mRNA_P-fluviatile_contig6.12385.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig6.12385.1 vs. uniprot
Match: D7G7W8_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W8_ECTSI) HSP 1 Score: 347 bits (891), Expect = 7.800e-102 Identity = 224/468 (47.86%), Postives = 300/468 (64.10%), Query Frame = 3
Query: 672 PPVPEMARVP---TSAPP-----LPKSYVERTPLLDKVVAIATAADGLDAPHVLFGMGGSGKTVLASALISDDRVRKHFRRGVFWISVGPSCNTK--DMLETLAAKMIVDHAGPVKLDSEDAGIQRLT-AWARKDPLPLLVVLDDVWGSDVVDALRYTGLKLLVTTRVRDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANTVADDCGRLALALAIVGSLPSIRKSPDGAEGWRDLHLEIMEKKRQRRGLRMATENNQDKSKSALFPVLGLSMDQLGEDAQNLLLDLVVLARGVPAPLDMLSNLWEQKDNLGAKKEADFLASRSLLQETKERGFYLFHDLMLDFVRMECDCKEQEKLVQGAVERQRQYLGQLAVVRRYYGAGEHLHTGLHALMSLWRSLDELSGTDRR-VETYTASLAKLARI-ETADAAHGYSAVGAFFELTGKYKEADPLYLRAIEIGE 2036
PPVP+MA P T+A P LP SYVER L+ +VV TAA+ +P+VL G GG+GKTVLA+A++ ++ VRK F RG+FW+ VG N K +++ LA +M V +D D ++ + A AR + +P L+VLDDVW +V+DALR TGL++LVTTR+ V G +GDM + EAR+LL K+SGAV LP EAN VA DCG L L I GSL +R++PD A WR+LH EI KR RGL MAT+++++ S+S+LFPVL LS ++L Q+ L L VLARGVPAP+ ML+NLW+ KD GAKKEA RSLL E +E ++ HD++LDF+ + C+ + +VQ AV RQ YL +L VV RY GE L G+++L+SLWR + +LSG ++ VETY ASL +L E D A+ +G F L +Y EA+PLY RA EI E
Sbjct: 187 PPVPDMAAAPAADTAAAPTVSLALPASYVERNSLISEVVGNLTAANAPRSPYVLQGSGGAGKTVLATAVVRNEEVRKRFGRGIFWLDVGRHGNLKLPALVQRLAREMDVVSEN---MDGLDDCVRDIAFAVARDNSVPRLLVLDDVWHEEVMDALRPTGLQILVTTRLASV----GRGMLVGDMEEGEARELLSKKSGAVALPVPEANQVARDCGCHPLTLVIAGSLRCVREAPDSALAWRELHSEIERIKRSSRGLEMATDSDEEPSQSSLFPVLSLSFERLKVQEQDSFLSLAVLARGVPAPVAMLANLWD-KDEKGAKKEASAFVGRSLLIEEQEA--FIVHDMLLDFI--DVMCQHESSVVQLAVMRQTHYLSRLPVVWRYCRKGESLE-GMYSLISLWRPVMKLSGNEKLDVETYEASLRELGEEHEPIDVANACMIIGDVFLLQDQYSEAEPLYQRAEEIYE 641
BLAST of mRNA_P-fluviatile_contig6.12385.1 vs. uniprot
Match: A0A6H5JSG2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG2_9PHAE) HSP 1 Score: 325 bits (833), Expect = 3.400e-96 Identity = 217/476 (45.59%), Postives = 294/476 (61.76%), Query Frame = 3
Query: 672 PPVPEMARVPTSAPP--------LPKSYVERTPLLDKVVAIATAADGLDAPHVLFGMGGSGKTVLASALISDDRVRKHFRRGVFWISVGPSCNTK--DMLETLAAKMIVDHAGPVKLDSEDAGIQRLT-AWARKDPLPLLVVLDDVWGSDVVDALRYTGLKLLVTTRVRDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANTVADDCGRLALALAIVGSLPSIRKSPDGAEGWRDLHLEIMEKKRQRRGLRMATENNQDKSKSALFPVLGLSMDQLGEDAQNLLLDLVVLARGVPAPLDMLSNLWEQKDNLGAKKEADFLASRSLLQETKERGFYLFHDLMLDFVRMECDCKEQEKLVQGAVERQRQYLGQLAVVRRYYGAGEHLHTGLHALMSLWRSLDELSGTDRR-VETYTASLAKLARI-ETADAAHGYSAVGAFFELT-------GKYKEADPLYLRAIEIGEK 2039
P VP+MA P + LP SYVER L+ +VV TAA+ +P+VL G GG+GKTVL SA++ ++ VRK F RG+FW+ VG N K ++E LA +M V +D D ++ + A AR + +P L++LDDVW +VV+ALR TGL+++VTTR+ V G +GDM EAR+LLRK+SGAV LP EAN VA DCG L LAI GSL +R++PD A WR+LH EI KR RRGL+M T+++++ S+S LFPVL LS ++L Q+ L LVVLARGVPAP+ ML+NLW+ KD GAKKEA RSLL E ER ++ HDL+LDF+ + C+ + +VQ AV RQ YL +L VV RY GE L G+++L+SLWR + +LSG ++ VE Y SL +L E D A+ +G F L G+Y EA L+ ++ + E+
Sbjct: 187 PSVPDMAAAPAAXXXXXXXVLLALPASYVERNSLISEVVGNLTAANAPRSPYVLQGSGGAGKTVLVSAVVRNEEVRKRFGRGIFWLDVGRHGNLKLPALVERLAREMDVVSEN---MDGLDDCVRDIAFAVARDNSVPRLLILDDVWHEEVVNALRPTGLQIVVTTRLASV----GRGMIVGDMEDGEARELLRKKSGAVALPAPEANQVARDCGCHPLTLAIAGSLRCVREAPDSALAWRELHSEIGRIKRSRRGLQMTTDSDEEPSQSPLFPVLRLSFERLRVQEQDSFLSLVVLARGVPAPVAMLANLWD-KDMKGAKKEASAFVGRSLLIE--EREAFVVHDLLLDFI--DVMCQHESGVVQRAVMRQTHYLSRLPVVWRYCRKGESLE-GMYSLISLWRPVMKLSGNEKLDVEAYENSLRELGEEHEPIDVANACMMIGDVFLLQVRSTWAMGEYAEAGRLHEQSQTVREE 649
BLAST of mRNA_P-fluviatile_contig6.12385.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE) HSP 1 Score: 330 bits (846), Expect = 1.310e-95 Identity = 234/607 (38.55%), Postives = 322/607 (53.05%), Query Frame = 3
Query: 234 NVDLLKPACVGLEKLFVAVEGATDAREELIELLSYCVRVVSIVLNQALLADLPAHIKEAMERVKGRIEDINNSGRLFDAKTGCILPWRRLCRHARDRAEIDGHKAHLKEIMELATQATIIDIHVTTSEIKTTTHATHDAFVRWAQGPPVPEMARVPTSAPPLPKSYVERTPLLDKVVAIATAADGLDAPHVLFGMGGSGKTVLASALISDDRVRKHFR---RGVFWISVGPSCNTKDMLETLAAKMIVDHAGPVKLDSEDAGIQRLTAWARKDPLPLLVVLDDVWGSDVVDALRYTGLKLLVTTRVRDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANTVADDCGRLALALAIVGSLPSIRKSPDGAEGWRDLHLEIMEKKRQRRGLRMATENNQDKSKSALFPVLGLSMDQLGEDAQNLLLDLVVLARGVPAPLDMLSNLWEQKDNLGAKKEADFLASRSLLQETKERGFYLFHDLMLDFVRMECDCKEQEKLVQGAVERQRQYLGQLAVVRRYYGAGEHLHTGLHALMSLWRSLDELSGTDRRVETYTASLAKLARIETADAAHGYSAVGAFFELTGKYKEADPLYLRAIEIGEKTL 2045
+V L P C L A +GAT+ E L EL+++C +V + + D I + + + ++ ++ + C L H +D I A L+ + I+DI ++ + PVP MA VP +A LP S+V+R L ++V TA D SG + L + +D+++ F RG F AAK+ P + +S + IQ LT +D LP LVVLDDVW VVD LR TGL+LLVTTR+ VVA GG T +G+M EAR+LL+ +SGA+ LP+ EA+ VA CG AL LAI GSL ++ P+ A WR L E+ + K RG +M + D +K +LFPVL LS++ LG D + L L L+VLARGV AP ML+++W+ KD++GA+ EADF S SLLQE + F L HDL+LDFVR C+ +K++ AV+RQ QYLG+LAV++ Y G+ L G ++L+ LWR L EL G VE Y ASL KL + A+ +SAVG EL G + EADP LRAIEIGEK L
Sbjct: 115 SVGPLIPVCKAFTALIEAAQGATEVVENLRELVTWCAFLVGVFIEHGKQVDNLQKIAKPLNELVSTTGELAKRAKVVAGRGKCTA----LFCHKKDAKTIASFDAKLRRLWTDIRGLAILDIQQIVIRLEERSRPV-----------PVPGMADVPAAALKLPPSHVKRVGLEAEIVNSLTATDA------------SGISWLRVGRVGEDQLQALFEALTRGAF----------------PAAKL------PPRFNSPEEIIQYLTVLVAEDKLPRLVVLDDVWERAVVDTLRPTGLRLLVTTRLDSVVAMRGGRTTVGNMDGGEARELLKSRSGAIALPKTEADQVAAACGWHALTLAIAGSLRFVKDDPNSASTWRRLASEMTQTKNSVRGPKMDADIGDDPTKKSLFPVLELSLESLGGDRERLFLSLLVLARGVSAPAPMLASIWD-KDDMGARNEADFFVSNSLLQEV-DSSFRL-HDLLLDFVRTRCE----KKIIDEAVKRQSQYLGRLAVLQDYEAKGDSLE-GFYSLIVLWRKLAELCGKQLEVEVYHASLGKLGDDVSTGASDAFSAVGRLHELEGNFAEADPFNLRAIEIGEKVL 664
BLAST of mRNA_P-fluviatile_contig6.12385.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 293 bits (751), Expect = 3.880e-82 Identity = 252/719 (35.05%), Postives = 346/719 (48.12%), Query Frame = 3
Query: 6 MQSAPASGGQVG--PAAPLGPTLTEALEATRAAVDGNRPWYEALVLRTREAE-----------ASAGQTTSEIVTLGVVKCLPLVVNAVNVDLLKPACVGLEKLFVAVEGATDAREELIELLSYCVRVVSIVLNQALLADLPAHIKEAMERVKGRIEDINNSGRLFDAKTGCILPWRRLCRHARDRAEIDGHKAHLKEIMELATQATIIDIHVTTSEIKTTTHATHDAFVRWAQGPPVPEMARVPTSAPPLPKS-YVERTPLLDKVVAIATAADGLD------APHVLFGMGGSGKTVLASALISDDRVRKHFRRGVFWISVGPSCNTK--DMLETLA-----AKMIVDHAGPVKLDSEDAGIQRLTAWARKDPLPLLVVLDDVWGSDVVDALRYTGLKLLVTTRVRDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANT----VADDCGRLALALAIVGSLPSIRKSPDGAEGWRDL--HLEIMEKKRQRRGLRMATENNQDKSKSALFPVLGLSMDQLGEDAQNLLLDLVVLARGVPAPLDMLSNLWEQKDNLGAKKEADFLASRSLLQETKERGFYLFHDLMLDFVRMECDCKEQEKLVQGAVERQRQYLGQLAVVRRY----YGAGEHLHTGLHALMSLWRSLDELSGT-DRRVETYTASLAKLARIETADA-AHGYSAVGAFFELTGKYKEADPLYLRAIEIGEKTL 2045
MQ APASGGQ G AA + PT E L+ + +PW L + R E A A TTS + LGV PLV P C + L A EGA + +++L L+S C + ++++ A +++ ++ ++ F A+ R C H D + + G + L+ I + ++D H + A + P +P+MA VPT A LP S YVER A+ ADGL AP+ + GMGG GK+VLASA + VR+HFR G+FW+ VG + +L+ LA A H P LD + Q L A A P LVVLDDVW +VVDA G K+L+TTR R VV G ++GDMT+ EA +LLRK SG V P + T V CG L L LAI GS+ +R A W +L LE + KK + RG + S++ VL S D L Q L + VLA G AP++ML NLWE +D G + +A+ L S+ LL G Y HDL+L+F + + +E+ V+ A Q QYLG+L V+ Y +GAG GL L +LWRS+++LSG + V +Y SL +L E A A Y +VG F + GKY EA+PLY R++ I EK L
Sbjct: 44 MQRAPASGGQAGLAAAAVVEPTTVERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALAWMTTSAVGVLGVASVGPLV----------PVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVVTTNELAG----FAARWAKGGKCRAFCCHRPDLSALAGFEECLRRI---GSDIALVD--------GLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERA-------AVQEVADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARG----------EQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGG-YRVHDLVLEFAKT--SIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQ---GLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQGKYAEAEPLYERSLAIQEKVL 714
BLAST of mRNA_P-fluviatile_contig6.12385.1 vs. uniprot
Match: A0A6H5J6Q8_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q8_9PHAE) HSP 1 Score: 282 bits (722), Expect = 1.030e-81 Identity = 220/629 (34.98%), Postives = 312/629 (49.60%), Query Frame = 3
Query: 234 NVDLLKPACVGLEKLFVAVEGATDAREELIELLSYCVRVVSIVLNQALLADLPAHIKEAMERVKGRIEDINNSGRLFDAKTGCILPWRRLCRHARDRAEIDGHKAHLKEIMELATQATIIDIHVTTSEIKTTTHATHDAFVRWAQGPPVPEMARVPTSAPPLPKSYVERTPLLDKVVAIATAADGLDAPHVLFGMGGSGKTVLASALISDDRVRKHFRRGVFWISVGPSCNTK--DMLETLAAKMIVDHAGPVKLDSEDAGIQRLTAWARKDPLPLLVVLDDVWGSDVVDALRYTGLKLLVTTRVRDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANTVADDCGRLALALAIVGSLPSIRKSPDGAEGWRDLHLEIMEKKRQRRGLRMATENNQDKSKSALFPVLGLSMDQLGEDAQNLLLDLVVLARGVPAPLDMLSNLW--------------EQKDNLGAKKEADFLASRSLLQETKERGFYLFHDLMLDFVRMECDCKEQEKLVQGAVERQRQYLGQLAVVRRYYGAGEHLHTGLHALMSLWRSLDELSGTDR-RVETYTASLAKLARIETADAAHGYSAVGAFFELT--------GKYKEADPLYLRAIEIGEKTL 2045
+V L P C L A +GA + + L EL+++C +V +++ H K+ +E +K + +N F A TG ELA +A ++ A ++ P+P+MA VP +A LP S+V+R L +++ T D AP+VL G+GG+GK++LAS+++ + VRKHFR G FW+ VGP + + + LA K+ P + +S + IQ LT +D LP L+VLDDV VVD LR TGL+LLVTTR+ +VA GG T +G+M + EAR+LL+ +SGA+ LPE EA+ I+G +M + + +K +LF VL LS+ LG L L LVVLARGV AP ML+++W E+ DN+GA+ EADF S SLLQE G + HDL+LDF R C+ ++++ AV+RQ QYL +LAV++ Y G+ L GL++L+ LWR L E G ++ VE Y ASL +L E+A AA +SAVG L GK EA PLY RAI I E L
Sbjct: 79 SVGPLTPVCKAFTALIEAAQGAMEVVKNLRELVTWCAFLVGVLIE---------HGKQ-VENLKAVNKPLNE----FVATTG-----------------------------ELAKRANVV--------------AGRGKMEERSRPLPLPDMADVPAAALKLPPSHVKRVGLEAEILKSLTTTDASGAPYVLLGVGGAGKSLLASSVVRTEEVRKHFRAGAFWLRVGPGGEDQLFALCDILARKVTPATKLPQQFNSLEDIIQHLTVVVAEDRLPRLMVLDDVLERAVVDTLRPTGLRLLVTTRLDSLVAVRGGRTVVGNMDRAEARELLKSKSGAIELPETEADQTK----------TILGP-------------------------------QMDADIGDNPTKESLFHVLDLSLKYLGRHQHRLFLSLVVLARGVSAPAPMLASIWDMVGLCVIKCATSLEKVDNMGARNEADFFVSNSLLQEVD--GSFRVHDLLLDFARTRCE----KEILDEAVKRQSQYLRRLAVLQDYRAKGDPLE-GLYSLIVLWRKLAEHCGNEQVEVEAYHASLGELGDDESAGAADAFSAVGRLLGLETHLYVSFQGKLDEAGPLYDRAIRIWEAAL 602
BLAST of mRNA_P-fluviatile_contig6.12385.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE) HSP 1 Score: 268 bits (685), Expect = 9.330e-78 Identity = 197/478 (41.21%), Postives = 258/478 (53.97%), Query Frame = 3
Query: 687 MARVPTSAPPLPKSYVERTPLLDKVVAIATAADGL------DAPHVLFGMGGSGKTVLASALISDDRVRKHFRRGVFWISVGPSCNTK--DMLETLAAKMIV-----DHAGPVKLDSEDAGIQRLTAWARKDPLPLLVVLDDVWGSDVVDALRYTGLKLLVTTRVRDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANT----VADDCGRLALALAIVGSLPSIRKSPDGAEGWRDL--HLEIMEKKRQRRGLRMATENNQDKSKSALFPVLGLSMDQLGEDAQNLLLDLVVLARGVPAPLDMLSNLWEQKDNLGAKKEADFLASRSLLQETKERGFYLFHDLMLDFVRMECDCKEQEKLVQGAVERQRQYLGQLAVVRRY----YGAGEHLHTGLHALMSLWRSLDELSGT-DRRVETYTASLAKLARIE-TADAAHGYSAVGAFFELTGKYKEADPLYLRAIEIGEKTL 2045
MA VP A LP+SYVER A+ ADGL AP+ + GMGG GKT+L SA++ VR+HFR GVFW+ VG +L+ LA +M H P L+S + Q L A P LVVLDDVW +VVDAL GLK+LVTTR R VV GG ++GDMT+ EA +LL K S V P E T V CG L L LAI GS+ ++ A W +L E + KK + RG + S++ VLG S D L Q L + VLA G AP++ML NLWE +D G ++EA+ L S+ LLQ G Y HDL+L+FV+ + +E++V+ A Q QYLG++ V++ Y +GAG GL L +LWRS+++LSG + V +Y ASL +L E T D A Y VG F + GK+ EA+PLY R+ I EK L
Sbjct: 1 MAAVPAGALTLPQSYVERA-------AVQEVADGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRG----------EQSSSIKVVLGTSFDALAARKQEESLKMTVLAAGALAPIEMLRNLWEIEDAEGTREEAEGLVSKCLLQAVGGSG-YRVHDLVLEFVKT--SIRAEEEMVEKATALQAQYLGRVDVLKSYGDPEHGAGNQ---GLFFLDALWRSVEKLSGDPELEVASYRASLGELESCEATEDVASSYRWVGFLFNIQGKFTEAEPLYGRSQAIQEKVL 455
BLAST of mRNA_P-fluviatile_contig6.12385.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 278 bits (712), Expect = 1.250e-76 Identity = 244/713 (34.22%), Postives = 341/713 (47.83%), Query Frame = 3
Query: 6 MQSAPASGGQVG--PAAPLGPTLTEALEATRAAVDGNRPWYEALVLRTREAE-----------ASAGQTTSEIVTLGVVKCLPLVVNAVNVDLLKPACVGLEKLFVAVEGATDAREELIELLSYCVRVVSIVLNQALLADLPAHIKEAMERVKGRIEDINNSGRLFDAKTGCILPWRRLCRHARDRAEIDGHKAHLKEIMELATQATIIDIHVTTSEIKTTTHATHDAFVRWAQGPPVPEMARVPTSAPPLPKS-YVERTPLLDKVVAIATAADGLDAPHVLFGMGGSGKTVLASALISDDRVRKHFRRGVFWISVGPSCNTK--DMLETLA-----AKMIVDHAGPVKLDSEDAGIQRLTAWARKDPLPLLVVLDDVWGSDVVDALRYTGLKLLVTTRVRDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANT----VADDCGRLALALAIVGSLPSIRKSPDGAEGWRDL--HLEIMEKKRQRRGLRMATENNQDKSKSALFPVLGLSMDQLGEDAQNLLLDLVVLARGVPAPLDMLSNLWEQKDNLGAKKEADFLASRSLLQETKERGFYLFHDLMLDFVRMECDCKEQEKLVQGAVERQRQYLGQLAVVRRY----YGAGEHLHTGLHALMSLWRSLDELSGTDR-RVETYTASLAKLARIETADA-AHGYSAVGAFFELTGKYKEADPLYLRAIEIGEKTL 2045
MQ APASG Q G AA + PT E L+ + +PW L + R E A A TTS + LGV PLV P C + L A EGA + +++L L+S C + ++++ A +++ ++ ++ F A+ R H D + + G + L+ I ++D H + A + P +P+MA VP A LP S YVER + +V TA + AP+ + GMGG GK+VLASA++ VR+HFR G+FW+ VG + +L+ LA A P LDS + Q L A LVVLDDVW +VVDA G K+L+TTR R VV G ++GD+T+ EA +LLRK SGAV P + T V CG L L LAI GS+ +R A W +L LE + KK + RG + S++ VL S D L Q L + VLA G AP++ML NLWE +D G + +A+ L S+ LL G Y HDL+L+F + + +E+ V+ A Q QYLG+L V+ Y +G G+ GL L +LWRS+++LSG V +Y ASL +L E +A A Y +VG F + KY EA+PLY R+ I EK L
Sbjct: 27 MQRAPASGDQAGLAAAAVVEPTTVERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALAWMTTSAVGVLGVASVGPLV----------PVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVATTNELAG----FAARWAKGGKCRAFFCHRPDLSALAGFEECLRRIRS---DIALVD--------GLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERA-AVQEVADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARG----------EQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGG-YRVHDLVLEFAKT--SIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQ---GLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCEATEAVATSYGSVGFLFNIQSKYAEAEPLYERSRAIQEKVL 697
BLAST of mRNA_P-fluviatile_contig6.12385.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI) HSP 1 Score: 271 bits (694), Expect = 3.390e-74 Identity = 241/710 (33.94%), Postives = 341/710 (48.03%), Query Frame = 3
Query: 6 MQSAPASGGQVGPAAP---LGPTLTEALEATRAAVDGNRPWYEALVLRTREAEA-SAGQTTSEIVTLGVVKCLPLVVNAVNVDLLKPACVGLEKLFVAVEGATDAREELIELLSYCVRVVSIVLNQALLADLPAHIKEAMERVKGRIEDINNSGRLFDAKTGCILPWRRLCRHARDRAEIDGHKAHLKEIMELATQATIIDIHVTTSEIKTTTHATHDAFVRWAQGPPVPEMARVPTSAPPLPKSYVERTPLLDKVVAIATAADGLDAP------HVLFGMGGSGKTVLASALISDDRVRKHFRRGVFWISVGPSCNTK--DMLETLAAKMIV-----DHAGPVKLDSEDAGIQRLTAW-ARKDPLPLLVVLDDVWGSDVVDALRYTGLKLLVTTRVRDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLP----EAEANTVADDCGRLALALAIVGSLPSIRKSPDGAEGWRDL--HLEIMEKKRQRRGLRMATENNQDKSKSALFPVLGLSMDQLGEDAQNLLLDLVVLARGVPAPLDMLSNLWEQKDNLGAKKEADFLASRSLLQETKERGFYLFHDLMLDFVRMECDCKEQEKLVQGAVERQRQYLGQLAVVRRY----YGAGEHLHTGLHALMSLWRSLDELSGT-DRRVETYTASLAKLARIE-TADAAHGYSAVGAFFELTGKYKEADPLYLRAIEIGEKTL 2045
MQ PAS Q G A + PT E LE + RPW L + R E A T ++ + V++ +V L P C L+ L A EGA + +++ L+S C + ++++ A + + ++ ++ F A+ R H D + + G + L+ I DI + + H A + + P + +MA VP A LP+ YVER A+ ADGL AP + + G+GG GK+VLASA++ VR+HFR G+ W+ VG +L+ LA +M V HA P LDS + Q L A A P LVVLDDVW +VVDAL G K+L+TTR VV D+GDMT+ EA +LLRK SG V P + V CG L L LAI GS+ +++ A W +L E + KK + RG + SA+ VL S D L Q L + VLA G AP++ML NLWE +D G + EA+ L ++ LL + G Y HD++L+F + + E+ V+ A Q Q+LG+L V++ Y +GAG+ GL L SLWRS+++LSG + V TY ASL +L + T D A YSAVG F+ KY EA+PL+ RA + EK L
Sbjct: 1 MQRVPASASQAGLAVATTAVEPTTVERLEHVGKLLAEKRPWPAFLHIGARATEEWEACPTLAQEALTWMTTAAVGVLDVASVGPLVPVCQALKALIEAAEGAAECEDKVQSLVSQCAFLATVLIQHGRAVGALAQVHKPIQDFVVTTNELAG----FAARWAKDGKCRAFFCHRPDLSALAGFEECLRGIRS--------DIALVDGLEQ---HQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERA-------AVQEVADGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSGTVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARG----------QQSSAIKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWEIEDAEGTRDEAEGLVNKCLLHAVGDGG-YRVHDMVLEFAKT--SIRADEETVEKATALQAQFLGRLDVLKSYRDPEHGAGDR---GLFFLDSLWRSVEKLSGDPELEVTTYRASLRELESCKATEDMASSYSAVGFLFDAQRKYIEAEPLHERAQAMQEKVL 672
BLAST of mRNA_P-fluviatile_contig6.12385.1 vs. uniprot
Match: D7FH19_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH19_ECTSI) HSP 1 Score: 258 bits (659), Expect = 5.270e-70 Identity = 220/708 (31.07%), Postives = 338/708 (47.74%), Query Frame = 3
Query: 72 EALEATRAAVDGNRPWYEALVLRTREAEASAGQTTSE-IVTLGVVKCLPLVVNAVNVDLLKPACVGLEKLFVAVEGATDAREELIELLSYCVRVVSIVLNQALLADLPAHIKEAMERVKGRIEDINNSGRLFDAKT-GCILPWRRLCRHARDRAEIDGHKAHLKEIMELATQATIIDIHVTTSEIKTTTHATHDAFVRWAQGPPVPEMARVPTSAPPLPKSYVERTPLLDKVVAIATAAD-GLDAPHVLFGMGGSGKTVLASALISDDRVRKHFRRGVFWISVGPSCNTKD---MLETLAAKMI-----VDHAGPVKLDSEDAGIQRLTAWARKDPLPLLVVLDDVWGSDVVDALRYTGLKLLVTTRVRDVVAA--EGGHTDIGDMTKPEARDLLRKQSGAVN-LPEAEANTVADDCGRLALALAIVGSLPSIRKSPDGAEGWRDLHLEIMEKKRQRRGLRMATENNQDKSKSALFPVLGLSMDQLGEDAQNLLLDLVVLARGVPAPLDMLSNLWEQKDNLGAKKEADFLASRSLLQETKERGFYLFHDLMLDFVRMECDCKEQEKLVQGAVERQRQYLGQLAVVRRYYGAGEHLHTG-LHALMSLWRSLDELSGTDRRVETYTASLAKLARI-----------------------------------ETADAAHGYSAVGAFFELTGKYKEADPLYLRAIEIGEKTL 2045
EAL ++ PW+E L LR ++ G T E I+ V L +NA N +L P V L+ L AV+GA AREE++EL YCV + +L+ A +P IK +E KG +E + + + ++ GC WRR+ +A DR GHK LK++++ + ++IK + P + +A +P AP LP +YV+RT +L++VV T A H L GMGG GKT++AS+++ DDRVR F+RG+FW+ VG KD +LE LA ++ + P + + ++ L++ +D L LVVLD+VW +VV+A TG +LVTTR R V++A G T++GDM++ +A ++L K S A LP EA VA DCG L LAL ++G+L + P WR +H ++ EK R + EN + LF + S+ L + + L + V+A W ++ NLG +R + G+ L HDL+LD++++ +L A RQ +YL +L V R+Y G ++ TG L++L++LW S L G+ Y+ SL + I E A+ + + GK EA+PL +RAIEI ++ L
Sbjct: 38 EALAEAARRMEAETPWFEKLGLRYQDVADGGGDLTVETILAFNVASGL---INAANETVLAPVFVVLKGLLGAVQGAAAAREEIVELARYCVAMSRCLLDAAKADVMPETIKSTLEEFKGEMEAVGRFVQTYGTRSSGCC--WRRMVLNAHDRDTAAGHKRKLKDLLDAVLAGLAAQTNQGLNQIK--------GMILARDPPSLGALAEIPREAPVLPTTYVQRTAMLEEVVDDLTHPHRSASATHCLLGMGGGGKTLIASSVVRDDRVRARFKRGIFWVPVGRE--GKDVALLLEHLAVELSRVPTDTPRSCPNRFSGAEEALRHLSSVCAEDGLRCLVVLDNVWNVEVVNAFASTGFHVLVTTRQRAVISAVHAGVWTEVGDMSEEDALEVLSKASQADGPLPAEEARQVALDCGMLPLALGMIGALA--KDQPLDPLSWRAVHKKLQEK----RAMFRDVENGK------LFSTMDTSVCNLPSNQREQLQLMAVMA------------FWSRR-NLGN--------ARKPVGPDMPDGYRL-HDLVLDYLQL-IVTMGGGRLAGEASSRQARYLARLGVFRQYNARGHNVSTGGLYSLVALWNSAKNLDGSVNADACYSKSLEGVKDIGITREVAWLLLLLGSYSGAEAILRKVLEGADERADELAEFGFALGTLATALQHQGKLDEANPLLVRAIEIQKRAL 695
BLAST of mRNA_P-fluviatile_contig6.12385.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI) HSP 1 Score: 251 bits (642), Expect = 7.730e-68 Identity = 191/486 (39.30%), Postives = 261/486 (53.70%), Query Frame = 3
Query: 651 FVRWAQGPPVPEMARVPTSAPPLPKSYVERTPLLDKVVAIATAADGLDAPHVLFGMGGSGKTVLASALISDDRVRKHFRRGVFWISVGPSCNTKDMLETL--------AAKMIVDHAGPVKLDSEDAGIQRLTAWARKDPLPLLVVLDDVWGSDVVDALRYTGLKLLVTTRVRDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLP----EAEANTVADDCGRLALALAIVGSLPSIRKS--PDGAEGWRDLHLEIMEKKRQRRGLRMATENNQDKSKSALFPVLGLSMDQLGEDAQNLLLDLVVLARGVPAPLDMLSNLWEQKDNLGAKKEADFLASRSLLQETKERGFYLFHDLMLDFVRMECDCKEQEKLVQGAVERQRQYLGQLAVVRRYYGAGEHLH----TGLHALMSLWRSLDELSGTDRRVET--YTASLAKLARIE-TADAAHGYSAVGAFFELTGKYKEADPLYLRAIEIGEKTL 2045
+R P +P+ A VPT A LP+SYVER + + + + L AP+++ GMGG GKTVLASAL+ V +HFR G+FW+ +G N K +L L AA H P DS + +Q L A + P LVVLDDVW +VV A GLK+LVTTR R +V GG ++GDM + EA +LL K SG V P + V D CGRL L LAI GS+P ++ DGA W +L E + ++S++ L VLG S + L + L + VLA G AP +ML NLWE +D G K+EA+ L ++ LLQ+ G Y HDL+L ++R++ K+ + V+ A Q QYLG+L VV Y G+ H GL L +LWR L++LSG D +ET Y A L +L E TA+ A+ V +++ GK+ EA+PLY R+ I EK L
Sbjct: 225 MIRDVLPPTLPQRAAVPTGALALPRSYVERPGVQEAMGDLMDPEKAL-APYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGAN-KSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSGTVGQPGDGVRTQMTKVVDRCGRLPLVLAIAGSMPVVKGKGLKDGA--WEELIEEF-------ENVTTIMWEPGEESRN-LDMVLGASFNALAARKREEFLRMAVLAPGAVAPFEMLRNLWEIQDVEGTKEEAEGLVNKCLLQDVDGVG-YRVHDLLLKYLRVKI--KQDGERVKKATALQAQYLGRLDVVMSY---GDQKHGADNQGLFGLGTLWRCLEKLSG-DPVLETASYRAILGELDSCEATAEVANCLEWVALLYDIQGKFAEAEPLYERSQTILEKVL 691 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12385.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig6.12385.1 >prot_P-fluviatile_contig6.12385.1 ID=prot_P-fluviatile_contig6.12385.1|Name=mRNA_P-fluviatile_contig6.12385.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=680bp MQSAPASGGQVGPAAPLGPTLTEALEATRAAVDGNRPWYEALVLRTREAEback to top mRNA from alignment at P-fluviatile_contig6:637895..641691+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig6.12385.1 ID=mRNA_P-fluviatile_contig6.12385.1|Name=mRNA_P-fluviatile_contig6.12385.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3797bp|location=Sequence derived from alignment at P-fluviatile_contig6:637895..641691+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig6:637895..641691+ >mRNA_P-fluviatile_contig6.12385.1 ID=mRNA_P-fluviatile_contig6.12385.1|Name=mRNA_P-fluviatile_contig6.12385.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4080bp|location=Sequence derived from alignment at P-fluviatile_contig6:637895..641691+ (Porterinema fluviatile SAG_2381)back to top |