mRNA_P-fluviatile_contig11.1234.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5KSI8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI8_9PHAE) HSP 1 Score: 368 bits (945), Expect = 8.060e-117 Identity = 177/280 (63.21%), Postives = 214/280 (76.43%), Query Frame = 1
Query: 337 GDFNYSIVFDETPYRRTCFGVGIRFINKEGQITQRVLCLSMPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVINFRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAKVAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFLLPLAYDAVLAVRKGLNLTVDNSC--HFVDEVNTPNARALIKEY 1170
GD Y+I FDETPYR CFG+GIRF+NKEGQITQRVL LSM S SMDFKAI+GEVMKI VD K++R +C MLDGC AN+ A DTL++NF NAVGV CFSHLLNNCGNEL+SE+ DKFA H+HVLLAH NA DLW QE KV+PPKP SHRWSSR RN V NW ++F+ KF +ES+SKS+ A++ L +R D +HQEL+ +LGFA+ D+ HL R THLLEG GFLLP AYDA+++VRKGL LT+D++ F D+VN PN AL++EY
Sbjct: 58 GDSRYAITFDETPYRAACFGIGIRFVNKEGQITQRVLNLSMLSKSMDFKAIHGEVMKITVDEYKIDRSKCVGFMLDGCGANMKALDTLLLNFPNAVGVRCFSHLLNNCGNELSSEETDKFAGHLHVLLAHSHNARDLWLQETKVSPPKPVSHRWSSRYVRNNALVLNWQQMKTFVDKFTSTEESRSKSAAAMREELGRVRPDGVHQELILQLGFAVTVDVGIHLVRATHLLEGDGFLLPEAYDAIVSVRKGLALTLDSNVPPRFEDKVNMPNVNALVREY 337
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5KEG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG8_9PHAE) HSP 1 Score: 317 bits (813), Expect = 2.680e-95 Identity = 171/301 (56.81%), Postives = 205/301 (68.11%), Query Frame = 1
Query: 337 GDFNYSIVFDETPYRRTCFGVGIRFINKEGQITQRVLCLSMPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVINFRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAK-VAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFL-LPLAYDAVLAVRKGLNLTVDNSCHFVDEVNTPNARALIKEYC--LGCDEDV*RRSIWSARYA 1227
GD YSI F+ETPYR CFGVGIRFI K G+ITQRVL LSM S SMDF AINGEVMK++VD +L+R +C MLDGCSANL A DTL +NFR A GV CFSHL N GNE+ S+D DKFA H+H LL+H NA+DLW QE VAPPKP SHRWSSR RN V NW +SF+ KF DESKSKS+ A++ LA +R D IHQELV +L FA+A+D+ HLTR THLLEG GFL L L+ + +L + ++VNTPN AL++EY L DE+V +W + A
Sbjct: 341 GDSRYSITFNETPYRAACFGVGIRFITKAGKITQRVLSLSMLSKSMDFAAINGEVMKVVVDDYRLDRQKCVGFMLDGCSANLKALDTLKMNFRIATGVRCFSHLCKNSGNEMNSDDTDKFAGHLHTLLSHSHNAKDLWLQETGGVAPPKPPSHRWSSRFERNDCLVRNWQQMKSFVNKFTSADESKSKSAAAMRDTLAHVRPDNIHQELVLQLEFAVAADVGIHLTRATHLLEGDGFLGLALSLNPLLPGQ------------LENKVNTPNVNALVREYANSLNVDENV---KLWLKKMA 626
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5JNC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNC2_9PHAE) HSP 1 Score: 301 bits (772), Expect = 2.170e-94 Identity = 147/248 (59.27%), Postives = 183/248 (73.79%), Query Frame = 1
Query: 457 MPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVINFRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAKVAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFLLPLAYDAVLAVRKGLNLTVDNSC--HFVDEVNTPNARALIKEYCLGCDEDV 1194
