prot_P-fluviatile_contig66.13183.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig66.13183.1
Unique Nameprot_P-fluviatile_contig66.13183.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length79
Homology
BLAST of mRNA_P-fluviatile_contig66.13183.1 vs. uniprot
Match: D8LQX3_ECTSI (AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQX3_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 8.380e-37
Identity = 70/78 (89.74%), Postives = 72/78 (92.31%), Query Frame = 0
Query:    1 MDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKARSRERVYNILDEFILSGEVEESSKREILERIRELEKLD 78
            MDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNK      VYNILDEFILSGEVEESSKREIL+RIRE+EKLD
Sbjct:   72 MDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNK------VYNILDEFILSGEVEESSKREILDRIREVEKLD 143          
BLAST of mRNA_P-fluviatile_contig66.13183.1 vs. uniprot
Match: A0A835YZE0_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZE0_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.850e-33
Identity = 64/78 (82.05%), Postives = 71/78 (91.03%), Query Frame = 0
Query:    1 MDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKARSRERVYNILDEFILSGEVEESSKREILERIRELEKLD 78
            +DVNDNELLALETVHLFVELL+SYFSNVCELDIVFNFNK      VYNILDEFILSGEV+ES+K EIL+R+RELEKL+
Sbjct:   72 VDVNDNELLALETVHLFVELLDSYFSNVCELDIVFNFNK------VYNILDEFILSGEVQESAKPEILDRVRELEKLE 143          
BLAST of mRNA_P-fluviatile_contig66.13183.1 vs. uniprot
Match: A0A7S2CS13_9STRA (AP complex subunit sigma n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CS13_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.340e-29
Identity = 57/78 (73.08%), Postives = 68/78 (87.18%), Query Frame = 0
Query:    1 MDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKARSRERVYNILDEFILSGEVEESSKREILERIRELEKLD 78
            +DVNDNELL LET+HLFVELL+ YFSNVCELDIVFNFNK      VY ILDEFIL+GE++E+SK+EILERI+E+EK +
Sbjct:   75 IDVNDNELLYLETIHLFVELLDQYFSNVCELDIVFNFNK------VYGILDEFILAGEIQETSKKEILERIKEVEKRE 146          
BLAST of mRNA_P-fluviatile_contig66.13183.1 vs. uniprot
Match: A0A482SEH0_9ARCH (Clat_adaptor_s domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEH0_9ARCH)

HSP 1 Score: 106 bits (265), Expect = 1.510e-28
Identity = 54/77 (70.13%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    2 DVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKARSRERVYNILDEFILSGEVEESSKREILERIRELEKLD 78
            DV DNELL +ET+H+FVELL+ YFSNVCELDIVF+FNK      VY +LDEFIL+GE++E+SKR ILER+RELEKL+
Sbjct:   16 DVTDNELLLMETIHIFVELLDVYFSNVCELDIVFHFNK------VYTLLDEFILAGEIQETSKRVILERVRELEKLE 86          
BLAST of mRNA_P-fluviatile_contig66.13183.1 vs. uniprot
Match: A0A7S3L6S1_9STRA (AP complex subunit sigma n=2 Tax=Bacillariophycidae TaxID=33850 RepID=A0A7S3L6S1_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.050e-28
Identity = 55/78 (70.51%), Postives = 68/78 (87.18%), Query Frame = 0
Query:    1 MDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKARSRERVYNILDEFILSGEVEESSKREILERIRELEKLD 78
            +DV DNEL  LET+HLFVELL+SYFSNVCELDIVFNFNK      VY+ILDEF+L+GE+EE+SKREIL+R++ LEK++
Sbjct:   82 VDVTDNELSYLETIHLFVELLDSYFSNVCELDIVFNFNK------VYSILDEFMLAGELEETSKREILDRVKMLEKME 153          
BLAST of mRNA_P-fluviatile_contig66.13183.1 vs. uniprot
Match: A0A6T8NVY6_9STRA (AP complex subunit sigma n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8NVY6_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.490e-28
Identity = 55/78 (70.51%), Postives = 67/78 (85.90%), Query Frame = 0
Query:    1 MDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKARSRERVYNILDEFILSGEVEESSKREILERIRELEKLD 78
            +D+ DNEL  LET+HLFVELL+SYFSNVCELDIVFNFN      RVY ILDEF+L+GE+EE+SKREILER++ +EK+D
Sbjct:   85 VDMTDNELNYLETIHLFVELLDSYFSNVCELDIVFNFN------RVYAILDEFMLAGEIEETSKREILERVKVIEKMD 156          
BLAST of mRNA_P-fluviatile_contig66.13183.1 vs. uniprot
Match: A0A7S0FJC4_9STRA (AP complex subunit sigma n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FJC4_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.330e-27
Identity = 54/78 (69.23%), Postives = 67/78 (85.90%), Query Frame = 0
Query:    1 MDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKARSRERVYNILDEFILSGEVEESSKREILERIRELEKLD 78
            +D+ DNEL  LET+HLFVELL+SYFSNVCELDIVFNFN      RVY ILDE+IL+GE+EE+SK+EIL+R++ LEKL+
Sbjct:   79 VDITDNELSYLETIHLFVELLDSYFSNVCELDIVFNFN------RVYMILDEYILAGEIEETSKKEILDRVKVLEKLE 150          
BLAST of mRNA_P-fluviatile_contig66.13183.1 vs. uniprot
Match: A0A1Z5K077_FISSO (AP complex subunit sigma n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K077_FISSO)

