prot_P-fluviatile_contig5.11183.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig5.11183.1
Unique Nameprot_P-fluviatile_contig5.11183.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length324
Homology
BLAST of mRNA_P-fluviatile_contig5.11183.1 vs. uniprot
Match: D8LPM7_ECTSI (RPA_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM7_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 4.910e-88
Identity = 141/207 (68.12%), Postives = 167/207 (80.68%), Query Frame = 0
Query:   39 KQSLLAVNIKQVLESEMMNQDSGARIDGVDVAQVKLVGCIVEIEDASTNTSYTIEDTTGRLHVKMFHNDDEVGGSERSAEKRARNQVGVYVRIIGNIRSWKDDRHAVAYLIEPVEDMNEITYHYLEVIHNHLFNTKGPLPGNSSVGGGAAVAQPMNGVGSPGFHGSSSQQGFTSPAAN--------MHNSSSNQGAADAKGFTKVQQ 237
            +QSLL+VNIKQVLESEM NQDSGA+IDG DV+Q+KLVGCIVE+++ASTNT YT+EDTTGRL VKMFHND E G ++R+AEKRAR QVG YVR+ GN+RSWKDDRH+VAY + P+ DM+E+T H LE I+ HLFNTKGPLPG +S  GGA VAQPMNGVGSPGF+G SSQ GFTSP  N        M+N+S N     +KGFT +QQ
Sbjct:   64 QQSLLSVNIKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGE-GANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPITDMDEVTLHALETIYTHLFNTKGPLPGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGNNXXXXXXXXMYNNS-NMDPEGSKGFTPIQQ 268          
BLAST of mRNA_P-fluviatile_contig5.11183.1 vs. uniprot
Match: A0A835YU42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU42_9STRA)

HSP 1 Score: 159 bits (402), Expect = 4.210e-43
Identity = 89/185 (48.11%), Postives = 123/185 (66.49%), Query Frame = 0
Query:   33 GHGNKEKQSLLAVNIKQVLESEMMNQDSGARIDGVDVAQVKLVGCIVEIEDASTNTSYTIEDTTGRLHVKMFHNDDEVGGSERSAEKRARNQVGVYVRIIGNIRSWKDDRHAVAYLIEPVEDMNEITYHYLEVIHNHLFNTKGPL---PGNSSVG-GGAAVAQPMN--GVGSPGF--HGSSSQQG 209
            G  ++EKQS++ + IKQVLES+  N D   ++DGV++  V+LVGCI++I + STN  + IED TGR+  K+F   DE   S+   E+R+R + GVYV ++G I+ W+D  H  A+ I P+ED N+IT H+LE I+ HL NT GPL   PG ++ G GGAA AQPM     GSPGF   G ++QQG
Sbjct:   28 GRPSREKQSIMPLTIKQVLESQHDNPDDKPKVDGVEIVHVRLVGCIIDINEHSTNAVFKIEDGTGRIDAKVFIEQDE---SQLQTERRSRCREGVYVAVVGQIKRWQDKLHVHAFDIRPLEDTNQITQHFLEAIYAHLHNTLGPLRKAPGGAAGGIGGAAGAQPMAVANYGSPGFARQGGAAQQG 209          
BLAST of mRNA_P-fluviatile_contig5.11183.1 vs. uniprot
Match: A0A7S4D5U0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5U0_HETAK)

HSP 1 Score: 116 bits (290), Expect = 1.760e-27
Identity = 58/149 (38.93%), Postives = 93/149 (62.42%), Query Frame = 0
Query:   37 KEKQSLLAVNIKQVLESEMMNQDSGARIDGVDVAQVKLVGCIVEIEDASTNTSYTIEDTTGRLHVKMFHNDDEVGGSERSAEKRARNQVGVYVRIIGNIRSWKDDRHAVAYLIEPVEDMNEITYHYLEVIHNHLFNTKGPLPGNSSVGG 185
            K+  ++    IKQ++++     D+  R+DG +V QV LVGC++E  + STNTS+ IED TGR+ V M+   D+ G +  + E+RA       VR +GN R ++  R+ +A+ ++P++D NE+T H+LE I+ H   T+GPLP    +GG
Sbjct:   54 KQDHTMKPCTIKQLMDATNDGSDT-FRVDGQEVTQVMLVGCVIEKVERSTNTSWIIEDGTGRMEVMMYQ--DDAGANPVAEERRAACMQNTMVRAVGNFREFQGKRNVLAFDVQPLKDFNEVTRHFLEAIYAHCVATRGPLPMEQPLGG 199          
BLAST of mRNA_P-fluviatile_contig5.11183.1 vs. uniprot
Match: A0A7S3XCT1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XCT1_9CHLO)

