mRNA_P-fluviatile_contig105.957.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig105.957.1
Unique NamemRNA_P-fluviatile_contig105.957.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig105.957.1 vs. uniprot
Match: D7G436_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G436_ECTSI)

HSP 1 Score: 518 bits (1335), Expect = 2.730e-171
Identity = 281/509 (55.21%), Postives = 335/509 (65.82%), Query Frame = 1
Query:    1 VDIIWTFFCLVLVTLMQPGFACYEVGAISKMTSIRPILLKNIGDASVSLIAWFGMGYALSSGKDFGGGVGTSYFGLTGDPFAETPEQSSALGYLRCLYQWSFAAACTTIVSGAVADRIPFAAYLIYASLTSALIYPLLAHWVWADEGWASATRSSPLLGCGVIDFAGSGVVHMLGGVIALVLAIAARPRMGRFHYADEWDYDAQKGGSNLKNHSRLGQLREAGFEPNDMSWMTLGGFLLWVGWYGFNCGSTLQISTAESQRAAGRAAMNTTVAAAFGCIFSLIMERVYHIWSPSYRHGDVIDDPLH---------------HQDNKNATPTDKKTKDLIKDHQEADGLEGPWWKPVPWSYSTHENYHGAAVNGVLAGLVGVTAGCATMGYYSAVWVSFVSIFLYHVSYRGILCCRVDDAVGASAIHFVCGAWGLLAAGLTATDEDARLDAGYPSDEECSWHSQARANMIMTVIIFFYGVICAAIIAGIILALQKSDKIDDTETVEKRED 1482
            VD  W FFCLVLV L+Q GFA YEVGAI + TS + ILLKNIGDA+VSL+AW+ +GY  + G+D G  +GTS+F  T  PFA T   S+A+ +L CL+QWSFAA CTT+VSGAVADRIP  AYL+YA LTSAL YPLLAH VW D+GWAS  R  PL GCGVIDFAGSG+VHM GG I L ++   R R GRF  A  WD  A   GS LKNH+   QL EAGF  ND +WMTLG FLLW+GWYGFNCGS  +IST  SQ AAGRAA+NT++ AA+GC FS++ E  YH W+P YR GD I+DPLH                +     T   KKT   I  H      E   W   PWS  TH N HGAA NG+LAGLVG+TAGCATM  ++A+ VSFVS  LYHVSYRG +C  +DDAV A A+H VCGAWG++AAG T   E  RLDAGYP    CS  +Q   N +M  II  Y  +C  I+  I+   +  D+ ++   + K ED
Sbjct:   19 VDFTWRFFCLVLVLLLQGGFASYEVGAIRE-TSTQHILLKNIGDATVSLVAWYLLGYGFAFGEDAGHIIGTSFFVFTESPFAATSGNSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASPAREYPLFGCGVIDFAGSGIVHMFGGAIGLFVSRKVRSRGGRFFPAKHWDGGAN--GSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGAAWGCAFSMLFELGYHRWTPKYRRGDDIEDPLHLAPFDVDGGEEADRAERVRVAETHLSKKTLAKIAKHNAEHEKEVFTW---PWS--THINLHGAACNGILAGLVGITAGCATMSPHAAIGVSFVSALLYHVSYRGFICLMIDDAVSAGAVHLVCGAWGVIAAGFTGM-EGPRLDAGYPPQALCSRGAQVGTNFVMVAIITAYAYLCTFILWAILRGCRLVDQAEEGVVLAKGED 518          
BLAST of mRNA_P-fluviatile_contig105.957.1 vs. uniprot
Match: D7FL37_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL37_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 6.340e-118
Identity = 225/439 (51.25%), Postives = 274/439 (62.41%), Query Frame = 1
Query:    1 VDIIWTFFCLVLVTLMQPGFACYEVGAISKMTSIRPILLKNIGDASVSLIAWFGMGYALSSGKDFGGGVGTSYFGLT-GDPFAETPEQSSALGYLRCLYQWSFAAACTTIVSGAVADRIPFAAYLIYASLTSALIYPLLAHWVWADEGWASAT-----RSSPLLGCGVIDFAGSGVVHMLGGVIALVLAIAARPRMGRFHYADEWDYDAQKGGSNLKNHSRLGQLREAGFEPNDMSWMTLGGFLLWVGWYGFNCGSTLQISTAESQRAAGRAAMNTTVAAAFGCIFSLIMERVYHIWSPSYRHGDVIDDPLHH-QDNKN----------------ATPTDKKTK---DLIKDHQEADGLEGPWWKPVPWSYSTHENYHGAAVNGVLAGLVGVTAGCATMGYYSAVWVSFVSIFLYHVSYRGILCCRVDDAVGASAIHFV 1239
            +D  W F CLVLV LMQ GFA YEVG+I + TS   IL KNIGDA++SLIAW  +GYALS GKD    VG SYFGL  G+PF  T ++      L CL++WSFAA CTTIVSGAVADRI   AY +YA LTSA+ YPLLAH VWADEGWAS        S+ LL CG +DFAGSGVVHMLGG I LVL+I    R  RF  AD    +  +  ++     RL ++      P D               YGFNCGSTLQIS+ E++ AAGRAA+NTT+ AA GC+ S+  E +YH WSP YR G+ I+DPL +    KN                A P  +KT    D + D ++     G +     W  STH++ HGAA NGV+ GLVGVTAGCATM  + A+WVS VS  LYHVSYRGI+CC++DDA+ A+A+H V
Sbjct:   16 IDFTWMFVCLVLVVLMQAGFAAYEVGSI-RSTSASSILKKNIGDATLSLIAWVLVGYALSDGKDQLRIVGGSYFGLVQGEPFEATDDRDVGTALLECLFRWSFAATCTTIVSGAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTSEGESAALLNCGFVDFAGSGVVHMLGGGIGLVLSIMVENRSDRFIDADP---ELVEKNTSATLDRRLFKVSH-NLLPRDR--------------YGFNCGSTLQISSEETRNAAGRAALNTTIGAAVGCVSSMGFEIMYHWWSPKYRRGEFINDPLDYLPQTKNECSLKGKVNQLSSPAGAGPRRRKTTGATDYVVDPEDEHN-HGTF----RWRLSTHKSIHGAACNGVIVGLVGVTAGCATMLPWHAIWVSIVSALLYHVSYRGIICCKIDDAINAAAVHLV 430          
BLAST of mRNA_P-fluviatile_contig105.957.1 vs. uniprot
Match: A0A6H5L500_9PHAE (Ammonium_transp domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L500_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 5.630e-112
Identity = 206/415 (49.64%), Postives = 244/415 (58.80%), Query Frame = 1
Query:   67 YEVGAISKMTSIRPILLKNIGDASVSLIAWFGMGYALSSGKDFGGGVGTSYFGLTGDPFAETPEQSSALGYLRCLYQWSFAAACTTIVSGAVADRIPFAAYLIYASLTSALIYPLLAHWVWADEGWASATRSSPLLGCGVIDFAGSGVVHMLGGVIALVLAIAARPRMGRFHYADEWDYDAQKGGSNLKNHSRLGQLREAGFEPNDMSWMTLGGFLLWVGWYGFNCGSTLQISTAESQRAAGRAAMNTTVAA-----------------------------------------------------AFGCIFSLIMERVYHIWSPSYRHGDVIDDPLHHQ--DNKNATPTDK-------------KTKDLIKDHQEADGLEGPWWKPVPWSYSTHENYHGAAVNGVLAGLVGVTAG 1107
            ++VGAI + TS + ILLKNIGDA+VSL+AW+ +GY  + G+D G  +GTS+F  TG PFA T   S+A+ +L CL+QWSFAA CTT+VSGAVADRIP  AYL+YA LTSAL YPLLAH VWAD+GWAS  R +PL GCGVIDFAGSG+VHMLGG I L ++   R R GRF     WD         LKNH+   QL EAGF  ND +WMTLG FLLW+GWYGFNCGS  +IST ESQ AAGRAA+NT++ A                                                     A+GC FS++ E  YH WSP YR GD I+DPLH    D       D+             KT  +I  H      E   W   PWS  TH N HGAA NG+LAGLVG+TAG
Sbjct:   17 HQVGAI-RATSTKHILLKNIGDATVSLVAWYLLGYGFAFGEDAGHFIGTSFFVFTGSPFAATSGNSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWADDGWASPARENPLFGCGVIDFAGSGIVHMLGGAIGLFISKKVRSRPGRFFPPKHWD-------GTLKNHTDQPQLNEAGFRSNDATWMTLGTFLLWLGWYGFNCGSVSEISTTESQNAAGRAALNTSIGAGEHWVLLQFYTCEAPNDSLKKSWSITFEYARGGASIQIEHRTPSYRAQRWRCRAWGCAFSMLFELGYHRWSPEYRRGDDIEDPLHVATFDVDGGEEADRAERVRLAENDLGEKTLAIIAKHNAEHEKEAFTW---PWS--THINLHGAACNGILAGLVGITAG 418          
BLAST of mRNA_P-fluviatile_contig105.957.1 vs. uniprot
Match: A0A6H5JKF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF7_9PHAE)

HSP 1 Score: 331 bits (849), Expect = 4.800e-101
Identity = 217/512 (42.38%), Postives = 274/512 (53.52%), Query Frame = 1
Query:   70 EVGAISKMTSIRPILLKNIGDASVSLIAWFGMGYALSSGKDFGGGVGTSYFGL-----------------------------------------TGDPFAETPEQSSALGYLRCLYQWSFAAACTTIVSGAVADRIPFAAYLIYASLTSALIYPLLAHWVWADEGWASAT-----RSSPLLGCGVIDFAGSGVVHMLGGVIALVLAIAARPRMGRFHYADEWDYDAQKGGSNLKNHSRLGQLREAGFEPNDMSWMTLGGFLLWVGWYGFNCGSTLQISTAESQRAAGRAAMNTTVAA-----------------AFGCIFSLIMERVYHIWSPSYRHGDVIDDPLHHQDNKNAT---------PTDKKTKDLIKDHQEADGLEGPWWKPVPWSYSTHENYHGAAVNGVLAGLVGVTAGCATMGYYSAVWVSFVSIFLYHVSYRGILCCRVDDAVGASAIHFVCGAWGLLAAGLTATDEDARLDAGYPSDEE-CSWHSQARANMIMTVIIFFY 1386
            +VG+I + TS   IL KNIGDA++SL+AW  +GYALS GKD    VG SYFGL                                         +G+PF  T ++      L CL++WSFAA CTTIVS A               LTSA+ YPLLAH  WADEGWAS        S+  L CGV+DFAGSGVVHMLGG I LVL++    R  RF  A+            L   ++   L    F+ +          LL  G YGFNCGSTLQIST E++ AAGRAA+NTT+ A                 A GC+ S+  E +YH WSP YR  + I+DPL +      T         P  ++T     D ++ +           W  STH++ HGAA NGVL GLVGVTAGCATM  + A+WVS VS  +YHVSYRGI+CC +DDA+ A+A+H V G WG++AAGLT  D  AR+D G+P  E+ C+  +QA  N++M VIIF Y
Sbjct:   13 QVGSI-RSTSASSILKKNIGDATISLVAWVLVGYALSDGKDQLRIVGGSYFGLVQGENSILPVLVLTICLRGGLSDALVALGCRKWGAKDSFKVSGEPFEATDDRDVGTALLECLFRWSFAATCTTIVSDAF--------------LTSAVFYPLLAHAAWADEGWASPFLTSEGESAAWLNCGVVDFAGSGVVHMLGGGIGLVLSMVVDNRSDRFIDANP----------QLVERNKSATLDRRLFKVSHN--------LLSRGRYGFNCGSTLQISTEETRNAAGRAALNTTIGAGENEHDKHELCYQRAGWAVGCVSSMGFEIMYHWWSPEYRRREFINDPLDYMPQARNTLAGELSSQDPRRRRTTGSTDDAKDPEDEHNSG--KFRWRLSTHKSIHGAACNGVLVGLVGVTAGCATMHPWHAIWVSIVSALVYHVSYRGIICCNIDDAINAAAVHLVGGLWGVVAAGLTV-DNAARVDLGFPGQEDGCTPENQAWVNVLMAVIIFGY 488          
BLAST of mRNA_P-fluviatile_contig105.957.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 3.660e-67
Identity = 168/446 (37.67%), Postives = 233/446 (52.24%), Query Frame = 1
Query:    4 DIIWTFFCLVLVTLMQPGFACYEVGAISKMTSIRPILLKNIGDASVSLIAWFGMGYALSSGKDFGGGVGTSYFGLTGDPF-AETPEQSSALGYLRCLYQWSFAAACTTIVSGAVADRIPFAAYLIYASLTSALIYPLLAHWVWADEGWASATRSSPLL-GCGVIDFAGSGVVHMLGGVIALVLAIAARPRMGRFHYADEWDYDAQKGGSN-LKNHSRLGQLREAGFEPNDMSWMTLGGFLLWVGWYGFNCGSTLQISTAESQRAAGRAAMNTTVAAAFGCIFSLIMERVYHIWSPSYRHGDVIDDPLHHQDNKNATPTDKKTKDLIKDHQEADGLEGPWWKPVPWSYSTHENYHGAAVNGVLAGLVGVTAGCATMGYYSAVWVSFVSIFLYHVSYRGILCCRVDDAVGASAIHFVCGAWGLLAAGLTATDEDARLDAGYPSDEECS 1332
            DI W  F  +LV  MQ GFA  EVG++S + + + IL+KNIGDAS+  I W+ +GY ++ G   G  +GT+ F L G  F A+    ++   Y   L+QW+FAA   TIVSGAVA+R+ F AY+IY+ + ++ IYP++ HW WA  GWASA R + LL GCGVIDFAGSGVVHM GG+ AL  AI   PR GRF+         + G +N L   S + Q              +LG  +LW GWYGFN  STL I        A +  + TT++AAFG + ++++ +                  L H D                                           GAA NG+LAGLVGVTAGC+T     A+ +  +S F+Y  S + ++  ++DD V A  +H  CGAWG+ AA L AT ++  + A Y   ++C+
Sbjct:   30 DIFWLMFGAILVFFMQTGFAMLEVGSVS-IKNTKNILIKNIGDASLGAICWWLLGYGVAFGDTSGKFIGTNNFDLKGALFEADDGTLTNGYSYASWLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWAG-GWASAWRETDLLFGCGVIDFAGSGVVHMTGGLAALCAAIVVGPRTGRFN---------EDGTANTLPQQSAVLQ--------------SLGTLILWFGWYGFNGVSTLYIVGFAG--VAAKTMVTTTISAAFGAVTTVLLGKFN----------------LGHWDG------------------------------------------GAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYGM-AYYDRADKCA 389          
BLAST of mRNA_P-fluviatile_contig105.957.1 vs. uniprot
Match: A0A6V1QTK2_HETAK (Ammonium transporter n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QTK2_HETAK)

HSP 1 Score: 229 bits (584), Expect = 4.030e-63
Identity = 154/435 (35.40%), Postives = 212/435 (48.74%), Query Frame = 1
Query:    1 VDIIWTFFCLVLVTLMQPGFACYEVGAISKMTSIRPILLKNIGDASVSLIAWFGMGYALSSGKD------FGGGVGTSYFGLTGDPFAETPEQSSALGYLRCLYQWSFAAACTTIVSGAVADRIPFAAYLIYASLTSALIYPLLAHWVWADEGWASATRSSPLL-GCGVIDFAGSGVVHMLGGVIALVLAIAARPRMGRFHYADEWDYDAQKGGSNLKNHSRLGQLREAGFEPNDMSWMTLGGFLLWVGWYGFNCGSTLQISTAESQRAAGRAAMNTTVAAAFGCIFSLIMERVYHIWSPSYRHGDVIDDPLHHQDNKNATPTDKKTKDLIKDHQEADGLEGPWWKPVPWSYSTHENYHGAAVNGVLAGLVGVTAGCATMGYYSAVWVSFVSIFLYHVSYRGILCCRVDDAVGASAIHFVCGAWGLLAAGLTATD 1284
            VD  W  F  VLV  MQ GF   EVG I +  +++ IL+KN+ DAS+  I W+ +G+ ++ GKD        G +G   F +T D F   P       +   L+QW+FAA   TIV+G+VA+RI F+AYL+YA    + +YP + HW W   GWASA R   LL GCGV+DFAGSGVVH  GGV+AL  A    PR GRF                       GQ +E  F+     + TLG  +LW GWYGFN  STL I    +   A RA + +T++A  GCI S+++ ++         H  +ID                                                  GAA NG+L GLV +TA C+ +    A  +  +   +Y+ S   +L  ++DD V AS +H  CG WG+LA+GL A++
Sbjct:   27 VDAFWLMFGAVLVFFMQTGFGMLEVGCI-QWKNVKNILIKNVFDASLGAIVWWSIGFGVAMGKDDYVSDGSNGFIGRDLFFMTTDTFRGGPNSDKGYAWAGWLFQWAFAATTATIVTGSVAERITFSAYLVYAFCLVSFVYPCVVHWGWNANGWASAWREEDLLFGCGVLDFAGSGVVHTTGGVVALWGAKILGPRTGRFIN---------------------GQKQE--FKEVSPIYQTLGTLILWFGWYGFNGASTLYIGGYSAP--AARAMVTSTISAGAGCISSVLLAKL---------HTGIIDP-------------------------------------------------GAANNGILGGLVSITASCSVVDPEGAFVIGLIGGVIYYFSALLLLRLQIDDVVNASPVHMFCGVWGVLASGLFASE 377          
BLAST of mRNA_P-fluviatile_contig105.957.1 vs. uniprot
Match: A0A8J5XAB8_DIALT (Ammonium transporter n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XAB8_DIALT)

HSP 1 Score: 224 bits (572), Expect = 2.130e-61
Identity = 159/443 (35.89%), Postives = 219/443 (49.44%), Query Frame = 1
Query:    4 DIIWTFFCLVLVTLMQPGFACYEVGAISKMTSIRPILLKNIGDASVSLIAWFGMGYALSSGKDFGGG--VGTSYFGLTGDPFAETPEQSSALGYLRCLYQWSFAAACTTIVSGAVADRIPFAAYLIYASLTSALIYPLLAHWVWADEGWASATRSSPLLGCGVIDFAGSGVVHMLGGVIALVLAIAARPRMGRFHYADEWDYDAQKGGSNLKNHSRLGQLREAGFEPNDMSWMTLGGFLLWVGWYGFNCGSTLQISTAESQRAAGRAAMNTTVAAAFGCIFSLIMERVYHIWSPSYRHGDVIDDPLHHQDNKNATPTDKKTKDLIKDHQEADGLEGPWWKPVPWSYSTHENYHGAAVNGVLAGLVGVTAGCATMGYYSAVWVSFVSIFLY----HVSYRGILCCRVDDAVGASAIHFVCGAWGLLAAGLTATDEDARLDAGYP 1314
            D +W     VLV  MQ GFA    G + +  + + ILLKN+ DA V  + ++ +GYALS G+  GG   +G +YF LT     +T        Y   L+Q++FAA   TIVSGAVA+R   AAYL Y+   +A +YP++ HW+WA  GW SA  ++PLLG G+IDFAG GVVHM+GG+ A+  A    PR+GR        YDA     ++  HS   Q               LG F+LWVGWYGFN GSTL + T      AG+AA  TT++ A G +  LI   +Y +WS ++  G  +                                                       NGVLAGLV +TAGC+ +  ++AV +  +  F+Y     +  R +   ++DD V A A+H   G WGL+AA L AT E+ +   G P
Sbjct:   31 DAMWLIIVAVLVFFMQAGFAMLCAGLV-RAKNTKNILLKNVLDACVGALGFWSIGYALSYGQAGGGNLFIGNTYFFLTNFEGNDT--------YQSWLFQFAFAATAATIVSGAVAERTKMAAYLCYSFFLTAFVYPVVVHWIWASAGWLSAFNAAPLLGTGLIDFAGCGVVHMVGGISAICGAYICGPRLGR--------YDADGNLVDIPGHSSTLQA--------------LGTFILWVGWYGFNPGSTLAV-TGGLGAVAGKAACTTTLSGAAGAVGCLI---IYKLWSHAFDLGQTL-------------------------------------------------------NGVLAGLVSITAGCSVVEPWAAVIIGLIGSFVYTALSELVKRKL---KIDDVVDAFAVHCGGGMWGLIAASLFATTENHQAAYGVP 380          
BLAST of mRNA_P-fluviatile_contig105.957.1 vs. uniprot
Match: D7G3S7_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3S7_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 4.460e-60
Identity = 178/517 (34.43%), Postives = 244/517 (47.20%), Query Frame = 1
Query:    1 VDIIWTFFCLVLVTLMQPGFACYEVGAISKMTSIRPILLKNIGDASVSLIAWFGMGYALSSGKDF------GGGVGTSYFGLTGDPFAETPEQSSALGYLRCLYQWSFAAACTTIVSGAVADRIPFAAYLIYASLTSALIYPLLAHWVWADEGWASATRSSPLL-GCGVIDFAGSGVVHMLGGVIALVLAIAARPRMGRFHYADEWDYDAQKGGSNLKNHSRLGQLREAGFEPNDMSWMTLGGFLLWVGWYGFNCGSTLQISTAESQRAAGRAAMNTTVAAAFGCIFSLIMERVYHIWSPSYRHGDVIDDPLHHQDNKNATPTDKKTKDLIKDHQEADGLEGPWWKPVPWSYSTHENYHGAAVNGVLAGLVGVTAGCATMGYYSAVWVSFVSIFLYHVSYRGILCCRVDDAVGASAIHFVCGAWGLLAAGLTATDEDARLDAGYPSDEE---------CSWHSQARANMIMTVIIFFYGVICAAII---AGIILALQKSDKIDDTETVEKREDHGGI 1494