M S SMDFKAI+GEVMKI VD K++R +C MLDGC AN+ A DTL++NF NAVGV CFSHLLNNCGNEL+SE+ DKFA H+HVLLAH NA DLW QE KV+PPKP SHRWSSR RN V NW ++F+ KF +ES+S S+ A++ L +R D +HQEL+ +LGFA+A D+ HL R THLLEG GFLLP AYDA+++VRKGL LT+D++ F D+VN PN AL++EY + +V
Sbjct: 1 MLSKSMDFKAIHGEVMKITVDEYKIDRSKCVGFMLDGCGANMKALDTLLLNFPNAVGVRCFSHLLNNCGNELSSEETDKFAGHLHVLLAHSHNARDLWLQETKVSPPKPVSHRWSSRYVRNNALVLNWQQMKTFVDKFTSTEESRSNSAAAMREELGRVRLDGVHQELILQLGFAVAVDVGIHLVRPTHLLEGDGFLLPEAYDAIVSVRKGLALTLDSNVPPRFEDKVNMPNVNALVREYSNSVNANV 248
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5JW81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW81_9PHAE) HSP 1 Score: 253 bits (645), Expect = 7.120e-74 Identity = 139/261 (53.26%), Postives = 171/261 (65.52%), Query Frame = 1
Query: 457 MPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVINFRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAK-VAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFL-LPLAYDAVLAVRKGLNLTVDNSCHFVDEVNTPNARALIKEYC--LGCDEDV*RRSIWSARYA 1227
M S SMDF AINGEVMK++VD +L+R +C MLDGCSANL A DTL +NFR A GV CFSHL N GNE+ S+D KFA H+H LL+H NA+DLW QE VAPPKP SHRWSSR RN V +W +SF+ KF DESKSKS+ A++ LA +R D IHQELV +L F +A+D+ HLTR THLLEG GFL L L+ + +L + D+VNTPN AL++EY L DE+V +W + A
Sbjct: 1 MLSNSMDFAAINGEVMKVVVDDYRLDRQKCVGFMLDGCSANLKALDTLKMNFRIATGVRCFSHLCKNSGNEMNSDDTHKFAGHLHTLLSHSHNAKDLWLQETGGVAPPKPPSHRWSSRFERNDCLVRSWQQMKSFVNKFTSADESKSKSAAAMRDMLAHVRPDNIHQELVLQLEFVVAADVGIHLTRATHLLEGDGFLGLALSLNPLLPGQ------------LEDKVNTPNVNALVREYANSLNVDENV---KLWLKKMA 246
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5JIR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR3_9PHAE) HSP 1 Score: 258 bits (658), Expect = 3.570e-72 Identity = 134/281 (47.69%), Postives = 176/281 (62.63%), Query Frame = 1
Query: 337 GDFNYSIVFDETPYRRTCFGVGIRFINKEGQITQRVLCLSMPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVINFRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAKVAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFLLPLAYDAVLAVRKGLNLTVDNSCHFVDEVNTPNARALIKEYCLG 1179
GD Y++ FD TPYR CFG+GIRFI +GQI QR+L LSM + SMD+KAI GE+ K++ KL +RCR MLDGCS NL A L + N+VG+ C SHLLN GN++ S IDKFA + +L+H NA D WR+ PPK +HRW S RN + V NW ++FI F+ +DE++S+ + + LA K HQE+ ++ FA+A DL +HLT T+LLEG G LLP+AY+ +L VR GL LT F D + PN ALI+EY G
Sbjct: 308 GDGTYTVCFDGTPYRCECFGIGIRFIGPDGQICQRLLGLSMLANSMDYKAIFGELNKVVFMEYKLRPERCRGFMLDGCSPNLKALVALTTHCANSVGIRCASHLLNLSGNQMESSQIDKFAGALQTVLSHSHNAADQWRKATGTTPPKAPNHRWGSAYERNNLLVTNWQQMKTFIDDFSSSDETRSRKADFCRRELARFGKHGYHQEVWLQIEFAVAVDLGKHLTNGTYLLEGDGMLLPVAYEVILRVRAGLALTRMADGSF-DRPHLPNVDALIREYTKG 587
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5L6R8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R8_9PHAE) HSP 1 Score: 197 bits (500), Expect = 3.090e-51 Identity = 110/276 (39.86%), Postives = 154/276 (55.80%), Query Frame = 1
Query: 337 GDFNYSIVFDETPYRRTCFGVGIRFINKEGQITQRVLCLSMPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVIN-FRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAKVAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFLLPLAYDAVLAVRKGLNLTVDNSCHFVDEVNTPNARALI 1161
G+ NY++ FD TPYR CFG+G+RFIN+ GQ+ QRVL ++M SM + I G+V + + L RC MLDGC+ANL A D+L + +R +VG+ CFSHL NN G L D+D+F +H LL+H A+ L+R+ V P +HRW SR R+ + NWP FI + ND+ KSK++ L+ LA R D Q LV R+ A+ D+ + +T LEG LL A+ + R L L D F ++V P A+I
Sbjct: 80 GNGNYTVCFDATPYRCECFGIGLRFINQNGQVVQRVLKIAMLKKSMSARDIVGQVNDTLGEEFNLRASRCIGFMLDGCAANLLALDSLTQHIYRKSVGIPCFSHLFNNIGTRLRFPDVDEFLGKLHTLLSHSPQAKALFREIVGVTDPPTPNHRWGSRYERDYLIAMNWPGVVKFIEAYKSNDDEKSKTATWLRSELARKRNDGKDQVLVLRMQLAVLVDVGKIVTAACIFLEGDEPLLHQAFSKIEKFRSQLELGNDGL--FKEDVALPTLDAVI 353
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5JN03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN03_9PHAE) HSP 1 Score: 182 bits (463), Expect = 3.860e-47 Identity = 107/276 (38.77%), Postives = 151/276 (54.71%), Query Frame = 1
Query: 337 GDFNYSIVFDETPYRRTCFGVGIRFINKEGQITQRVLCLSMPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVIN-FRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAKVAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFLLPLAYDAVLAVRKGLNLTVDNSCHFVDEVNTPNARALI 1161
GD NY++ FD TPYR CFG+ +RFI+++GQ+ Q VL + M + SM + I G+V + + L RC MLDGC+ANL A D+L + +R ++GV CFSHL NN G L D++ F +H LL+H A+ L R+ VA P +HRW SR R+ + N P FI NDE KS+++ L+ LA R D +Q LV R+ A+ D+ + +T T LEG LL A+ + R L D F ++V P A+I
Sbjct: 80 GDGNYTVCFDPTPYRCECFGIELRFIDQKGQVVQHVLKIEMLTKSMSARDIVGQVNDTLSEEFCLKASRCIGFMLDGCTANLLALDSLTQHIYRRSLGVSCFSHLFNNIGKRLIFPDLEDFLGKLHTLLSHSPQAKALLREIVGVADPPTPNHRWGSRFERDYLVAMNSPGVVKFIEAHKSNDEDKSRTAAWLRSELARKRDDGKYQVLVLRMQLAVLVDVGKIVTATCIFLEGDEPLLHKAFSKIEKFRS--ELEPDKDGLFKEDVALPTLDAVI 353
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5KPF8_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF8_9PHAE) HSP 1 Score: 169 bits (429), Expect = 3.270e-43 Identity = 92/152 (60.53%), Postives = 110/152 (72.37%), Query Frame = 3
Query: 1233 MFSVRSYTYDRIGDHVNAKERKTICLIEAARLLDFTYVEKHELLPADMDILEGVFPFVTPAVLELMLEE-DEYHIGASNTDAG*DSW---HDNRLKLPAWNNLAKDINLIQPSSAFMGSRVFSILRACTDERQQGCYSDRIAASALLKYNSR 1676
M VR + Y RIGDH AKE TI L E ARLL+FT+V+ H+L +D+ IL V PFVTP V+ ++EE D Y++ A+ TDAG D W HDNRLKL AW +AKDI LIQPSSAFM RVFS+LRAC D+RQ+ C DRI A+ALLKYNSR
Sbjct: 1 MHGVRYHAYARIGDHPGAKEHATIRLFEGARLLNFTFVKGHQLEESDVHILAEVLPFVTPTVVAALVEEMDAYNVAAAETDAGCDLWAFWHDNRLKLSAWYKVAKDIALIQPSSAFM-ERVFSVLRACVDDRQEHCLLDRIEAAALLKYNSR 151