HSP 1 Score: 117 bits (294), Expect = 2.740e-27
Identity = 66/166 (39.76%), Postives = 94/166 (56.63%), Query Frame = 0
Query:   31 SGGHGNKEKQSLLAVNIKQVLESEMMNQDSGARIDGVDVAQVKLVGCIVEIEDASTNTSYTIEDTTGRLHVKMFHNDDEVGGSERSAEKRARNQVGVYVRIIGNIRSWKDDRHAVAYLIEPVEDMNEITYHYLEVIHNHLFNTKGPLPGNSSVGGGAAVAQPMNGV 196
            S G   K  QSL+AV +KQ+  +     D   +IDGVDV  V +VG IV   + ST   Y I+D TG++ V+ + + D+   SE     +A  QVG YVR+ G +R+++  R+ VA+ I PV D NE+TYH+LEV++ HL  T G      + G  AA   P +G 
Sbjct:   71 SPGKEKKNTQSLVAVTVKQMFNAASATADDSFQIDGVDVHNVTIVGKIVSATEQSTCLIYKIDDGTGKVEVRFWIDSDD---SELLNRNKAEWQVGTYVRVTGQLRTFQGQRNIVAFQIRPVSDFNEVTYHFLEVVYAHLHRTNG----TKATGAPAAAGMPGSGA 229          
BLAST of mRNA_P-fluviatile_contig5.11183.1 vs. uniprot
Match: A0A1Y1Z7U3_9FUNG (Replication protein A, subunit RPA32 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z7U3_9FUNG)

HSP 1 Score: 114 bits (285), Expect = 3.790e-26
Identity = 54/142 (38.03%), Postives = 91/142 (64.08%), Query Frame = 0
Query:   35 GNKEKQSLLAVNIKQVLESEMMNQDSGARIDGVDVAQVKLVGCIVEIEDASTNTSYTIEDTTGRLHVKMFHNDDEVGGSERSAEKRARNQVGVYVRIIGNIRSWKDDRHAVAYLIEPVEDMNEITYHYLEVIHNHLFNTKGP 176
            G    Q+L  V+IKQ+LE+  ++ D+  ++D  +++Q+  +G I    + STN SY +ED TG + V+ +  +D+   +E   +KRA+   G+YVR++G  + +   RH VA+ + P+ED NEIT+H+LEV++ HLF T+ P
Sbjct:   31 GGAAAQNLTPVSIKQLLEATQIHADAPFKVDEHELSQITFIGIIRRQSEQSTNVSYIVEDGTGSIDVRTWLENDD---NEIQQQKRAQLVEGIYVRVVGQFKQFASKRHVVAFSMRPIEDYNEITHHFLEVVYVHLFRTRNP 169          
BLAST of mRNA_P-fluviatile_contig5.11183.1 vs. uniprot
Match: A0A7S0HR69_9EUKA (Hypothetical protein n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HR69_9EUKA)

