prot_P-fluviatile_contig6.12630.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig6.12630.1
Unique Name	prot_P-fluviatile_contig6.12630.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	113

Homology

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BLAST of mRNA_P-fluviatile_contig6.12630.1 vs. uniprot
Match: A0A6H5KL80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL80_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 4.080e-45
Identity = 75/111 (67.57%), Postives = 88/111 (79.28%), Query Frame = 0

Query:    2 EECSTTGPCVWCEKDDLHLEYCKETGRRQEVRCIVRGAGLDIAGGGGAAGPIGVLPSSVRYISCSYAEEDDLLGLFHFWLAMVVVGILACFGMRRRQQKGGALSLYDRRAK 112
            EEC   GPCVWCEKD++ LEYCKETGRR+EVRC V+GA  ++A G  A G +GVLPSSV+Y SC YAEED+ LGL HFW+ MV VG+ ACF +R+RQQKGG  SLY RRAK
Sbjct:  290 EECKAIGPCVWCEKDEVSLEYCKETGRREEVRCTVQGAAQNMAAGV-AGGAVGVLPSSVKYRSCPYAEEDEFLGLLHFWIFMVAVGVSACFCLRKRQQKGG--SLYSRRAK 397

[Close]

BLAST of mRNA_P-fluviatile_contig6.12630.1 vs. uniprot
Match: D7G1T5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T5_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 9.820e-39
Identity = 66/109 (60.55%), Postives = 79/109 (72.48%), Query Frame = 0

Query:    2 EECSTTGPCVWCEKDDLHLEYCKETGRRQEVRCIVRGAGLDIAGGGGAAGPIGVLPSSVRYISCSYAEEDDLLGLFHFWLAMVVVGILACFGMRRRQQKGGALSLYDRR 110
            EEC  TGPCVWCEKD+++LEYC+ETGRR+EVRC V+GA  ++A GG A G +GVLPSSV+Y SC+YAEEDD LGLFHFW+ MV              +K G  SLYD R
Sbjct:  139 EECKATGPCVWCEKDEVNLEYCRETGRREEVRCTVQGAEQNMAAGG-AGGAVGVLPSSVKYRSCAYAEEDDFLGLFHFWIVMVAXXXXXXXXXXXXXKKVG--SLYDER 244

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig6.12630.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig6.12630.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KL80_9PHAE	4.080e-45	67.57	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G1T5_ECTSI	9.820e-39	60.55	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 95..112
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 76..94
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..75
None	No IPR available	TMHMM	TMhelix		coord: 76..93
None	No IPR available	TMHMM	TMhelix		coord: 34..56

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig6	contig	P-fluviatile_contig6:3024307..3026839 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig6.12630.1	mRNA_P-fluviatile_contig6.12630.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig6 3024307..3027822 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig6.12630.1 ID=prot_P-fluviatile_contig6.12630.1|Name=mRNA_P-fluviatile_contig6.12630.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=113bp
EEECSTTGPCVWCEKDDLHLEYCKETGRRQEVRCIVRGAGLDIAGGGGAA
GPIGVLPSSVRYISCSYAEEDDLLGLFHFWLAMVVVGILACFGMRRRQQK
GGALSLYDRRAK*