prot_P-fluviatile_contig6.12616.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12616.1
Unique Nameprot_P-fluviatile_contig6.12616.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length437
Homology
BLAST of mRNA_P-fluviatile_contig6.12616.1 vs. uniprot
Match: D8LKQ4_ECTSI (Poly(Rc) binding protien (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ4_ECTSI)

HSP 1 Score: 399 bits (1026), Expect = 8.290e-135
Identity = 244/336 (72.62%), Postives = 253/336 (75.30%), Query Frame = 0
Query:  117 MHQRHFGXXXXXXXXXXXXXXXRGVPSPRAGGPMAAGRGTPPPMRPLPPNAGGGIGLRRRPEQLMVGPLGDPVFAGSSGACGGGXXXXXXXGE---GNNLGMETVSRVLIPNCKIGAVIGKAGAIIKHIREVSGAKVTISDSCTGLHDDSDDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISSHAFHFHPVHGPLPAPAHNSPTSSQGGSG---------HHVSPLNGGGPPXXXXXXXXXXXXXXXXXXXXXXXRFG---PNIPLPPPILMDRVMTAMGSFDA 437
            MH RH G               RG+PSPR+G   AAGRG PPPMR LP N GG  G  RRP+ LMVGPLGDP+F GS G CGGG   XXXX     G +LGMETVSRVLIPNCKIGAVIGK GAIIKHIREVSGAKVTISDSCTGLH DSDDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISSHAFHFHPVHGPLPAP H+ PT   GG G         H   P   GGP        X XXXXXXXXXXX   R G     IPLP P+LMDRVMTAMGS++A
Sbjct:    1 MHPRHLGGPPSAAGVAGGQ---RGMPSPRSGPVGAAGRGPPPPMRLLPQNGGGVGGPCRRPDHLMVGPLGDPMFGGSPGTCGGGMGLXXXXXXXXXGGSLGMETVSRVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDSDDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISSHAFHFHPVHGPLPAPPHHPPTPQAGGPGPGGPQSSSIHGGLPNGDGGPRGGGPGVGXSXXXXXXXXXXXPAEREGGPPAGIPLPLPMLMDRVMTAMGSYNA 333          
BLAST of mRNA_P-fluviatile_contig6.12616.1 vs. uniprot
Match: A0A6H5L8U0_9PHAE (KH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8U0_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 3.340e-61
Identity = 149/185 (80.54%), Postives = 152/185 (82.16%), Query Frame = 0
Query:  267 MVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISSHAFHFHPVHGPLPAPAHNSPTSSQGGSG---------HHVSPLNGGGPPXXXXXXXXXXXXXXXXXXXXXXX---RFGP--NIPLPPPILMDRVMTAMGSFDA 437
            MVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISSHAFHFHPVHGPLPAP H++PT   G            H   P   GGP XXXXXXXXXXXXXXXXXXXXXX      GP   IPLP P+LMDRVMTAMGSFDA
Sbjct:    1 MVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISSHAFHFHPVHGPLPAPPHHTPTPQAGXXXXXXXXXXXIHGGLPHGDGGPXXXXXXXXXXXXXXXXXXXXXXXPAEREGGPPAGIPLPLPMLMDRVMTAMGSFDA 185          
BLAST of mRNA_P-fluviatile_contig6.12616.1 vs. uniprot
Match: A0A836CIH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH4_9STRA)

HSP 1 Score: 129 bits (324), Expect = 6.090e-29
Identity = 86/174 (49.43%), Postives = 103/174 (59.20%), Query Frame = 0
Query:  212 NLGMETVSRVLIPNCKIGAVIGKAGAIIKHIREVSGAKVTISDS------CTGLHDDSDDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLA--------GGDPDCVANS--------FRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISSHAFHFHPVHGPLPAP 363
            N   E VSRVLIPN KIGAVIGK GAI+KHIRE SGA+VTISD+        G      +R+V   G+F +V  A   IL+HA     + +P+ GLA         G+     ++        FR+LIPN KAG LIGRGG TIKAIR+ SGARIEISSH      + G LPAP
Sbjct:  101 NASSEAVSRVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLVHLVGSFGAVVAALGAILAHA-ETPSNGEPLPGLAQLVAGGLLSGEAAAAVDAAITVPPSAFRMLIPNAKAGALIGRGGTTIKAIRDASGARIEISSH------LAGNLPAP 267          
BLAST of mRNA_P-fluviatile_contig6.12616.1 vs. uniprot
Match: A0A835Z8V5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V5_9STRA)

HSP 1 Score: 118 bits (295), Expect = 8.700e-25
Identity = 81/172 (47.09%), Postives = 100/172 (58.14%), Query Frame = 0
Query:  216 ETVSRVLIPNCKIGAVIGKAGAIIKHIREVSGAKVTISDS------CTGLHDDSDDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAG--------GDPDCVA----------NSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISSHAFHFHPVHGPLPAP 363
            E +SRVLIPN KIGAVIGK GAI+KHIRE SGA+VTISD+        G      +R++   G+F +V  AF  IL+HA     + DP+ GLA         G+    A          + FR+LI + KAG LIGR G TIKAIR+ SGARI+ISSH      + G LP P
Sbjct:  293 EAMSRVLIPNAKIGAVIGKGGAIVKHIRECSGARVTISDAGDDAGWAGGGGPGGGERLLHIIGSFFAVVTAFGAILAHA-ETPSNGDPLPGLAALVASGMLSGEATSAAALEAALPLPPSGFRMLISSAKAGALIGRAGATIKAIRDASGARIDISSH------LAGGLPVP 457          
BLAST of mRNA_P-fluviatile_contig6.12616.1 vs. uniprot
Match: A0A7S3JWP9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWP9_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 7.990e-12
Identity = 48/138 (34.78%), Postives = 73/138 (52.90%), Query Frame = 0
Query:  214 GMETVSRVLIPNCKIGAVIGKAGAIIKHIREVSGAKVTISDSCTGLHDDS---DDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISS 348
            G    +++LIPN K+G VIGK GA+I HIRE S A + I++     ++ S    +R++T  G F +V  AF  +  H        DP        P  +  +  +L+P  K GGLIGR G +I  +R  SGA +++ +
Sbjct:  153 GRTIEAKLLIPNTKVGIVIGKGGAMINHIRESSKASLDIAEPGQQNNNQSALPQERVLTFNGDFAAVYTAFQMVQQHLSVASQQQDPNNSTVV-PPSLIETT--ILVPRNKTGGLIGRSGASINRVRNDSGATVKVGA 287          
BLAST of mRNA_P-fluviatile_contig6.12616.1 vs. uniprot
Match: A0A7S4F4T8_CHRCT (Hypothetical protein (Fragment) n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F4T8_CHRCT)

HSP 1 Score: 75.5 bits (184), Expect = 1.390e-11
Identity = 49/139 (35.25%), Postives = 79/139 (56.83%), Query Frame = 0
Query:  218 VSRVLIPNCKIGAVIGKAGAIIKHIREVSGAKVTISDSCTGLHDDSDDRMVTAAGTFNSVQLA---FTHILSHAGAVGPDA-----DPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISS 348
            V R++IPN ++G +IGK GA IK IRE+SG K+ I+D   G    S +R+V+  G+   V  A      ++   G+   D      +P M   G      +++ +L++ N + GG+IG+GG  IK +RE+SGA I++ +
Sbjct:   38 VLRLMIPNTQVGTIIGKGGANIKGIRELSGCKMQIADMVIG----STERLVSITGSVTGVTKAVELMLGVIEEPGSKTSDGGSSALNPEMASEGTGQ---SHTLKLVLNNNQVGGIIGKGGSMIKQMREESGAFIKVEA 169          
BLAST of mRNA_P-fluviatile_contig6.12616.1 vs. uniprot
Match: A0A8J9SBP1_9CHLO (Poly(RC)-binding protein 3 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SBP1_9CHLO)

HSP 1 Score: 73.9 bits (180), Expect = 5.050e-11
Identity = 50/141 (35.46%), Postives = 76/141 (53.90%), Query Frame = 0
Query:  214 GMETVSRVLIPNCKIGAVIGKAGAIIKHIREVSGAKVTISDSCTGLHDDSDDRMVTAAGTFN------SVQLAF--THILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEI 346
            G ETV R+L+ + K+G+VIGKAGAI+K IR+ +GA++ + +       + D+R++  +G  +      S Q A    H   H    GP+  P              + R+L+ + +AG LIG+ G  IK IRE SGA I+I
Sbjct:   89 GAETVYRLLVQSKKVGSVIGKAGAIVKQIRDETGARIRVVEGVP----NCDERVIVISGRVDPGRHTDSAQEALYKVHARVHETEDGPNGPPANA-----------TTRMLVCHTQAGCLIGKAGAIIKEIREASGAHIKI 214          
BLAST of mRNA_P-fluviatile_contig6.12616.1 vs. uniprot
Match: A0A197JCP8_9FUNG (Uncharacterized protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JCP8_9FUNG)

HSP 1 Score: 74.3 bits (181), Expect = 5.310e-11
Identity = 48/130 (36.92%), Postives = 72/130 (55.38%), Query Frame = 0
Query:  217 TVSRVLIPNCKIGAVIGKAGAIIKHIREVSGAKVTISDSCTGLHDDSDDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGD--PDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARI 344
            T  R L+   + G +IGK+G  +K IRE+SGA+V IS+   G    + +R++T  G  ++V  AF+ I             +   AGGD  P+  + + R+L  N K G +IG+GG  IK ++E SGARI
Sbjct:   13 TTIRALVSTKEAGVIIGKSGKNVKDIRELSGARVNISEMIPG----AVERVLTVVGPLDAVAKAFSLIAKTT---------IAEQAGGDVEPESESTTMRILAGNHKMGSVIGKGGSKIKEVQEASGARI 129          
BLAST of mRNA_P-fluviatile_contig6.12616.1 vs. uniprot
Match: A0A199W9R2_ANACO (Protein BTR1 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A199W9R2_ANACO)

HSP 1 Score: 73.6 bits (179), Expect = 1.080e-10
Identity = 47/138 (34.06%), Postives = 73/138 (52.90%), Query Frame = 0
Query:  220 RVLIPNCKIGAVIGKAGAIIKHIREVSGAKVTISDSCTGLHDDSDDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISSHAFHFHPVH 357
            R L+ N   G++IGK GA I  I+  SGA++ +S +       + DR++  +G+F+ V  A   IL    A   ++  V            +  RL++PN   GG+IG+GG TIK++ E S A I+IS    HF+ +H
Sbjct:   38 RFLVSNTAAGSIIGKGGASINEIQSQSGARIQLSRN-NECFPGTSDRIIMISGSFDEVIRAMELILEKLVAEAEESSDVES---------RSKVRLVVPNSSCGGIIGKGGSTIKSLIEDSHAGIKISPQDNHFNGLH 165          
BLAST of mRNA_P-fluviatile_contig6.12616.1 vs. uniprot
Match: A0A813JW02_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JW02_POLGL)

HSP 1 Score: 73.6 bits (179), Expect = 1.240e-10
Identity = 50/141 (35.46%), Postives = 77/141 (54.61%), Query Frame = 0
Query:  212 NLGMETVSRVLIPNCKIGAVIGKAGAIIKHIREVSGAKVTISDSCTGLHDDSDDRMVTAAG----TFNSVQLAFTHILSHA-GAVGPDADPVMGLAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEIS 347
            N+ M  + + L P     A+IGK GA+I  IRE +G+K+ +++    ++  +D R+VT       + N V   F   L+    +VGP +D +    G + D      ++L+P    GG+IG+GG TIK IRE SGAR+ IS
Sbjct:   36 NVSMPFIMKYLAPEVYASAIIGKGGAVIAAIREATGSKIGLTEHGE-VYPSTDARVVTVQANTEKSLNEVSKEFVSKLAELLKSVGP-SDAI----GSEGDL---KIKVLVPRAAVGGVIGKGGATIKEIRESSGARVSIS 167          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKQ4_ECTSI8.290e-13572.62Poly(Rc) binding protien (Partial) (Fragment) n=1 ... [more]
A0A6H5L8U0_9PHAE3.340e-6180.54KH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A836CIH4_9STRA6.090e-2949.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z8V5_9STRA8.700e-2547.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3JWP9_9STRA7.990e-1234.78Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S4F4T8_CHRCT1.390e-1135.25Hypothetical protein (Fragment) n=2 Tax=Chrysotila... [more]
A0A8J9SBP1_9CHLO5.050e-1135.46Poly(RC)-binding protein 3 n=1 Tax=Coccomyxa sp. O... [more]
A0A197JCP8_9FUNG5.310e-1136.92Uncharacterized protein n=1 Tax=Linnemannia elonga... [more]
A0A199W9R2_ANACO1.080e-1034.06Protein BTR1 n=2 Tax=Ananas comosus TaxID=4615 Rep... [more]
A0A813JW02_POLGL1.240e-1035.46Hypothetical protein n=1 Tax=Polarella glacialis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 215..289
e-value: 1.2E-11
score: 54.7
coord: 309..433
e-value: 0.0035
score: 26.6
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 313..347
e-value: 2.5E-9
score: 36.8
coord: 219..285
e-value: 6.5E-13
score: 48.3
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 309..357
e-value: 6.0E-12
score: 47.2
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 213..290
e-value: 3.0E-17
score: 63.9
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 216..287
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 312..349
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 216..346
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 216..284
score: 15.598
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 310..346
score: 12.622

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:2873012..2876932 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12616.1mRNA_P-fluviatile_contig6.12616.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 2873012..2876932 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12616.1 ID=prot_P-fluviatile_contig6.12616.1|Name=mRNA_P-fluviatile_contig6.12616.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=437bp
MIMDPGPPNHYMPHPFVRAQQQQQQQEQVYHNSSGGGNNNSIGGSSLHRG
DIPPAPTPHHSHGPPPPGWIERQRSTPTNGSTGNNQNPLRRSPRGSSTSA
SFRFDGGIYASTAHHIMHQRHFGGGGGGSLSSQQQQQQRGVPSPRAGGPM
AAGRGTPPPMRPLPPNAGGGIGLRRRPEQLMVGPLGDPVFAGSSGACGGG
GGMGLGWGEGNNLGMETVSRVLIPNCKIGAVIGKAGAIIKHIREVSGAKV
TISDSCTGLHDDSDDRMVTAAGTFNSVQLAFTHILSHAGAVGPDADPVMG
LAGGDPDCVANSFRLLIPNVKAGGLIGRGGCTIKAIREQSGARIEISSHA
FHFHPVHGPLPAPAHNSPTSSQGGSGHHVSPLNGGGPPNGGGAGVGGGGD
GGPRGVGGNNGRFGPNIPLPPPILMDRVMTAMGSFDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf