prot_P-fluviatile_contig6.12644.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12644.1
Unique Nameprot_P-fluviatile_contig6.12644.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length611
Homology
BLAST of mRNA_P-fluviatile_contig6.12644.1 vs. uniprot
Match: A0A6H5KKG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKG2_9PHAE)

HSP 1 Score: 402 bits (1033), Expect = 8.680e-129
Identity = 251/410 (61.22%), Postives = 293/410 (71.46%), Query Frame = 0
Query:  161 KAERSRRIINTVDLLETLEKSEVNLKEVLLEFSSTLRDGDGLIRDERLIGEIARPVVARIRRYKTRDAYRRRQAAKRRGQELSPGRGAKALEEENKPFPTTAAEVDRFLGSTKVTVWDAVRAYQVLTPGERIRRQKIALSRTDPQRWFAERMEEEMRKNARRNDPAYLAEKREERRLSGIRRYETRRRNGNSGKGRPRSRADQRKAEELAAARAAAIAAGIATEADFAPP-PKKVPLKDIPTVKRRRGRPRKFVTEEERAAAKAEAAALSPRKXXXXXXXXXXXXXXXXLALRKANGPRPVGRPRKLPLEPLPVPQPCHVTASLTKVVRAWMADAAAQXXXXXXXXXXXGSSGVCSVAPADLESHAKALAVSKTKEVTGVGP---GGAWTPRMTRIALAGIEAWKDGWKE 566
            KA R RRI +TVDL+ETL  SEV+L++VL ++SST  D +GL+++ERL+GEIARPVVARIRRY+TR A  RRQAA+R  +     R  +  + + KPFPTTA E+D FL S KVTVWDA+R+Y+V+T GE+IRRQKIALS TDP +W A RMEE  RK A + DP  L   REERRL  IRRYETRRRNGNSGKG+PRS+ADQRKAEELAAARAAAIA G+ATEADFAPP P++V  KDIPTVKRRRGRPRK +TEEE+ A                             ALR+ANGP P GR R L   PLP+  PCHVTA++T+ VR WMA AAA+            S+GV SV  ADLE+HAKALAVSKTKEVTG G    GG WT  MTRIALAGIEAWKD W+E
Sbjct:  182 KAFRGRRIEDTVDLMETLMNSEVDLQDVLRQYSSTATDAEGLLKEERLVGEIARPVVARIRRYRTRIAALRRQAARRLAEHDPSTRRPERRKRKVKPFPTTAKEIDDFLLSYKVTVWDAIRSYEVITTGEKIRRQKIALSITDPVQWEANRMEELERKRAMQKDPDEL---REERRLRAIRRYETRRRNGNSGKGKPRSKADQRKAEELAAARAAAIATGLATEADFAPPAPRRVFKKDIPTVKRRRGRPRKVLTEEEKMAR----------------------------ALRQANGPLPRGRQRDLTGPPLPLDAPCHVTAAVTENVREWMAAAAAEAAAAAM------SNGVRSVTAADLEAHAKALAVSKTKEVTGGGGRXGGGVWTAGMTRIALAGIEAWKDKWRE 554          
BLAST of mRNA_P-fluviatile_contig6.12644.1 vs. uniprot
Match: D7G140_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G140_ECTSI)

