prot_P-fluviatile_contig62.12923.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig62.12923.1
Unique Name	prot_P-fluviatile_contig62.12923.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	217

Homology

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BLAST of mRNA_P-fluviatile_contig62.12923.1 vs. uniprot
Match: D7G0D5_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0D5_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 8.390e-122
Identity = 177/216 (81.94%), Postives = 191/216 (88.43%), Query Frame = 0

Query:    1 MKVTAAAAVASLGMASAFVTPGAFRAPAALNKAASSTTSLSMSSCDGMIGVSTEAGGSVFDPLGLAELHKINPQVNPHPKWLQESELKHCRICMLAFVGIAAAQAGVILPGLDYAAVPWYDQFNEFASKNPGGLAQLMLFFAVAEGATYCGDMWSGGGDRDAGDLGLYLKKPSQADVEKLRLQELKNGRLAMLSVAAFASEHWISGSVPLLAGQGF 216
            MKVTAAAAV SLGMASAFVTPGAFRAP A    ASS T LSMS+ DG +GVS EAGG+VFDPLGLAELH INP VNPHPKWLQE+E+KHCRICMLAFVGI AAQ+G + PGL Y AVPWYDQF+EFASKNPGGLAQLMLFFAVAEGATYCGD WSGGG+R+AGDLGLYLKKP +A VEKLRLQELKNGRLAM+SVAA ASEHWI G+VP L GQG+
Sbjct:    1 MKVTAAAAVCSLGMASAFVTPGAFRAPTASLSKASSKTPLSMSAVDGEVGVSLEAGGAVFDPLGLAELHSINPLVNPHPKWLQEAEIKHCRICMLAFVGIWAAQSGFVFPGLGYDAVPWYDQFHEFASKNPGGLAQLMLFFAVAEGATYCGDFWSGGGEREAGDLGLYLKKPGKAAVEKLRLQELKNGRLAMISVAACASEHWIKGAVPFLEGQGY 216

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BLAST of mRNA_P-fluviatile_contig62.12923.1 vs. uniprot
Match: A0A836CLY0_9STRA (Light harvesting complex protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLY0_9STRA)

HSP 1 Score: 183 bits (464), Expect = 2.690e-55
Identity = 91/175 (52.00%), Postives = 122/175 (69.71%), Query Frame = 0

Query:   49 IGVSTEAGGSVFDPLGLAELHKINPQ-VNPHPKWLQESELKHCRICMLAFVGIAAAQAGVILPGLDYAAVPWYDQFNEFASKNPGGLAQLMLFFAVAEG--ATYCGDMWSGGGDRDAGDLGL----YLKKPSQADVEKLRLQELKNGRLAMLSVAAFASEHWISGSVPLLAGQGF 216
            +G   E G   +DP+G ++++K+N   +NPHP+WLQESE+KH R  MLAFVG     AG+ +PGLDY    WY+ F EFA+KNP GLAQ+M    + EG   T  G MW+G G R+ G+LG      +K  S+ADV  ++L+E+KNGRLAM+++A FASEH+I GSVPLL+GQGF
Sbjct:    6 LGAGVETGNEPWDPMGFSQMYKVNSLGINPHPQWLQESEIKHGRTAMLAFVGTLVIHAGIHIPGLDYTT-DWYNSFPEFAAKNPLGLAQVMAGLTIWEGHYGTEAGLMWTGEGTRNPGELGFDPLNLMKGKSEADVNTMKLKEIKNGRLAMIAMAGFASEHFIPGSVPLLSGQGF 179

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BLAST of mRNA_P-fluviatile_contig62.12923.1 vs. uniprot
Match: A0A7S2SV94_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV94_9STRA)

HSP 1 Score: 155 bits (393), Expect = 4.420e-44
Identity = 80/179 (44.69%), Postives = 109/179 (60.89%), Query Frame = 0

Query:   46 DGMIGVSTEAGGSVFDPLGLAELHKI----NPQVNPHPKWLQESELKHCRICMLAFVGIAAAQAGVILPG----LDYAAVPWYDQFNEFASKNPGGLAQLMLFFAVAEGATYCGDMWSGGGDRDAGDLGLYL---KKPSQADVEKLRLQELKNGRLAMLSVAAFASEHWISGSVPLLAG 213
            DGMIGV  E G +V+DPL L  +       +  V PH KWL+E+E+KH R  MLAFVG  AA  GV+ PG      Y    WYD      S N  G+AQL +  A+ EG  + G+ W+GGG+R+AGDLG       K +  D++++++ ELKNGRLAM+++A   +EH + GSVPL+ G
Sbjct:   37 DGMIGVGPETGNTVWDPLSLGSVSDTIKGEHSSVMPHAKWLREAEIKHGRAAMLAFVGTMAAATGVVFPGDLGGFHYEPCAWYDGLASAVSTNSFGMAQLFIAIALVEGNAFPGEFWTGGGEREAGDLGFLPFGDAKKNNRDLDEMKISELKNGRLAMIAMAGLFAEHQLPGSVPLIPG 215

