mRNA_P-fluviatile_contig11.1228.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1228.1 vs. uniprot
Match: D8LKE1_ECTSI (Similar to retinitis pigmentosa GTPase regulator n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE1_ECTSI) HSP 1 Score: 799 bits (2064), Expect = 2.190e-270 Identity = 580/979 (59.24%), Postives = 631/979 (64.45%), Query Frame = 2
Query: 470 EEARICASIQPTPKAVALDSFMKKGDSPAFAAAGANHSVMLTSEGKLFRWGVEDGEVYRFPTGVCTQIPLPCVGISCGRKHTMALLKGGFVMTWGTGYFGQLGHGDNASYRHPRLLRRLEPQRLGEKVVQVACGGYHSAVATDAGHVFTWGFNRYGQCGNGSKDNTVPEPSLADLSAVIPPAGAGEVPKVLCGRHHSALVTSRGALYTWGACTFGKLGLHNPEKTVCKPQEVPYFSDKPLLQAAAGDFHMVALSRKREVYSWGYGAEGQGGHGSLLHMRTPRRVTSLQEVPVAQVACGPWWSMAVTVDGFCYAWGSADGGWTGLDRPAGLSVVDPGPSGERAVETQSFDSTHNVHVPALVYSLAPYKVVNVGCGGGHTLVVAERRASPPSPGVDGLPGTVGSVLSAQGGSGXXXXXXXXXXXXXXXXXXXXKASAXXXXXXXXXXXLSWDATVSSXXXXXXXXXXXXXXXXXXXFASTP---------------------------------APAARPTTASTAD---EDSAPQNQVRATGSAAAATVRAAQPTATGREAGSGRARPLSMSSVDNARQQQAAQPARSTGAIGAGAAPAKPDAAATSTMPDSGWATTPGGAKTRSKPSRRGKAAAAAAEGLIPHALENFARRLRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASVGSGGVPVXXXXXXXXXXTQPRTIQLSASWSMS------SSXRXDGXXXXXXXXPGGRTERAVIIP-----RPKSERXXXXXXXXXXXXXXXXVRSTVVDDNTG-------------HRGSDGEGQPRAGEASNGXXXXXXXXXXXXXXXXXXXXPTKTTPVGG------QEYVAKVFSYCRHGRIEEVQKALGEGFDVCRERDEYGNTLLHCAAQNGLRGMCKSVLLGGRGKGLQPLNLQNNRGNTALHYAFAFGFTRLGKYLASSGADDTLLNDQGLTCYEGLERQDFDSL 3208
+E RICAS+Q TPKAV LD F+KKGDSPAFAAAGANHS++ TSEGKLFRWGVEDG+V+ FPTGVCTQIPLPC+ + CGRKHT+AL+KGGFVM+WGTGYFGQLGHGDNASYRHPRLLRRL+PQRLGE+VVQVACGGYHSAVATDAG VFTWGFNRYGQCGNGSKDNTVPEPSL DLS V P A GEVPKVLCGRHHSALVT GALYTWGAC+FGKLGL + EKTVC PQEV +FSDKPL+QAAAGDFHMVALSRKREV+SWGYGAEGQGGHGSLLHMR PRRV+SLQEVPVAQV CGPWWSMA+TVDG+CYAWGSADGGWTGL RP GL VVDPGPS +RAVETQSFDSTHNVHVPALVYSLAPYKV+ VGCGGGHTLVVA+RRA P SPG +G PG V + + GXXXXXXXXXXXXXXXXXXXX++S X XXXXXXXXXXXXXX +S AP TAST++ E A A + A + G + DAA + +S T PGGA XXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX R AS + + + DG R E V P E R++ TG R EGQ G A XXXXXXXXXXXXXXXXXXXX G +EYVAKVFSYCRHGR+ EVQ+ALG GFDVCR RDE GNTLLHCAAQNGLRGMCKSVL GRG QPLN++NNRGNTALHYAFAFGF +LGKYLAS GADD+LLNDQGLTCYEGLERQD +SL
Sbjct: 25 KEPRICASVQETPKAVPLDRFVKKGDSPAFAAAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGA-VGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAITVDGYCYAWGSADGGWTGLTRPPGLRVVDPGPSADRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVAKRRARPVSPGTNGQPGAVPTEVPG----GXXXXXXXXXXXXXXXXXXXXESSPLMSSLSPRVPXXXXXXXXXXXXXXXXXXXXXXXXARNVSLSSVKHARQQXXXXXXXXXXXXXXXXXXXXXXXXXXRRAPTGPDVTASTSESGWESGAVDEVATAXXXXXXXXXXXXXXXXXXKWASTXXXXXXXXXXXXXXXXXXXXXXXXXAGE--------RFDAARVRSRANS--VTVPGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRRADGRRASPAHGVALPAVPAAKSDGLRSAAVAAVPRRPESPVAXXXXXRDEPPPEVTPGGRAGDRKFLSLPGGRASRSSSRTGDXXXXXXXXECAGRRRGGVEGQ--TGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRG---QPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDSLLNDQGLTCYEGLERQDLESL 983
BLAST of mRNA_P-fluviatile_contig11.1228.1 vs. uniprot
Match: K8Z8W0_NANGC (Hect domain and rld 4 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8W0_NANGC) HSP 1 Score: 362 bits (928), Expect = 5.660e-109 Identity = 180/400 (45.00%), Postives = 253/400 (63.25%), Query Frame = 2
Query: 440 DEGSGSSVAEEEARICA----SIQPTPKAVALDSFMKKGDSPAF-AAAGANHSVMLTSEGKLFRWGVEDGEVYRFPTGVCTQIPLPCVGISCGRKHTMALLKGGFVMTWGTGYFGQLGHGDNASYRHPRLLRRLEPQRLG-EKVVQVACGGYHSAVATDAGHVFTWGFNRYGQCGNGSKDNTVPEPSLADLSAVIPPAGAGEVPKVLCGRHHSALVTSRGALYTWGACTFGKLGLHNPEKTVCKPQEVPYFSDKPLLQAAAGDFHMVALSRKREVYSWGYGAEGQGGHGSLLHMRTPRRVTSLQEVPVAQVACGPWWSMAVTVDGFCYAWGSADGGWTGLDRPAGLSVVDPGPSGERAVETQSFDSTHNVHVPALVYSLAPYKVVNVGCGGGHTLVVAER 1621
D+GSG+ + + + S+ P+ +AL+ ++ + D A GA ++ LTS G ++WG +G Y P+ V +PL C+ +SCGRKH +AL++GGFV +WG GYFGQLG GDN S PRL+ L+P RLG ++VV VACGG HSAV T VF +GFNRYGQ G G N + P ++S + G+ ++ +++CGRHH++++T +G +++WGA +FG+LGL +P+K V P EVP F PL A GDFH++ L Y+WGYG+EGQGG G+ LH+RTPR V L+ +AQ+ACG WWSM VT G Y WG DGGW GL+R + L V+P P + T SFDS N +PA+V +L+ +V V GGGHT+++A R
Sbjct: 86 DDGSGAIIQGQNIHFSSQEKKSVLHLPQPLALERYVAEEDGLVQDIACGATFTIALTSRGVPYQWGTVNGRAYPEPSRVSLGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGI----GSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEAGRLYTWGYGDGGWLGLERASKLPYVEPCPPVTKYGATCSFDSDFNACLPAVVSTLSHLRVEKVVAGGGHTIIMARR 481
BLAST of mRNA_P-fluviatile_contig11.1228.1 vs. uniprot
Match: W7U0Q3_9STRA (Putative e3 ubiquitin-protein ligase herc4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0Q3_9STRA) HSP 1 Score: 362 bits (928), Expect = 1.130e-108 Identity = 180/400 (45.00%), Postives = 253/400 (63.25%), Query Frame = 2
Query: 440 DEGSGSSVAEEEARICA----SIQPTPKAVALDSFMKKGDSPAF-AAAGANHSVMLTSEGKLFRWGVEDGEVYRFPTGVCTQIPLPCVGISCGRKHTMALLKGGFVMTWGTGYFGQLGHGDNASYRHPRLLRRLEPQRLG-EKVVQVACGGYHSAVATDAGHVFTWGFNRYGQCGNGSKDNTVPEPSLADLSAVIPPAGAGEVPKVLCGRHHSALVTSRGALYTWGACTFGKLGLHNPEKTVCKPQEVPYFSDKPLLQAAAGDFHMVALSRKREVYSWGYGAEGQGGHGSLLHMRTPRRVTSLQEVPVAQVACGPWWSMAVTVDGFCYAWGSADGGWTGLDRPAGLSVVDPGPSGERAVETQSFDSTHNVHVPALVYSLAPYKVVNVGCGGGHTLVVAER 1621
D+GSG+ + + + S+ P+ +AL+ ++ + D A GA ++ LTS G ++WG +G Y P+ V +PL C+ +SCGRKH +AL++GGFV +WG GYFGQLG GDN S PRL+ L+P RLG ++VV VACGG HSAV T VF +GFNRYGQ G G N + P ++S + G+ ++ +++CGRHH++++T +G +++WGA +FG+LGL +P+K V P EVP F PL A GDFH++ L Y+WGYG+EGQGG G+ LH+RTPR V L+ +AQ+ACG WWSM VT G Y WG DGGW GL+R + L V+P P + T SFDS N +PA+V +L+ +V V GGGHT+++A R
Sbjct: 40 DDGSGAIIQGQNIHFSSQEKKSVLHLPQPLALERYVAEEDGLVQDIACGATFTIALTSRGVPYQWGTVNGRAYPEPSRVSLGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGI----GSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEAGRLYTWGYGDGGWLGLERASKLPYVEPCPPVTKYGATCSFDSDFNACLPAVVSTLSHLRVEKVVAGGGHTIIMARR 435
BLAST of mRNA_P-fluviatile_contig11.1228.1 vs. uniprot
Match: A0A4D9DAH8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAH8_9STRA) HSP 1 Score: 324 bits (831), Expect = 1.380e-95 Identity = 162/354 (45.76%), Postives = 220/354 (62.15%), Query Frame = 2
Query: 608 LFRWGVEDGEVYRFPTGVCTQIPLPCVGISCGRKHTMALLKGGFVMTWGTGYFGQLGHGDNASYRHPRLLRRLEPQRLG-EKVVQVACGGYHSAVATDAGHVFTWGFNRYGQCGNGSKDNTVPEPSLADLSAVIPPAGAGEVPKVLCGRHHSALVTSRGALYTWGACTFGKLGLHNPEKTVCKPQEVPYFSDKPLLQAAAGDFHMVALSRKREVYSWGYGAEGQGGHGSLLHMRTPRRVTSLQEVPVAQVACGPWWSMAVTVDGFC---------------YAWGSADGGWTGLDRPAGLSVVDPGPSGERAVETQSFDSTHNVHVPALVYSLAPYKVVNVGCGGGHTLVVAER 1621
F+ G Y P+ V +PL C+ +SCGRKH +AL++GG+V +WG GYFGQLG GDN S PRL+ L+P RLG ++VV VACGG HSAV T VF +GFNRYGQ G G N + P ++S + G+ ++ +++CGRHH++++T +G +++WGA +FG+LGL +P+K V P EVP F PL A GDFH++ L Y+WGYG+EGQGG G+ LH+RTPR V L+ +AQ+ACG WWSM VT G Y WG DGGW GL+R + L V+P P + T SFDS N +PA+V +L+ +V V GGGHT+++A R
Sbjct: 17 FFQLGPLVRRAYPEPSRVSLGVPLRCLQVSCGRKHALALMEGGYVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPVNMSGI----GSSQIRQLVCGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEAGCVGGKGRGGWRGVLVRLYTWGYGDGGWLGLERASKLPYVEPCPPVTKYGATCSFDSDFNACLPAVVSTLSHLRVEKVVAGGGHTIILARR 366
BLAST of mRNA_P-fluviatile_contig11.1228.1 vs. uniprot
Match: A0A835Z434_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z434_9STRA) HSP 1 Score: 313 bits (802), Expect = 1.660e-93 Identity = 171/334 (51.20%), Postives = 209/334 (62.57%), Query Frame = 2
Query: 671 IPLPCVGISCGRKHTMALLKGGFVMTWGTGYFGQLGHGDNASYRHPRLLRRLEPQRLGEKVVQVACGGYHSAVATDAGHVFTWGFNRYGQCGNGS-KDNTVPEP---SLADLSAVIPPAGAGEVPKVLCGRHHSALVTSRGALYTWGACTFGKLGLHNPEKTVCKPQEVPYFSDKPL--LQAAAGDFHMVALSRKREVYSWGYGAEGQGGHGSLLHMRTPRRVTSLQEVPVAQVACGPWWSMAVTVDGFCYAWGSADGGWTGLDRPAG-LSVVDPGP-------SGERAVETQSFDSTHNVHVPALVYSLAPYKVVNVGCGGGHTLVVAERRAS 1630
+PL V I+CGR+H++AL++GGFVMTWG GYFGQLGHGDNAS +PRLL +LEPQ++ V VA GGYHS T AG F WGFNRYGQCG G D V EP +L +L A G G V CGRHH V + G +Y WGA FG+LG+ +P K P EV + + ++ A G++H +A + + VYSWGYG +GQ GHG H+RTPR V L+ PV QVACG WSMAVT G YAWG ADGGWTGL P G L V+PGP +G A ++FDS H V +P V SL V V CGGGHTLV+A +R +
Sbjct: 3 VPLAAVQIACGRRHSVALMEGGFVMTWGIGYFGQLGHGDNASCTNPRLLHQLEPQQI----VSVAAGGYHSVAVTRAGRGFAWGFNRYGQCGVGDCADAVVSEPRAVALRELRA----RGEG-VRAAACGRHHCVAVGTGGGVYAWGAGGFGRLGVADPPKVAPYPVEVGALRGQRVAEVRVACGEYHNLARTERGAVYSWGYGLDGQCGHGGAQHLRTPRIVERLKGNPVVQVACGSLWSMAVTSTGHLYAWGCADGGWTGLQCPPGVLRCVEPGPVAALDSEAGAAASSARTFDSDHIVLLPERVASLPGVAVEAVACGGGHTLVLARQRGA 327
BLAST of mRNA_P-fluviatile_contig11.1228.1 vs. uniprot
Match: A0A7S3GVQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVQ9_9STRA) HSP 1 Score: 218 bits (555), Expect = 4.190e-61 Identity = 105/217 (48.39%), Postives = 146/217 (67.28%), Query Frame = 2
Query: 749 WGTGYFGQLGHGDNASYRHPRLLRRLEPQRLGEKVVQVACGGYHSAVATDAGHVFTWGFNRYGQCGNG----SKDNTVPEPSLADLSAVIPPAGAGEVPKVLCGRHHSALVTSRGALYTWGACTFGKLGLHNPEKTVCKPQEVPYFSDKPLLQAAAGDFHMVALSRKREVYSWGYGAEGQGGHGSLLHMRTPRRVTSLQEVPVAQVACGPWWSMAVT 1387
WGTGYFGQLGHGD++S+ PR++ LEP+RLG KV+ VACGG HS V TD+G VF WG NR GQCG G K ++V EP D S + G V ++ GR+HSA++++ G ++TWG FG+LGL++ +KT P EV FS P++ +AGDFHM+AL++ +VYSWGYG +GQ GH +L++R PRR+ + + V CG +S+ +T
Sbjct: 1 WGTGYFGQLGHGDDSSWDSPRMISVLEPKRLGAKVINVACGGSHSGVITDSGRVFMWGLNRSGQCGQGLSAKGKSDSVLEPRPVDFSHLANHGTLG-VKSLVLGRNHSAMLSTTGRVFTWGEAGFGRLGLNDVKKTQLIPAEVMAFSKNPVVTLSAGDFHMLALTQDGQVYSWGYGVDGQTGHCVMLNVRCPRRIDFFDTMHIRDVCCGAGYSLVLT 216
BLAST of mRNA_P-fluviatile_contig11.1228.1 vs. uniprot
Match: B7G795_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G795_PHATC) HSP 1 Score: 179 bits (454), Expect = 5.970e-46 Identity = 107/303 (35.31%), Postives = 156/303 (51.49%), Query Frame = 2
Query: 563 AAGANHSVMLTSEGKLFRWGV-EDGE----------VYRFPTGVCTQIPLPCVGISCGRKHTMALLKGGFVMTWGTGYFGQLGHGDNASYRHPRLLRRLEPQRLGEKVVQVACGGYHSAVATDAGHVFTWGFNRYGQCGNGSKDNTVPEPSLADLSAVIPPAGAGEVPKVLCGRHHSALVTSRGALYTWGACTFGKLGLHNPEKTVCKPQEVPYFSDKPLLQAAAGDFHMVALSRKREVYSWGYGAEGQGGHGSLLHMRTPRRVTSLQEVPVAQVACGPWWSMAVTVDGFCYAWGSADGGWTG 1438
A G+ H+V+LT++G++F WG +DG V R + QI L ++CG HT A+ G + TWG G +G+LGHGD A + P+ + L +G V Q+ACG H+A+ T +G ++TWG G G+G + P L + A A V ++ H+A+VT G L+TWG FG+LG H E+ P V Y K Q + G FH +S +Y++G G GQ GH ++ TP V +L + V+Q+ CG S+A+TV G Y WG+ D G G