HSP 1 Score: 105 bits (263), Expect = 1.930e-27
Identity = 53/78 (67.95%), Postives = 69/78 (88.46%), Query Frame = 0
Query:    1 MDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKARSRERVYNILDEFILSGEVEESSKREILERIRELEKLD 78
            +DVNDNEL  LET+HLFVELL+SYF+NVCELDIVF+FNK      VY+ILDEF+L+GE+EE+SKREIL+R++ L+K++
Sbjct:   80 VDVNDNELSYLETIHLFVELLDSYFNNVCELDIVFHFNK------VYSILDEFMLAGEIEETSKREILDRVKLLDKME 151          
BLAST of mRNA_P-fluviatile_contig66.13183.1 vs. uniprot
Match: B8C940_THAPS (AP complex subunit sigma (Fragment) n=2 Tax=Thalassiosira TaxID=35127 RepID=B8C940_THAPS)

HSP 1 Score: 105 bits (261), Expect = 3.030e-27
Identity = 53/78 (67.95%), Postives = 68/78 (87.18%), Query Frame = 0
Query:    1 MDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKARSRERVYNILDEFILSGEVEESSKREILERIRELEKLD 78
            +DV DNEL  LE++HLFVELL+SYF+NVCELDIVFNFNK      VY+ILDE++L+GE+EE+SK+EIL+R++ LEKLD
Sbjct:   71 VDVQDNELSYLESIHLFVELLDSYFANVCELDIVFNFNK------VYSILDEYMLAGEIEETSKKEILDRVKFLEKLD 142          
BLAST of mRNA_P-fluviatile_contig66.13183.1 vs. uniprot
Match: A0A7S2A2C1_TRICV (AP-2 complex subunit sigma n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A2C1_TRICV)

HSP 1 Score: 107 bits (267), Expect = 3.410e-27
Identity = 55/78 (70.51%), Postives = 68/78 (87.18%), Query Frame = 0
Query:    1 MDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKARSRERVYNILDEFILSGEVEESSKREILERIRELEKLD 78
            +DVNDNEL  LET+HLFVELL+SYFSNVCELDIVFNFNK      VY+ILDE++L+GE+ E+SKREILER++ LEK++
Sbjct:  157 VDVNDNELSYLETIHLFVELLDSYFSNVCELDIVFNFNK------VYSILDEYMLAGEIGETSKREILERVKVLEKVE 228          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig66.13183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQX3_ECTSI8.380e-3789.74AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YZE0_9STRA1.850e-3382.05AP complex subunit sigma n=1 Tax=Tribonema minus T... [more]
A0A7S2CS13_9STRA1.340e-2973.08AP complex subunit sigma n=1 Tax=Dictyocha speculu... [more]
A0A482SEH0_9ARCH1.510e-2870.13Clat_adaptor_s domain-containing protein n=1 Tax=a... [more]
A0A7S3L6S1_9STRA5.050e-2870.51AP complex subunit sigma n=2 Tax=Bacillariophycida... [more]
A0A6T8NVY6_9STRA5.490e-2870.51AP complex subunit sigma n=1 Tax=Proboscia inermis... [more]
A0A7S0FJC4_9STRA1.330e-2769.23AP complex subunit sigma n=1 Tax=Minutocellus poly... [more]
A0A1Z5K077_FISSO1.930e-2767.95AP complex subunit sigma n=1 Tax=Fistulifera solar... [more]
B8C940_THAPS3.030e-2767.95AP complex subunit sigma (Fragment) n=2 Tax=Thalas... [more]
A0A7S2A2C1_TRICV3.410e-2770.51AP-2 complex subunit sigma n=1 Tax=Trieres chinens... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 74..78
NoneNo IPR availableGENE3D3.30.450.60coord: 1..78
e-value: 6.9E-22
score: 79.7
NoneNo IPR availablePANTHERPTHR11753:SF44AP-2 COMPLEX SUBUNIT SIGMAcoord: 2..78
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 1..77
e-value: 1.4E-21
score: 76.9
IPR016635Adaptor protein complex, sigma subunitPANTHERPTHR11753CLATHRIN COAT ASSEMBLY PROTEINcoord: 2..78
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 2..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig66contigP-fluviatile_contig66:86348..87771 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig66.13183.1mRNA_P-fluviatile_contig66.13183.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig66 86126..89552 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig66.13183.1 ID=prot_P-fluviatile_contig66.13183.1|Name=mRNA_P-fluviatile_contig66.13183.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=79bp
MDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKARSRERVYNIL
DEFILSGEVEESSKREILERIRELEKLD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022775AP_mu_sigma_su
IPR016635AP_complex_ssu
IPR011012Longin-like_dom_sf