mRNA_P-fluviatile_contig1.14.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.14.1
Unique NamemRNA_P-fluviatile_contig1.14.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig1.14.1 vs. uniprot
Match: A0A6H5JP45_9PHAE (BPL/LPL catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP45_9PHAE)

HSP 1 Score: 449 bits (1155), Expect = 6.160e-156
Identity = 215/292 (73.63%), Postives = 240/292 (82.19%), Query Frame = 1 
Query:    1 MERVLRVLRLKFVPIFQQLCIEEALFYKTTANWLLLNEGHPDATPTVVLGISGKPEKMCNLELIQRDKVPLIKRFSGGGTVIVDGSTMFASLIMSQEDVPECKPYPREIMDWSKRIYGPAFRSMTTKSDVQLGLRENDYVFGDLKFGGNAQAITKGRWLHHTSFLWDFDPANMLYLQLPEKRPRYRGNRDHAAFLTPLRNHIDSREDCWPALKAAASEHFVLEEASIGDVPGVSGAGEKGRGDSNSSSG-----------------GWMEACRTKFIGLDGKPLPPPPGGHD 825
            M RVLRVLRLK VPIFQQLCIEE LFYKTT+NWL+LNEGHP+A PTVVLGISGKPEKMCNLEL++RDK+PLIKRFSGGGTVI+DG+T+F SLIM+Q DVPECKP+PREIMDWSK IYGPAFRS+  K +++LGLRENDYVF DLKFGGNAQAITKGRWLHHTSFLWDFDP NMLYLQ+PEKRP+YRG+RDH AFLTPL++H+  RED W ALKAAA EHFVLEEASI DV            D++ SS                   WMEACRTKF+GLDGK +PPPPGGHD
Sbjct:    1 MARVLRVLRLKHVPIFQQLCIEEVLFYKTTSNWLVLNEGHPEAQPTVVLGISGKPEKMCNLELVERDKIPLIKRFSGGGTVIIDGNTIFTSLIMNQADVPECKPFPREIMDWSKGIYGPAFRSVVIKPELELGLRENDYVFDDLKFGGNAQAITKGRWLHHTSFLWDFDPTNMLYLQMPEKRPQYRGDRDHKAFLTPLKDHVGRREDLWAALKAAAGEHFVLEEASISDV----------LPDNHDSSNXXXXXXXXXXXXXXXGSAWMEACRTKFVGLDGKAVPPPPGGHD 282
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BLAST of mRNA_P-fluviatile_contig1.14.1 vs. uniprot
Match: A0A836CA98_9STRA (Biotin/lipoate A/B protein ligase family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA98_9STRA)

HSP 1 Score: 328 bits (842), Expect = 1.970e-108
Identity = 158/267 (59.18%), Postives = 194/267 (72.66%), Query Frame = 1 
Query:   13 LRVLRLKFVPIFQQLCIEEALFYKTTANWLLLNEGHPDATPTVVLGISGKPEKMCNLELIQRDKVPLIKRFSGGGTVIVDGSTMFASLIMSQEDVPECKPYPREIMDWSKRIYGPAFRSMTTKSD---VQLGLRENDYVFGDLKFGGNAQAITKGRWLHHTSFLWDFDPANMLYLQLPEKRPRYRGNRDHAAFLTPLRNHIDSREDCWPALKAAASEHFVLEEASIGDVPGVSGAGEKGRGDSNSSSGGWMEACRTKFIGLDGKPLP 804
            LR+ RL  +PI+ +LCIEEALFYKT+ NW + +EG P   PTVVLGISGKPE+MCNLEL+Q+D +PL++RFSGGGTVIVD  T+F SLI++Q DVP  +PYPRE+M+WSK I+GPA  ++   S    VQLGLRENDYVFGDLKFGGNAQAI+KGRWLHHTSFLW + P  M YL LPEKRP YR +R HA+FLTPL  HI  R+D  PA+  A +  F + EA   ++  +         D+   +  W  ACRTKF+G DGK LP
Sbjct:   12 LRIARLPRLPIYHRLCIEEALFYKTSDNWFVYSEGPPSDPPTVVLGISGKPERMCNLELVQQDGIPLVRRFSGGGTVIVDSDTIFTSLIVNQTDVPHVQPYPREVMEWSKGIFGPALAALAPPSGGSAVQLGLRENDYVFGDLKFGGNAQAISKGRWLHHTSFLWAYSPEVMRYLTLPEKRPAYRRDRPHASFLTPLHRHIAQRDDFCPAVVEALASQFEVREAPHAEIEDII--------DALGGAAAWAAACRTKFVGPDGKALP 270
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BLAST of mRNA_P-fluviatile_contig1.14.1 vs. uniprot
Match: A0A067CJJ7_SAPPC (BPL/LPL catalytic domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJJ7_SAPPC)

HSP 1 Score: 245 bits (625), Expect = 3.640e-76
Identity = 117/225 (52.00%), Postives = 155/225 (68.89%), Query Frame = 1 
Query:   13 LRVLRLKFVPIFQQLCIEEALFYKTTANWLLLNEGHPDATPTVVLGISGKPEKMCNLELIQRDKVPLIKRFSGGGTVIVDGSTMFASLIMSQEDVPECKPYPREIMDWSKRIYGPAFRSMTTKSDVQLGLRENDYVFGDLKFGGNAQAITKGRWLHHTSFLWDFDPANMLYLQLPEKRPRYRGNRDHAAFLTPLRNHIDSREDCWPALKAAASEHFVLEEASIGD 687
            LRVLRL+ V IF QL +EEALF     NW + NE   D  P +V+GISGKPEK+ ++E + RDKVP+IKRFSGGGTV++D +T+F + I++    P+ KPYPREIMDWS   + P F  +T K      LRE+DYVFGD KF GNAQ+I+K RWLHHTSFLWD+  ANM YLQ P K+P YR  RDH  FL  L++++ SR+  + +      +HF +++ ++ D
