prot_P-fluviatile_contig6.12680.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12680.1
Unique Nameprot_P-fluviatile_contig6.12680.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length763
Homology
BLAST of mRNA_P-fluviatile_contig6.12680.1 vs. uniprot
Match: D7G1W0_ECTSI (tRNA_int_end_N2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1W0_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 2.970e-54
Identity = 228/697 (32.71%), Postives = 274/697 (39.31%), Query Frame = 0
Query:   79 GTTWRGRTMLHAEEGLWLAERGMLAVHPFPGAGVSAPVPVAKISLTTLTAGTSAENENTIRIRGGEMKKYWRKKAGEEEGGTEEKKAQEGRNKTAPHDNVGAGVGNTTGSLMQEEKEEEVXXXXXXXXXXXXGEQRDQAEGGG--GATGSSISTSGWQVIPPSRNTASEDCLPEAKMSSHDSPPTGTLAGDPGRVLDLREDGGLAWEVQGHSCQR----------RAGRKRGRAESGEGGKERAIAPV--LPVPVGILHGTILSRAGVPWECYRAYAELKRRSHVVRRRPEDTVGHDDNAPRAAPLSWF---GPTPFSVRRXXXXXXXXXXXXXXXKHFSADAGIDATXXXXXXXXXXXSFGTLSVPVTFHIYNNRLSSFSSSTHPVYSSXXXXXXXXXXXDPGPPDALLVVCRFEDPMPDHRSLVALAERHAGMMIAAKSTATNTKITATXXXXXXXXXXXXXXXXXXXVTKAAAAVSMIGGTGTSTQRTRGTSSRRGGAEGSCPDPERTPSSPGGGRSRCYTIEGREAAVVGSAGGDERDVSLPGAGRAWVRRREEFPSNGQQRGGGAGDDDKFPSDPRQGHGGGRVRGSGGVPVMVQGVGGSEGVLPSREQGELEQNRVLGESVSGESEGNGDGGGWREGFTAENGGRSRTGLLSAAARGLCSPGIKLAVVSGEAGVQLFDVGLHDADEVANPP 758
            GTTWR R MLHAEEGLWL ERGMLAVHPF  A      P    S    ++G   +N+        EM                             HD  G  + ++T  + QE +  E               +  + EGGG  G T    S++G    P           P A++S  DS     L G+    LD    G  A   QG  C++          RAG KR R   G G  ER + P   L V V  L+  +L+RAGVPWECYR YAELKRRS+VVRR+PEDTVGHDD APRAAPLSWF   G T  S  +                H S+ +                     S+PVTFH+Y+N  S  SSS                  DPGPPDAL+VVCRF DPMPDHRSLVAL E HA M +                                        +SM                                       S+ +   GRE +  G       D + P  G        E P++G +               R   GGGR  G              +G L   ++ +  Q R L +   G      DGG  R   T E  G  RT   S     L +PGIKLAVVSGEA VQLFDVGLHDA E A  P
Sbjct:   65 GTTWRSRLMLHAEEGLWLVERGMLAVHPFSPAPKKNHDPTGTASPAAPSSGIGRKNDAR------EM-----------------------------HDETG--ISSSTPEIAQEMRNIE--------------HEEKENEGGGQEGLTDDVDSSAGKNARP---------IPPRAELSPIDSGVI--LTGESQHSLDPVASGETARTGQGGGCRKVPTAAKEGRQRAGCKRSRPGQGRG--ERVVRPAAALSVSVSTLYEMVLARAGVPWECYRTYAELKRRSYVVRRQPEDTVGHDDTAPRAAPLSWFQGTGATKTSNNKLITAA----------NHTSSPSS--------------------SLPVTFHVYSNP-SGCSSSFR--------------KRDPGPPDALVVVCRFGDPMPDHRSLVALVELHANMQMK---------------------------------------MSM---------------------------------------SQQWRRRGREDSTAGVVSDLGPDEAAPDRGSG----SPEVPTSGLES-------------ERVTSGGGRESGQ-------------KGSLLDEDR-QKRQARTLPDQKKGL-----DGGRTRGRLTTEGSG-GRTLAFSKGVEKLSTPGIKLAVVSGEAQVQLFDVGLHDALEAAELP 537          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12680.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1W0_ECTSI2.970e-5432.71tRNA_int_end_N2 domain-containing protein n=2 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 190..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..762
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
IPR024337tRNA-splicing endonuclease, subunit Sen54PANTHERPTHR21027TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54coord: 324..495

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:3593062..3595642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12680.1mRNA_P-fluviatile_contig6.12680.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 3592558..3596464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12680.1 ID=prot_P-fluviatile_contig6.12680.1|Name=mRNA_P-fluviatile_contig6.12680.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=763bp
MISCSSWRRVGAMRLLGQGLTFFHSFAAIASHSNPESQRIPVSLSHIVIL
SFGVLDVARVRAACIVAATAAAAAKLLQGTTWRGRTMLHAEEGLWLAERG
MLAVHPFPGAGVSAPVPVAKISLTTLTAGTSAENENTIRIRGGEMKKYWR
KKAGEEEGGTEEKKAQEGRNKTAPHDNVGAGVGNTTGSLMQEEKEEEVKD
ETEKDETEKEGEQRDQAEGGGGATGSSISTSGWQVIPPSRNTASEDCLPE
AKMSSHDSPPTGTLAGDPGRVLDLREDGGLAWEVQGHSCQRRAGRKRGRA
ESGEGGKERAIAPVLPVPVGILHGTILSRAGVPWECYRAYAELKRRSHVV
RRRPEDTVGHDDNAPRAAPLSWFGPTPFSVRRRRRGRTTTNNSNNREKHF
SADAGIDATSSSSSYSSSSSSFGTLSVPVTFHIYNNRLSSFSSSTHPVYS
SPPPPSSSFRRRDPGPPDALLVVCRFEDPMPDHRSLVALAERHAGMMIAA
KSTATNTKITATETTARATTATTATATTATVVTKAAAAVSMIGGTGTSTQ
RTRGTSSRRGGAEGSCPDPERTPSSPGGGRSRCYTIEGREAAVVGSAGGD
ERDVSLPGAGRAWVRRREEFPSNGQQRGGGAGDDDKFPSDPRQGHGGGRV
RGSGGVPVMVQGVGGSEGVLPSREQGELEQNRVLGESVSGESEGNGDGGG
WREGFTAENGGRSRTGLLSAAARGLCSPGIKLAVVSGEAGVQLFDVGLHD
ADEVANPPVFPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024337tRNA_splic_suSen54