            V+  W  F  VLV  MQ GFA  EVGA+    + + IL+KN+ DAS+  I W+  GY ++ G D        G +GT  F LT   F  + +    + +   L+QW+FAA   TIVSGAV +R+ F AY++YA      IYP++ HW W+  GWASA R + LL  CGV+DFAGSGVVHM GG  ALV A+   PR GRF   D    +             L QL           + TLG   LW+GWYGFN  STL I        A RA +NTT+A    C+ S+ +          +R G V                     D+                              AA NGVL GLV +TAGC+ +    AV + FV+ F+Y+ S   +L  ++DD V AS +H  CG WG+LAAGL A  E       Y S+ +         C  + Q  AN+I  +++  +   C+ ++   A   + L+ S  I+D    + +  HGG+
Sbjct:   26 VNTFWLMFGAVLVFFMQTGFAMLEVGAVQAKNA-KNILIKNVFDASLGGIMWYTTGYGIALGSDSYETSGNNGFIGTDGFLLTTGAFRGSGDDVG-INWAGWLFQWAFAATTATIVSGAVVERVTFGAYVVYAMCLLGFIYPVVVHWGWSAGGWASAWRETELLMDCGVLDFAGSGVVHMTGGTAALVGAVLLGPRSGRF--IDGIPVE-------------LPQL--------SFVYQTLGTLCLWMGWYGFNGVSTLAI--VGLGEVAARAMVNTTIAGGVACVTSVTVAY--------FRIGYV---------------------DIT-----------------------------AANNGVLGGLVAITAGCSVVMPEGAVVIGFVAGFVYNASSVLLLKLQIDDVVDASPVHMFCGMWGVLAAGLLA--EKDNYGESYYSERQGDCCGAFYGCGGN-QFTANLIFVIVVLGWAGFCSFLMFTFAKYTVGLRVSKAIEDAGMDDSK--HGGM 452          
BLAST of mRNA_P-fluviatile_contig105.957.1 vs. uniprot
Match: D7G243_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G243_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 4.770e-60
Identity = 168/484 (34.71%), Postives = 236/484 (48.76%), Query Frame = 1
Query:    4 DIIWTFFCLVLVTLMQPGFACYEVGAISKMTSIRPILLKNIGDASVSLIAWFGMGYALSSGKDFGGGVGTSYFGLTGDPF-AETPEQSSALGYLRCLYQWSFAAACTTIVSGAVADRIPFAAYLIYASLTSALIYPLLAHWVWADEGWASATRSSPLL-GCGVIDFAGSGVVHMLGGVIALVLAIAARPRMGRFHYADEWDYDAQKGGSN-LKNHSRLGQLREAGFEPNDMSWMTLGGFLLWVGWYGFNCGSTLQISTAESQRAAGRAAMNTTVAAAFGCIFSLIMERVYHIWSPSYRHGDVIDDPLHHQDNKNATPTDKKTKDLIKDHQEADGLEGPWWKPVPWSYSTHENYHGAAVNGVLAGLVGVTAGCATMGYYSAVWVSFVSIFLYHVSYRGILCCRVDDAVGASAIHFVCGAWGLLAAGLTATDEDARLDAGYPSD--EECSWHSQAR-ANMIMTVIIFFYGVI------CAAIIAGI 1419
            DI W  F  +LV  MQ GFA  EVG++S + + + IL+KNIGDAS+  I W+  GY ++ G   G  +G++ F L G  F A+    ++   Y   L+QW+FAA   TIVSGAVA+R+ F AY+IY+ + ++ IYP++ HW W   GWASA     LL  CGVIDFAGSGVVHM GG+ AL  AI   PR GRF+         + G +N L   S + Q              TLG  +LW G       STL I+       A +  + TT++AAFG + ++++ +                                              L   +W              GAA NG+LAGLVGVTAGC+T     A+ +  +S F+Y  S + ++  ++DD V A  +H  CGAWG+ AA L AT ++    A Y  D  ++C+        N +   ++F   VI      C A+  GI
Sbjct:   34 DIFWLLFGAILVFFMQTGFAMLEVGSVS-IKNTKNILIKNIGDASLGAICWWLFGYGVALGDTKGRFIGSNAFALKGSHFEADDGTLTNGYSYAMWLFQWAFAATAATIVSGAVAERVSFNAYIIYSVILTSFIYPVVVHWGWGG-GWASAWVDEDLLFDCGVIDFAGSGVVHMTGGLAALAAAIVVGPRTGRFN---------EDGTANTLPQQSAVLQ--------------TLGTLILWFGXXXXXXVSTLAINGLAG--VAAKTMVTTTISAAFGAVTTVLLGK----------------------------------------------LNLGYWDA------------GAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDN--YSAAYYGDRVDKCAGAFYGGDGNAVAANVVFILAVIAWVSATCMALFLGI 430          
BLAST of mRNA_P-fluviatile_contig105.957.1 vs. uniprot
Match: A0A8J5XG33_DIALT (Ammonium transporter n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XG33_DIALT)

HSP 1 Score: 220 bits (561), Expect = 9.030e-60
Identity = 155/441 (35.15%), Postives = 215/441 (48.75%), Query Frame = 1
Query:    1 VDIIWTFFCLVLVTLMQPGFACYEVGAISKMTSIRPILLKNIGDASVSLIAWFGMGYALSSGKDFGGG--VGTSYFGLTGDPFAETPEQSSALGYLRCLYQWSFAAACTTIVSGAVADRIPFAAYLIYASLTSALIYPLLAHWVWADEGWASATRSSPLLGCGVIDFAGSGVVHMLGGVIALVLAIAARPRMGRFHYADEWDYDAQKGGSNLKNHSRLGQLREAGFEPNDMSWMTLGGFLLWVGWYGFNCGSTLQISTAESQRAAGRAAMNTTVAAAFGCIFSLIMERVYHIWSPSYRHGDVIDDPLHHQDNKNATPTDKKTKDLIKDHQEADGLEGPWWKPVPWSYSTHENYHGAAVNGVLAGLVGVTAGCATMGYYSAVWVSFVSIFLYHVSYRGIL-CCRVDDAVGASAIHFVCGAWGLLAAGLTATDEDARLDAGYP 1314
            VD ++     VLV LMQ GFA    G + +  + + ILLKN+ DA V  I ++ +GYA S G+  GG   +G +YF LT     +T        Y   L+QW+FAA   TIVSGAVA+R   AAYL Y+   +A +YP++ HWVW+  GW SA  +SPLLG G++DFAG GVVHM+GG+ A+  A    PR+GR        YDA     ++  HS   Q+              LG F+LWVGW+GFN GSTL + T      A + A+ TT++A+ G I  L +                                                          + +  H    G  +NGVLAGLV +TAGC+ +  ++AV +  +  F+Y      +    ++DD V A A+H   G WGL+AA L AT E+ +   G P
