prot_P-fluviatile_contig61.12844.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig61.12844.1
Unique Nameprot_P-fluviatile_contig61.12844.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length874
Homology
BLAST of mRNA_P-fluviatile_contig61.12844.1 vs. uniprot
Match: D8LLD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD1_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 6.280e-132
Identity = 254/453 (56.07%), Postives = 300/453 (66.23%), Query Frame = 0
Query:  435 DWCKTLGDIPQQLEGDFTVVVPADVVEISCPTLRTVRVAGGTLTVAIESEEVVFSGVRFEVECAASLVFSTHAPALFTGIEDLQANGGVLSVSQGGTVVMNGFANFHNNSVQALG-DVSSNGAAIFNEGLVRLRAGATFKGNFVHN----DSPSSPLAASAATRGEGGGGDGGALWNGSTGRMLVGAAAELEGNGIVGGPAGXXXXXLWNEGFVQFDGEARFLLNEAEXXXXXXXXXXGGRIRFKESATFSENKALAGSAFVNFAEGTVAFRGATSFLDNASQQEESSEAGAVWNQADSVLFCTGPVSWQRNRGFQAAAMLNAGKVVLRGGVSVRGNTAVMDGGGFINEAGAKIVLSLAAEFLDNVGTGDGGAILNYGELDFDLPSSAREPP-----------------FLLNFEGNYCGQQECKDIQNKDGSDVVKLHRHVPNLCAIGTLEI 865
            DWC  LG IP  LEG+ TVV+P DV  +SCP+  TVRVAGGTLTVA++SE VVFSGVRF VE AASL+FS +A   FTGI++LQ NGGVL+VS+ GTV MNG A F NNSVQA   +   +G +I+N+G+VRLR GATF  NFVH                     G GGDGGALWNG  GR+L  A A LEGNG+ G    XXXXX                     XXXXXXXXXXGG +RF+ ++TFS+N+A  GSAFVN A G VA     S +DN SQ++ESS AGAVWNQADSV+FCT  VSW+ N G+QA A+LNAG++V RG VSVR NTAVMDGGGFINE+G +++    AEFL NVGTG GGAILN GELDF                           F L+FE NYCG+QEC+DIQNKDGS V+ LH++V NLC IGT +I
Sbjct:   21 DWCDALGTIPYPLEGNLTVVLPTDVARVSCPSPLTVRVAGGTLTVAVDSEAVVFSGVRFVVESAASLIFSANASTEFTGIDNLQGNGGVLNVSEDGTVEMNGLAIFRNNSVQATTPETPCSGGSIYNKGIVRLRGGATFADNFVHGYYXXXXXXXXXXXXXXXXXXGTGGDGGALWNG--GRILFDAGANLEGNGVEGXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXGGLVRFEGTSTFSQNEAFDGSAFVNSAGGRVAVGQEMSIIDNVSQEDESSVAGAVWNQADSVVFCTAMVSWEGNSGYQAGALLNAGRMVFRGEVSVRDNTAVMDGGGFINESGGRVLFFHGAEFLSNVGTGSGGAILNRGELDFTPGGDXXXXXXXXXXXXXXXXXXTTRTFTLDFEDNYCGEQECQDIQNKDGSSVLGLHQYVSNLCDIGTQDI 469          
BLAST of mRNA_P-fluviatile_contig61.12844.1 vs. uniprot
Match: A0A6H5JP61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP61_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 2.860e-79
Identity = 157/273 (57.51%), Postives = 190/273 (69.60%), Query Frame = 0
Query:  611 RMLVGAAAELEGNGIVGGPAGXXXXXLWNEGFVQFDGEARFLLNEAEXXXXXXXXXX-GGRIRFKESATFSENKALAGSAFVNFAEGTVAFRGATSFLDNASQQEESSEAGAVWNQADSVLFCTGPVSWQRNRGFQAAAMLNAGKVVLRGGVSVRGNTAVMDGGGFINEAGAKIVLSLAAEFLDNVGTGDGGAILNYGELDF-----------------DLPSSAREPPFLLNFEGNYCGQQECKDIQNKDGSDVVKLHRHVPNLCAIGTLEI 865
            R+L  A A LEGNG+ GG  G     LWNEGFV+F  EA F LN   XXXXXXXXXX GG +RF+ ++T ++N+A  GSAFVN A G VA R   S  DN SQ+E SS AGAVWNQADSV+FCT  +SW+ N G+QA A+LNAG++V RG VSVR NTAVMDGGGFINE+G +I+    AEFL NVGTG GGAILN+ ELDF                    S+ R   F L+F+ NYCG+QEC+DIQNKDGS ++ LH++VP+LC IGT +I
Sbjct:    6 RILFDAGANLEGNGVEGGGNGGG---LWNEGFVKFGQEATFTLNXXXXXXXXXXXXXXGGLVRFEGNSTLNQNEAFDGSAFVNSAGGRVAVRQEMSITDNVSQEEASSVAGAVWNQADSVVFCTAMMSWEGNSGYQAGALLNAGRMVFRGEVSVRDNTAVMDGGGFINESGGRILFFHGAEFLSNVGTGSGGAILNHAELDFAPGGDXXXXXXXXXXXXXXXSTTRT--FTLDFQDNYCGEQECQDIQNKDGSSILGLHQYVPDLCDIGTQDI 273          
