prot_P-fluviatile_contig55.11934.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig55.11934.1
Unique Nameprot_P-fluviatile_contig55.11934.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length107
Homology
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BLAST of mRNA_P-fluviatile_contig55.11934.1 vs. uniprot
Match: A0A6H5L3E5_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E5_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 9.240e-42
Identity = 76/88 (86.36%), Postives = 80/88 (90.91%), Query Frame = 0 
Query:   13 YEEAMTFPWRSEMHIQMAFMEEPEEPPRIYEGTLVGVKPKDPRTDMMPWECLLVEWDDEPGTSTVNPWEVEEVSAATAAARRRGAAPG 100
            Y+EAMTF WRSEMHIQMAFMEEP EPPRI+EGTLVGVKPKDPRT MMPWECL+VEWDDE G +TVNPWEVE VSAATAAARRR  APG
Sbjct:  666 YDEAMTFNWRSEMHIQMAFMEEPGEPPRIFEGTLVGVKPKDPRTQMMPWECLIVEWDDEAGMNTVNPWEVEAVSAATAAARRR--APG 751
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BLAST of mRNA_P-fluviatile_contig55.11934.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 1.370e-41
Identity = 76/88 (86.36%), Postives = 80/88 (90.91%), Query Frame = 0 
Query:   13 YEEAMTFPWRSEMHIQMAFMEEPEEPPRIYEGTLVGVKPKDPRTDMMPWECLLVEWDDEPGTSTVNPWEVEEVSAATAAARRRGAAPG 100
            Y+EAMTF WRSEMHIQMAFMEEP EPPRI+EGTLVGVKPKDPRT MMPWECL+VEWDDE G +TVNPWEVE VSAATAAARRR  APG
Sbjct: 2079 YDEAMTFNWRSEMHIQMAFMEEPGEPPRIFEGTLVGVKPKDPRTQMMPWECLMVEWDDEAGMNTVNPWEVEAVSAATAAARRR--APG 2164
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig55.11934.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3E5_9PHAE9.240e-4286.36Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G6R7_ECTSI1.370e-4186.36Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.1040coord: 21..92
e-value: 6.7E-9
score: 37.0
NoneNo IPR availablePANTHERPTHR31384FAMILY NOT NAMEDcoord: 12..90
IPR010525Auxin response factorPFAMPF06507Auxin_respcoord: 13..64
e-value: 1.4E-4
score: 22.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig55contigP-fluviatile_contig55:697628..699130 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig55.11934.1mRNA_P-fluviatile_contig55.11934.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig55 697389..726870 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig55.11934.1 ID=prot_P-fluviatile_contig55.11934.1|Name=mRNA_P-fluviatile_contig55.11934.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=107bp
MRCRSIWWRRLGYEEAMTFPWRSEMHIQMAFMEEPEEPPRIYEGTLVGVK
PKDPRTDMMPWECLLVEWDDEPGTSTVNPWEVEEVSAATAAARRRGAAPG
TSTLDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010525Auxin_resp