Sbjct:    9 LRVLRLQKVSIFDQLVLEEALFRADRDNWFIWNERTGD--PKIVMGISGKPEKLLDVEAVARDKVPVIKRFSGGGTVVIDDNTLFTTFIVNTSAKPQVKPYPREIMDWSSTFFTPLFDDIT-KHTESFALREDDYVFGDRKFAGNAQSISKDRWLHHTSFLWDYSAANMRYLQNPAKQPAYRAKRDHTEFLCKLKDYVASRDVLYQSFNHHLQQHFDVDDVTLAD 230
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BLAST of mRNA_P-fluviatile_contig1.14.1 vs. uniprot
Match: A0A485KLW0_9STRA (Aste57867_8927 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLW0_9STRA)

HSP 1 Score: 245 bits (625), Expect = 6.720e-76
Identity = 116/223 (52.02%), Postives = 158/223 (70.85%), Query Frame = 1 
Query:   13 LRVLRLKFVPIFQQLCIEEALFYKTTANWLLLNEGHPDATPTVVLGISGKPEKMCNLELIQRDKVPLIKRFSGGGTVIVDGSTMFASLIMSQEDVPECKPYPREIMDWSKRIYGPAFRSMTTKSDVQLGLRENDYVFGDLKFGGNAQAITKGRWLHHTSFLWDFDPANMLYLQLPEKRPRYRGNRDHAAFLTPLRNHIDSREDCWPALKAAASEHFVLEEASI 681
            LR+LRL+ VPIF QL +EEALF     NW + NE     +  +V+GISGKP K+ +++ + RD +P+IKRFSGGGTV+VD ST+F + I++   +P  KP+PREIM+WS   Y P F S+T  ++V   LRE+DYVFGD KFGGNAQ+I K RWLHHTSFLWD+ P+NM YLQ P K+P+YR  RDH  FL  L++ ++S+++ + A     +EHF L E ++
Sbjct:   25 LRLLRLQGVPIFDQLKLEEALFRVDRDNWFIWNER--TQSTNIVMGISGKPAKLLDVDAVARDNIPIIKRFSGGGTVVVDDSTLFTTFIVNTNALPHVKPFPREIMEWSSTFYTPLFGSLTGTNEV-FQLREDDYVFGDRKFGGNAQSIGKDRWLHHTSFLWDYQPSNMRYLQNPTKQPKYRAQRDHTEFLCKLKDVVESQDELFQAFHHQLNEHFDLTEVTL 244
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BLAST of mRNA_P-fluviatile_contig1.14.1 vs. uniprot
Match: A0A1V9YPU3_9STRA (BPL/LPL catalytic domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPU3_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.130e-74
Identity = 115/225 (51.11%), Postives = 155/225 (68.89%), Query Frame = 1 
Query:   13 LRVLRLKFVPIFQQLCIEEALFYKTTANWLLLNEGHPDATPTVVLGISGKPEKMCNLELIQRDKVPLIKRFSGGGTVIVDGSTMFASLIMSQEDVPECKPYPREIMDWSKRIYGPAFRSMTTKSDVQLGLRENDYVFGDLKFGGNAQAITKGRWLHHTSFLWDFDPANMLYLQLPEKRPRYRGNRDHAAFLTPLRNHIDSREDCWPALKAAASEHFVLEEASIGD 687
            LRVLRL+ V IF QL +EEALF     NW + NE   +  P +V+GISGKPEK+ ++E + RDK+P++KRFSGGGTV++D +T+F + I++ E  P  KPYPREIMDWS   + P F  +T  ++    LRE+DYVFGD KF GNAQ+I+K RWLHHTSFLWD+  ANM YLQ P K+P YR  RDH  FL  L++++ SR+  + A +     HF + + ++ D
Sbjct:    8 LRVLRLEHVSIFDQLVLEEALFRADRDNWFIWNERTGE--PKIVMGISGKPEKLLDVEAVGRDKIPIVKRFSGGGTVVIDDNTLFTTFIVNTEAKPLVKPYPREIMDWSATFFTPLFDDITQHTEA-FALREDDYVFGDRKFAGNAQSISKDRWLHHTSFLWDYSAANMRYLQNPAKQPAYRAKRDHTEFLCKLKDYVASRDVLFEAFERHLKLHFDVNDVTLPD 229
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BLAST of mRNA_P-fluviatile_contig1.14.1 vs. uniprot
Match: A0A024TNK3_9STRA (BPL/LPL catalytic domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNK3_9STRA)

HSP 1 Score: 241 bits (614), Expect = 2.580e-74
Identity = 113/228 (49.56%), Postives = 157/228 (68.86%), Query Frame = 1 
Query:   13 LRVLRLKFVPIFQQLCIEEALFYKTTANWLLLNEGHPDATPTVVLGISGKPEKMCNLELIQRDKVPLIKRFSGGGTVIVDGSTMFASLIMSQEDVPECKPYPREIMDWSKRIYGPAFRSM-----TTKSDVQLGLRENDYVFGDLKFGGNAQAITKGRWLHHTSFLWDFDPANMLYLQLPEKRPRYRGNRDHAAFLTPLRNHIDSREDCWPALKAAASEHFVLEEASI 681
            LR+LRL+ VPIF+QL +EEALF     NW + NE     +  +V+GISGKPE++ +++ + RDK+P+IKRFSGGGTV+VD ST+F + +++   +P+ KPYPREIM+WS   Y P F+S+     +T       LRE+DYVFGD KF GNAQ+I K RWLHHTSFLWD+ P NM YLQ P K+P+YR +RDH  FL  L++ + S++D + A       HF +++  +
Sbjct:    9 LRLLRLQGVPIFEQLKLEEALFRVDPHNWFIWNER--TKSTNIVMGISGKPERLLDVDAVARDKIPVIKRFSGGGTVVVDNSTVFTTFVINTSALPQVKPYPREIMEWSSTFYTPLFQSLLGGPRSTSHPPTFALREDDYVFGDRKFAGNAQSIGKDRWLHHTSFLWDYSPRNMQYLQNPAKQPKYRAHRDHTDFLCKLKDVVSSQDDLFHAFHRELHSHFDVDDVML 234
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BLAST of mRNA_P-fluviatile_contig1.14.1 vs. uniprot
Match: G4ZRG6_PHYSP (BPL/LPL catalytic domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4ZRG6_PHYSP)

HSP 1 Score: 233 bits (593), Expect = 2.610e-71
Identity = 116/228 (50.88%), Postives = 155/228 (67.98%), Query Frame = 1 
Query:   22 LRLKFVPIFQQLCIEEALFY-KTTANWLLLNEGHPDATPTVVLGISGKPEKMCNLELIQRDKVPLIKRFSGGGTVIVDGSTMFASLIMSQEDVPECKPYPREIMDWSKRIYGPAFRSMTTKSDVQLGLRENDYVFGDLKFGGNAQAITKGRWLHHTSFLWDFDPANMLYLQLPEKRPRYRGNRDHAAFLTPL----RNHIDSREDCWPALKAAASEHFVLEEASIGDV 690
            LRL+  PI +QL IEEALF  ++  NW + N+ HP  +PT+V+GISGKPE++ + + ++RD +P++KRFSGGGTVIVD +T+F + I  QED P  +PYPREIM WS+  + P F S      ++  LRE+DYVF D KFGGNAQ+++KGRWLHHTSFLWDFDP NM YL  P ++P+YR  R H  FL PL    R    +RE     L A  + +F +E+  + DV
Sbjct:   15 LRLR-APIQEQLLIEEALFRAESQRNWFIYNDAHP--SPTIVMGISGKPEQLLHQDAVKRDGIPVLKRFSGGGTVIVDHNTVFTTFICRQEDFPHVRPYPREIMAWSEGFFSPFF-SRVCHEHLKFSLREDDYVFDDRKFGGNAQSLSKGRWLHHTSFLWDFDPKNMEYLTNPARQPKYRQQRSHLEFLCPLKDVLRQECSNRERFESELHAELAHNFEIEDVDLEDV 238
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BLAST of mRNA_P-fluviatile_contig1.14.1 vs. uniprot
Match: A0A6A3F9M6_9STRA (BPL/LPL catalytic domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F9M6_9STRA)

HSP 1 Score: 232 bits (592), Expect = 3.570e-71
Identity = 118/228 (51.75%), Postives = 157/228 (68.86%), Query Frame = 1 
Query:   22 LRLKFVPIFQQLCIEEALFY-KTTANWLLLNEGHPDATPTVVLGISGKPEKMCNLELIQRDKVPLIKRFSGGGTVIVDGSTMFASLIMSQEDVPECKPYPREIMDWSKRIYGPAFRSMTTKSDVQLGLRENDYVFGDLKFGGNAQAITKGRWLHHTSFLWDFDPANMLYLQLPEKRPRYRGNRDHAAFLTPLR----NHIDSREDCWPALKAAASEHFVLEEASIGDV 690
            LRL+  PI +QL IEEALF  ++  NW + N+ H  AT  +V+GISGKPE++ + + +QRD VP++KRFSGGGTVIVD +T+F + I  Q+D P+ KPYPREIM WS+  + P F S     +++  LRE+DYVF D KFGGNAQ+++KGRWLHHTSFLWDFDP NM YL  P ++P+YR  R H  FL PL+    N   SRE     L+A  + +F +E+  + DV
Sbjct:   14 LRLR-APIQEQLRIEEALFRAESQRNWFVYNDAHAPAT--IVMGISGKPEQLLHQDAVQRDGVPVLKRFSGGGTVIVDHNTVFTTFICRQQDFPQVKPYPREIMAWSEGFFSPFF-SRVCHPELKFALREDDYVFDDRKFGGNAQSLSKGRWLHHTSFLWDFDPKNMEYLTNPARQPKYRQQRSHLEFLCPLKAVLKNECASRETFERELRAELAHNFEVEDVDLEDV 237
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BLAST of mRNA_P-fluviatile_contig1.14.1 vs. uniprot
Match: A0A2D4C8N1_PYTIN (BPL/LPL catalytic domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8N1_PYTIN)

HSP 1 Score: 231 bits (589), Expect = 8.590e-71
Identity = 116/232 (50.00%), Postives = 153/232 (65.95%), Query Frame = 1 
Query:   13 LRVLRLKFVPIFQQLCIEEALF-YKTTANWLLLNEGHPDATPTVVLGISGKPEKMCNLELIQRDKVPLIKRFSGGGTVIVDGSTMFASLIMSQEDVPECKPYPREIMDWSKRIYGPAFRSMTTKSDVQLGLRENDYVFGDLKFGGNAQAITKGRWLHHTSFLWDFDPANMLYLQLPEKRPRYRGNRDHAAFLTPLRN--HIDSREDCWPALKAAASEHFVLEEASIGDVPGV 699
            L  LRL  VPI +QL IEEALF      NW L NE    A PT+V+GISGKPE++ +L+ ++RD +P++KRFSGGGTVIVD +T+F + I + +  P   PYPREIM WS   + P F  +         LRE+DYVFGD KFGGNAQ+I+K RWLHHTSFLWDF+P NM YL  P ++P YR  RDH+ FL  L++   + +RE     L++  S HF +E+ S+ +V  +
Sbjct:    6 LSFLRLHRVPIHEQLRIEEALFRVDRQRNWFLYNE--ESAPPTIVMGISGKPERLLHLDSVKRDGIPVLKRFSGGGTVIVDHNTVFTTFICNVDSFPMVAPYPREIMAWSNTFFAPFFNRLVADPSRPFALREDDYVFGDRKFGGNAQSISKDRWLHHTSFLWDFNPRNMEYLTNPARQPAYRNQRDHSEFLCTLQDVLTVPTREVLASELRSELSVHFDVEDVSVDEVSDI 235