HSP 1 Score: 348 bits (893), Expect = 3.560e-108
Identity = 261/533 (48.97%), Postives = 313/533 (58.72%), Query Frame = 0
Query:   62 SSRVELLAGVEALLLDWR-----RDQKSIHRRTHRSLCAR-TRSQEGSGAEGIEENFEGEETGSGSVKVESDARIDGQXXXXXXXXXXXXXXR--MGKGRQVDND---------------RLKAERSRRIINTVDLLETLEKSEVNLKEVLLEFSSTLRDGDGLIRDERLIGEIARPVVARIRRYKTRDAYRRRQAAKRRGQELSPGRGAKALEEENKPFPTTAAEVDRFLGSTKVTVWDAVRAYQVLTPGERIRRQKIALSRTDPQRWFAERMEEEMRKNARRNDPAYLAEKREERRLSGIRRYETRRRNGNSGKGRPRSRADQRKAEELAAARAAAIAAGIATEADFAPP-PKKVPLKDIPTVKRRRGRPRKFVTEEERAAAKAEAAALSPRKXXXXXXXXXXXXXXXXLALRKANGPRPVGRPRKLP-LEPLPVPQPCHVTASLTKVVRAWMADAAAQXXXXXXXXXXXGSSGVCSVAPADLESHAKALAVSKTKEVTGVGP---GGAWTPRMTRIALAGIEAWKDGWKE 566
            SSR +LL G E  +L W+     RDQ        RS+CAR T S +G G   +E   EGE  G G  +     R+  Q                  G G QV  +               + KA R RRI +T DL+ETL  SEV+L++VL + SST  D +G +++ERL+GEIARPVVARIRRY+TR A  RRQAA+R  ++    +  +  + + KPFPTTA E+D FL S KVTVWDA+R                    TDP +W A RMEE  RK A + DP  L E   ERRL  IRRYE RRRNGNSGKG+PRS+ADQRKAEELAAARAAAIAAG+ATEADFAPP P+++  KDIPTVKRRRGRPRK +TEEE+ A                             ALR+ANGP P GR R L    P P+  PCHVTA++T+ VR WMA AAA+            S+GV SV  ADLE+HAKALAVSKTKEVTG G    GG W+  MTRIALAG+EAW D W+E
Sbjct:   70 SSR-QLLVGEE--ILWWKCLPVFRDQGKP-----RSICARATTSHKGGGHGDVEGAEEGE--GQGGPREGKQGRVGNQERARASSVGAVVNVSGVTGGGTQVKGEGGKRKRARLTAAEKAQQKAYRGRRIKDTADLMETLMNSEVDLQDVLRKHSSTATDAEGFLKEERLVGEIARPVVARIRRYRTRIAALRRQAARRLAEQYPSTKRPERRKRKAKPFPTTAKEIDDFLLSYKVTVWDAIRI-------------------TDPVQWEANRMEELERKRAMQKDPEELQE---ERRLRAIRRYEARRRNGNSGKGKPRSKADQRKAEELAAARAAAIAAGLATEADFAPPAPRRIFKKDIPTVKRRRGRPRKVLTEEEKMAR----------------------------ALRQANGPLPRGRQRDLTGPPPPPLDAPCHVTAAVTENVREWMAAAAAEAAAAAM------SNGVRSVTAADLEAHAKALAVSKTKEVTGGGGRGGGGVWSAGMTRIALAGMEAWHDKWRE 536          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKG2_9PHAE8.680e-12961.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G140_ECTSI3.560e-10848.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017956AT hook, DNA-binding motifPRINTSPR00929ATHOOKcoord: 429..440
score: 53.12
coord: 455..465
score: 51.14
coord: 403..413
score: 63.26
IPR017956AT hook, DNA-binding motifSMARTSM00384AT_hook_2coord: 457..469
e-value: 17.0
score: 8.4
coord: 431..443
e-value: 4.5
score: 11.6
coord: 403..415
e-value: 0.31
score: 18.1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..610
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..39
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..10
score: 0.465

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:3181016..3190758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12644.1mRNA_P-fluviatile_contig6.12644.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 3180971..3191659 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12644.1 ID=prot_P-fluviatile_contig6.12644.1|Name=mRNA_P-fluviatile_contig6.12644.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=611bp
MPLGGGLRSRALRVSLTFLALGTRSFRAAGAFSAARAAASGACSSRCGVR
SGAAPKKPPYPSSRVELLAGVEALLLDWRRDQKSIHRRTHRSLCARTRSQ
EGSGAEGIEENFEGEETGSGSVKVESDARIDGQGRGGGDAGAGAGDGRMG
KGRQVDNDRLKAERSRRIINTVDLLETLEKSEVNLKEVLLEFSSTLRDGD
GLIRDERLIGEIARPVVARIRRYKTRDAYRRRQAAKRRGQELSPGRGAKA
LEEENKPFPTTAAEVDRFLGSTKVTVWDAVRAYQVLTPGERIRRQKIALS
RTDPQRWFAERMEEEMRKNARRNDPAYLAEKREERRLSGIRRYETRRRNG
NSGKGRPRSRADQRKAEELAAARAAAIAAGIATEADFAPPPKKVPLKDIP
TVKRRRGRPRKFVTEEERAAAKAEAAALSPRKRRGRPPKVRTEEERAALA
LRKANGPRPVGRPRKLPLEPLPVPQPCHVTASLTKVVRAWMADAAAQAAE
AAAAAAAVGSSGVCSVAPADLESHAKALAVSKTKEVTGVGPGGAWTPRMT
RIALAGIEAWKDGWKEAFASTAAGAAADDAGADADAAPARVASAAAAAAA
AAASNGEDPG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017956AT_hook_DNA-bd_motif