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BLAST of mRNA_P-fluviatile_contig62.12923.1 vs. uniprot
Match: I2CR44_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR44_NANGC)

HSP 1 Score: 150 bits (379), Expect = 3.250e-42
Identity = 85/178 (47.75%), Postives = 109/178 (61.24%), Query Frame = 0

Query:   46 DGMIGVSTEAGGSVFDPLGLAEL-HKINPQVNPHPKWLQESELKHCRICMLAFVGIAAAQAGVILPGLDYAAVPWYDQFNEFAS-------KNPGGLAQLMLFFAVAEGATYCGDMWSGGGDRDAGDLGL----YLKKPSQADVEKLRLQELKNGRLAMLSVAAFASEHWISGSVPLL 211
            +G +G   E GG  +DPLG A +  + N  +NPH KWLQESE+KH R  MLAF+G       VI+PG     VP Y Q  +F          NP G+AQ+ L  A+ EG  Y GD W+GGGDR+ G  G     + K  S+A ++ +RL+ELKNGRLAM+++AAFASE  I GSVPLL
Sbjct:   18 EGQVGYDVETGGKPWDPLGFAGISERNNLGINPHIKWLQESEIKHGRTAMLAFLG-------VIVPGSLGVYVPTYPQEPDFTQAFYKALQNNPLGMAQIALAIAIIEGHYYAGDFWTGGGDREVGAFGFDPLGFSKGKSEAALKSMRLKELKNGRLAMIAMAAFASEKLIPGSVPLL 188

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BLAST of mRNA_P-fluviatile_contig62.12923.1 vs. uniprot
Match: A0A7S2BU75_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BU75_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.770e-41
Identity = 78/177 (44.07%), Postives = 106/177 (59.89%), Query Frame = 0

Query:   46 DGMIGVSTEAGGSVFDPLGLAELHKI----NPQVNPHPKWLQESELKHCRICMLAFVGIAAAQAGVILPG----LDYAAVPWYDQFNEFASKNPGGLAQLMLFFAVAEGATYCGDMWSGGGDRDAGDLGLYL---KKPSQADVEKLRLQELKNGRLAMLSVAAFASEHWISGSVPLL 211
            D M+GV  E+G  V+DP+    + K+    +  V P  KWL+E+E+KH R+CMLAFVG   A  GV+ PG      Y A  WYD      S N  G+AQL++   + EG ++  + W GGGDR+AGDLG         +  D ++LRL ELKNGRLAM+++A F S+H + GSVP L
Sbjct:   52 DSMVGVGPESGNKVWDPMSFGSVSKVIAGEHSTVMPDVKWLREAEIKHGRVCMLAFVGTCFAANGVVFPGDLGGFHYEACAWYDGLASGLSTNSFGMAQLLMTIGLIEGFSFPAEFWVGGGDREAGDLGFLPFGDAAKNGRDFDELRLSELKNGRLAMIAMAGFFSQHQLPGSVPFL 228

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BLAST of mRNA_P-fluviatile_contig62.12923.1 vs. uniprot
Match: Q9ATC4_VAULI (Light harvesting complex protein 2 (Fragment) n=4 Tax=Eukaryota TaxID=2759 RepID=Q9ATC4_VAULI)

HSP 1 Score: 146 bits (368), Expect = 3.610e-41
Identity = 76/148 (51.35%), Postives = 102/148 (68.92%), Query Frame = 0

Query:   75 VNPHPKWLQESELKHCRICMLAFVGIAAAQAGVILPGLDYAAVPWYDQFNEFASKNPGGLAQLMLFFAVAEG--ATYCGDMWSGGGDRDAGDLGLYL----KKPSQADVEKLRLQELKNGRLAMLSVAAFASEHWISGSVPLLAGQGF 216
            +NPHP+WLQESE+KH RICMLAFVG     AG+ +P L Y +  WY+ F EF +KNP GLAQ++    + EG   T  G MW+G  +R  G L   L    K  +++ ++ ++L+E+KNGRLAM+++AAFASEH+ISGSVPLL   GF
Sbjct:    4 INPHPQWLQESEIKHGRICMLAFVGTLVIHAGIHIPNLGYTS-DWYNSFPEFVAKNPLGLAQVIAGLTIWEGFHGTETGLMWTGEANRKPGHLNFDLLNLMKGKNESQLKSIQLKEIKNGRLAMVAMAAFASEHFISGSVPLLDLFGF 150