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BLAST of mRNA_P-fluviatile_contig1.14.1 vs. uniprot
Match: D0NP90_PHYIT (BPL/LPL catalytic domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=D0NP90_PHYIT)

HSP 1 Score: 231 bits (588), Expect = 1.380e-70
Identity = 115/232 (49.57%), Postives = 159/232 (68.53%), Query Frame = 1 
Query:   10 VLRVLRLKFVPIFQQLCIEEALFYK-TTANWLLLNEGHPDATPTVVLGISGKPEKMCNLELIQRDKVPLIKRFSGGGTVIVDGSTMFASLIMSQEDVPECKPYPREIMDWSKRIYGPAFRSMTTKSDVQLGLRENDYVFGDLKFGGNAQAITKGRWLHHTSFLWDFDPANMLYLQLPEKRPRYRGNRDHAAFLTPLRNHID----SREDCWPALKAAASEHFVLEEASIGDV 690
            V+  LRL+  PI +QL IEEALF   +  NW + N+ H  + PT+V+GISGKPE++ + + ++RD +P++KRFSGGGTVIVD ST+F + I   ED P+ KP+PREIM WS+  + P F S   K D++  LRE+DYV  D KFGGNAQ+++KGRWLHHTSFLWDF+P NM YL  P ++P+YR  R H  FL PL++ +     +RE     L A  + +F +E+ ++ DV
Sbjct:    9 VVNFLRLR-APIQEQLKIEEALFRADSNCNWFIYNDQH--SLPTIVMGISGKPEQLLHQDAVKRDGIPVLKRFSGGGTVIVDHSTVFTTFICKHEDFPQVKPFPREIMAWSQNFFSPFF-SRICKEDLKFSLREDDYVINDRKFGGNAQSLSKGRWLHHTSFLWDFNPKNMEYLTNPARQPKYREQRSHLEFLCPLKDVLKEECANREQFESELHAELAHNFEIEDVTLEDV 236
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JP45_9PHAE6.160e-15673.63BPL/LPL catalytic domain-containing protein n=2 Ta... [more]
A0A836CA98_9STRA1.970e-10859.18Biotin/lipoate A/B protein ligase family n=1 Tax=T... [more]
A0A067CJJ7_SAPPC3.640e-7652.00BPL/LPL catalytic domain-containing protein n=2 Ta... [more]
A0A485KLW0_9STRA6.720e-7652.02Aste57867_8927 protein n=1 Tax=Aphanomyces stellat... [more]
A0A1V9YPU3_9STRA1.130e-7451.11BPL/LPL catalytic domain-containing protein n=1 Ta... [more]
A0A024TNK3_9STRA2.580e-7449.56BPL/LPL catalytic domain-containing protein n=1 Ta... [more]
G4ZRG6_PHYSP2.610e-7150.88BPL/LPL catalytic domain-containing protein n=2 Ta... [more]
A0A6A3F9M6_9STRA3.570e-7151.75BPL/LPL catalytic domain-containing protein n=2 Ta... [more]
A0A2D4C8N1_PYTIN8.590e-7150.00BPL/LPL catalytic domain-containing protein n=2 Ta... [more]
D0NP90_PHYIT1.380e-7049.57BPL/LPL catalytic domain-containing protein n=16 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:190207..197195 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score462.6
Seed ortholog evalue1.3e-127
Seed eggNOG ortholog2880.D8LFX0
KEGG rclassRC00043,RC00070,RC00090,RC00992,RC02896
KEGG koko:K03800
KEGG ReactionR07770,R07771,R11143
KEGG Pathwayko00785,ko01100,map00785,map01100
EggNOG free text desc.lipoate-protein ligase activity
EggNOG OGsCOG0095@1,KOG3159@2759
EC6.3.1.20
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBiotin/lipoate A/B protein ligase family
Ec32 orthologEc-05_005190.1
Exons8
Model size1155
Cds size840
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815272.7736924-CDS-P-fluviatile_contig1:190206..1903041622815272.7736924-CDS-P-fluviatile_contig1:190206..190304Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 190207..190304 +
1693561328.321138-CDS-P-fluviatile_contig1:190206..1903041693561328.321138-CDS-P-fluviatile_contig1:190206..190304Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 190207..190304 +
1622815272.788629-CDS-P-fluviatile_contig1:191348..1914541622815272.788629-CDS-P-fluviatile_contig1:191348..191454Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 191349..191454 +
1693561328.3401546-CDS-P-fluviatile_contig1:191348..1914541693561328.3401546-CDS-P-fluviatile_contig1:191348..191454Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 191349..191454 +
1622815272.8050554-CDS-P-fluviatile_contig1:192382..1924661622815272.8050554-CDS-P-fluviatile_contig1:192382..192466Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 192383..192466 +
1693561328.446914-CDS-P-fluviatile_contig1:192382..1924661693561328.446914-CDS-P-fluviatile_contig1:192382..192466Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 192383..192466 +
1622815272.8191934-CDS-P-fluviatile_contig1:193579..1936321622815272.8191934-CDS-P-fluviatile_contig1:193579..193632Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 193580..193632 +
1693561328.4597669-CDS-P-fluviatile_contig1:193579..1936321693561328.4597669-CDS-P-fluviatile_contig1:193579..193632Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 193580..193632 +
1622815272.8319676-CDS-P-fluviatile_contig1:194090..1941841622815272.8319676-CDS-P-fluviatile_contig1:194090..194184Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 194091..194184 +
1693561328.4690356-CDS-P-fluviatile_contig1:194090..1941841693561328.4690356-CDS-P-fluviatile_contig1:194090..194184Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 194091..194184 +
1622815272.8443093-CDS-P-fluviatile_contig1:194579..1946901622815272.8443093-CDS-P-fluviatile_contig1:194579..194690Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 194580..194690 +
1693561328.4780777-CDS-P-fluviatile_contig1:194579..1946901693561328.4780777-CDS-P-fluviatile_contig1:194579..194690Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 194580..194690 +
1622815272.8551278-CDS-P-fluviatile_contig1:195816..1959091622815272.8551278-CDS-P-fluviatile_contig1:195816..195909Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 195817..195909 +
1693561328.4867694-CDS-P-fluviatile_contig1:195816..1959091693561328.4867694-CDS-P-fluviatile_contig1:195816..195909Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 195817..195909 +
1622815272.8653154-CDS-P-fluviatile_contig1:196679..1968801622815272.8653154-CDS-P-fluviatile_contig1:196679..196880Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 196680..196880 +
1693561328.49558-CDS-P-fluviatile_contig1:196679..1968801693561328.49558-CDS-P-fluviatile_contig1:196679..196880Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 196680..196880 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815272.877434-UTR-P-fluviatile_contig1:196880..1971951622815272.877434-UTR-P-fluviatile_contig1:196880..197195Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 196881..197195 +
1693561328.5043006-UTR-P-fluviatile_contig1:196880..1971951693561328.5043006-UTR-P-fluviatile_contig1:196880..197195Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 196881..197195 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.14.1prot_P-fluviatile_contig1.14.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 190207..196880 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.14.1

>prot_P-fluviatile_contig1.14.1 ID=prot_P-fluviatile_contig1.14.1|Name=mRNA_P-fluviatile_contig1.14.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=280bp
MERVLRVLRLKFVPIFQQLCIEEALFYKTTANWLLLNEGHPDATPTVVLG
ISGKPEKMCNLELIQRDKVPLIKRFSGGGTVIVDGSTMFASLIMSQEDVP
ECKPYPREIMDWSKRIYGPAFRSMTTKSDVQLGLRENDYVFGDLKFGGNA
QAITKGRWLHHTSFLWDFDPANMLYLQLPEKRPRYRGNRDHAAFLTPLRN
HIDSREDCWPALKAAASEHFVLEEASIGDVPGVSGAGEKGRGDSNSSSGG
WMEACRTKFIGLDGKPLPPPPGGHDPPPV*
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mRNA from alignment at P-fluviatile_contig1:190207..197195+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.14.1 ID=mRNA_P-fluviatile_contig1.14.1|Name=mRNA_P-fluviatile_contig1.14.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6989bp|location=Sequence derived from alignment at P-fluviatile_contig1:190207..197195+ (Porterinema fluviatile SAG_2381)
ATGGAGCGTGTGCTGAGAGTTCTCCGTCTGAAATTTGTGCCGATATTCCA
GCAACTGTGCATCGAAGAAGCTTTGTTCTACAAAACAACTGCGAACTGGT
GAGAGCAAGTGCGTGTAGGCGTTCAACTCCCCGCCGTCGCTGTTTCGGCA
GGGCAGAGGCCTTTGCATGACTAGGCGAGCAAGCCAGGCATCATCTTCTT
GACAAATAATTCCTGCAAGTGTACCTTACTTGTCGGCTGAGGAATCCAAC
CAGTCATCCATCCAGAGTCTCATCAAACATGCTCACGCTCAACAGGACAC
CCGGCACCGCCGCACAAGTCAGGTGTCGAGCAGCATATTTTCCCCTGACG
GCTTTGTAAGCCGTCGATTGTACCAGCCGCCGGTGTTCATGCCCCAACGA
CCTTATTTTATTATTCTCTTTTCGTGTCGTACACACGCGCTTGGCTGCGG
AGAACCTGCTTCTTATATCGTCGTTAGTTCGCGTTCAGTCCTGCAATACA
TGAGCTGGTGCTTTTAACTGAGTAGACTATGTGATCAGGGCGCGGACACA
GGCGAGAACGCGCGGAGATTTGGTGCAGAACTCCCTGCTTCGTCCGTAGA
CAACCCGTGATGGTTCTTGTGCGGCACATCACACCCGACGAAATATCAAC
GCTCACAATGTGCTGGCTCGTCATGCTCGGTCTGGACCTCAAAGATCGAC
TAGCTTCTACTGGGTCCCCTGAATCATCGAAGGACACGCAAACATCGAAG
ACGAACCCTGGATGCGTGTGGTTGTCAAACCCCGCTGGTGTTTTTTCAAA
CCGTGCGCCTGTGTTTTCATTACTGATGACTGATGCCCTGAACAGTGGTG
GGCGTTCAACTAGCTCATGTAATCGACCCATAAAGATTATTTCGTTTGCC
GGTTCCTGAACGCGTGCCCGGCAGGGAACATGGTTCTGCCTGCTCTCGAT
TTTCTGTGTTGCGTTGCGAGCGTCACGCATGTGGTGCGGTGGTTTTTCCT
CCTACGTTATGTTGCTGCTGCCTCCAACGATGTCGTTGCTGTTGCAGCTG
CTGCCGTGATTGGATTGACTACTGATAGTGTTATATCGCTGCCGCCGCCG
CTGCTGCTGCTGCTGGGTCGTACGGTTCGCGCGAGCGAGCAGGTTGCTGC
TGAATGAGGGCCACCCCGATGCGACGCCGACGGTGGTTCTGGGCATCTCC
GGCAAGCCCGAGAAGATGTGCAACCTGGAGCTCATACAGCGCGACAAGGT
ACCGTCCATTCGCTCACATGTGTATGCTGCGATTTCCATTTTTTTGCAAC
AGTGCTCTGACTTGTCGCGGGAAAACGAAAAAAAACGGAGGTACAACATC
GCACGAGACCAGTTTATAATCTATAATGTGGCCGAGGGATGCTCATTCTG
CCTCGGTCATTCGTTCATCGATCACGCTTCACTTCCAGACGGGGCGCCGG
AAATAGCAATATGATTACATCGATTATTGAGCACTCTTTCCGTCGAAGCC
ACATGTGCGGCCCATTTTCCAAGGCAACGATGCCTCAGTTTTGAAATCAC
CTTCACCAGATGGCGCTCGGAAGGTTCCTTCCTATCCCGTCGCTGCCGTT
GATACATTGCCCTCGATGGGGATGAATACACGGCTTAGCGAGGCGTATGC
CTGGCTGCGCCATCTGCACGCTCAGCTAGGTGCTATCAAATTCGAATGTG
TATCCCGCTGGCAGCTTGAGGCATCTGGCGCAGTAGACGGAGATGACGAG
GTCGCATATGATGCGTGCTATTGCACCGACCACCACACAAAAAGGAGCGG
CGCTGAAAGGATCGAGGCACGAGGGGCGACGCATCTTGCCAGGGGGAGCT
GCGCACAAGAGCGGATCAGAACTAACGGTGTCAGCGCGAAAGGACAGTGT
TTGTATGACGGCAGAAAAACATTGCATCGGGACGTTTTGGCAAAGCCATT
AGGCGCTACAGTACTGCACTGCTGCTCGCGATCTACGTGCATGCGCTCAT
CCCAGAGTAGACTTGGACGAGCACAAGCTCGCCACGATTGCAGACTCCTT
GCGGAGACTATTGTTCACAAGGCATCACCATTTTCCCGAAGAATAAGGAA
CACTCGGTCTTCCATTGACGTCGATGTTTTCCTGTATTTTCTATCGCCAC
ATTCGCTCCTACTTTGTCGAACGAAGGTGCCGTTGATCAAGAGGTTCTCG
GGCGGAGGCACCGTGATCGTGGACGGAAGCACCATGTTCGCGTCCCTTAT
CATGAGCCAGGTGAGTGGCGGGCGTTGGAAAGTGTTCGTGCGGAGGTGGG
TGGCGGGCGTTGGAAATCGTTCGTGCGGAGGTTGATGCGCGTGGGTGCAA
CACACTGTTGGCGTGCCTTACTTCTGCCCTTCTCCCGTCCTTTCCAGGGC
GGAGAGACTATCGCCATGCAAATTTGTTTTGATGCAGAAAGCTACTGTCG
ACGCTCTGCATGTAACCTCCTCGCTTTGCTGAACCCTCGAATACGATGGT
GTTTGCATTCTTGCTGGGCGCCGGCGTTTTTTTTTGCACGTCGATTGACT
ATATTTGGGTGGCATAGATATTGGCGCCTTGCGAATGCCCATGATTTCTG
GGACACCGGTACACCGCTCACGTTCTACTTACTGAGCATACAGCGTGTTC
CGTGTAATACTTGTTTCACAACAGAAGCAAGCACACCCTGGTTATGAGTT
TTTGTTTCTTTATTTTTTTCGCGGGGTGTGCTTTTTCGTAAGGGGGGTGG
TGCTTTCTAATGTAGTCCTGCAACGTTTGGGTTCGGGTATCATTTGGACT
CTTGGAAAGGGAAGAGCGTGTGCTTTCTTCCGTCGATGCGTTTTCACGTG
CGTCATGCGGTAAAGCATTCCCCCGGATAGAAACGCCACTGCGGATAAAC
AAAACGTCGATCCTGCACGCGATTCCACCACCTAGTGTCCAGCATTTTGC
ACGCTTTGACAAGGTACTCGTCAAGCAAGTCCGCGGGCCAACATTTCCGC
GAATGTTGAGGTTTTCGAGGCCGCGCGGGCACCTGCCGGGATCGCTCCCA
CGCGAAAGGGGATGCCAACGTGCCAGGAGGCAAATCGCATGTCTTTTGTC
CCTTTTTGTGGGGCCAGGGGAGGAGGGAGGGGTGAGGAGGGGTGAGGCTC
ATAGAAGGGAAGTGGCTGTTTCTTGGGCAGGGGGTCTTACGAGGAATTTC
TCCAGCTACTTTCGGCGCTTGCTGCTACGAGGTCTGAAAGCTTGATTCCT
TCACCTGGGCCTCGTTTCATCTTCTCAACCTCTGGCAATATCCCACACGC
TCCGCCGTCATTTATATGCCTATTTTCTATTACCCTCATGCCCCGGTTGC
CCTTAAACCACGCTGCGACACAGGAGGATGTTCCCGAGTGCAAACCTTAC
CCGAGAGAGATCATGGACTGGAGCAAGTGAGTCGTTGCATAATGACACAC
GGGTACAGGCTGCCTCGCATGCTGAAGTATTAGTGATTGCAGCGTCGCCG
CAGCTTCAATTGGGGTTTACAGAGCACGGCGTTACGCACGGTTTCGTGAC
GTGTTTGGAGCTGAATGAGGTGCTCATGTCCCCGTGGGTCCCCGTGTTGC
GCCACAACAGCTGGACGTACGAGTTTCCATTCCTCGAGTGGTCAAGGACT
GCCGCGCAGGGAAAACGCCGGCCGTCGATGCAGCTGTTGTTTTGTTGTGA
TGAGTCGATGCGAATTGGGTCGGTATTTGCGTTTTGCTCAACAGGTGATC
GGTTCGATCTTCCTATCGGATAGTGAGACATATCTCCCACTAGGGGGCAT
CCTCGCTGTTTCTCTCGGCAGCTTGTATTTGACCGCTCTCCGTCCCCTCC
TCGCCCCCTCTCCTCCCCCTGTCCTCTTACCAAGGAGGATCTACGGACCA
GCGTTCCGGAGCATGACCACCAAGTCGGACGTACAGCTTGGCTTAAGGGA
GAACGACTACGTTTTCGGCGATCTCAAGGTGACCGCCTCGCTTGCTTTCA
CCGTTCCATCGCTGCGGACTCGGGAGAATTTGTCTCCTTGTTTCTACGAT
CGGCGTACCGCAGGCAGGGCTGGGCGAGTGCGTGCTTGGCGACGACGTCA
GTCCCCCTCAAGCGAAAACAGATGTCCTCCTACACCGAGCAGTTAACGAA
CAGCTGGCGGATGTGACACATTTATGTTCATGAAGGCCAAAACTAGCGCA
TTTGTTTGTCTTGCTGGAATTCATCGCCGCGTTGTTCTGATTGTCTCTCG
CTCTGCCCATCTCTCTGTCTCTCTCTCTCTCTTCACACCCGTTTAATCGC
CCTTTCTCTGTCTACCCTTCTCCCCGCTCCCCCCCCTTCCTTTCTGCACG
TGTTACGCAACAAAACACAACAGTTCGGCGGAAACGCGCAGGCCATCACG
AAGGGGCGCTGGCTGCACCACACTTCGTTCCTCTGGGACTTCGACCCGGC
GAACATGCTGTATCTGCAGCTGCCGGAGAAGAGAGTGAGCGCGCGTGCAC
ATTTTTTTCTCCCTTTTCCACGCGGACATTCCGTATTCGTCGCTTGGAGT
GGTCCCACTGGTTTTCTCGTGAAACTTGCGACTGCTGGGTTGAGGGGTCA
CATCCCAGCGAGGAGGATGTCCTCAATTCGTGTTGAGTAGTTTCGGATGG
CGCCGGTGGGTCGTTCGCTCACACCGGGGGAAGCGTGAATCCGCCGGAAT
CACTGCTTGGGTCCCACAGACCCTGCGAACAGGATTTTTCATGTGGTCGC
TGATTGATTTGCCCTCGCAATCTTCTCGGAGTGTTTCGCCAAAAAAACCT
CTAATGTTGGCGTCCGGTCACTTTGTCCTCGCCTAGCCAAGTCGCAGACT
TCATCTGATTACTTGCCGGCTGGGGGGTCCATTTCAGCCCGTGCGGGATC
GGTATTATCTCGGAATGTGTTTGTGGCGACGCCATTTCAGACAGCTCACG
ACTCACGTCTTGGACACCATCCGTACGTATTTCCACGGGCACCGTTTTTT
CAACGGGTCGACATATATACCTCTTGAGTATCCTAAGCTTCCCAGCGGAG
GGAGCGGCCAGCTCTCCTGTTGTTGGCGTGAGATTCGCTTTCGGGATCGG
TCTTCGCACGGCCGCCTTTTCTAGCTTCTATCAATTTATCCTTGGGACGT
TTGCACTGCTGAAGGAAAGCACCTTCACGCAAGGTGTGAAGGCTGACTCT
CCTTCATTCGTTCGTAGAGCGGCGAGCAAACCAACGGTTTGTGAAGTCCT
CGTTCCCGAGGCCACTGGCGAATTTGTAGGCCACAGCCCGGCGACAAGCG
TCCGAGGTAGTCCGCGGTGCCCAGCCGCCCTACCTGCCGCACTCGTTGCT
GCCTTCAAGCCGTGCGGCCGAACACGCGCCCGAGGTCACCCTTGTGCATG
CTGCAACGGCGCCCCTTATGAGAACTGAACTATTTCATCGCCACCCACAC
CCTCCCTCCTGTTGTTGTTGGCCCATCTTGCTGACTTCGGATCATATGCG
TCCGACTTCTCTTGGCAAACAAAGACCTTGGACCTTTGTACAAGCTCGCT
TGCCTCGTTACCTCTTTCCTGACTGCCGTGCTTGGTCTGCCGTGCTTGGT
CTTGCTGCAGCCGCGGTACAGAGGGAATCGAGACCACGCGGCGTTCCTGA
CACCTCTGCGGAACCATATTGACAGTCGGGAAGACTGCTGGCCGGCTTTG
AAGGTGTGCCGCGTCATCATTCTCGCACAGTCCATCGCCGCTGTGTTGGC
AATTGTGCAGGTTTCCCCGGGGGAAGTTCTGGGACCGTGACGCCAGGCAA
CATGCGCCGACAATGGAACACCCTTTGCGGCCTGGCTGTATCTAGCCGGG
TTACTTCATGCTCTTCGACAAAGTCTCCCCACGTCGAATGTGTCTCCCGA
CATCTCGTTAAGCTGCAAGCCCTATCCCGTTGAAGTGCCGACTCTTGGAG
GTCCGCTTCCATTTTCCCGCTGCCTCCCTGTATCCCTACCGCCGCTCTTA
ACCGTCCCCAGCAGCGAAGTCGCCTCGGCAAGACCCCGGCAGGGCCACGC
CTGTTTTTCAAAGATGAAGGATGGCGAGGCCGATCTCGTACCGTTGGTGG
CAGGACAGTGCACATCCATGCGATGACATTTTAGGATGTTTGAAAAGTAG
CACGCGGGTTTGCTTCTTTACAATTTGCGGGAGGGGTGTGCTTCGTATTG
TCGCCCTGCTGAGTACGTTCATGTGGAACTTGTTCAAAGCACGCAAAAAA
AAACACACGCGGTGTCGTTTCGTAATTTTTTTTTGAAGGAACTTGGTTCT
TCAATCACTCGCGGTTTCCTGGGAAGTGCACGGCGATTCACGGCTTGGGT
AACGCTTCCTCCCCATTATACATAAACATGAGGGGGCGCGCACGAATACG
CAACACGCACACACTATAAATCATGCGTATTGGCCTCCTCCTGTTGTTTA
TCTTGATGTCAATCCTGATCTAGGCCGCTGCGAGCGAACACTTCGTTCTG
GAGGAGGCATCGATTGGGGATGTTCCTGGAGTCTCGGGAGCTGGTGAGAA
AGGTCGCGGCGACAGCAATAGCAGCAGCGGCGGGTGGATGGAAGCCTGCC
GCACGAAATTTATTGGGCTGGACGGGAAGCCCTTGCCACCACCACCGGGG
GGGCACGATCCGCCGCCTGTATGAAGGACAAGGATATAGGACAGAAAATT
CAAGTGAAACTCGATGCGGAAATCGAAAGTATACAGCCAAAGGATGAACG
AGTCGATGACATTTTAGGCACTTACGCTGTCGGTTGTTCTCGGGGAGCGG
GGCAGGGTTATCATCGACCCACACTGTCCCTATTTCAACCGCGGTGAAAC
CAAAGAATTAGCGTTGCATTCGTTGCCGCCAATAGCGTGCGCAAAAGGAG
CACACGAGAGTAAATGTAAGGCGGTGCGAGGAGACGGGCATGCGGTGTTA
ATGGAAAACTTCCGATCAAATCGACGGTACGGCTGAAGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:190207..197195+

>mRNA_P-fluviatile_contig1.14.1 ID=mRNA_P-fluviatile_contig1.14.1|Name=mRNA_P-fluviatile_contig1.14.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1680bp|location=Sequence derived from alignment at P-fluviatile_contig1:190207..197195+ (Porterinema fluviatile SAG_2381)
ATGGAGCGTGTGCTGAGAGTTCTCCGTCTGAAATTTGTGCCGATATTCCA
GCAACTGTGCATCGAAGAAGCTTTGTTCTACAAAACAACTGCGAACTGAT
GGAGCGTGTGCTGAGAGTTCTCCGTCTGAAATTTGTGCCGATATTCCAGC
AACTGTGCATCGAAGAAGCTTTGTTCTACAAAACAACTGCGAACTGGTTG
CTGCTGAATGAGGGCCACCCCGATGCGACGCCGACGGTGGTTCTGGGCAT
CTCCGGCAAGCCCGAGAAGATGTGCAACCTGGAGCTCATACAGCGCGACA
AGGTTGCTGCTGAATGAGGGCCACCCCGATGCGACGCCGACGGTGGTTCT
GGGCATCTCCGGCAAGCCCGAGAAGATGTGCAACCTGGAGCTCATACAGC
GCGACAAGGTGCCGTTGATCAAGAGGTTCTCGGGCGGAGGCACCGTGATC
GTGGACGGAAGCACCATGTTCGCGTCCCTTATCATGAGCCAGGTGCCGTT
GATCAAGAGGTTCTCGGGCGGAGGCACCGTGATCGTGGACGGAAGCACCA
TGTTCGCGTCCCTTATCATGAGCCAGGAGGATGTTCCCGAGTGCAAACCT
TACCCGAGAGAGATCATGGACTGGAGCAAGAGGATGTTCCCGAGTGCAAA
CCTTACCCGAGAGAGATCATGGACTGGAGCAAGAGGATCTACGGACCAGC
GTTCCGGAGCATGACCACCAAGTCGGACGTACAGCTTGGCTTAAGGGAGA
ACGACTACGTTTTCGGCGATCTCAAGGAGGATCTACGGACCAGCGTTCCG
GAGCATGACCACCAAGTCGGACGTACAGCTTGGCTTAAGGGAGAACGACT
ACGTTTTCGGCGATCTCAAGTTCGGCGGAAACGCGCAGGCCATCACGAAG
GGGCGCTGGCTGCACCACACTTCGTTCCTCTGGGACTTCGACCCGGCGAA
CATGCTGTATCTGCAGCTGCCGGAGAAGAGATTCGGCGGAAACGCGCAGG
CCATCACGAAGGGGCGCTGGCTGCACCACACTTCGTTCCTCTGGGACTTC
GACCCGGCGAACATGCTGTATCTGCAGCTGCCGGAGAAGAGACCGCGGTA
CAGAGGGAATCGAGACCACGCGGCGTTCCTGACACCTCTGCGGAACCATA
TTGACAGTCGGGAAGACTGCTGGCCGGCTTTGAAGCCGCGGTACAGAGGG
AATCGAGACCACGCGGCGTTCCTGACACCTCTGCGGAACCATATTGACAG
TCGGGAAGACTGCTGGCCGGCTTTGAAGGCCGCTGCGAGCGAACACTTCG
TTCTGGAGGAGGCATCGATTGGGGATGTTCCTGGAGTCTCGGGAGCTGGT
GAGAAAGGTCGCGGCGACAGCAATAGCAGCAGCGGCGGGTGGATGGAAGC
CTGCCGCACGAAATTTATTGGGCTGGACGGGAAGCCCTTGCCACCACCAC
CGGGGGGGCACGATCCGCCGCCTGTATGAGCCGCTGCGAGCGAACACTTC
GTTCTGGAGGAGGCATCGATTGGGGATGTTCCTGGAGTCTCGGGAGCTGG
TGAGAAAGGTCGCGGCGACAGCAATAGCAGCAGCGGCGGGTGGATGGAAG
CCTGCCGCACGAAATTTATTGGGCTGGACGGGAAGCCCTTGCCACCACCA
CCGGGGGGGCACGATCCGCCGCCTGTATGA
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