Sbjct:   30 VDAMYLVIAAVLVFLMQTGFAMLCAGLV-RAKNTKNILLKNVLDACVGAIGFWSLGYAFSYGQAGGGNPFIGNTYFFLTNFEGNDT--------YQSWLFQWAFAATAATIVSGAVAERTKMAAYLCYSFFLTAFVYPVVVHWVWSSAGWLSAFNASPLLGTGLVDFAGCGVVHMVGGISAICGAYVCGPRIGR--------YDADGSMVDIPGHSSTLQV--------------LGTFILWVGWFGFNPGSTLAV-TGGLGAVAAKCAVTTTLSASAGAIGCLAV----------------------------------------------------------YKFGAHTFELGQTLNGVLAGLVSITAGCSVVEPWAAVIIGLIGSFVYVAISEAVKRVLKIDDVVDAFAVHGGGGMWGLIAASLFATTENHQASYGVP 380          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig105.957.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G436_ECTSI2.730e-17155.21Ammonium transporter n=1 Tax=Ectocarpus siliculosu... [more]
D7FL37_ECTSI6.340e-11851.25Ammonium transporter n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5L500_9PHAE5.630e-11249.64Ammonium_transp domain-containing protein n=1 Tax=... [more]
A0A6H5JKF7_9PHAE4.800e-10142.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR22_ECTSI3.660e-6737.67Ammonium transporter n=1 Tax=Ectocarpus siliculosu... [more]
A0A6V1QTK2_HETAK4.030e-6335.40Ammonium transporter n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J5XAB8_DIALT2.130e-6135.89Ammonium transporter n=2 Tax=Diacronema lutheri Ta... [more]
D7G3S7_ECTSI4.460e-6034.43Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879... [more]
D7G243_ECTSI4.770e-6034.71Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A8J5XG33_DIALT9.030e-6035.15Ammonium transporter n=1 Tax=Diacronema lutheri Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig105contigP-fluviatile_contig105:16176..21738 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score501.5
Seed ortholog evalue4.7e-139
Seed eggNOG ortholog2880.D7G436
Preferred nameamt-1
KEGG koko:K03320
KEGG TC1.A.11
EggNOG free text desc.ammonium transmembrane transporter activity
EggNOG OGsCOG0004@1,KOG0682@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categoryother localisation
Exons11
Model size2476
Cds size1560
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815422.9162524-UTR-P-fluviatile_contig105:16175..170461622815422.9162524-UTR-P-fluviatile_contig105:16175..17046Porterinema fluviatile SAG_2381UTRP-fluviatile_contig105 16176..17046 -
1693561798.8513389-UTR-P-fluviatile_contig105:16175..170461693561798.8513389-UTR-P-fluviatile_contig105:16175..17046Porterinema fluviatile SAG_2381UTRP-fluviatile_contig105 16176..17046 -
1622815423.0646086-UTR-P-fluviatile_contig105:21693..217381622815423.0646086-UTR-P-fluviatile_contig105:21693..21738Porterinema fluviatile SAG_2381UTRP-fluviatile_contig105 21694..21738 -
1693561799.247838-UTR-P-fluviatile_contig105:21693..217381693561799.247838-UTR-P-fluviatile_contig105:21693..21738Porterinema fluviatile SAG_2381UTRP-fluviatile_contig105 21694..21738 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815422.9305856-CDS-P-fluviatile_contig105:17046..172651622815422.9305856-CDS-P-fluviatile_contig105:17046..17265Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 17047..17265 -
1693561798.8606582-CDS-P-fluviatile_contig105:17046..172651693561798.8606582-CDS-P-fluviatile_contig105:17046..17265Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 17047..17265 -
1622815422.9414458-CDS-P-fluviatile_contig105:17424..177051622815422.9414458-CDS-P-fluviatile_contig105:17424..17705Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 17425..17705 -
1693561798.8677628-CDS-P-fluviatile_contig105:17424..177051693561798.8677628-CDS-P-fluviatile_contig105:17424..17705Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 17425..17705 -
1622815422.9519484-CDS-P-fluviatile_contig105:17944..179651622815422.9519484-CDS-P-fluviatile_contig105:17944..17965Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 17945..17965 -
1693561798.875052-CDS-P-fluviatile_contig105:17944..179651693561798.875052-CDS-P-fluviatile_contig105:17944..17965Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 17945..17965 -
1622815422.9631019-CDS-P-fluviatile_contig105:18385..186461622815422.9631019-CDS-P-fluviatile_contig105:18385..18646Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 18386..18646 -
1693561798.8821259-CDS-P-fluviatile_contig105:18385..186461693561798.8821259-CDS-P-fluviatile_contig105:18385..18646Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 18386..18646 -
1622815422.9732418-CDS-P-fluviatile_contig105:18793..188831622815422.9732418-CDS-P-fluviatile_contig105:18793..18883Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 18794..18883 -
1693561798.8919926-CDS-P-fluviatile_contig105:18793..188831693561798.8919926-CDS-P-fluviatile_contig105:18793..18883Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 18794..18883 -
1622815422.9895341-CDS-P-fluviatile_contig105:19013..192651622815422.9895341-CDS-P-fluviatile_contig105:19013..19265Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 19014..19265 -
1693561798.898823-CDS-P-fluviatile_contig105:19013..192651693561798.898823-CDS-P-fluviatile_contig105:19013..19265Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 19014..19265 -
1622815423.001588-CDS-P-fluviatile_contig105:19667..197721622815423.001588-CDS-P-fluviatile_contig105:19667..19772Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 19668..19772 -
1693561798.9059095-CDS-P-fluviatile_contig105:19667..197721693561798.9059095-CDS-P-fluviatile_contig105:19667..19772Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 19668..19772 -
1622815423.0136309-CDS-P-fluviatile_contig105:19952..199941622815423.0136309-CDS-P-fluviatile_contig105:19952..19994Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 19953..19994 -
1693561798.9132044-CDS-P-fluviatile_contig105:19952..199941693561798.9132044-CDS-P-fluviatile_contig105:19952..19994Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 19953..19994 -
1622815423.027019-CDS-P-fluviatile_contig105:20164..202661622815423.027019-CDS-P-fluviatile_contig105:20164..20266Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 20165..20266 -
1693561798.9227371-CDS-P-fluviatile_contig105:20164..202661693561798.9227371-CDS-P-fluviatile_contig105:20164..20266Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 20165..20266 -
1622815423.0386317-CDS-P-fluviatile_contig105:20627..207871622815423.0386317-CDS-P-fluviatile_contig105:20627..20787Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 20628..20787 -
1693561798.932285-CDS-P-fluviatile_contig105:20627..207871693561798.932285-CDS-P-fluviatile_contig105:20627..20787Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 20628..20787 -
1622815423.0489101-CDS-P-fluviatile_contig105:21666..216931622815423.0489101-CDS-P-fluviatile_contig105:21666..21693Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 21667..21693 -
1693561799.2335927-CDS-P-fluviatile_contig105:21666..216931693561799.2335927-CDS-P-fluviatile_contig105:21666..21693Porterinema fluviatile SAG_2381CDSP-fluviatile_contig105 21667..21693 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig105.957.1prot_P-fluviatile_contig105.957.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig105 17047..21693 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig105.957.1

>prot_P-fluviatile_contig105.957.1 ID=prot_P-fluviatile_contig105.957.1|Name=mRNA_P-fluviatile_contig105.957.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=520bp
MQPGFACYEVGAISKMTSIRPILLKNIGDASVSLIAWFGMGYALSSGKDF
GGGVGTSYFGLTGDPFAETPEQSSALGYLRCLYQWSFAAACTTIVSGAVA
DRIPFAAYLIYASLTSALIYPLLAHWVWADEGWASATRSSPLLGCGVIDF
AGSGVVHMLGGVIALVLAIAARPRMGRFHYADEWDYDAQKGGSNLKNHSR
LGQLREAGFEPNDMSWMTLGGFLLWVGWYGFNCGSTLQISTAESQRAAGR
AAMNTTVAAAFGCIFSLIMERVYHIWSPSYRHGDVIDDPLHHQDNKNATP
TDKKTKDLIKDHQEADGLEGPWWKPVPWSYSTHENYHGAAVNGVLAGLVG
VTAGCATMGYYSAVWVSFVSIFLYHVSYRGILCCRVDDAVGASAIHFVCG
AWGLLAAGLTATDEDARLDAGYPSDEECSWHSQARANMIMTVIIFFYGVI
CAAIIAGIILALQKSDKIDDTETVEKREDHGGILHIERGFQNEGGTADPD
SANAGIPPSTEDEEKVAQS*
back to top

mRNA from alignment at P-fluviatile_contig105:16176..21738-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig105.957.1 ID=mRNA_P-fluviatile_contig105.957.1|Name=mRNA_P-fluviatile_contig105.957.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5563bp|location=Sequence derived from alignment at P-fluviatile_contig105:16176..21738- (Porterinema fluviatile SAG_2381)
GTGGACATCATTTGGACCTTTTTCTGTTTGGTGCTGGTTACGCTGATGCA GCCGGGCTTCGCATGCTACGAGGTGAGCCCTTTCTTGGGCGAGCGCTTGT GGACGGCTTCGCGTGTTACGAGGGGAGGCCTTTCCATGTACACGGGTGCT TGTGGAATCAACCGCCTTGTAAGCACGTGAATGGCACTACCACGGGAGGA GTAGTTGTGCCGTCCACGCCCGGGCCTGTATCCGAACAACTCTTGCGCCA CAACTTCTCGAAGGGTTGGCTACCTTGCCGTTCGTCCAAGTTACGAACAA CCTGGCCAGTCTGTTGTGGCTACGGCCCCTGAGGAGCCACGCCAACCCAA CTCTCCCAATCGGTCTTCTAGCTCAGGCAAACCCGTGCGCGATCCAATGC TGTGCCGTTCATGAAGGGCGACGAGGATTTCACGATTTCTCTGCTCTTCA AGGTCTAAGTTTGACGGGTTTAGTCATGTATGCCGGCCTCTTTGGTCCTT CGCTACCTATGACGCAACATCGAGGCTCCTGGATCACGTCACCGAAGTGC CGTGTTACGTGTGTGCAGCTGTCTGCTGGTTCCGGGTCTCTCGGGGTTGT CTCACGGTTAACAATCGAGATATTTCGGTACTACTGTAGTCTGGACTTTA TCCCATCCATACGCGTTTCACTTTTTTTCTGCTAGTTCGCCATTACACGC CGCCATCGCCGTGTTCTCTCTGCCCGATGATCATGATTTTGCGGCCACCG GGCGCGGGACAGAGCCGACATCCACCACGTGTGTTGCAGCCATCTACCCT CGGCAAGATTTTGGTTTAGGGCAAATGATGCGTCGCCCGCCGAAGAATAT GTCCGATAGGAATCATGTTGAATAGACAAGCGCGTTCGCGGTTGACGGAC GTGGCTCTTACTCGGAACCGTTTAATTGCGGCGGTTGAACTTGACTCGCA GGTCGGCGCCATAAGCAAGATGACTTCTATCCGCCCGATCTTGCTCAAAA ATATCGGAGATGCCTCCGTTAGCTTGATCGCCTGGTTTGGTATGGGGTAC GCCCTATCATCTGGAAAGGACTTTGGGGGGGGCGTGGGAACAAGCTACTT CGGTTTGACAGGTATGATTCAATATGCTATTTTTTTTATCAGAGTCGGTG GACCCGACGTTCCCTAGATAGGGTCTGCGGTGGCGAGTTTAGCAGTGAAA TATACGGAGCTAGATTTTGTCATGTGATCACCGGACTCATCATATTTTTC AGTCAACTGTGATTTGCATGCACAGAGCCGCCCAGCGCGCCGCTGAGTGT GAGAATTTTCAAGTTTATCGTGTCCAACGCTTCTACCGTTTTCCAAAATC GCCAATTCTGAAAGAACATGTACTCCCCCCGGCAAGCGCACCGGCTTCTT CGCGAGTATTTTGCCTCTACCAATGTTGGCGATATTCAAAACCTCCCTGC CTGGTCGAAACGTCTACTTTAGGTGATCCTTTCGCAGAAACGCCGGAGCA GAGCTCCGCCTTGGGCTACCTACGGTGCCTGTACCAGTGGTCTTTTGCCG CTGCGTGCACCACGATTGTATCTGGTCAGTCCCCATGTTCGTGTTGACGT CAACAAGCGAGTAGTATTGAACGTGTTGTCTAACCCGTCGCGATCTTGCC TTGTGGTACAAGGTTTTCGTCTCGCACAAATTGATTGGTCAGCAATAAAC GTGCTCATCAAGAACGCCAAACTTCCCTTCCACTCTTCGCTCAGGTGCCG TCGCCGACCGAATCCCTTTTGCGGCCTACCTCATATGTAAGTTCCGCCGG CGTCGTCTAGATGGTTTGCCACTCCGACATTTACTGGGATTCGCCCGCAA TGTTCCTGGTCTAGTGTCTCGAGGCAAAGCATGTTCCGAAGATACCTTGC AACAACATATTTCAAACACTCGAGCTCCCCACCCCACTTTCGTTGTGTGC GTCCATATTATTGCAGACGCCTCGCTAACGTCCGCTTTAATCTACCCTCT CCTTGCCCACTGGGTGTGGGCGGATGAGGGCTGGGCTTCGGCCACTCGTA GCTCCCCGCTCCTTGGCTGCGGTGAGGAGAAACGTTTACTCGCGGATGGC CTCATATGCGAAATCAAAGACAGTATATAATGAAACCATTGCGTACCATA TAGTCTACAGGCTGGGGATGTGCAGGTCAACAGAATTATGCCAAGGAGCT CTTTTGCGCTGTTGTTTTTGGGGCGCTCGGGAGAGGTCAGCTGCGGCTTA CATTGTGCATCGTCATTTCCGGAATTCTGGGCGCTGCGTATTGCTGCGTC GCAGTCCTACACTTCGAGGTGTACCAAGCACGTTACAATTTCCCCTCTGC CGTACACATCGGTGATGCTTGGCGTAGATGCAACATGAGGTTCATGAATT TCGTGGTCGTCACTCTTGTCCAGATACCGCCCGCGTCTGACGTTGACCAC GCTCAAATTGTTTGATCCTGCAGGGGTAATAGACTTCGCCGGGTCTGGTG TGGTTCACATGCTTGGTGGAGTCATCGCCCTGGTCCTCGCAATTGCTGCT AGACCACGCATGGGTCGATTCCATTATGCTGATGAATGGGACTACGATGC ACAAAAGGGAGGGTCCAACCTAAAAAACCACTCCAGACTTGGTCAGCTCC GGGAAGCGGGCTTCGAGCCGAATGACATGTCGTGGATGACGCTGGGGGGC TTCCTTCTTTGGGTTGGCTGGTATGGTAAGAAAACAGCCGCTCTTCAAAA TTCGAAGTAGTATTTCGTGGAGTGCGCGGTGCATGCGGCGGTGGCAGCAG CTTGCCTGGCTAAAAACATCGTGGATGTCCCACCACTTGCCGACAATCGC TACAGGATTTAATTGCGGAAGTACCCTTCAGATCTCCACAGCCGAGTCTC AAAGGGCCGCCGGACGCGCCGCCATGAACACCACGGTTGCCGCAGGCGAG TGTCAGCGCCTTTTTCGAATTAGGCTGTCGGCCATTGAGCAGGAAGCGCA GTTGCTCCGGGAGTGATGCTCGCTAAGTATATGTCTCTTTTCTGAACATC CCAAGTCTTGCGCCTTCCGTCGTCTGAATCTTATTGTCGCAGCTTTTGGG TGCATATTCTCTTTGATAATGGAACGCGTCTACCACATATGGTCGCCAAG TTATCGTCATGGTGACGTCATCGACGACCCGCTCCACCATCAGGACAACA AAAACGCGACTCCGACGGATAAAAAAACTAAAGACCTGATCAAGGACCAC CAAGAAGCGGACGGTCTAGAAGGCCCTTGGTGGAAACCCGTCCCCTGGTC TTACAGCACTCATGAGAACTATCACGGAGCGGCTGTGAACGGAGTCTTAG CTGGTGAGACAAGCAGGGCAAGCTTTCATTTCGCAACATGACGCCTCTTG CGGTCGGTTCACGCTACTCCTGTCATGCGTGTTTCCGCATGGGTCAAGGC CAAACAATTTCGCTCGAAGGCAGCACTAACGAACAAGACACTGCGTAGCT TGTCTGCGGAACCATTGAGAGTGCTCTCTCTCTCTAGCATATAGTGCCGG TGGTCACAAAATCAGAGATTCCGGTGGAAACCAAAGTGCCGTTTACATGA TAGGAAAATGAAACGGTTCGAAAGAAGGAATTTCACCCCTGCCCCCCAAC TACGCCAAAATGATATTGCAGTTCAGCTTGACTTTAGTCGCTCTCGAAGC TGTGCTGAATGATGACCCGTTGCCTGCGTGCGCTCCTTTCCCACCAATAC CCCTGAATTTTCGTGCAACGCAGGGCTTGTGGGGGTTACAGCAGGTGAGA AGAACTATCGTACATGTGATTCCCTGTGAGGACGCATGTAGCCCACTGAA ACGACGAAACCCTGGCGAAGGAAATATGGCGGCTGTTTGCGCGACTTCGG TAAAGGAGGCCGTAGGAGTTTGGTTGATATACTTGAATGTACCACCCCGG AGCTGCCCCCCCACAATTCATGTGATTTCAACCCTCCATTTTGTTCCCCG CCGCAACAATATTGTCCGTGTTACCTACTCTAGGATGTGCGACCATGGGC TACTATTCTGCGGTGTGGGTATCCTTCGTCTCGATCTTCCTGTACCACGT GTCGTACCGTGGGATACTGTGCTGTAGAGTTGACGATGCTGTCGGAGCGA GCGCGATTCATTTTGTATGTGGAGCTTGGGGCCTCTTGGCAGCGGGGCTT ACGGCCACGGATGAGGACGCCCGCTTGGACGCTGGATATCCTTCGGACGA AGAGTGCAGCTGGCATTCCCAGGCTCGAGCCAACATGATAATGACAGTCA TAATATTTTTTTATGTAAGTCGGGGTGTCCCACTGAAGGATAGACAGTAT AGAATCGGCTAGTCGAATCGGCTCCACGTCCGTGATCACACTATTATTGC GAGCATATCTGGTGCTTCTGCGACTTACCATGCCAAATCCACGCCCAATT GCCTGTGACGGCTTCGACAACAGGGTGTGATCTGCGCCGCGATCATCGCC GGCATAATATTGGCGCTGCAGAAGAGCGACAAAATTGACGATACTGAAAC TGTCGAAAAACGGGAGGACCATGGAGGAATCTTACACATAGAGAGGGGTT TTCAAAACGAAGGAGGAACAGCTGACCCTGACTCTGCAAACGCTGGTATA CCGCCGTCTACGGAAGATGAGGAGAAAGTTGCACAATCGTGAAGGAGAAC GTCTCCTTGTTTGCGGACTTCGCAAGAGCGACTCGGTGACGGCCCGCAGT GACGCAAATATCGGGAAATGTATCCGTTCGTTGCGGTATACGTATATTTT AGGAGTGTTGTCTGCGTCCTCGTTGGCGTCAATCATATCGATTGGCGCGC TGAGAGAGAACAAATTTTTGAGGAAGAGCTCGAAAGAGCCCGTGTACCTC CCATCGCTTGCTTAGGGGTGGGCAGATTGACCGAGCGCCGGTTTCGTCTG CAGTAGCCGACGTGCAGTTTTTCCTTGATCGTCGATGCAGCGAGCCCTCA TGTATTTTTGATTGATCGGAACAATTGTTTCCCCGATTTTTCTTCGGGTC TTCTTCAGTCGGTGACATGCCCCCAGATTGGAACGCAGTCTCCACGATTT TTTCCGGGTTACGGTTGGAACACATCGTCTACAGGTGTTCACGTGTGTGT TGCCATTCCCACATGAGCGTCCTCCGATTTTAGCTTTAGAAGAACGCCCG CTTGGGTGGTTCAGGCAGCTTTTCATGTAGGGGTTTCCCTCTCAAGCCTG ATGCCTTTTAAGATTTGTGTGTGCATCGTCTGCATTTTGTTCATCATGCA ATGTATTTTCTTTTTCATATATATTTTGACTGTTGTAGTCGTTCGCGTCT AAGCCTCTCTTGATTGGGTTAGTCGGTAGCCCGATTTTCATTTCAACGCT GAGCGAAGCGAGCGACTCGTCTACGAACGATCTTGCACTGTTCGCGGGGG GAATTTCGTCGCTCGGAGGATACTGGGTTTCGGCTTAACCAGGGGTTGTT GTCTTCTAATCAGTATTCCAACTATTCGTTTTTTTCTTGGGTGTGCTGCA GCTGCGAGCGACT
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig105:16176..21738-

>mRNA_P-fluviatile_contig105.957.1 ID=mRNA_P-fluviatile_contig105.957.1|Name=mRNA_P-fluviatile_contig105.957.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3120bp|location=Sequence derived from alignment at P-fluviatile_contig105:16176..21738- (Porterinema fluviatile SAG_2381)
ATGCAGCCGGGCTTCGCATGCTACGAGATGCAGCCGGGCTTCGCATGCTA
CGAGGTCGGCGCCATAAGCAAGATGACTTCTATCCGCCCGATCTTGCTCA
AAAATATCGGAGATGCCTCCGTTAGCTTGATCGCCTGGTTTGGTATGGGG
TACGCCCTATCATCTGGAAAGGACTTTGGGGGGGGCGTGGGAACAAGCTA
CTTCGGTTTGACAGGTCGGCGCCATAAGCAAGATGACTTCTATCCGCCCG
ATCTTGCTCAAAAATATCGGAGATGCCTCCGTTAGCTTGATCGCCTGGTT
TGGTATGGGGTACGCCCTATCATCTGGAAAGGACTTTGGGGGGGGCGTGG
GAACAAGCTACTTCGGTTTGACAGGTGATCCTTTCGCAGAAACGCCGGAG
CAGAGCTCCGCCTTGGGCTACCTACGGTGCCTGTACCAGTGGTCTTTTGC
CGCTGCGTGCACCACGATTGTATCTGGTGATCCTTTCGCAGAAACGCCGG
AGCAGAGCTCCGCCTTGGGCTACCTACGGTGCCTGTACCAGTGGTCTTTT
GCCGCTGCGTGCACCACGATTGTATCTGGTGCCGTCGCCGACCGAATCCC
TTTTGCGGCCTACCTCATATGTGCCGTCGCCGACCGAATCCCTTTTGCGG
CCTACCTCATATACGCCTCGCTAACGTCCGCTTTAATCTACCCTCTCCTT
GCCCACTGGGTGTGGGCGGATGAGGGCTGGGCTTCGGCCACTCGTAGCTC
CCCGCTCCTTGGCTGCGACGCCTCGCTAACGTCCGCTTTAATCTACCCTC
TCCTTGCCCACTGGGTGTGGGCGGATGAGGGCTGGGCTTCGGCCACTCGT
AGCTCCCCGCTCCTTGGCTGCGGGGTAATAGACTTCGCCGGGTCTGGTGT
GGTTCACATGCTTGGTGGAGTCATCGCCCTGGTCCTCGCAATTGCTGCTA
GACCACGCATGGGTCGATTCCATTATGCTGATGAATGGGACTACGATGCA
CAAAAGGGAGGGTCCAACCTAAAAAACCACTCCAGACTTGGTCAGCTCCG
GGAAGCGGGCTTCGAGCCGAATGACATGTCGTGGATGACGCTGGGGGGCT
TCCTTCTTTGGGTTGGCTGGTATGGGGTAATAGACTTCGCCGGGTCTGGT
GTGGTTCACATGCTTGGTGGAGTCATCGCCCTGGTCCTCGCAATTGCTGC
TAGACCACGCATGGGTCGATTCCATTATGCTGATGAATGGGACTACGATG
CACAAAAGGGAGGGTCCAACCTAAAAAACCACTCCAGACTTGGTCAGCTC
CGGGAAGCGGGCTTCGAGCCGAATGACATGTCGTGGATGACGCTGGGGGG
CTTCCTTCTTTGGGTTGGCTGGTATGGATTTAATTGCGGAAGTACCCTTC
AGATCTCCACAGCCGAGTCTCAAAGGGCCGCCGGACGCGCCGCCATGAAC
ACCACGGTTGCCGCAGGATTTAATTGCGGAAGTACCCTTCAGATCTCCAC
AGCCGAGTCTCAAAGGGCCGCCGGACGCGCCGCCATGAACACCACGGTTG
CCGCAGCTTTTGGGTGCATATTCTCTTTGATAATGGAACGCGTCTACCAC
ATATGGTCGCCAAGTTATCGTCATGGTGACGTCATCGACGACCCGCTCCA
CCATCAGGACAACAAAAACGCGACTCCGACGGATAAAAAAACTAAAGACC
TGATCAAGGACCACCAAGAAGCGGACGGTCTAGAAGGCCCTTGGTGGAAA
CCCGTCCCCTGGTCTTACAGCACTCATGAGAACTATCACGGAGCGGCTGT
GAACGGAGTCTTAGCTGCTTTTGGGTGCATATTCTCTTTGATAATGGAAC
GCGTCTACCACATATGGTCGCCAAGTTATCGTCATGGTGACGTCATCGAC
GACCCGCTCCACCATCAGGACAACAAAAACGCGACTCCGACGGATAAAAA
AACTAAAGACCTGATCAAGGACCACCAAGAAGCGGACGGTCTAGAAGGCC
CTTGGTGGAAACCCGTCCCCTGGTCTTACAGCACTCATGAGAACTATCAC
GGAGCGGCTGTGAACGGAGTCTTAGCTGGGCTTGTGGGGGTTACAGCAGG
GCTTGTGGGGGTTACAGCAGGATGTGCGACCATGGGCTACTATTCTGCGG
TGTGGGTATCCTTCGTCTCGATCTTCCTGTACCACGTGTCGTACCGTGGG
ATACTGTGCTGTAGAGTTGACGATGCTGTCGGAGCGAGCGCGATTCATTT
TGTATGTGGAGCTTGGGGCCTCTTGGCAGCGGGGCTTACGGCCACGGATG
AGGACGCCCGCTTGGACGCTGGATATCCTTCGGACGAAGAGTGCAGCTGG
CATTCCCAGGCTCGAGCCAACATGATAATGACAGTCATAATATTTTTTTA
TGATGTGCGACCATGGGCTACTATTCTGCGGTGTGGGTATCCTTCGTCTC
GATCTTCCTGTACCACGTGTCGTACCGTGGGATACTGTGCTGTAGAGTTG
ACGATGCTGTCGGAGCGAGCGCGATTCATTTTGTATGTGGAGCTTGGGGC
CTCTTGGCAGCGGGGCTTACGGCCACGGATGAGGACGCCCGCTTGGACGC
TGGATATCCTTCGGACGAAGAGTGCAGCTGGCATTCCCAGGCTCGAGCCA
ACATGATAATGACAGTCATAATATTTTTTTATGGTGTGATCTGCGCCGCG
ATCATCGCCGGCATAATATTGGCGCTGCAGAAGAGCGACAAAATTGACGA
TACTGAAACTGTCGAAAAACGGGAGGACCATGGAGGAATCTTACACATAG
AGAGGGGTTTTCAAAACGAAGGAGGAACAGCTGACCCTGACTCTGCAAAC
GCTGGTATACCGCCGTCTACGGAAGATGAGGAGAAAGTTGCACAATCGTG
AGGTGTGATCTGCGCCGCGATCATCGCCGGCATAATATTGGCGCTGCAGA
AGAGCGACAAAATTGACGATACTGAAACTGTCGAAAAACGGGAGGACCAT
GGAGGAATCTTACACATAGAGAGGGGTTTTCAAAACGAAGGAGGAACAGC
TGACCCTGACTCTGCAAACGCTGGTATACCGCCGTCTACGGAAGATGAGG
AGAAAGTTGCACAATCGTGA
back to top