prot_P-fluviatile_contig63.12980.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig63.12980.1
Unique Nameprot_P-fluviatile_contig63.12980.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length430
Homology
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BLAST of mRNA_P-fluviatile_contig63.12980.1 vs. uniprot
Match: A0A6H5JXB7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXB7_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 7.670e-46
Identity = 117/244 (47.95%), Postives = 141/244 (57.79%), Query Frame = 0 
Query:  196 CFDLNPTSQEKFIRIPDPITGTTPASACWRIPNAVGSTLGFSFRNATFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVV------LFTSAVVTITFDAANTTLDRGITIAYTRNINQQVSTSFLFNSTLILLGFVWCGVTFARLVCVHRARENALNGSSLADRRGGRGGDNTAGG---GGLGAATSSGPVGLTPAQIRSLEQVNEIPKLHRFGATIGAGNSGEDSADVEGGGTVEGAGKG 430
            C  L+P+++E  + I D  +       CW IPN  GSTL  SFR A FA                                        LF S+  T+ F A NTT +R + +AY R ++Q +S+SFLFNSTL+LLGFVWCGVTFARLVCVHRARE+AL+G+ L+DRRGGRG D T  G    GLGAATS+GP GLTPAQIRSLEQ N +PK  RFG+ +  G       DVE G  V G GKG
Sbjct:  103 CETLDPSAEEDTLNI-DADSAGEGDEICWDIPNVDGSTLTISFRQADFAAGDELTVEDDGDTDVEYEEGRGLVLDGDVIEVGADGEARELFYSSTATVRFSATNTTAERMVVMAYKRTVDQ-ISSSFLFNSTLVLLGFVWCGVTFARLVCVHRARESALSGAHLSDRRGGRG-DQTGAGLTLTGLGAATSAGPAGLTPAQIRSLEQTNVLPKHRRFGSKLVGGGG---DMDVEKGWGVSGPGKG 340
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BLAST of mRNA_P-fluviatile_contig63.12980.1 vs. uniprot
Match: D7G6J3_ECTSI (Similar to ring finger protein 167 isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J3_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 3.620e-36
Identity = 86/122 (70.49%), Postives = 96/122 (78.69%), Query Frame = 0 
Query:  311 QVSTSFLFNSTLILLGFVWCGVTFARLVCVHRARENALNGSSLADRRGGRGGDNTAG--GGGLGAATSSGPVGLTPAQIRSLEQVNEIPKLHRFGATIGAGNSGEDSADVEGGGTVEGAGKG 430
            Q+STSFLFNSTLILLGFVWCGVTFARLVCVHRARE+AL+G+  +DRRGGRG    AG  G GLGAATS+GP GLTPAQIRSLEQ N +PK  RFG+ + AG  G+   DVE G  V G GKG
Sbjct:   20 QISTSFLFNSTLILLGFVWCGVTFARLVCVHRARESALSGAHFSDRRGGRGDQTGAGFTGTGLGAATSAGPAGLTPAQIRSLEQTNVLPKHRRFGSKL-AGGGGD--MDVEKGWGVGGPGKG 138
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig63.12980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXB7_9PHAE7.670e-4647.95RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G6J3_ECTSI3.620e-3670.49Similar to ring finger protein 167 isoform 1 n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 340..430
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 316..339
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..315
NoneNo IPR availableTMHMMTMhelixcoord: 316..338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig63contigP-fluviatile_contig63:256744..273068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig63.12980.1mRNA_P-fluviatile_contig63.12980.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig63 256744..273070 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig63.12980.1 ID=prot_P-fluviatile_contig63.12980.1|Name=mRNA_P-fluviatile_contig63.12980.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=430bp
PVTASHLASSQGARRKICISRLPHGAIDSREEKSEFLTPTHTGIKRVTLS
LSVALPSLEEGGHPINMRACVLILSVLAPREADLVHAAQPSHRQQRQHLL
RHEERAAGGKLRGFSTVAAATAAENEEVIHGRREERYSGLAPQQPEARRC
GGLRAAAATMAAATEEVLQRGRKLQSGGGGSGGAETANDLVAAENCFDLN
PTSQEKFIRIPDPITGTTPASACWRIPNAVGSTLGFSFRNATFAVGDTMN
FEAGGDTYPAETILNDAGVGDRNEADVVLFTSAVVTITFDAANTTLDRGI
TIAYTRNINQQVSTSFLFNSTLILLGFVWCGVTFARLVCVHRARENALNG
SSLADRRGGRGGDNTAGGGGLGAATSSGPVGLTPAQIRSLEQVNEIPKLH
RFGATIGAGNSGEDSADVEGGGTVEGAGKG
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