mRNA_P-fluviatile_contig11.1189.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1189.1 vs. uniprot
Match: D8LKM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM2_ECTSI) HSP 1 Score: 1404 bits (3633), Expect = 0.000e+0 Identity = 849/1183 (71.77%), Postives = 894/1183 (75.57%), Query Frame = 1
Query: 637 MTSGVPLVCLSMYLGTQSLSCLVYEGVTDCTLKNSGTRHLNYSLGNLYVMWMLFRHLTGSNAKQVMLFRLRHHQSYAVVFSFLSTMYSLYEYAALGIPYRNHTSELMADLIIFLCWFLSIVTIINAAPREHTPAITHLSTVIPDTTLQIESLEVAPDGAFNENDRKRLSLGPLSRDPGPLGRMLRETGRPLNSSYRG-APEVGSPRGAGSLMHQGHGLERTGSLHGSTGXXXXXXXALSRHVXXXXXXXXLSSSIPGAARDDTSTGPAGDQSNMRLGFNSERRPTAA----SLFRSGPDRFHSSTGPHGSDGALNTYEDVAADETGAAAA--AAAADG--------ESGYS-PADPNEYTHPLLKYYRMHGRVPPLSFCITYLCEIVFFWRAMLFTFTVGYKLFLSLAAYYIMNRHWAQIFTPLSTSALVVSWLLTLGCDPRDRVSNQMMNVHFWFHALSEIPDILVWIKNGQNLEAIFNILILVIVWPWVYIAYRRVLTNLRAKYGGQEEDASVKLFWESSFLMAVEFYLAFQANGCLAHAPVGQESICDNIIHSNLISGLNIILIFLVVRVILFKMGDLTITRTLHLELRPYEIIVVIFSVVSGLVSLYFLANREDGVTTIGEIRQGLEWITMFLWIVVCLLMAHLTPTLGGVRAKALEAMVSQSGARAGGSEAA--PNMQPTVNPPGLDEAANNLTLAMAAERRKGSRAGLGTSPSKGS------RKAGTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEMMRVSTPTRVGGADGGDDEWVAEAEXXXXXXXXXXXXXXXXACWDSFAFWLDQRNTRNNLPVFRLLYFSSTVVYFVVMLGVAAGGIKRGYATSIVGVSFASVCSHWLISIEHPTSTMEAVHLLLHACTEAISVLLWVSVRDWTQAVYTLSAFFAVYPCLLYGIQALKLGLHRKFSDHLALVKEAMKIFLRSSVLLMVLMYLAFECIGCLNSRPEADCAALLYANTQVGLSVVLGFLAFLGLIVMQDITPRHFLALSFTWPQQVAVITFSLVAVGLCIFSLASRHFSKLTTDIWEHMVELATLFSWYSALLILWIRRPWYDTAWGENDSMSLNEADEDGEGVVNDGDGEEEWD----GDMAQENGG--AASRKQGGGAPPEWAQVPTQETVGKTADLV 4095
M+SGVPLVCLS+YLGTQSLSCLVYEGVTDC LKNSGTRHLNYSLGNLYVMWMLFRHLTGSNAKQVMLFRLR+HQSYAVVFSFLSTMYSLYEYAA GIPYRN SELMADLIIFL WFLSIVTIINAAPREHTPAI +LSTVIPDTTLQIESLEVAPDGAF ENDRKRLSLGPLSRD GPLGRMLRETGRPLN+SYRG E+GS + H G+ LERTGSLHGST XXXXXX + SS P +A DD T A +QS RLGFNS+RR TAA SLF+ R ST S GALN YEDVA E A A AAAA+G ESG ADPNEYTHPLLKYYRMHGR+PPLSF TYLCEIVFFWR MLFTFTVGYKLFLSLAAYYIMNRHWAQIFTPLSTSALVVSWLLTLGCDPRDRVSNQMMNVHFWFHALSEIPDILVWIK G+ LE ED SVKLFWE SFLMAVEFYLAFQ I+VVIFSVVSG VSLYF+ANREDGVT +GE+RQGLEW TMFLWIVVCLLMAHLTPT+G RAKALEAMV Q+G GG+++A PNM PT N PGLDEAANNL LAMAAERRKGSRAGL +SPSKGS RK TP XXXXXXXXXXXXXXXXXXXXXXXX AEMMRVSTPTR XXXXXXXXXXXXXXXXACWDSFAFW+DQRNT+NNLPVFRLLYFSSTVVYF+VMLGVAAGGIKRGYAT++VGVSFA VCSHWLISIEHPTSTME VHLLLHACTEAISVLLWVSVRDWTQAVYTLSAFFAVYPCL YGIQALKLGLHRKFSDHL LV+EAMKIF+RSSVLLMVLMYLAFECIGCLNSRPEADCAALLYANTQVGLSVVLGFL+FLGLIVMQDIT RHFL+LSFTWPQ VAV+TFSLVAVGLCIFSLASRHFSKLTTD+WEHMVELATLFSWY+ALLILWIRRPWYDTAWGENDSMSLNEADE+ G+ D D EE W+ GD E+ AA ++QG PEWA+VPT ADLV
Sbjct: 1 MSSGVPLVCLSLYLGTQSLSCLVYEGVTDCALKNSGTRHLNYSLGNLYVMWMLFRHLTGSNAKQVMLFRLRNHQSYAVVFSFLSTMYSLYEYAAKGIPYRNPASELMADLIIFLFWFLSIVTIINAAPREHTPAIMYLSTVIPDTTLQIESLEVAPDGAFTENDRKRLSLGPLSRDQGPLGRMLRETGRPLNASYRGYTQEMGSQHDSAIFSHLGNTLERTGSLHGSTTGXXXXXXXXXXXX--------IGSSTPRSALDDNMT--AAEQSTKRLGFNSDRRNTAAGGAASLFKMSEGRQRHST----SAGALNPYEDVADGEGDAPMADEAAAAEGXXXXXXXXESGEGGAADPNEYTHPLLKYYRMHGRIPPLSFFNTYLCEIVFFWRFMLFTFTVGYKLFLSLAAYYIMNRHWAQIFTPLSTSALVVSWLLTLGCDPRDRVSNQMMNVHFWFHALSEIPDILVWIKTGETLE----------------------------------EDTSVKLFWEGSFLMAVEFYLAFQ-------------------------------------------------------------ILVVIFSVVSGSVSLYFMANREDGVTEVGEVRQGLEWTTMFLWIVVCLLMAHLTPTVGSGRAKALEAMVIQNG---GGTDSAATPNMPPTANAPGLDEAANNLALAMAAERRKGSRAGLTSSPSKGSPPRLSGRKPSTP---------NGGRXXXXXXXXXXXXXXXXXXXXXXXXETNGSTALAGNEGAEMMRVSTPTR--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACWDSFAFWMDQRNTQNNLPVFRLLYFSSTVVYFIVMLGVAAGGIKRGYATAVVGVSFACVCSHWLISIEHPTSTMEIVHLLLHACTEAISVLLWVSVRDWTQAVYTLSAFFAVYPCLFYGIQALKLGLHRKFSDHLGLVREAMKIFVRSSVLLMVLMYLAFECIGCLNSRPEADCAALLYANTQVGLSVVLGFLSFLGLIVMQDITSRHFLSLSFTWPQ-VAVLTFSLVAVGLCIFSLASRHFSKLTTDLWEHMVELATLFSWYAALLILWIRRPWYDTAWGENDSMSLNEADEEEAGIGEDDDDEEVWEAGSAGDEISEDAALSAAEKEQGREETPEWARVPTDAGGNPAADLV 1059
BLAST of mRNA_P-fluviatile_contig11.1189.1 vs. uniprot
Match: A0A6H5K6P5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P5_9PHAE) HSP 1 Score: 1081 bits (2796), Expect = 0.000e+0 Identity = 619/852 (72.65%), Postives = 655/852 (76.88%), Query Frame = 1
Query: 1642 SPADPNEYTHPLLKYYRMHGRVPPLSFCITYLCEIVFFWRAMLFTFTVGYKLFLSLAAYYIMNRHWAQIFTPLSTSALVVSWLLTLGCDPRDRVSNQMMNVHFWFHALSEIPDILVWIKNGQNLEA---IFNILILVIVWPWVYIAYRRVLTNLRAKYGGQEEDASVKLFWESSFLMAVEFYLAFQANGCLAHAPVGQESICDNIIHSNLISGLNIILIFLVVRVILFKMGDLTITRTLHLELRPYEIIVVIFSVVSGLVSLYFLANREDGVTTIGEIRQGLEWITMFLWIVVCLLMAHLTPTLGGVRAKALEAMVSQSGARAGGSEAAPNMQPTVNPPGLDEAANNLTLAMAAERRKGSRAGLGTSPSKGS------RKAGTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEMMRVSTPTRVGGADGGD----DEWVAEAEXXXXXXXXXXXXXXXXACWDSFAFWLDQRNTRNNLPVFRLLYFSSTVVYFVVMLGVAAGGIKRGYATSIVGVSFASVCSHWLISIEHPTSTMEAVHLLLHACTEAISVLLWVSVRDWTQAVYTLSAFFAVYPCLLYGIQALKLGLHRKFSDHLALVKEAMKIFLRSSVLLMVLMYLAFECIGCLNSRPEADCAALLYANTQ---------------VGLSVVLGFLAFLGLIVMQDITPRHFLALSFTWPQQVAVITFSLVAVGLCIFSLASRHFSKLTTDIWEHMVELATLFSWYSALLILWIRRPWYDTAWGENDSMSLNEADEDGEGVVNDGDGEEEWDG----DMAQENGG--AASRKQGGGAPPEWAQVPTQETVGKTADLV 4095
SP EYTHPLLKYYRMHGR+PPLSF ITYLCEIVFFWR MLFTFTVGYKLFLSLAAYYIMNRHWAQIFTPLSTSALVVSWLLTLGCDPRDRVSNQMMNVHFWFHALSEIPDILVWIKNG+ L+A +FN+L+LVIVWPWVYIAYRRVLTNLRAKY G EED SVKLFWE SFLMAVEFYLAFQANGCL HAPVG+E+ICDNIIHSNLISG+NIILIFLVVRVILFKMGDLTITRTLHLELRPYEI+VVIFSVVSG VSLYF+ANREDGVT +GE+RQGLEW TMFLWIVVCLLMAHLTPT+G RAKALE MVSQ+G GGS A PNM T N PGLDEAANNL LAMAAERRKGSRAGL SPSKGS RK+ TP XXXXXXXXXXXXXXXXXX AEMMRVSTPTR G ++WVA +D + ++ RGYAT++VGVSFA VCSHWLISIEHPTSTME VHLLLHACTEAISVLLWVSVRDWTQAVYTLSAFFAVYPCL YGIQALKLGLHRKFSDHL LV+EAMKIFL SSVLLMVLMYLAFECIGCLNSRPEADCAALLYANTQ VGLSVVLGFL+FLGLIVMQDIT RHFL+LSFTWPQ VAV+TFSLVAVGLCIFSLASRHFSKLTTD+WEHMVELATLFSWY+ALLILWIRRPWYDTAWGENDSMSLNEADE+ G+ D D EE WD D E+ AA ++QG PEWA+VPT AD V
Sbjct: 21 SPPLNQEYTHPLLKYYRMHGRIPPLSFFITYLCEIVFFWRFMLFTFTVGYKLFLSLAAYYIMNRHWAQIFTPLSTSALVVSWLLTLGCDPRDRVSNQMMNVHFWFHALSEIPDILVWIKNGETLQAKHVVFNVLVLVIVWPWVYIAYRRVLTNLRAKYCGHEEDTSVKLFWEGSFLMAVEFYLAFQANGCLTHAPVGEEAICDNIIHSNLISGMNIILIFLVVRVILFKMGDLTITRTLHLELRPYEILVVIFSVVSGSVSLYFMANREDGVTEVGEVRQGLEWATMFLWIVVCLLMAHLTPTVGSGRAKALEVMVSQNGG-GGGSAATPNMPSTANAPGLDEAANNLALAMAAERRKGSRAGLTNSPSKGSPPRLSGRKSSTP---------NGGPRQXXXXXXXXXXXXXXXXXXTAATETNGSTPLAGNEGAEMMRVSTPTREGXXXXXXXXXXEDWVA----------------------------VDGEDGDDDKE-----------------------DDSRGYATAVVGVSFACVCSHWLISIEHPTSTMEIVHLLLHACTEAISVLLWVSVRDWTQAVYTLSAFFAVYPCLFYGIQALKLGLHRKFSDHLGLVREAMKIFLWSSVLLMVLMYLAFECIGCLNSRPEADCAALLYANTQDRYYVVIERSFTFLQVGLSVVLGFLSFLGLIVMQDITSRHFLSLSFTWPQ-VAVLTFSLVAVGLCIFSLASRHFSKLTTDLWEHMVELATLFSWYAALLILWIRRPWYDTAWGENDSMSLNEADEEEAGIGGDDD-EEVWDAGSTRDEISEDAALSAAEKEQGREETPEWARVPTDAGGKPAADFV 809