BLAST of mRNA_P-fluviatile_contig61.12844.1 vs. uniprot
Match: A0A6H5JTI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI4_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 2.460e-42
Identity = 102/228 (44.74%), Postives = 135/228 (59.21%), Query Frame = 0
Query:  276 KQHGETGNTLPEIKVLKPTAGDVIVLDSNFEVKWAVDPEQAGSGSTTAFHVDLCDCGGDESCAGVAG---GACCAGEFVLALCPDEGCQSIDGTAS----VTVPEVD-GAGPYYKIAVSPDDGSISMGCSGVFTKDTKPERKGGETRPGTDDADTGEEGKGPAEE-----------KKDWCKTLGDIPQQLEGDFTVVVPADVVEISCPTLRTVRVAGGTLTVAIESE 484
            ++HG +  +   I+VL+P+ G+V++ +S++EV WAVD E+ GS S   FHVDL DCG +++C   +G   G C     V ALCP+EGC S  G       VT+P+VD G GPY+KIAVSPDDGS   GCSG FT +     +  ET+  T                          + DWC TLG IP  LEG+ TV +P DV ++SCP+  TVRVAGGTLTVA++SE
Sbjct:  143 EEHGVSDGSFSSIQVLRPSDGEVLISESSYEVTWAVDGEE-GSSSPDVFHVDLHDCGDNQACGSGSGXXDGGCVGEGLVQALCPEEGCYSDGGGGGGVTWVTLPKVDDGLGPYFKIAVSPDDGSNDPGCSGSFTIEAAAGEE--ETQESTGXXXXXXXXXXXXXXXXXXXXXXXXXEDDWCDTLGTIPYPLEGNLTVALPIDVTQVSCPSPLTVRVAGGTLTVAVDSE 367          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig61.12844.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLD1_ECTSI6.280e-13256.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP61_9PHAE2.860e-7957.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTI4_9PHAE2.460e-4244.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 29..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..873
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 41..45
NoneNo IPR availableTMHMMTMhelixcoord: 25..47
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 518..811

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig61contigP-fluviatile_contig61:324610..337854 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig61.12844.1mRNA_P-fluviatile_contig61.12844.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig61 324303..338053 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig61.12844.1 ID=prot_P-fluviatile_contig61.12844.1|Name=mRNA_P-fluviatile_contig61.12844.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=874bp
MDLANRVECARRQSRRAKMRRPKPMGLMALCVLSIGAIAIPPAVASAPLA
TQADSAIPRWKDRSPQTASVQGEEGVESTSENLQRQQQRQQHRGSESEGS
GGEEPTGGAGVAASLFSRRLATATAPPGRTAADNRTTTPAPTPGPIVEST
APTVGTIVVSAAPTIAESAGPIVGAVFASMPPSTPEALESTAPTSVAIAS
AVVSASASASASTAGYLTASSSVSATFTTTSAGEGNVDSGPGAEQVSGTD
TTGGSDGGGPADDGGVDDSTGGPQGKQHGETGNTLPEIKVLKPTAGDVIV
LDSNFEVKWAVDPEQAGSGSTTAFHVDLCDCGGDESCAGVAGGACCAGEF
VLALCPDEGCQSIDGTASVTVPEVDGAGPYYKIAVSPDDGSISMGCSGVF
TKDTKPERKGGETRPGTDDADTGEEGKGPAEEKKDWCKTLGDIPQQLEGD
FTVVVPADVVEISCPTLRTVRVAGGTLTVAIESEEVVFSGVRFEVECAAS
LVFSTHAPALFTGIEDLQANGGVLSVSQGGTVVMNGFANFHNNSVQALGD
VSSNGAAIFNEGLVRLRAGATFKGNFVHNDSPSSPLAASAATRGEGGGGD
GGALWNGSTGRMLVGAAAELEGNGIVGGPAGGRGGGLWNEGFVQFDGEAR
FLLNEAEGGRGGGLFNQGGRIRFKESATFSENKALAGSAFVNFAEGTVAF
RGATSFLDNASQQEESSEAGAVWNQADSVLFCTGPVSWQRNRGFQAAAML
NAGKVVLRGGVSVRGNTAVMDGGGFINEAGAKIVLSLAAEFLDNVGTGDG
GAILNYGELDFDLPSSAREPPFLLNFEGNYCGQQECKDIQNKDGSDVVKL
HRHVPNLCAIGTLEIEEEEGGLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence