prot_P-fluviatile_contig56.11981.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig56.11981.1
Unique Nameprot_P-fluviatile_contig56.11981.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length281
Homology
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BLAST of mRNA_P-fluviatile_contig56.11981.1 vs. uniprot
Match: D8LC15_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC15_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 3.940e-81
Identity = 159/280 (56.79%), Postives = 190/280 (67.86%), Query Frame = 0 
Query:    5 RTFYLAVGVVA-TAAANMPQGLPTSLYTLQGGASGLETEGDYVENKIARKIHAVFGSAAQTAADEAKYLNSAAKDAAHKAANQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHIPREQNM---MPKLSWVGGGKTVPAADERNAVTKFMGNPNNVFIAQGVVALLFGGLHLVKYDSFAGKLAGPLRKLLGPDWAAGLVGPHIKLVGAYSVGVLVSDVLAYKSNSAGFKRGKIWHEMGTNIAIAAVCLTELFLNDSTDMLPHAIAALLFTGWYSYLAQQY 280
            R   L  G+ A T A ++P+   + +Y+LQGG SGLET+GDY+ENKIAR    V+GS   T          AA +A  K AN+ XXXXXXXXXXXXXXX                P E+      PK+SWVGG K V  ADER A+ KF+GNPNN F+AQGV ALLFGGLHL KYD F GKLA PL  L G +W  G VGP++KL+GAY VGV  SDVLAYKSNSAGFKRGKIWHEMG+ IAI+ +C+T++F     D++PHAIAA +F GWYSYL+QQY
Sbjct:    5 RVACLVAGLAASTTAVHVPE---SPVYSLQGGGSGLETKGDYLENKIAR---GVYGSIDTTTKGVVGVFGLAADEA--KQANKAXXXXXXXXXXXXXXXVKHVRESVHIPTKIGWPFEEKAPEPQPKMSWVGGAKQV-VADERTALKKFIGNPNNAFVAQGVTALLFGGLHLAKYDQFVGKLAQPLCSLFGLEWGPGTVGPYMKLIGAYLVGVFFSDVLAYKSNSAGFKRGKIWHEMGSCIAISTLCITQMFSETPADVVPHAIAAFVFAGWYSYLSQQY 275
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig56.11981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC15_ECTSI3.940e-8156.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 254..258
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..276
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..221
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 277..280
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 175..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 233..253
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 222..232
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.666

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig56contigP-fluviatile_contig56:270498..274865 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig56.11981.1mRNA_P-fluviatile_contig56.11981.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig56 270485..276206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig56.11981.1 ID=prot_P-fluviatile_contig56.11981.1|Name=mRNA_P-fluviatile_contig56.11981.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=281bp
MVLFRTFYLAVGVVATAAANMPQGLPTSLYTLQGGASGLETEGDYVENKI
ARKIHAVFGSAAQTAADEAKYLNSAAKDAAHKAANQARGSAQNVRDAARS
TAKSAGDAAKSARESAHIPREQNMMPKLSWVGGGKTVPAADERNAVTKFM
GNPNNVFIAQGVVALLFGGLHLVKYDSFAGKLAGPLRKLLGPDWAAGLVG
PHIKLVGAYSVGVLVSDVLAYKSNSAGFKRGKIWHEMGTNIAIAAVCLTE
LFLNDSTDMLPHAIAALLFTGWYSYLAQQY*
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