Sbjct: 39 ACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQ---VTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHATPKRVEAL----VGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESMA------AKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLG-HMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLG 327
BLAST of mRNA_P-fluviatile_contig11.1228.1 vs. uniprot
Match: D8LGK6_ECTSI (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK6_ECTSI) HSP 1 Score: 170 bits (431), Expect = 2.900e-41 Identity = 105/318 (33.02%), Postives = 149/318 (46.86%), Query Frame = 2
Query: 686 VGISCGRKHTMALLKGGFVMTWGTGYFGQLGHGDNASYRHPRLLRRLEPQRLGEKVVQVACGGYHSAVATDAGHVFTWGFNRYGQCGNGSKDNTVPEPSLADLSAVIPPAGAGEVPKVLCGRHHSALVTSRGALYTWGACTFGKLGLHNPEKTVCKPQEVPYFSDKPLLQAAAGDFHMVALSRKREVYSWGYGAEGQGGHGSLLHMRTPRRVTSLQEVPVAQVACGPWWSMAVTVDGFCYAWGSADGGWTGLDRPAGLSVVDPGPSGERAVETQSFDSTHNVHVPALVYSLAPYKVVNVGCGGGHTLVVAERRASPPS 1639
V ++CG HT+ L + G V TWG G G+LGHGDN PR++ LE G+++VQ CG YH+A TD G ++TWG YG+ G+G++ P P + + GA V ++ CG H+ ++T G +YTWG G +G N + P+ + K + Q AA FH AL+ E+++WG G G+ GHG + PR V +L V VACG + S A+ G Y WG + + G V VP LV L VV V HT +A +S P+
Sbjct: 43 VQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALE----GQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGH-PTPCMVKH---LRDEGA-RVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHXXXXXXXXXXXXKLGHG-------------DVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAGASSSTPA 338
BLAST of mRNA_P-fluviatile_contig11.1228.1 vs. uniprot
Match: A0A7S2R4V3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R4V3_9STRA) HSP 1 Score: 162 bits (411), Expect = 7.030e-41 Identity = 101/295 (34.24%), Postives = 147/295 (49.83%), Query Frame = 2
Query: 578 HSVMLTSEGKLFRWGV-EDGEVYRFPTG--VCTQIPLPCVG-----ISCGRKHTMALLKGGFVMTWGTGYFGQLGHGDNASYRHPRLLRRLEPQRLGEKVVQVACGGYHSAVATDAGHVFTWGFNRYGQCGNGSKDNTVPEPSLADLSAVIPPAGAGEVPKVLCGRHHSALVTSRGALYTWGACTFGKLGLHNPEKTVCKPQEVPYFSDKPLLQAAAGDFHMVALSRKREVYSWGYGAEGQGGHGSLLHMRTPRRVTSLQEVPVAQVACGPWWSMAVTVDGFCYAWGSADGGWTG 1438
H+V+LT+ G+++ WG +DG + G +I L G ++CG HT A+ G + TWG G +G+LGHG+ + + P+ L L G V Q+ACG H+AV T G ++TWG G G+G + P L + A G + CG H L SR +YTWG FG+LG H E+ P+ V K Q G FH ++ ++Y++G G GQ GHG ++ P V +L +V V+Q+ CG S+A+T G Y WG+ D G G
Sbjct: 1 HTVVLTTNGEVYTWGRGDDGRLGHGDNGWKYVPRIILSLAGQVICQVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPKRLEGL----TGLTVSQIACGSRHTAVITSTGAMYTWGDKENGVAGHGDNEGHQYTPKLLEKLA-----GKRVIQLSACGFHTGCLTDSR-EVYTWGEGKFGRLG-HGAERNCHSPRLVEVLLGKNPKQVTCGGFHTAVITEDGKMYTFGGGEHGQLGHGDKVNKVKPTLVQALDQVFVSQITCGWSHSVALTSSGQVYTWGNGDHGKLG 284
BLAST of mRNA_P-fluviatile_contig11.1228.1 vs. uniprot
Match: A0A6V2KK16_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2KK16_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.110e-40 Identity = 113/360 (31.39%), Postives = 168/360 (46.67%), Query Frame = 2
Query: 563 AAGANHSVMLTSEGKLFRWGV-EDGEVYRFPTG--VCTQIPLPCVG-----ISCGRKHTMALLKGGFVMTWGTGYFGQLGHGDNASYRHPRLLRRLEPQRLGEKVVQVACGGYHSAVATDAGHVFTWGFNRYGQCGNGSKDNTVPEPSLADLSAVIPPAGAGEVPKVLCGRHHSALVTSRGALYTWGACTFGKLGLHNPEKTVCKPQEVPYFSDKPLLQAAAGDFHMVALSRKREVYSWGYGAEGQGGHGSLLHMRTPRRVTSLQEVPVAQVACGPWWSMAVTVDGFCYAWGSADGGWTGLDRPAGLSVVDPGPSGERAVETQSFDSTHNVHVPALVYSLAPYKVVNVGCGGGHTLVVAE 1618
A G+ H+V+LT++G+++ WG +DG + G +I G ++CG HT A+ G + TWG G +G+LGHG+ + + PR + L +G V Q+ACG H+AV T G ++TWG G G+G + P L + A G V CG H+ +T ++TWG FG+LG H E+ P+ V K Q A G FH ++ ++Y++G G GQ GHG ++ P V +L+ + V+Q+ CG S+A+T G Y WG+ D G G S V P +V LA +KVV V HT + E
Sbjct: 124 ACGSGHTVVLTTDGEVYTWGRGDDGRLGHGDNGWKYVPRIAQSLAGQVIVQVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEGL----VGLTVSQIACGSRHTAVITSTGALYTWGDKENGVAGHGDTEGHQYTPKLLERLA-----GKRVVQLSACG-FHTGCLTDAAEVFTWGEGKFGRLG-HGAERNCHSPRLVEVLLGKKPRQVACGGFHTAVITDDGKMYTFGGGEHGQLGHGDKVNKTKPTIVQALEGIFVSQITCGWSHSVALTAKGRVYTWGNGDHGKLG------------------------HGSGKKVSTPQMVEKLADHKVVRVASYNEHTAALVE 448 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1228.1 >prot_P-fluviatile_contig11.1228.1 ID=prot_P-fluviatile_contig11.1228.1|Name=mRNA_P-fluviatile_contig11.1228.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=983bp MPPRKLTGGRRDNRLLLAFGVGFSYQLGLEEPPASSKTGGKEDGFAPRMRback to top mRNA from alignment at P-fluviatile_contig11:2711030..2726431- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1228.1 ID=mRNA_P-fluviatile_contig11.1228.1|Name=mRNA_P-fluviatile_contig11.1228.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=15402bp|location=Sequence derived from alignment at P-fluviatile_contig11:2711030..2726431- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:2711030..2726431- >mRNA_P-fluviatile_contig11.1228.1 ID=mRNA_P-fluviatile_contig11.1228.1|Name=mRNA_P-fluviatile_contig11.1228.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5898bp|location=Sequence derived from alignment at P-fluviatile_contig11:2711030..2726431- (Porterinema fluviatile SAG_2381)back to top |