HSP 1 Score: 115 bits (287), Expect = 6.270e-26
Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 0
Query:   39 KQSLLAVNIKQVLESEMMNQDSGARIDGVDVAQVKLVGCIVEIEDASTNTSYTIEDTTGRLHVKMFHNDDEVGGSERSAEKRARNQVGVYVRIIGNIRSWKDDRHAVAYLIEPVEDMNEITYHYLEVIHNHLFNTKGPLPGNSSVGGGAAVAQPMNGV 196
            KQSL    IKQ+  +     D+G  +DG D+ QV +VG I   ++ +TN  YT++D T  ++VKM+    +    E + EKRA+ + G  VR+IG +R++   R  VA+ I+P+ D NE T+H++EV+H HL NTKG      +   GA +A    GV
Sbjct:   88 KQSLAPCTIKQLKNAPASGGDNGFSVDGKDLHQVTIVGLITHADEQNTNLQYTVDDGTDSINVKMWI---DAATDEAAMEKRAQWREGAVVRVIGQMRAFNQVRSIVAFHIQPLTDFNEYTFHFIEVVHTHLRNTKGAAAEQGAPAAGAGMAGASMGV 242          
BLAST of mRNA_P-fluviatile_contig5.11183.1 vs. uniprot
Match: A0A5D6XJQ9_9STRA (OB domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJQ9_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.610e-25
Identity = 60/163 (36.81%), Postives = 100/163 (61.35%), Query Frame = 0
Query:   32 GGHGNKEKQSLLAVNIKQVLESEMMNQDSGARIDGVDVAQVKLVGCIVEIEDASTNTSYTIEDTTGRLHVKMF-HNDDEVGGSERSAEKRARNQVGVYVRIIGNIRSWKDDRHAVAYLIEPVEDMNEITYHYLEVIHNHLFNTKGPLPGNSSVGGGAAVAQPM 193
            GG  ++E Q+LL +  KQ L S     D   RIDG +V  VKLVG +  +   STN ++ ++D TG +  ++F H +D     E +  + A+ + G+YVR++GN+R++++     A+ + P+ED NE+T+H+L+ I+ H +NTKGPL G +   GG+ +  P+
Sbjct:   43 GGRPSREAQTLLPITAKQ-LASRSTADDDVIRIDGQEVTNVKLVGILSNVVPHSTNVNFQLDDGTGVVDGRLFLHAED----GEYADSEVAKLRDGIYVRVVGNLRTFQEKVSLSAFAVTPIEDFNEVTHHFLDAIYVHCYNTKGPLGGGA---GGSVLGAPV 197          
BLAST of mRNA_P-fluviatile_contig5.11183.1 vs. uniprot
Match: A0A7S2SSA9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSA9_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.250e-24
Identity = 68/204 (33.33%), Postives = 118/204 (57.84%), Query Frame = 0
Query:   36 NKEKQSLLAVNIKQVLESEMMNQDSGARIDGVDVAQVKLVGCIVEIEDASTNTSYTIEDTTGRLHVKMFHNDDEVGGSERSAEKRARNQVGVYVRIIGNIRSWKDDRHAVAYLIEPVEDMNEITYHYLEVIHNHLFNTKGPLPGNSSVGGGAAVAQPMNGVGSPGFHGSSSQQGFTSPAANMHNSSSNQGAADAKGFTKVQQQA 239
            ++++Q+++   I+Q+  + + + D   +IDGV++AQV+LV  ++++ + ST   Y +ED TG + VKM+++ DE   +E +A +RA  + GVYVRI   ++ +       A  I PVED NEIT H LE I+ HL +T+GP    ++  G  + +   +G G+ GF+          P  N+ ++ + +G +   GFT VQ +A
Sbjct:   51 SRDRQTVIPFTIRQIKGATIGHADDPVKIDGVELAQVRLVANVMQVTEQSTYVVYDVEDCTGMIQVKMWNDQDE---NEMTATRRAACRQGVYVRIHAYLKVFNGQISVTAVDIRPVEDQNEITCHMLEAIYIHLQHTQGPKQAPATAAGWNSTS---SGFGTGGFN--------PPPGNNLSSTMALEGVSGNSGFTPVQAKA 240          
BLAST of mRNA_P-fluviatile_contig5.11183.1 vs. uniprot
Match: K3W659_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W659_GLOUD)

