68/151 (45.03%), Query Frame = 0
Query:   27 PTTVDCIKWAQDGRLAVNLGSLALVYHPRFEGRQRYGFSAFSIPCPELDSTLMDLQRFPGKADDFVEFARKGLKYLTADDSREHLVKCAVGGDSNTISSIAWSPRGCAWDGGCLLSVTTSLHTVAVFQPPRQSPFAMEWEPLVSVSSALVE 177
            P   DC+KW++DG LAV  G  A++  P        G  AF+ P    D  ++     P K     E A   L +L A            G       S+AWSP GC+   GCLL+V T+ H V V+ PP +     EW+ +  +S  L+E
Sbjct:   17 PLGADCVKWSEDGVLAVAAGHSAVLLRPG----DLTGPRAFASPGGMCDPEVLQAPGRPAKP---TEDAHHELAHLRAAAMVSQYPSLQAG---LAARSLAWSPAGCSAAAGCLLAVVTNDHQVLVYGPPAKP--CSEWQLVAHLSGQLLE 155          
BLAST of mRNA_P-fluviatile_contig69.13385.1 vs. uniprot
Match: A0A836CAE1_9STRA (TFIIIC_delta domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAE1_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.270e-7
Identity = 52/172 (30.23%), Postives = 74/172 (43.02%), Query Frame = 0
Query:   17 EVELDRPGYHPTTVDCIKWAQDGRLAVNLGSLALVYHPRFEG--------------RQRYGFSAFSIPCPELDSTLMDLQRFPGKADDFVEFARKGLKYLTADDSREHLVKCAVGGDSNTISSIAWSPRGCAWDGGCLLSVTTSLHTVAVFQPPRQSPFAMEWEPLVSVSSA 174
            E+ L  P   P   + I WA DGRLA+     A ++    +G                RY   A      EL+ T    Q F G   D         +  + D   E++V           ++ AWSP GCAWDGGCLL++  ++H + V+ PPR +     W PL+S+S A
Sbjct:   67 EITLVEPLELPARPNGITWAPDGRLAIINDEWAYIFTVSCQGPAALAADGQGLVENTHRYAIRA------ELELTTW--QAFVGPIRDHAG------RLPSLDTLIENVVLWKP-----AFTAAAWSPVGCAWDGGCLLALLDNVHCLRVYAPPRDAA-QFSWSPLLSISDA 218          
BLAST of mRNA_P-fluviatile_contig69.13385.1 vs. uniprot
Match: A0A4D9CTE4_9STRA (TFIIIC_delta domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTE4_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 6.150e-6
Identity = 49/151 (32.45%), Postives = 66/151 (43.71%), Query Frame = 0
Query:   26 HPTTVDCIKWAQDGRLAVNLGSLALVYHPRFEGRQRYGFSAFSIPCPELDSTLMDLQRFPGKADDFVEFARKGLKYLTADDSREHLVKCAVGGD--SNTISSIAWSPRGCAWDGGCLLSVTTSLHTVAVFQPPRQSPFAMEWEPLVSVSSA 174
            HP   D I+WA DGRLAV L +   +     E  + Y      +P          +     KAD   +  R  + Y+    S E     A  GD  S     + WSPR CAW+GGCLL+  ++   V V++PPR S  A  W     V+ A
Sbjct:   29 HP---DAIRWAVDGRLAVLLANQVEICQYVGEEVEPYFRYRIILPGGRQQGDRKPVDVGVMKADGMYQ-DRDAMVYVLGRSSAE-----AASGDDLSPMFCGLDWSPRACAWEGGCLLATLSTDARVEVWEPPR-STRACSWVRAEDVTDA 169          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig69.13385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L6Y7_9PHAE2.540e-19445.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKE4_ECTSI5.910e-10546.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2P6TYR3_CHLSO1.290e-832.45Transducin WD40 repeat-like superfamily n=1 Tax=Ch... [more]
A0A836CAE1_9STRA2.270e-730.23TFIIIC_delta domain-containing protein n=1 Tax=Tri... [more]
A0A4D9CTE4_9STRA6.150e-632.45TFIIIC_delta domain-containing protein n=1 Tax=Nan... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024761Transcription factor IIIC, 90kDa subunit, N-terminalPFAMPF12657TFIIIC_deltacoord: 27..176
e-value: 9.6E-11
score: 41.9
NoneNo IPR availablePANTHERPTHR15496GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 4 FAMILYcoord: 28..177
NoneNo IPR availablePANTHERPTHR15496:SF2GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 4coord: 28..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig69contigP-fluviatile_contig69:77097..92466 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig69.13385.1mRNA_P-fluviatile_contig69.13385.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig69 75499..92506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig69.13385.1 ID=prot_P-fluviatile_contig69.13385.1|Name=mRNA_P-fluviatile_contig69.13385.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1128bp
MESFMDDSVDLTSNITEVELDRPGYHPTTVDCIKWAQDGRLAVNLGSLAL
VYHPRFEGRQRYGFSAFSIPCPELDSTLMDLQRFPGKADDFVEFARKGLK
YLTADDSREHLVKCAVGGDSNTISSIAWSPRGCAWDGGCLLSVTTSLHTV
AVFQPPRQSPFAMEWEPLVSVSSALVEWGLRTCPTDGAETFRTFLGLSGG
VSSRCGGGGGGGGEGSGIGYGCGDGDGFALTGLWAVARAARTRAVAWMGM
RARVTNFGGGCRGGISGGGGGDYGGGGEDFTLLALAGEFVITLWTFSASA
GAAVGEEAGEEAEDVKGQSLGLVKERPAWAGDLRALGARVADGEVKALAW
CHEVGGCCGSGASPPSPSSSVSSSSSSSLSRAPAHDFLAVGTSTGAVFVL
KVDIGSTTGGGAGSGVRGDGRTHLNSGNAPAVRAVPFRRVCSPDGSPVTF
LAFTVPGQDVGGRTQLSRGSGGDGERAEERGLAEEDAPPLAVAKGAIVSL
FPRVVDPAAADTTAAAVVAGAVGAAGAALPTLAAEVAAGPAAGATAAPVR
PPSFPAAPHGGQPAAVTWQAHDHNVAGISTVPFPGPVSSAAARFSALNLP
CCDPSGTEASRGVGGARAGGGEGGGWAAVVGEKRRRQGEDDGGDDSGGDG
DGGGGGGGGSGMRRRASGLSSGVWSTSLMYTCSIDGSCKEWEVATAAPPT
AAAAGRAGPGRDGVEDMTKIRLRKMVSGDPRRASAPQRLRTPAPLLGCSA
SPNGVLVAFLEFCRPERSSRKAVQHIARKATHCRIVLAPMVPPATELAAT
AEGGRDSSWNFALARGALSTDWAWYLRAAALGDVAVHCSRESVGSFALLP
TLSLALEDALSIATAAAAAVAENTSERRQKVGSATQSRPLYKVTPAAAPG
GRGGIGNGGSTISGSTRVCCNSGGSSLGCQSSAARLMWDLLRLHHLLVTT
TASVARCQVAVIEPPIAEGTDGLGDAGDDTDVDDDDDDDDDGGGDDDDDD
EDEDEEGGDGDDEDDGDDGGDASGSGGDRGGSSGGSRKGKGKPAQGGRRR
RRESECEEAGAALRRSIAPPPLPPQLAALPPSAEVSRPAILSSRASRVPN
ARPQHRAGAAGALRSTRPPSRSALRRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024761TFIIIC_delta_N