prot_P-fluviatile_contig68.13368.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig68.13368.1
Unique Nameprot_P-fluviatile_contig68.13368.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1247
Homology
BLAST of mRNA_P-fluviatile_contig68.13368.1 vs. uniprot
Match: D7G3I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I5_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 7.210e-108
Identity = 289/680 (42.50%), Postives = 374/680 (55.00%), Query Frame = 0
Query:  399 TGTHARRHAMVIEAMAVAAGISGNNFSVGQEEDGEKEKKGGGEEEDTFPWAVGINFEEGDEEDEDALPPESDADRFSLFGFGRTPRFLPQP---KIVPNGAHFEWAEVDLKNPLKPHLSLMDRLAGMGAPLPGMPPPS---MTGSSTEDNGG----------GDGEDSLYDVPYADAG-AAVGGSSSAMSDXXXXXXXXXXXXXXXXXXXXXG-------------RAKGLVTDADRAEGQGHWTSIMNNAGKVESIELEPVKRAGAGA-----------GSRAAXXXXXXXXX--KPMKEFPEGSGKMVLDELAYQRMYPGDAKVNMKHFKMKHASAVSAVFEFCAAMQPKARPIFEFEGGEKMEK-APFSLFVSVNGVGYSPATAKSIKLAKQLASINFLREAMGTREQLDLESLIAQTGGDEC--KAAVAAAISKQK---------------RGEQSGGGEGAEGAXXXXXXXX-------EEGATADPGRGKGATNFTQLLHDLSNALPETPTYASYKFGGESSRKKAATQKQNHVNKKVFRCDVKLLYHKIDPAKEALRMKEEADKKVADDKATAAAEANPESEELKKAAVDAHKAYTTCRAKPIISISDLTAHGYGPSKRDAKHKAAEAMLHLLLPGCDGEAAMLAQAQSIINKHQTQKKARLQEEHKAAQEAK 1010
            +G  ARR A ++EA+A+AA    N                  E     PW +     EG EE  D +        ++  G  +  R LP+    K+  +GA FEW EVDL++PL  H  L+DRLAGMG PLPGMP PS   + GS+                    D+   VPYA++   A   SSS  S                      G             R    V++ DRA G GHWT++M++AG V+ IEL P KRA AGA           G+R+            KPMKEFP GSGKMVLDELA+ RMYPG A +NMK FK+K  SAVSA FE CAAM+PK+RP FE +  +  +  +PF+L VSVNGV YSPATAK+ KLAKQLASINFLREA+GTREQLDLESLIA+T G      AA+AAAIS+ K               +G +  GG      XXXXXXXX       ++   A    G G  N+ QLLHDL  A PETP YASY F    + K  A+Q+++ +  K FRC  +LL H +DP + A R + EA K   +  A A+   +PE+E LK+AA +AHK +   RA P +SI  L+A G G +KRDAKHKAA+ +++ L+P C  +  + +QA+ +I K+Q +KK R+++E KAAQEAK
Sbjct:  544 SGRAARRAAEIMEAVALAAEYRNNXXXXXXXXXXXXXXXXXXE---YSPWDMDS---EGGEESGDEV--------YAFAGRRQRRRLLPRSSARKVSHSGAEFEWGEVDLQDPLAEHKGLLDRLAGMGTPLPGMPAPSSGSVVGSARXXXXXXXXXXXXXXVASASDAADGVPYANSRHPATTQSSSESSASPNPNNMKRVKKKSKNGHASRGVYAPPPXXXAGPPRRPVAVSNVDRAAGVGHWTNLMHSAGNVDPIELNPAKRAAAGAVAAAPGKKGGEGARSVPPPPAPVVEPPKPMKEFPPGSGKMVLDELAHARMYPGGAVLNMKSFKLKQKSAVSAAFEMCAAMEPKSRPSFENKNKDAAKNISPFTLNVSVNGVAYSPATAKNTKLAKQLASINFLREAVGTREQLDLESLIAETTGGSLAGSAAIAAAISQGKPATGXXXXXXXXXXXKGSRGXGGXXXXXXXXXXXXXXXXXXXDNDDDPVAKHALGDGLQNYAQLLHDLVAAHPETPNYASYMF---RALKDNASQQKSKLTGKGFRCFARLLRHVVDPVETAKRKEVEAAKSAIEVAAKASLGEDPENEALKEAAREAHKDFLKHRAIPKLSIGVLSAEGDGANKRDAKHKAAQGLMYALMPKCKTDEDLRSQAKVVIEKYQAEKKVRMEKEQKAAQEAK 1206          
BLAST of mRNA_P-fluviatile_contig68.13368.1 vs. uniprot
Match: A0A6H5KRH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH2_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 2.150e-38
Identity = 158/452 (34.96%), Postives = 201/452 (44.47%), Query Frame = 0
Query:  315 AAPTNRSTGTL--GRYELSSDSEFESGSSSFSAPCSASS-DSDVS--------------------------HGSFDVKEYNNVFAAKAAGDDGDSDVYGLGGLGLPNPLEAWSTG----THARRHAMVIEAMAVAAGISGNNFSVGQEEDGEKEKKGGGEEEDTFPWAVGINFEEGDEEDEDALPPESDADRFSLFGFGRTPRFLPQP---KIVPNGAHFEWAEVDLKNPLKPHLSLMDRLAGMGAPLPGMPPPS---MTGSSTEDNGG----------GDGEDSLYDVPYADA-GAAVGGSSSAMSDXXXXXXXXXXXXXXXXXXXXXG-------------RAKGLVTDADRAEGQGHWTSIMNNAGKVESIELEPVKRAGA---------------GAGSRAAXXXXXXXXXKPMKEFPEGSGKMVLDELAYQRMYPGDAKVNMKHFKM 688