BLAST of mRNA_P-fluviatile_contig11.1189.1 vs. uniprot
Match: D8LKM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM3_ECTSI) HSP 1 Score: 262 bits (670), Expect = 1.400e-76 Identity = 136/161 (84.47%), Postives = 141/161 (87.58%), Query Frame = 1
Query: 13 GNLGGVVVKVGVPQIRRDSRLLTKPETAGSGYGGRGAYGVPGGGPGGRRWSESSNHSSMTYSRRISAVGTIFESPHISVGMQQLVLVAPAFLYAIAVVMWLSQDEDIEFARELAPVSFAALCVHLFAAGEIPYLTVWEVVHYWFHAACEVLVANDYTRKIG 495
G LGGVVVK+G RRDSRLLTK E +GS YG YG GGG GG RW ESSNHSSMTYSRRISAVGTIFESPHISVG Q +VLVAPAFLYA+AVVMWLSQDEDIEFARELAPVSFA+LCVHLFAAGEIPYLT WEVVHYWFHAACEVLVANDYTRKIG
Sbjct: 29 GTLGGVVVKIGQAHTRRDSRLLTKREGSGSAYGASRGYGNAGGGAGGTRWLESSNHSSMTYSRRISAVGTIFESPHISVGTQ-IVLVAPAFLYAMAVVMWLSQDEDIEFARELAPVSFASLCVHLFAAGEIPYLTFWEVVHYWFHAACEVLVANDYTRKIG 188 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1189.1 >prot_P-fluviatile_contig11.1189.1 ID=prot_P-fluviatile_contig11.1189.1|Name=mRNA_P-fluviatile_contig11.1189.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1304bp MTYSRRISAVGTIFESPHISVGMQQLVLVAPAFLYAIAVVMWLSQDEDIEback to top mRNA from alignment at P-fluviatile_contig11:2367233..2395629+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1189.1 ID=mRNA_P-fluviatile_contig11.1189.1|Name=mRNA_P-fluviatile_contig11.1189.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=28397bp|location=Sequence derived from alignment at P-fluviatile_contig11:2367233..2395629+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:2367233..2395629+ >mRNA_P-fluviatile_contig11.1189.1 ID=mRNA_P-fluviatile_contig11.1189.1|Name=mRNA_P-fluviatile_contig11.1189.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7824bp|location=Sequence derived from alignment at P-fluviatile_contig11:2367233..2395629+ (Porterinema fluviatile SAG_2381)back to top |