prot_P-fluviatile_contig55.11877.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig55.11877.1
Unique Nameprot_P-fluviatile_contig55.11877.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length198
Homology
BLAST of mRNA_P-fluviatile_contig55.11877.1 vs. uniprot
Match: A0A6H5JGN7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGN7_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 4.930e-46
Identity = 85/189 (44.97%), Postives = 121/189 (64.02%), Query Frame = 0
Query:    1 PTLVYPDWDAVADGTRPFRLCTDACSDGFGASKKQEQSDGSVPPIVFVSRATLPSERNWTVRDLQAGCIVWAIGCLQGFLYITRFLIYTDHQA-----RTAQHKGSKLSGIPVQVHLHPYLPQWHR---QRQSIFPLSLPLPAEDAGRSGPASLEEMDASGVVFVQTRDTVYGHTFAPGTGLGGLRLPH 181
            P LV+PDW A+ D +RP RLC+DAC DGFGAS +QEQ DGSV PIV++SRATLP+ERNWTV DL+AG IVWAI  L+G+L+ T+F+IY+DH+A     +  +H       +    +   Y  ++ +      + F   LPLPA+D  ++GP  ++ +D +GV  ++     +  +  P  GLGGLR P+
Sbjct:  231 PILVFPDWAAIEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFT-YTLKYRKGSANGNADFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIRACGRNHRSSSTPEVGLGGLRPPY 418          
BLAST of mRNA_P-fluviatile_contig55.11877.1 vs. uniprot
Match: A0A6H5KTG7_9PHAE (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG7_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 1.650e-45
Identity = 86/188 (45.74%), Postives = 117/188 (62.23%), Query Frame = 0
Query:    1 PTLVYPDWDAVADGTRPFRLCTDACSDGFGASKKQEQSDGSVPPIVFVSRATLPSERNWTVRDLQAGCIVWAIGCLQGFLYITRFLIYTDHQA-----RTAQHKGSKLSGIPVQVHLHPYLPQWHR---QRQSIFPLSLPLPAEDAGRSGPASLEEMDASGVVFVQTRDTVYGHTFAPGTGLGGLRLP 180
            P LV+PDW A  D +RP RLC+DAC DGFGAS +QEQ DGSV PIV++SRATLP+ERNWTV DL+AG IVWAI  L+G+L+ T+F+IY+DH+A     +  +H       +    +   Y  ++ +      + F   LPLPA+D  + GP  ++ +D +GV  +      Y  +  P  GLGGLR P
Sbjct:  123 PILVFPDWAATEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVREHNARVQRWLEFLSNFT-YTLKYRKGSANGNADFLSRLPLPAQDTDKIGPDCIDGVDQAGVFLIWACRRNYHSSCTPEVGLGGLRPP 309          
BLAST of mRNA_P-fluviatile_contig55.11877.1 vs. uniprot
Match: A0A6H5KFH4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFH4_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 9.350e-45
Identity = 85/188 (45.21%), Postives = 119/188 (63.30%), Query Frame = 0
Query:    1 PTLVYPDWDAVADGTRPFRLCTDACSDGFGASKKQEQSDGSVPPIVFVSRATLPSERNWTVRDLQAGCIVWAIGCLQGFLYITRFLIYTDHQA-----RTAQHKGSKLSGIPVQVHLHPYLPQWHRQR---QSIFPLSLPLPAEDAGRSGPASLEEMDASGVVFVQTRDTVYGHTFAPGTGLGGLRLP 180
            P LV+PDW A+ D +RP RLC+DAC DGFGAS +QEQ DGSV PIV++SRATLP+ERNWTV DL+AG I WAI  L+G+L+ T F+IY+D++A     +  +H  ++L      +    Y  ++ +      + F   LPLPA+D  ++GP  ++ +D +GV  +      Y  +  P  GLGGLR P
Sbjct:  162 PILVFPDWAAIEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIGWAIKRLRGYLWSTMFIIYSDYKALESIGKVGEH-NARLQRWLEFLSNFTYTLKYRKSSANGNADFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIWACGRNYHSSSTPEVGLGGLRPP 348          
BLAST of mRNA_P-fluviatile_contig55.11877.1 vs. uniprot
Match: A0A6H5JPT7_9PHAE (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT7_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 1.210e-44
Identity = 85/185 (45.95%), Postives = 114/185 (61.62%), Query Frame = 0
Query:    3 LVYPDWDAVADGTRPFRLCTDACSDGFGASKKQEQSDGSVPPIVFVSRATLPSERNWTVRDLQAGCIVWAIGCLQGFLYITRFLIYTDHQA-----RTAQHKGSKLSGIPVQVHLHPYLP--QWHRQRQSIFPLSLPLPAEDAGRSGPASLEEMDASGVVFVQTRDTVYGHTFAPGTGLGGLRLP 180
            LV+ DW AV D +RP RLC++AC DGFGAS +QEQ DGSV PIV++SRATLP+ERNWTV DL+AG IVWAI  L+G+L+ T+F+IY+DH+A     +  +H       +    +    L   Q      + F   LPLPA+D   +GP  ++ +D +GV  +      Y  +  P  GLGGLR P
Sbjct:  123 LVFQDWAAVEDNSRPLRLCSNACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRQGSANGNADFLSRLPLPAQDTDETGPDCIDGVDQAGVFLIWACGRNYHSSSTPEVGLGGLRPP 307          
BLAST of mRNA_P-fluviatile_contig55.11877.1 vs. uniprot
Match: A0A6H5JZB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB2_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 4.040e-44
Identity = 88/187 (47.06%), Postives = 120/187 (64.17%), Query Frame = 0
Query:    1 PTLVYPDWDAVADGTRPFRLCTDACSDGFGASKKQEQSDGSVPPIVFVSRATLPSERNWTVRDLQAGCIVWAIGCLQGFLYITRFLIYTDHQARTAQHK-GSKLSGIPVQVHLHPYLPQWHRQRQ------SIFPLSLPLPAEDAGRSGPASLEEMDASGVVFVQTRDTVYGHTFAPGTGLGGLRLP 180
            P LV+PDW A+ D +RP RLC+DAC DGFGAS +QEQ DGSV PIV++SRATLP+ERNWTV DL+AG IVWAI  L+G+L+ T+F+IY+DH+A  +  K G   + +   + L        + R+      + F   LPLPA+D  ++GP  ++ +D +GV  +      Y  +  P  GLGGLR P
Sbjct:  298 PILVFPDWAAIEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFIIYSDHKALESIGKVGEHNARVQRWLELLSNFTYTLKYRKCSANGNAHFLSRLPLPAQDTDKTGPDCIDGVDQAGVFLIWACMRNYHSSSTPEVGLGGLRPP 484          
BLAST of mRNA_P-fluviatile_contig55.11877.1 vs. uniprot
Match: A0A6H5KHG2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG2_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 5.430e-44
Identity = 86/188 (45.74%), Postives = 119/188 (63.30%), Query Frame = 0
Query:    1 PTLVYPDWDAVADGTRPFRLCTDACSDGFGASKKQEQSDGSVPPIVFVSRATLPSERNWTVRDLQAGCIVWAIGCLQGFLYITRFLIYTDHQA-----RTAQHKGSKLSGIPVQVHLHPYLPQWHR---QRQSIFPLSLPLPAEDAGRSGPASLEEMDASGVVFVQTRDTVYGHTFAPGTGLGGLRLP 180
            P LV+PDW A+ D +RP RLC+DAC DGFGAS +QEQ DGSV PIV++SRATLP+ERNWTV DL+AG IVWAI  L+G+L+ T+F+IY+DH+A     +  +H       +    +   Y  ++ +      + F   LPLPA+D  ++GP  ++ +D +GV  +      Y  +  P  GLGGLR P
Sbjct:  459 PILVFPDWAAIEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWWTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFT-YTLKYRKGSANGNADFLPRLPLPAQDTDKTGPYGIDGVDQAGVFLIWACGRNYHSSSTPEVGLGGLRPP 645          
BLAST of mRNA_P-fluviatile_contig55.11877.1 vs. uniprot
Match: A0A6H5KKW5_9PHAE (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW5_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 7.520e-43
Identity = 84/188 (44.68%), Postives = 118/188 (62.77%), Query Frame = 0
Query:    1 PTLVYPDWDAVADGTRPFRLCTDACSDGFGASKKQEQSDGSVPPIVFVSRATLPSERNWTVRDLQAGCIVWAIGCLQGFLYITRFLIYTDHQA-----RTAQHKGSKLSGIPVQVHLHPYLPQWHR---QRQSIFPLSLPLPAEDAGRSGPASLEEMDASGVVFVQTRDTVYGHTFAPGTGLGGLRLP 180
            P LV+PDW AV D +RP RLC+DAC DGFGAS +QEQ DGSV PIV++SRATLP+ERN TV DL+AG IVWAI  L+G+L+ T+F+IY+DH+A     +  +H       +    +   Y  ++ +      + F   +PLPA+D  ++G   ++ +D +GVV ++     Y  +  P  GLGGL  P
Sbjct:   16 PILVFPDWAAVKDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNRTVLDLEAGGIVWAIKRLRGYLWSTKFVIYSDHKALESIGKVGEHNARVQRWLEFLSNFT-YTLKYRKGSANGNADFLSRMPLPAQDTDKTGQDCIDGVDHAGVVLIRGCGLHYHSSSTPDVGLGGLTPP 202          
BLAST of mRNA_P-fluviatile_contig55.11877.1 vs. uniprot
Match: A0A6H5L323_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L323_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 2.320e-42
Identity = 84/188 (44.68%), Postives = 118/188 (62.77%), Query Frame = 0
Query:    1 PTLVYPDWDAVADGTRPFRLCTDACSDGFGASKKQEQSDGSVPPIVFVSRATLPSERNWTVRDLQAGCIVWAIGCLQGFLYITRFLIYTDHQA-----RTAQHKGSKLSGIPVQVHLHPYLPQWHR---QRQSIFPLSLPLPAEDAGRSGPASLEEMDASGVVFVQTRDTVYGHTFAPGTGLGGLRLP 180
            P LV+PDW AV D +RP RLC+DAC DGFGAS +QEQ DGSV PIV++SRATLP+ERNWTV DL+AG IVWAI  L+G+L+ T+F+IY+DH+A     +  +H       +    +   Y  ++ +      + F   +PLPA+D  ++G   ++ +D +GV  ++     Y  +  P  GLGGL  P
Sbjct:  993 PILVFPDWAAVEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFVIYSDHKALESIGKVGEHNARVQRWLEFLSNFT-YTLKYRKGSANGNADFLSRMPLPAQDTDKTGQDCIDGVDHAGVFLIRACGLHYHSSSTPDVGLGGLTPP 1179          
BLAST of mRNA_P-fluviatile_contig55.11877.1 vs. uniprot
Match: A0A6H5JK47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK47_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 2.380e-42
Identity = 84/188 (44.68%), Postives = 118/188 (62.77%), Query Frame = 0
Query:    1 PTLVYPDWDAVADGTRPFRLCTDACSDGFGASKKQEQSDGSVPPIVFVSRATLPSERNWTVRDLQAGCIVWAIGCLQGFLYITRFLIYTDHQA-----RTAQHKGSKLSGIPVQVHLHPYLPQWHR---QRQSIFPLSLPLPAEDAGRSGPASLEEMDASGVVFVQTRDTVYGHTFAPGTGLGGLRLP 180
            P LV+PDW AV D +RP RLC+DAC DGFGAS +QEQ DGSV PIV++SRATLP+ERNWTV DL+AG IVWAI  L+G+L+ T+F+IY+DH+A     +  +H       +    +   Y  ++ +      + F   +PLPA+D  ++G   ++ +D +GV  ++     Y  +  P  GLGGL  P
Sbjct: 1040 PILVFPDWAAVEDNSRPLRLCSDACIDGFGASLEQEQLDGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWSTKFVIYSDHKALESIGKVGEHNARVQRWLEFLSNFT-YTLKYRKGSANGNADFLSRMPLPAQDTDKTGQDCIDGVDHAGVFLIRACGLHYHSSSTPDVGLGGLTPP 1226          
BLAST of mRNA_P-fluviatile_contig55.11877.1 vs. uniprot
Match: A0A6H5KPN8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN8_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 3.070e-42
Identity = 85/191 (44.50%), Postives = 117/191 (61.26%), Query Frame = 0
Query:    1 PTLVYPDWDAVADGTRPFRLCTDACSDGFGASKKQEQSDGSVPPIVFVSRATLPSERNWTVRDLQAGCIVWAIGCLQGFLYITRFLIYTDHQA-----RTAQHKGSK------LSGIPVQVHLHPYLPQWHRQRQSIFPLSLPLPAEDAGRSGPASLEEMDASGVVFVQTRDTVYGHTFAPGTGLGGLRLP 180
            P LV+PDW A+ D +RPFRLC+DAC DGFGAS +QEQ +GSV PIV++SRATLP+ERNWTV DL+AG IVWAI  L+G+L++T+F+IY+DH+A     +  +H          LS     +         +    S     LP+PA+D  ++G   ++ +D +GV  +      Y  +  P  GLGGLR P
Sbjct: 1038 PILVFPDWAAIEDNSRPFRLCSDACIDGFGASLEQEQLNGSVRPIVYISRATLPAERNWTVLDLEAGGIVWAIKRLRGYLWLTKFIIYSDHKALESIGKVGEHNARVQRWLEFLSNFTYTLKYRKGSANGNADNIS----RLPVPAQDTDKTGLDCIDGVDQAGVFLIWACGRNYHSSSTPEVGLGGLRPP 1224          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig55.11877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGN7_9PHAE4.930e-4644.97Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KTG7_9PHAE1.650e-4545.74RT_RNaseH domain-containing protein (Fragment) n=1... [more]
A0A6H5KFH4_9PHAE9.350e-4545.21Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JPT7_9PHAE1.210e-4445.95RT_RNaseH domain-containing protein (Fragment) n=1... [more]
A0A6H5JZB2_9PHAE4.040e-4447.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHG2_9PHAE5.430e-4445.74Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KKW5_9PHAE7.520e-4344.68RT_RNaseH domain-containing protein (Fragment) n=1... [more]
A0A6H5L323_9PHAE2.320e-4244.68Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JK47_9PHAE2.380e-4244.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPN8_9PHAE3.070e-4244.50Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 15..96
e-value: 1.7E-16
score: 60.4
NoneNo IPR availableGENE3D3.10.20.370coord: 11..115
e-value: 7.3E-15
score: 57.0
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 10..102
NoneNo IPR availableTMHMMTMhelixcoord: 69..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig55contigP-fluviatile_contig55:109490..110083 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig55.11877.1mRNA_P-fluviatile_contig55.11877.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig55 109490..111322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig55.11877.1 ID=prot_P-fluviatile_contig55.11877.1|Name=mRNA_P-fluviatile_contig55.11877.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=198bp
PTLVYPDWDAVADGTRPFRLCTDACSDGFGASKKQEQSDGSVPPIVFVSR
ATLPSERNWTVRDLQAGCIVWAIGCLQGFLYITRFLIYTDHQARTAQHKG
SKLSGIPVQVHLHPYLPQWHRQRQSIFPLSLPLPAEDAGRSGPASLEEMD
ASGVVFVQTRDTVYGHTFAPGTGLGGLRLPHFFRRVRSSSPQLLRLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041373RT_RNaseH