HSP 1 Score: 110 bits (276), Expect = 1.350e-24
Identity = 62/181 (34.25%), Postives = 103/181 (56.91%), Query Frame = 0
Query:   36 NKEKQSLLAVNIKQVLESEMMNQDSGARIDGVDVAQVKLVGCIVEIEDASTNTSYTIEDTTGRLHVKMF-HNDDEVGGSERSAEKRARNQVGVYVRIIGNIRSWKDDRHAVAYLIEPVEDMNEITYHYLEVIHNHLFNTKGPLPGNSSVGGGAAVAQPMNGVGSPGFHGSSSQQGFTSPAA 215
            +++ Q+LL +  KQ L S   + D   RID  +V  VK+VG +  +   STN ++ ++D TG +  +MF H DD    ++ +  + A+ + G+YVR++GN+R++++     A+ + P+ED NEIT+H+L+ I+ H +NTKGPL  +    G  A   P+ G          S  GF +P A
Sbjct:   44 SRDAQTLLPITAKQ-LASRNASDDDVIRIDNQEVTNVKMVGILSNVVPHSTNVNFQLDDGTGIIDGRMFLHADD----ADLAESEIAKLRDGIYVRVVGNLRTFQEKVSLSAFSVTPIEDFNEITHHFLDAIYVHCYNTKGPLQSSGGAAGANAFGTPVKG----------SSSGFDAPLA 209          
BLAST of mRNA_P-fluviatile_contig5.11183.1 vs. uniprot
Match: A0A7S0DLE7_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DLE7_9EUKA)

HSP 1 Score: 108 bits (271), Expect = 3.580e-24
Identity = 59/145 (40.69%), Postives = 86/145 (59.31%), Query Frame = 0
Query:   33 GHGNKEKQSLLAVNIKQVLESEMMNQDSGARIDGVDVAQVKLVGCIVEIEDASTNTSYTIEDTTGRLHVKMFHNDDEVGGSERSAEKRARNQVGVYVRIIGNIRSWKDDRHAVAYLIEPVEDMNEITYHYLEVIHNHLFNTKGPL 177
            G      QS+  +  KQ  E++ ++  S   IDG  +AQV++VG I+ ++  ST +SY I+D +G+L VKM+ NDD     +   E        +YVR++G +R     R  VA+ I+P++ MNEIT H L+VIH HL NTKGPL
Sbjct:   34 GQQKGRNQSMTPITCKQAREAKAID-GSSFTIDGQTIAQVRVVGLILNVDHESTQSSYGIDDGSGQLTVKMYRNDDAEDLDQHCRED-------IYVRVVGTMRELAGQRIVVAFQIQPLKSMNEITLHNLDVIHTHLRNTKGPL 170          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig5.11183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPM7_ECTSI4.910e-8868.12RPA_C domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835YU42_9STRA4.210e-4348.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D5U0_HETAK1.760e-2738.93Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3XCT1_9CHLO2.740e-2739.76Hypothetical protein (Fragment) n=1 Tax=Picocystis... [more]
A0A1Y1Z7U3_9FUNG3.790e-2638.03Replication protein A, subunit RPA32 n=1 Tax=Basid... [more]
A0A7S0HR69_9EUKA6.270e-2638.61Hypothetical protein n=2 Tax=Phaeocystis antarctic... [more]
A0A5D6XJQ9_9STRA1.610e-2536.81OB domain-containing protein (Fragment) n=1 Tax=Py... [more]
A0A7S2SSA9_9STRA1.250e-2433.33Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
K3W659_GLOUD1.350e-2434.25Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S0DLE7_9EUKA3.580e-2440.69Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 35..174
e-value: 4.3E-40
score: 138.5
IPR040260Replication factor A protein-likePANTHERPTHR13989REPLICATION PROTEIN A-RELATEDcoord: 12..226
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 43..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig5contigP-fluviatile_contig5:3186444..3193362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig5.11183.1mRNA_P-fluviatile_contig5.11183.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig5 3186397..3194054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig5.11183.1 ID=prot_P-fluviatile_contig5.11183.1|Name=mRNA_P-fluviatile_contig5.11183.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=324bp
MGGGGFGSPSGGGGGYMAGGAVDSPAGGGGSGGHGNKEKQSLLAVNIKQV
LESEMMNQDSGARIDGVDVAQVKLVGCIVEIEDASTNTSYTIEDTTGRLH
VKMFHNDDEVGGSERSAEKRARNQVGVYVRIIGNIRSWKDDRHAVAYLIE
PVEDMNEITYHYLEVIHNHLFNTKGPLPGNSSVGGGAAVAQPMNGVGSPG
FHGSSSQQGFTSPAANMHNSSSNQGAADAKGFTKVQQQASVEPQKSKEDQ
SELFPTSCQDQEKPTPILMTFLLSLSPCVRVRKTCHQPPRCTTSSSAPMT
SKGSASRTSSARFAARGSRQTMS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040260RFA2-like
IPR012340NA-bd_OB-fold