            A+PT   TG+L  GRY++SS  + E  SS+ +A  S+ S + D++                            SFDV+EY N FAAKA    G       GGLGLPNPL     G      ARR A ++EA+A+ A    N                 G      PW +     EG E+  D +        ++  G  +  R LP+    K+  +GA FEWAEVDL++PL  H  L+DRLAGMG PLPG+P PS   + GS+                    D+   VPYA++   A   SSS  S                      G             R    V+D DRA G GHWT++M++AG V+ IEL P KRA A                A S  A         KPMKEFP GSGKMVLDELA+ RMYPG A +NMK FK+
Sbjct:  840 ASPTPSPTGSLPLGRYDVSSSDDDEPFSSAVAAGDSSRSLEIDLASAAAAGRYDXXXXDCRSSXXXXXXXTESSFDVQEYTNFFAAKAIDGSG-------GGLGLPNPLAVVPAGGPRGRAARRAAEIMEAVALVAEYRNNRXXXXXXXXXXXXXXXEG----YSPWDIDS---EGGEDSGDEV--------YTFAGRRQRRRLLPRSSARKVWHSGAEFEWAEVDLEDPLAAHKGLLDRLAGMGTPLPGVPAPSSGSVVGSARXXXXXXXXXXXXXSVASASDAADGVPYANSLHPATTHSSSESSASPNPNNIKRVKKKSKKGHASRGVYAPXXXXXXXXXRRPVAVSDVDRAAGVGHWTNLMHSAGNVDPIELNPTKRAAAEAXXXXXXXXXXXXXSARSVPAPPVPVVEPPKPMKEFPPGSGKMVLDELAHARMYPGGAVLNMKSFKV 1269          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig68.13368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3I5_ECTSI7.210e-10842.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRH2_9PHAE2.150e-3834.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 989..1029
NoneNo IPR availableCOILSCoilCoilcoord: 1..44
NoneNo IPR availableGENE3D3.30.160.20coord: 685..762
e-value: 1.1E-5
score: 27.4
NoneNo IPR availableGENE3D3.30.160.20coord: 908..994
e-value: 1.0E-6
score: 30.6
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 941..970
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 687..758
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 889..971
e-value: 0.045
score: 18.0
coord: 693..760
e-value: 0.35
score: 9.7
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 948..972
score: 9.295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig68contigP-fluviatile_contig68:648949..660942 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig68.13368.1mRNA_P-fluviatile_contig68.13368.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig68 646783..661076 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig68.13368.1 ID=prot_P-fluviatile_contig68.13368.1|Name=mRNA_P-fluviatile_contig68.13368.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1247bp
MAAAQAKARAAELQRATAKAQKEAEEAIRAMSEELRRMEEVEKAVERGGG
DEPAHGPETCTMDEERYCAERERSPLLARDDVSSSEGSGDSYSADDSEQE
GAWGHGYTGAIPMEEDEGEPAEHDGLSSPGPGRYDVSSSEDDGNSTGGGD
SNTAADVRRARNVILTPSEHGWSAGGQESAGDERGSWKDDDSPSIGRYDV
SASEQEEEVNENDGPGRGGGGSSLESGSSPADALDVTAWSSPAESLPPGR
YDVSASSSFSSDHGDIDGGSNDDDGEEKGSNDGFGGRGWSPGTNAWIPAA
TGEKKAFNAAAAAVAAPTNRSTGTLGRYELSSDSEFESGSSSFSAPCSAS
SDSDVSHGSFDVKEYNNVFAAKAAGDDGDSDVYGLGGLGLPNPLEAWSTG
THARRHAMVIEAMAVAAGISGNNFSVGQEEDGEKEKKGGGEEEDTFPWAV
GINFEEGDEEDEDALPPESDADRFSLFGFGRTPRFLPQPKIVPNGAHFEW
AEVDLKNPLKPHLSLMDRLAGMGAPLPGMPPPSMTGSSTEDNGGGDGEDS
LYDVPYADAGAAVGGSSSAMSDVSSRMSSKPDNQRAKKKARKTGRAKGLV
TDADRAEGQGHWTSIMNNAGKVESIELEPVKRAGAGAGSRAASAASAPEP
PKPMKEFPEGSGKMVLDELAYQRMYPGDAKVNMKHFKMKHASAVSAVFEF
CAAMQPKARPIFEFEGGEKMEKAPFSLFVSVNGVGYSPATAKSIKLAKQL
ASINFLREAMGTREQLDLESLIAQTGGDECKAAVAAAISKQKRGEQSGGG
EGAEGAGEAAAGDGEEGATADPGRGKGATNFTQLLHDLSNALPETPTYAS
YKFGGESSRKKAATQKQNHVNKKVFRCDVKLLYHKIDPAKEALRMKEEAD
KKVADDKATAAAEANPESEELKKAAVDAHKAYTTCRAKPIISISDLTAHG
YGPSKRDAKHKAAEAMLHLLLPGCDGEAAMLAQAQSIINKHQTQKKARLQ
EEHKAAQEAKALREAAKAAKERAREARKTRNAEAIHEAEAEAIAAGAAVG
KSADAVVQAIAQPAQSRYDVAMKQALEAAAKKIREDAEAAAAGGADGAGD
GDGAGTADGGVAGAGAGAGAGAGAREAAGGDGAGCARVTAREDQPPAISP
YSSAVTPTTAGAGAAGAAALVPDTPPSAVDRGAAGAAGVTPNVGPTGGYL
REDTRGSSRAAAVAAPAPAAASGGGGDSEEEEDEEEEGEEEEKVEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014720dsRBD_dom