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BLAST of mRNA_P-fluviatile_contig62.12923.1 vs. uniprot
Match: A0A6V1SPG2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SPG2_HETAK)

HSP 1 Score: 139 bits (349), Expect = 1.400e-37
Identity = 91/217 (41.94%), Postives = 119/217 (54.84%), Query Frame = 0

Query:    3 VTAAAAVASLGMASAFVTPGAFRAPAALNKAASSTTSLSMSSCDGMIGVSTEAGGSVFDPLGLAELHKINPQVNPHPKWLQESELKHCRICMLAFVGIAAAQAGVILPGLDYAAVPWYDQFNEFASKNPGGLAQLMLFFAVAEGATYCGDMWSGGGDRDAGDLGL----YLKKPSQADVEKLRLQELKNGRLAMLSVAAFASEHWISGSVPLLAGQG 215
            + AA+ VA LG ASAFV       P+A    A S   + M   D M+G   E G   +DPL L++L  ++ Q NPH  WL+ESELKH R+ MLA VG+ A   G  +PG       W   + E   KNP    Q++LF  + EG TY G++W G G R  G LG     + KK    +V +L+  ELKNGR AM+++AA+AS   I GSVPL    G
Sbjct:    2 IKAASLVAMLGSASAFV-------PSASVGGAKSVQVMKMGLED-MVGAGVETGNKPWDPLNLSKLSDVS-QNNPHVNWLRESELKHGRVAMLASVGVFATSIGARIPGYPVETKDWTAAYGEMIEKNPLAFVQILLFIGIIEGVTYPGELWFGEG-RAPGALGYDPLGFAKKDKTPEVTQLK--ELKNGRAAMIAMAAYASHELIPGSVPLYDALG 206

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BLAST of mRNA_P-fluviatile_contig62.12923.1 vs. uniprot
Match: Q5ENN0_HETTR (Chloroplast light harvesting complex protein n=1 Tax=Heterocapsa triquetra TaxID=66468 RepID=Q5ENN0_HETTR)

HSP 1 Score: 140 bits (353), Expect = 1.100e-35
Identity = 85/178 (47.75%), Postives = 112/178 (62.92%), Query Frame = 0

Query:   47 GMIGVSTEAGGSVFDPLGLAELHKINPQVN-----PHPKWLQESELKHCRICMLAFVGIAAAQAGVILPGLDYAAVP-WYDQFNE-FASKNPG-GLAQLMLFFAVAEGATYCGDMWSGGGDRDAGDLG---LYLKKPSQADVEKLRLQELKNGRLAMLSVAAFASEHWISGSVPLLAG 213
            GM+G   E  G ++DPLG  +L+  N   N     PH ++L+ESE+KH R+CMLAFVGI   Q+ V +PG  Y   P W +  +  +ASK P  GL Q+ +FF + EG  +  + W G  DR+ GDLG   L L K    D++K +LQELKNGRLAM++VAAFA+ H I GSVPLL G
Sbjct:  110 GMVGADVETNGEIWDPLGFGKLYDRNFDFNNVMTYPHAQYLRESEIKHGRVCMLAFVGIVV-QSIVQIPG--YPQEPDWLNALSACYASKVPTLGLVQMSVFFMLVEGRYFPENAWIGQMDREPGDLGFDPLKLTKKPGFDLKKAQLQELKNGRLAMIAVAAFAANHVIPGSVPLLTG 284

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BLAST of mRNA_P-fluviatile_contig62.12923.1 vs. uniprot
Match: A0A7S0NXV2_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NXV2_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 1.560e-34
Identity = 73/171 (42.69%), Postives = 102/171 (59.65%), Query Frame = 0

Query:   49 IGVSTEAGGSVFDPLGLAELHKINPQVNPHPKWLQESELKHCRICMLAFVGIAAAQAGVILPGLDYAAVPWYDQFNEFASKNPGGLAQLMLFFAVAEGATYCG--DMWSGG-GDRDAGDLG---LYLKKPSQADVEKLRLQELKNGRLAMLSVAAFASEHWISGSVPLLAG 213
            +G S E G + +DP  L EL K++   NP   WL+E+ELKH R+ MLAF GI A   G+ LPG  +    W        +KNP G+ Q++    V EG +  G  D+W G    R+ G++G   L L  P++   +K+RL+ELKNGR+AM++VA FA+ H+I GSVP L G
Sbjct:   65 VGASVEFGDAPWDPWSLTELWKVSAN-NPDVAWLREAELKHGRLSMLAFAGILATNGGLHLPGEFWTDSDWTSALGSTFAKNPSGMLQIVAAIGVIEGTSSKGLFDLWLGNTATREPGNIGFDPLKLMPPTKVAADKMRLKELKNGRMAMIAVAGFAANHFIPGSVPGLQG 234

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BLAST of mRNA_P-fluviatile_contig62.12923.1 vs. uniprot
Match: A0A7S0PWE2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PWE2_9EUKA)

HSP 1 Score: 129 bits (325), Expect = 1.110e-33
Identity = 72/171 (42.11%), Postives = 100/171 (58.48%), Query Frame = 0

Query:   49 IGVSTEAGGSVFDPLGLAELHKINPQVNPHPKWLQESELKHCRICMLAFVGIAAAQAGVILPGLDYAAVPWYDQFNEFASKNPGGLAQLMLFFAVAEGATYCG--DMWSGGGD-RDAGDLG---LYLKKPSQADVEKLRLQELKNGRLAMLSVAAFASEHWISGSVPLLAG 213
            +G S E G   +DP  L EL K++   NP   WL+E+ELKH R+ MLAF G+ A   G+ LPG  +    W         KN GG+ Q++    + EG +  G  D+W G  + R+ G+LG   L L  P+    +K+RL+ELKNGR+AM+++A FAS H+I GSVP L G
Sbjct:   61 VGSSVELGDKPWDPWSLTELWKVSAN-NPDVAWLREAELKHGRLSMLAFAGVLATNGGLHLPGEFWTDSDWTTALGSTFGKNSGGMTQIVAAIGIIEGTSSKGLFDLWLGNTEKREPGNLGFDPLKLMPPTPVAADKMRLKELKNGRMAMIAMAGFASNHFIPGSVPGLQG 230

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig62.12923.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig62.12923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G0D5_ECTSI	8.390e-122	81.94	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
A0A836CLY0_9STRA	2.690e-55	52.00	Light harvesting complex protein 2 n=1 Tax=Tribone...	[more]
A0A7S2SV94_9STRA	4.420e-44	44.69	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
I2CR44_NANGC	3.250e-42	47.75	Uncharacterized protein n=1 Tax=Nannochloropsis ga...	[more]
A0A7S2BU75_9STRA	1.770e-41	44.07	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
Q9ATC4_VAULI	3.610e-41	51.35	Light harvesting complex protein 2 (Fragment) n=4 ...	[more]
A0A6V1SPG2_HETAK	1.400e-37	41.94	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
Q5ENN0_HETTR	1.100e-35	47.75	Chloroplast light harvesting complex protein n=1 T...	[more]
A0A7S0NXV2_9EUKA	1.560e-34	42.69	Hypothetical protein n=2 Tax=Calcidiscus leptoporu...	[more]
A0A7S0PWE2_9EUKA	1.110e-33	42.11	Hypothetical protein n=1 Tax=Coccolithus braarudii...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 50..213 e-value: 2.1E-23 score: 85.1
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 54..201 e-value: 2.6E-24 score: 86.6
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 28..211
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 28..211
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..13
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..216
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..17 score: 0.47
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 55..210
None	No IPR available	TMHMM	TMhelix		coord: 95..117
None	No IPR available	TMHMM	TMhelix		coord: 132..151

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig62	contig	P-fluviatile_contig62:227826..234677 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig62.12923.1	mRNA_P-fluviatile_contig62.12923.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig62 227826..234677 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig62.12923.1 ID=prot_P-fluviatile_contig62.12923.1|Name=mRNA_P-fluviatile_contig62.12923.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=217bp
MKVTAAAAVASLGMASAFVTPGAFRAPAALNKAASSTTSLSMSSCDGMIG
VSTEAGGSVFDPLGLAELHKINPQVNPHPKWLQESELKHCRICMLAFVGI
AAAQAGVILPGLDYAAVPWYDQFNEFASKNPGGLAQLMLFFAVAEGATYC
GDMWSGGGDRDAGDLGLYLKKPSQADVEKLRLQELKNGRLAMLSVAAFAS
EHWISGSVPLLAGQGF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln