mRNA_P-fluviatile_contig11.1234.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1234.1
Unique NamemRNA_P-fluviatile_contig11.1234.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5KSI8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI8_9PHAE)

HSP 1 Score: 368 bits (945), Expect = 8.060e-117
Identity = 177/280 (63.21%), Postives = 214/280 (76.43%), Query Frame = 1
Query:  337 GDFNYSIVFDETPYRRTCFGVGIRFINKEGQITQRVLCLSMPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVINFRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAKVAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFLLPLAYDAVLAVRKGLNLTVDNSC--HFVDEVNTPNARALIKEY 1170
            GD  Y+I FDETPYR  CFG+GIRF+NKEGQITQRVL LSM S SMDFKAI+GEVMKI VD  K++R +C   MLDGC AN+ A DTL++NF NAVGV CFSHLLNNCGNEL+SE+ DKFA H+HVLLAH  NA DLW QE KV+PPKP SHRWSSR  RN   V NW   ++F+ KF   +ES+SKS+ A++  L  +R D +HQEL+ +LGFA+  D+  HL R THLLEG GFLLP AYDA+++VRKGL LT+D++    F D+VN PN  AL++EY
Sbjct:   58 GDSRYAITFDETPYRAACFGIGIRFVNKEGQITQRVLNLSMLSKSMDFKAIHGEVMKITVDEYKIDRSKCVGFMLDGCGANMKALDTLLLNFPNAVGVRCFSHLLNNCGNELSSEETDKFAGHLHVLLAHSHNARDLWLQETKVSPPKPVSHRWSSRYVRNNALVLNWQQMKTFVDKFTSTEESRSKSAAAMREELGRVRPDGVHQELILQLGFAVTVDVGIHLVRATHLLEGDGFLLPEAYDAIVSVRKGLALTLDSNVPPRFEDKVNMPNVNALVREY 337          
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5KEG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG8_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 2.680e-95
Identity = 171/301 (56.81%), Postives = 205/301 (68.11%), Query Frame = 1
Query:  337 GDFNYSIVFDETPYRRTCFGVGIRFINKEGQITQRVLCLSMPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVINFRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAK-VAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFL-LPLAYDAVLAVRKGLNLTVDNSCHFVDEVNTPNARALIKEYC--LGCDEDV*RRSIWSARYA 1227
            GD  YSI F+ETPYR  CFGVGIRFI K G+ITQRVL LSM S SMDF AINGEVMK++VD  +L+R +C   MLDGCSANL A DTL +NFR A GV CFSHL  N GNE+ S+D DKFA H+H LL+H  NA+DLW QE   VAPPKP SHRWSSR  RN   V NW   +SF+ KF   DESKSKS+ A++  LA +R D IHQELV +L FA+A+D+  HLTR THLLEG GFL L L+ + +L  +              ++VNTPN  AL++EY   L  DE+V    +W  + A
Sbjct:  341 GDSRYSITFNETPYRAACFGVGIRFITKAGKITQRVLSLSMLSKSMDFAAINGEVMKVVVDDYRLDRQKCVGFMLDGCSANLKALDTLKMNFRIATGVRCFSHLCKNSGNEMNSDDTDKFAGHLHTLLSHSHNAKDLWLQETGGVAPPKPPSHRWSSRFERNDCLVRNWQQMKSFVNKFTSADESKSKSAAAMRDTLAHVRPDNIHQELVLQLEFAVAADVGIHLTRATHLLEGDGFLGLALSLNPLLPGQ------------LENKVNTPNVNALVREYANSLNVDENV---KLWLKKMA 626          
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5JNC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNC2_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 2.170e-94
Identity = 147/248 (59.27%), Postives = 183/248 (73.79%), Query Frame = 1
Query:  457 MPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVINFRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAKVAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFLLPLAYDAVLAVRKGLNLTVDNSC--HFVDEVNTPNARALIKEYCLGCDEDV 1194
            M S SMDFKAI+GEVMKI VD  K++R +C   MLDGC AN+ A DTL++NF NAVGV CFSHLLNNCGNEL+SE+ DKFA H+HVLLAH  NA DLW QE KV+PPKP SHRWSSR  RN   V NW   ++F+ KF   +ES+S S+ A++  L  +R D +HQEL+ +LGFA+A D+  HL R THLLEG GFLLP AYDA+++VRKGL LT+D++    F D+VN PN  AL++EY    + +V
Sbjct:    1 MLSKSMDFKAIHGEVMKITVDEYKIDRSKCVGFMLDGCGANMKALDTLLLNFPNAVGVRCFSHLLNNCGNELSSEETDKFAGHLHVLLAHSHNARDLWLQETKVSPPKPVSHRWSSRYVRNNALVLNWQQMKTFVDKFTSTEESRSNSAAAMREELGRVRLDGVHQELILQLGFAVAVDVGIHLVRPTHLLEGDGFLLPEAYDAIVSVRKGLALTLDSNVPPRFEDKVNMPNVNALVREYSNSVNANV 248          
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5JW81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW81_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 7.120e-74
Identity = 139/261 (53.26%), Postives = 171/261 (65.52%), Query Frame = 1
Query:  457 MPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVINFRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAK-VAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFL-LPLAYDAVLAVRKGLNLTVDNSCHFVDEVNTPNARALIKEYC--LGCDEDV*RRSIWSARYA 1227
            M S SMDF AINGEVMK++VD  +L+R +C   MLDGCSANL A DTL +NFR A GV CFSHL  N GNE+ S+D  KFA H+H LL+H  NA+DLW QE   VAPPKP SHRWSSR  RN   V +W   +SF+ KF   DESKSKS+ A++  LA +R D IHQELV +L F +A+D+  HLTR THLLEG GFL L L+ + +L  +              D+VNTPN  AL++EY   L  DE+V    +W  + A
Sbjct:    1 MLSNSMDFAAINGEVMKVVVDDYRLDRQKCVGFMLDGCSANLKALDTLKMNFRIATGVRCFSHLCKNSGNEMNSDDTHKFAGHLHTLLSHSHNAKDLWLQETGGVAPPKPPSHRWSSRFERNDCLVRSWQQMKSFVNKFTSADESKSKSAAAMRDMLAHVRPDNIHQELVLQLEFVVAADVGIHLTRATHLLEGDGFLGLALSLNPLLPGQ------------LEDKVNTPNVNALVREYANSLNVDENV---KLWLKKMA 246          
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5JIR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR3_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 3.570e-72
Identity = 134/281 (47.69%), Postives = 176/281 (62.63%), Query Frame = 1
Query:  337 GDFNYSIVFDETPYRRTCFGVGIRFINKEGQITQRVLCLSMPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVINFRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAKVAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFLLPLAYDAVLAVRKGLNLTVDNSCHFVDEVNTPNARALIKEYCLG 1179
            GD  Y++ FD TPYR  CFG+GIRFI  +GQI QR+L LSM + SMD+KAI GE+ K++    KL  +RCR  MLDGCS NL A   L  +  N+VG+ C SHLLN  GN++ S  IDKFA  +  +L+H  NA D WR+     PPK  +HRW S   RN + V NW   ++FI  F+ +DE++S+ +   +  LA   K   HQE+  ++ FA+A DL +HLT  T+LLEG G LLP+AY+ +L VR GL LT      F D  + PN  ALI+EY  G
Sbjct:  308 GDGTYTVCFDGTPYRCECFGIGIRFIGPDGQICQRLLGLSMLANSMDYKAIFGELNKVVFMEYKLRPERCRGFMLDGCSPNLKALVALTTHCANSVGIRCASHLLNLSGNQMESSQIDKFAGALQTVLSHSHNAADQWRKATGTTPPKAPNHRWGSAYERNNLLVTNWQQMKTFIDDFSSSDETRSRKADFCRRELARFGKHGYHQEVWLQIEFAVAVDLGKHLTNGTYLLEGDGMLLPVAYEVILRVRAGLALTRMADGSF-DRPHLPNVDALIREYTKG 587          
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5L6R8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R8_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 3.090e-51
Identity = 110/276 (39.86%), Postives = 154/276 (55.80%), Query Frame = 1
Query:  337 GDFNYSIVFDETPYRRTCFGVGIRFINKEGQITQRVLCLSMPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVIN-FRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAKVAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFLLPLAYDAVLAVRKGLNLTVDNSCHFVDEVNTPNARALI 1161
            G+ NY++ FD TPYR  CFG+G+RFIN+ GQ+ QRVL ++M   SM  + I G+V   + +   L   RC   MLDGC+ANL A D+L  + +R +VG+ CFSHL NN G  L   D+D+F   +H LL+H   A+ L+R+   V  P   +HRW SR  R+ +   NWP    FI  +  ND+ KSK++  L+  LA  R D   Q LV R+  A+  D+ + +T     LEG   LL  A+  +   R  L L  D    F ++V  P   A+I
Sbjct:   80 GNGNYTVCFDATPYRCECFGIGLRFINQNGQVVQRVLKIAMLKKSMSARDIVGQVNDTLGEEFNLRASRCIGFMLDGCAANLLALDSLTQHIYRKSVGIPCFSHLFNNIGTRLRFPDVDEFLGKLHTLLSHSPQAKALFREIVGVTDPPTPNHRWGSRYERDYLIAMNWPGVVKFIEAYKSNDDEKSKTATWLRSELARKRNDGKDQVLVLRMQLAVLVDVGKIVTAACIFLEGDEPLLHQAFSKIEKFRSQLELGNDGL--FKEDVALPTLDAVI 353          
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5JN03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN03_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 3.860e-47
Identity = 107/276 (38.77%), Postives = 151/276 (54.71%), Query Frame = 1
Query:  337 GDFNYSIVFDETPYRRTCFGVGIRFINKEGQITQRVLCLSMPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVIN-FRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAKVAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFLLPLAYDAVLAVRKGLNLTVDNSCHFVDEVNTPNARALI 1161
            GD NY++ FD TPYR  CFG+ +RFI+++GQ+ Q VL + M + SM  + I G+V   + +   L   RC   MLDGC+ANL A D+L  + +R ++GV CFSHL NN G  L   D++ F   +H LL+H   A+ L R+   VA P   +HRW SR  R+ +   N P    FI     NDE KS+++  L+  LA  R D  +Q LV R+  A+  D+ + +T T   LEG   LL  A+  +   R    L  D    F ++V  P   A+I
Sbjct:   80 GDGNYTVCFDPTPYRCECFGIELRFIDQKGQVVQHVLKIEMLTKSMSARDIVGQVNDTLSEEFCLKASRCIGFMLDGCTANLLALDSLTQHIYRRSLGVSCFSHLFNNIGKRLIFPDLEDFLGKLHTLLSHSPQAKALLREIVGVADPPTPNHRWGSRFERDYLVAMNSPGVVKFIEAHKSNDEDKSRTAAWLRSELARKRDDGKYQVLVLRMQLAVLVDVGKIVTATCIFLEGDEPLLHKAFSKIEKFRS--ELEPDKDGLFKEDVALPTLDAVI 353          
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5KPF8_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF8_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 3.270e-43
Identity = 92/152 (60.53%), Postives = 110/152 (72.37%), Query Frame = 3
Query: 1233 MFSVRSYTYDRIGDHVNAKERKTICLIEAARLLDFTYVEKHELLPADMDILEGVFPFVTPAVLELMLEE-DEYHIGASNTDAG*DSW---HDNRLKLPAWNNLAKDINLIQPSSAFMGSRVFSILRACTDERQQGCYSDRIAASALLKYNSR 1676
            M  VR + Y RIGDH  AKE  TI L E ARLL+FT+V+ H+L  +D+ IL  V PFVTP V+  ++EE D Y++ A+ TDAG D W   HDNRLKL AW  +AKDI LIQPSSAFM  RVFS+LRAC D+RQ+ C  DRI A+ALLKYNSR
Sbjct:    1 MHGVRYHAYARIGDHPGAKEHATIRLFEGARLLNFTFVKGHQLEESDVHILAEVLPFVTPTVVAALVEEMDAYNVAAAETDAGCDLWAFWHDNRLKLSAWYKVAKDIALIQPSSAFM-ERVFSVLRACVDDRQEHCLLDRIEAAALLKYNSR 151          
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5JZH8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH8_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 4.910e-33
Identity = 95/244 (38.93%), Postives = 125/244 (51.23%), Query Frame = 1
Query:  457 MPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVINFRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAKVAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFLLPLAYDAVLAVRKGLNLTVDNSCHFVDEVNTPNARALI-KEYCLGCD 1185
            M   SM    I GEV +I+    +L+ + CRA+M D C+ANL A D+L++ FR AV + CFSH  NN G +L  E+ID F   +H LL+H   A+DL+R+E  V  P+   HRW SR  R+ V   NWP      VKF  +D             LA +R D   Q LV +L  AL  D+   +T  T  LEG   L    Y+ +  VR  L L  D    F ++V  PN  AL+ KE   G D
Sbjct:    1 MLKKSMTGADIAGEVNRIVTHQFRLDPNNCRAVMGDSCAANLLAMDSLLLVFRFAVVIPCFSHTFNNIGKQLVCEEIDVFLGKLHTLLSHSAFAKDLFRKEVGVRAPETPGHRWGSRFERDEVIAVNWPGA----VKFMRDD-------------LAKLRDDGKAQSLVLQLQLALTVDVGRIITSATIFLEGDMPLAHKTYNVIERVRNKLELPEDGI--FSEDVPLPNVAALVAKEVGQGDD 225          
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5KCX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCX4_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 6.140e-26
Identity = 65/148 (43.92%), Postives = 96/148 (64.86%), Query Frame = 3
Query: 1239 SVRSYTYDRIGDHVNAKERKTICLIEAARLLDFTYVEKHELLPADMDILEGVFPFVTPAVLE-LMLEEDEYHIGASNTDAG*DS---WHDNRLKLPAWNNLAKDINLIQPSSAFMGSRVFSILRACTDERQQGCYSDRIAASALLKYN 1670
            ++R Y +DR+G H  A+E K + + +AA+L DF +++  +     +  L+ V PFV   +++ L+ E+++Y++ AS+TD        W DN  +LP W+ L  D+ L+QPSSAFM  RVFSIL  C +ERQ+  YSDRI ASALLKYN
Sbjct:    7 TLRQYVHDRVGRHSQAREAKILEMFKAAKLTDFVFMKSKKYSDDTIRSLK-VLPFVKSKMVKGLLKEKEDYYMAASDTDIEYGHMAFWKDNEKRLPTWHALVLDVALLQPSSAFM-ERVFSILPCCFNERQEHVYSDRICASALLKYN 152          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5KSI8_9PHAE8.060e-11763.21Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KEG8_9PHAE2.680e-9556.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNC2_9PHAE2.170e-9459.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW81_9PHAE7.120e-7453.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIR3_9PHAE3.570e-7247.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6R8_9PHAE3.090e-5139.86Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JN03_9PHAE3.860e-4738.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPF8_9PHAE3.270e-4360.53Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JZH8_9PHAE4.910e-3338.93Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCX4_9PHAE6.140e-2643.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:2798622..2801118 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score81.3
Seed ortholog evalue8.7e-13
Seed eggNOG ortholog400682.PAC_15703819
EggNOG OGs2F3H4@1,2T4GH@2759,3AMYP@33154,3C10E@33208
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size2005
Cds size897
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1234.1prot_P-fluviatile_contig11.1234.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 2799430..2800818 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815471.7206526-UTR-P-fluviatile_contig11:2798621..27994291622815471.7206526-UTR-P-fluviatile_contig11:2798621..2799429Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2798622..2799429 -
1693561951.3939528-UTR-P-fluviatile_contig11:2798621..27994291693561951.3939528-UTR-P-fluviatile_contig11:2798621..2799429Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2798622..2799429 -
1622815471.7772567-UTR-P-fluviatile_contig11:2800818..28011181622815471.7772567-UTR-P-fluviatile_contig11:2800818..2801118Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2800819..2801118 -
1693561951.4503431-UTR-P-fluviatile_contig11:2800818..28011181693561951.4503431-UTR-P-fluviatile_contig11:2800818..2801118Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2800819..2801118 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815471.73406-CDS-P-fluviatile_contig11:2799429..27994351622815471.73406-CDS-P-fluviatile_contig11:2799429..2799435Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2799430..2799435 -
1693561951.4066658-CDS-P-fluviatile_contig11:2799429..27994351693561951.4066658-CDS-P-fluviatile_contig11:2799429..2799435Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2799430..2799435 -
1622815471.7454524-CDS-P-fluviatile_contig11:2799580..27997241622815471.7454524-CDS-P-fluviatile_contig11:2799580..2799724Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2799581..2799724 -
1693561951.4146726-CDS-P-fluviatile_contig11:2799580..27997241693561951.4146726-CDS-P-fluviatile_contig11:2799580..2799724Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2799581..2799724 -
1622815471.756326-CDS-P-fluviatile_contig11:2799876..28004941622815471.756326-CDS-P-fluviatile_contig11:2799876..2800494Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2799877..2800494 -
1693561951.423149-CDS-P-fluviatile_contig11:2799876..28004941693561951.423149-CDS-P-fluviatile_contig11:2799876..2800494Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2799877..2800494 -
1622815471.7664464-CDS-P-fluviatile_contig11:2800689..28008181622815471.7664464-CDS-P-fluviatile_contig11:2800689..2800818Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2800690..2800818 -
1693561951.434108-CDS-P-fluviatile_contig11:2800689..28008181693561951.434108-CDS-P-fluviatile_contig11:2800689..2800818Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2800690..2800818 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1234.1

>prot_P-fluviatile_contig11.1234.1 ID=prot_P-fluviatile_contig11.1234.1|Name=mRNA_P-fluviatile_contig11.1234.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=299bp
MLFPDGEGSRRDGDFNYSIVFDETPYRRTCFGVGIRFINKEGQITQRVLC
LSMPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTL
VINFRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLW
RQEAKVAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKS
SVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFLL
PLAYDAVLAVRKGLNLTVDNSCHFVDEVNTPNARALIKEYCLGCDEDV*
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mRNA from alignment at P-fluviatile_contig11:2798622..2801118-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1234.1 ID=mRNA_P-fluviatile_contig11.1234.1|Name=mRNA_P-fluviatile_contig11.1234.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2497bp|location=Sequence derived from alignment at P-fluviatile_contig11:2798622..2801118- (Porterinema fluviatile SAG_2381)
CGGAATTTCCGTCAACACCAGGGGGCGAAGTTGCCGGGTTCACAACACCT TACCAACCATATCCCTTTCATCCTGAAGAAAGAGGTGAGCCAAATTGTCG GTGCTGTTGAGCATGTTGCCATCGTGCAAGGTATTACATGCATGGGATGT TAGCCCCCGTGCCCCCCGTCGCCCGTAGCCAAATACTTCTTCGGCGCCTC TTCGCTATCTTGTGCATCCAGTCCCTGTCTTAATTGTAACCTGTTGCTGA TCACACAAGAACGTCGCTTGGCCCGCCCGCCTAACGCCTTTCGTTCGGAT ATGCTTTTTCCAGATGGAGAAGGTTCACGAAGAGATGGGGACTTCAACTA CTCAATCGTATTCGACGAGACGCCATACCGCCGTACGTGCTTCGGTGTTG GAATTCGTTTCATCAATAAGGAAGGACAGGTGATGTGCTTGCTTGAAAGA ATGCTTTATTTTAATGTTTGTGCTTTTGCAGCGATAGAAGCAGCGGACGC GACATGAGGTTGCTCGTGTGAAAAGCCGGTGGATGACCGCTAATCTCCCC TGACGCAAACGCACAACGATTTGTTTTGTTCGTCTCTATTCCCTATCTTT TGTTTTGCTTCCGCTCTTGTGAAGATCACGCAGCGAGTGCTTTGTCTGAG TATGCCGAGCACGTCCATGGACTTCAAAGCTATCAATGGCGAAGTCATGA AGATTATGGTGGACGTGGACAAGCTGAACCGGGACCGTTGCCGTGCCATC ATGCTCGACGGGTGCTCTGCCAACCTCAACGCCCACGACACGCTGGTGAT CAACTTTCGCAACGCCGTGGGCGTGTGTTGCTTCTCCCACCTCTTGAACA ACTGCGGCAACGAGCTAGCGTCCGAAGATATCGACAAGTTCGCTAGCCAT GTTCACGTTCTCTTGGCTCATGGCCAAAACGCCGAAGATTTGTGGCGGCA GGAGGCCAAGGTGGCGCCTCCGAAGCCTACTTCCCATCGCTGGTCCTCGC GTCGAACCCGAAACCTAGTTTTCGTCGAGAATTGGCCGTTAACGCGCTCC TTCATCGTGAAGTTCAACCCGAACGACGAATCCAAGTCCAAGTCGTCTGT GGCGCTGAAGCACGGGCTTGCACCTATGCGGAAGGATACGATCCACCAGG AGTTAGTGTTTAGGCTTGGCTTCGCGCTCGCCTCGGACCTTAACGAGCAC CTCACGCGTACCACGCATCTGCTGGAGGGATATGGTTTTCTTGTGAGTAC TAGTGCTCGCCGCATCGGTGCCATTTTGTCACGACGGACCCAACGAGCCT CAGATACTTCTCGTGGCTTCTCGCTGCACTCACCCTCGCCTTTTCACCTT TCATTTCCGTTCCGCAATTGTTCGATCGTGCGTGCTTATGATAGCTTCCC CTGGCGTATGATGCCGTCCTGGCTGTGCGCAAAGGGCTGAACCTGACGGT GGACAACTCCTGCCATTTCGTTGATGAAGTGAACACGCCCAACGCCCGCG CACTCATCAAGGAGTACTGCCTCGGTTGCGACGAGGACGTGAGTGCCTCT GAGGCTGAATGCATTGCCGGTATCCGCTTGCAACAATACTCCTTGTTCAT CGCCCATTTGATCTCGATTTCTCACGAGAACATCACCCTTTGATCTTGTG TCCGTTATTTGTTTTCGTTTTTTGTCTCGCAAGGTGTGACGAAGAAGTAT CTGGAGTGCAAGGTACGCTGCAACATGTTTTCGGTTCGAAGCTACACGTA CGACAGGATCGGAGACCACGTGAACGCCAAAGAGCGTAAGACCATCTGCC TGATAGAGGCCGCGCGACTCCTGGACTTCACGTACGTCGAGAAGCATGAA CTGCTGCCTGCGGACATGGACATCCTCGAGGGAGTGTTTCCATTCGTGAC ACCAGCCGTGCTCGAGCTAATGCTAGAGGAAGACGAGTACCATATCGGGG CGTCAAACACGGACGCTGGATAAGATTCGTGGCATGACAACAGGCTCAAG CTACCCGCCTGGAACAACTTGGCGAAAGACATTAATTTAATCCAACCGTC CTCCGCGTTCATGGGTAGTAGGGTGTTCTCCATCCTCCGTGCGTGTACTG ATGAGCGACAGCAGGGCTGCTACAGCGACCGCATCGCAGCGTCGGCTCTC CTGAAGTACAATAGTAGGGCACCGAAGTGTTGACGCGTTTTGCTGTCACG ATGGAGGGAAAGGATGTGCACTTACTGCGATTGTTTCTTTGCACTGCTGT GTGTGTTTCTTCGCGCGTTGAGCCTTTTTGGCGCCCCCTTGTCGTTAATC TTGCGTTGCGACTGCTTTGACATTTTTGCTGAGTGGCACGTGATGTTTGA TCTTTGATCTCTCGCTCAACAGTAGTATACGTATCGTCAAATCGACAAAA GTACGAGCGTTAAGCTGCCGTGGGGGAGAGGGGGCTGTCGTCCTGCGGCC TTGTATCCCGGGGTGTTTTTTTGTCGTGAGGCAGAAAATAAAATAAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig11:2798622..2801118-

>mRNA_P-fluviatile_contig11.1234.1 ID=mRNA_P-fluviatile_contig11.1234.1|Name=mRNA_P-fluviatile_contig11.1234.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1794bp|location=Sequence derived from alignment at P-fluviatile_contig11:2798622..2801118- (Porterinema fluviatile SAG_2381)
ATGCTTTTTCCAGATGGAGAAGGTTCACGAAGAGATGGGGACTTCAACTA
CTCAATCGTATTCGACGAGACGCCATACCGCCGTACGTGCTTCGGTGTTG
GAATTCGTTTCATCAATAAGGAAGGACAGATGCTTTTTCCAGATGGAGAA
GGTTCACGAAGAGATGGGGACTTCAACTACTCAATCGTATTCGACGAGAC
GCCATACCGCCGTACGTGCTTCGGTGTTGGAATTCGTTTCATCAATAAGG
AAGGACAGATCACGCAGCGAGTGCTTTGTCTGAGTATGCCGAGCACGTCC
ATGGACTTCAAAGCTATCAATGGCGAAGTCATGAAGATTATGGTGGACGT
GGACAAGCTGAACCGGGACCGTTGCCGTGCCATCATGCTCGACGGGTGCT
CTGCCAACCTCAACGCCCACGACACGCTGGTGATCAACTTTCGCAACGCC
GTGGGCGTGTGTTGCTTCTCCCACCTCTTGAACAACTGCGGCAACGAGCT
AGCGTCCGAAGATATCGACAAGTTCGCTAGCCATGTTCACGTTCTCTTGG
CTCATGGCCAAAACGCCGAAGATTTGTGGCGGCAGGAGGCCAAGGTGGCG
CCTCCGAAGCCTACTTCCCATCGCTGGTCCTCGCGTCGAACCCGAAACCT
AGTTTTCGTCGAGAATTGGCCGTTAACGCGCTCCTTCATCGTGAAGTTCA
ACCCGAACGACGAATCCAAGTCCAAGTCGTCTGTGGCGCTGAAGCACGGG
CTTGCACCTATGCGGAAGGATACGATCCACCAGGAGTTAGTGTTTAGGCT
TGGCTTCGCGCTCGCCTCGGACCTTAACGAGCACCTCACGCGTACCACGC
ATCTGCTGGAGGGATATGGTTTTCTTATCACGCAGCGAGTGCTTTGTCTG
AGTATGCCGAGCACGTCCATGGACTTCAAAGCTATCAATGGCGAAGTCAT
GAAGATTATGGTGGACGTGGACAAGCTGAACCGGGACCGTTGCCGTGCCA
TCATGCTCGACGGGTGCTCTGCCAACCTCAACGCCCACGACACGCTGGTG
ATCAACTTTCGCAACGCCGTGGGCGTGTGTTGCTTCTCCCACCTCTTGAA
CAACTGCGGCAACGAGCTAGCGTCCGAAGATATCGACAAGTTCGCTAGCC
ATGTTCACGTTCTCTTGGCTCATGGCCAAAACGCCGAAGATTTGTGGCGG
CAGGAGGCCAAGGTGGCGCCTCCGAAGCCTACTTCCCATCGCTGGTCCTC
GCGTCGAACCCGAAACCTAGTTTTCGTCGAGAATTGGCCGTTAACGCGCT
CCTTCATCGTGAAGTTCAACCCGAACGACGAATCCAAGTCCAAGTCGTCT
GTGGCGCTGAAGCACGGGCTTGCACCTATGCGGAAGGATACGATCCACCA
GGAGTTAGTGTTTAGGCTTGGCTTCGCGCTCGCCTCGGACCTTAACGAGC
ACCTCACGCGTACCACGCATCTGCTGGAGGGATATGGTTTTCTTCTTCCC
CTGGCGTATGATGCCGTCCTGGCTGTGCGCAAAGGGCTGAACCTGACGGT
GGACAACTCCTGCCATTTCGTTGATGAAGTGAACACGCCCAACGCCCGCG
CACTCATCAAGGAGTACTGCCTCGGTTGCGACGAGGACCTTCCCCTGGCG
TATGATGCCGTCCTGGCTGTGCGCAAAGGGCTGAACCTGACGGTGGACAA
CTCCTGCCATTTCGTTGATGAAGTGAACACGCCCAACGCCCGCGCACTCA
TCAAGGAGTACTGCCTCGGTTGCGACGAGGACGTGTGAGTGTGA
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