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5JZH8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH8_9PHAE) HSP 1 Score: 142 bits (357), Expect = 4.910e-33 Identity = 95/244 (38.93%), Postives = 125/244 (51.23%), Query Frame = 1
Query: 457 MPSTSMDFKAINGEVMKIMVDVDKLNRDRCRAIMLDGCSANLNAHDTLVINFRNAVGVCCFSHLLNNCGNELASEDIDKFASHVHVLLAHGQNAEDLWRQEAKVAPPKPTSHRWSSRRTRNLVFVENWPLTRSFIVKFNPNDESKSKSSVALKHGLAPMRKDTIHQELVFRLGFALASDLNEHLTRTTHLLEGYGFLLPLAYDAVLAVRKGLNLTVDNSCHFVDEVNTPNARALI-KEYCLGCD 1185
M SM I GEV +I+ +L+ + CRA+M D C+ANL A D+L++ FR AV + CFSH NN G +L E+ID F +H LL+H A+DL+R+E V P+ HRW SR R+ V NWP VKF +D LA +R D Q LV +L AL D+ +T T LEG L Y+ + VR L L D F ++V PN AL+ KE G D
Sbjct: 1 MLKKSMTGADIAGEVNRIVTHQFRLDPNNCRAVMGDSCAANLLAMDSLLLVFRFAVVIPCFSHTFNNIGKQLVCEEIDVFLGKLHTLLSHSAFAKDLFRKEVGVRAPETPGHRWGSRFERDEVIAVNWPGA----VKFMRDD-------------LAKLRDDGKAQSLVLQLQLALTVDVGRIITSATIFLEGDMPLAHKTYNVIERVRNKLELPEDGI--FSEDVPLPNVAALVAKEVGQGDD 225
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Match: A0A6H5KCX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCX4_9PHAE) HSP 1 Score: 115 bits (288), Expect = 6.140e-26 Identity = 65/148 (43.92%), Postives = 96/148 (64.86%), Query Frame = 3
Query: 1239 SVRSYTYDRIGDHVNAKERKTICLIEAARLLDFTYVEKHELLPADMDILEGVFPFVTPAVLE-LMLEEDEYHIGASNTDAG*DS---WHDNRLKLPAWNNLAKDINLIQPSSAFMGSRVFSILRACTDERQQGCYSDRIAASALLKYN 1670
++R Y +DR+G H A+E K + + +AA+L DF +++ + + L+ V PFV +++ L+ E+++Y++ AS+TD W DN +LP W+ L D+ L+QPSSAFM RVFSIL C +ERQ+ YSDRI ASALLKYN
Sbjct: 7 TLRQYVHDRVGRHSQAREAKILEMFKAAKLTDFVFMKSKKYSDDTIRSLK-VLPFVKSKMVKGLLKEKEDYYMAASDTDIEYGHMAFWKDNEKRLPTWHALVLDVALLQPSSAFM-ERVFSILPCCFNERQEHVYSDRICASALLKYN 152 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1234.1 >prot_P-fluviatile_contig11.1234.1 ID=prot_P-fluviatile_contig11.1234.1|Name=mRNA_P-fluviatile_contig11.1234.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=299bp MLFPDGEGSRRDGDFNYSIVFDETPYRRTCFGVGIRFINKEGQITQRVLCback to top mRNA from alignment at P-fluviatile_contig11:2798622..2801118- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1234.1 ID=mRNA_P-fluviatile_contig11.1234.1|Name=mRNA_P-fluviatile_contig11.1234.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2497bp|location=Sequence derived from alignment at P-fluviatile_contig11:2798622..2801118- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:2798622..2801118- >mRNA_P-fluviatile_contig11.1234.1 ID=mRNA_P-fluviatile_contig11.1234.1|Name=mRNA_P-fluviatile_contig11.1234.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1794bp|location=Sequence derived from alignment at P-fluviatile_contig11:2798622..2801118- (Porterinema fluviatile SAG_2381)back to top |