mRNA_P-fluviatile_contig1.384.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.384.1
Unique NamemRNA_P-fluviatile_contig1.384.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.384.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4495830..4498015 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size2186
Cds size1101
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.384.1prot_P-fluviatile_contig1.384.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 4495867..4496967 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815270.2048619-UTR-P-fluviatile_contig1:4495829..44958661622815270.2048619-UTR-P-fluviatile_contig1:4495829..4495866Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4495830..4495866 +
1693561321.9492111-UTR-P-fluviatile_contig1:4495829..44958661693561321.9492111-UTR-P-fluviatile_contig1:4495829..4495866Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4495830..4495866 +
1622815270.2309067-UTR-P-fluviatile_contig1:4496967..44980151622815270.2309067-UTR-P-fluviatile_contig1:4496967..4498015Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4496968..4498015 +
1693561321.9977741-UTR-P-fluviatile_contig1:4496967..44980151693561321.9977741-UTR-P-fluviatile_contig1:4496967..4498015Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 4496968..4498015 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815270.2190015-CDS-P-fluviatile_contig1:4495866..44969671622815270.2190015-CDS-P-fluviatile_contig1:4495866..4496967Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4495867..4496967 +
1693561321.9837794-CDS-P-fluviatile_contig1:4495866..44969671693561321.9837794-CDS-P-fluviatile_contig1:4495866..4496967Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4495867..4496967 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.384.1

>prot_P-fluviatile_contig1.384.1 ID=prot_P-fluviatile_contig1.384.1|Name=mRNA_P-fluviatile_contig1.384.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=367bp
MTKHENQGKNLLRMLQAAQPPPAASSATLDHSTPRSSDNPQSSYALAATD
VRSAAAGEQYYPEPSTANEVSADLLPRPGASGNTPARSAGANLLRMLRSP
QLKPAVEAAETPLQQPHQPQDPRQIPPVPHQPPSQRLALPRNPSTPLSKR
VAAEQERFLKNFLAIGDGDNGIENSGADPLPVSQQQQQQQQQQHRTTVAL
ATPPTPPSPTLTATLAPAAVAPARGAEKSKHTGQRGRNSNTAANQGRGGR
GSGGREGRGRGLRTPQHGGTGGRESKRGKGRGGGGKGGPQRQLRRLRTLG
RPSKTLPTRRAFRSRRFSTSIWTLLHRGAKKVRRRLLLTGEKACWSYSRR
GVGARMELVQLLEREP*
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mRNA from alignment at P-fluviatile_contig1:4495830..4498015+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.384.1 ID=mRNA_P-fluviatile_contig1.384.1|Name=mRNA_P-fluviatile_contig1.384.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2186bp|location=Sequence derived from alignment at P-fluviatile_contig1:4495830..4498015+ (Porterinema fluviatile SAG_2381)
CGAGAAAAAAGCGTGGCGAGGAGGGCAGCTAACAAAAATGACTAAGCACG
AGAATCAAGGGAAAAATCTTCTCAGGATGCTGCAGGCCGCGCAGCCGCCG
CCCGCGGCATCCAGCGCAACGCTTGATCATTCCACACCGAGATCGTCGGA
TAATCCTCAGTCGTCGTATGCATTGGCTGCAACCGACGTGCGCAGCGCCG
CGGCCGGGGAGCAATATTACCCTGAACCATCAACAGCTAATGAGGTATCT
GCCGATCTTCTCCCCCGCCCAGGTGCCTCCGGGAACACGCCCGCGCGATC
AGCCGGCGCAAACCTCCTGCGAATGCTACGGTCTCCGCAGTTGAAGCCTG
CTGTAGAGGCGGCGGAAACACCTCTTCAACAACCGCATCAACCGCAAGAC
CCGCGCCAAATTCCACCGGTGCCACACCAGCCCCCATCGCAGAGGTTGGC
CTTGCCCCGAAATCCATCGACGCCGCTCAGCAAACGCGTTGCCGCCGAGC
AGGAGAGATTTCTCAAGAATTTTCTCGCAATCGGCGACGGCGACAACGGC
ATTGAGAACAGTGGCGCTGATCCCTTGCCGGTTTCTCAGCAGCAGCAGCA
ACAACAACAGCAGCAGCACCGAACCACTGTTGCGCTGGCGACACCACCAA
CACCCCCTTCACCAACATTGACAGCAACATTAGCACCGGCAGCGGTAGCA
CCAGCACGTGGAGCCGAGAAGAGCAAGCACACAGGGCAAAGGGGCCGAAA
TAGCAACACCGCCGCAAACCAAGGACGAGGAGGACGGGGCAGTGGCGGCA
GAGAGGGCAGAGGGCGGGGTTTGCGGACCCCGCAGCACGGCGGAACCGGC
GGGCGGGAGAGTAAAAGGGGAAAGGGGAGGGGCGGAGGTGGGAAGGGGGG
CCCGCAGCGCCAGCTCCGTCGCCTACGTACGCTTGGTCGGCCTTCCAAAA
CTCTCCCGACCCGAAGAGCATTCCGATCCCGTCGCTTCAGCACTTCAATC
TGGACGCTTCTCCATCGGGGGGCGAAGAAAGTGCGGCGCCGCCTCCTCTT
GACTGGCGAGAAAGCATGCTGGAGTTACAGCAGGCGGGGGGTGGGGGCGA
GGATGGAGCTGGTACAACTTCTCGAGAGGGAGCCTTGAGCACCCCGCCCC
CGGCGGCGAGGACTACCACGACCCCCGCGGCGGAGAGGAGCAGTCGAAGC
TCGGCCAAGAAGGCGGAAGATGACATCAAACGAATGCTGCGATTGGGCTA
GTCATTGCTTTTTTATTTGATTGCTCGAGGGTGAGACTCAGGGGTGTACA
GAGGCTATGATTTCTGCCTGGTTTCCACAGCAGGGTAATTGCCTCACTCG
ACGCACACAGCAGCAGCCTGAACGTCGTTCCTAAGAGTGTGTCTTATAGT
GCATCATGCGAACGCCTCTCTTCTTTTGTAGGCGCAATAAGCAGGAACCT
TTTTGTAGGCAACCGTGGATGTATGTAGATCGGTGCTCCCCTTGACCGCG
ACAGAAACAAGAAACCGTAGCTGTCTACTCCAGTGTACATACTTCGTGCA
TGCGAAGCTAGAGTTACTTGAGTCCAATTGGGACAGGGACTACCTACAAC
TTCGCTCGCGCAGCCTTACGGGTGGCTAACTTGGTGAGCAGTCACGTACC
TTTGTGTCCTAGCGGTAACGTTATCGGACTCACGGCCCCGGCGTTGTTTA
GGAACGCAGAACGCTGTTTTGGCCGCGCGTACCTAATTGTTTTATGTTGT
CGACATCATCCGCTTTTGTGGCAGCGCTTCCTTCTCCTTGAAGGTTCAAA
CCAAATGGAACAGAAAcCCCCTTCGTGTCACATGCCCATGTTGCGCTAGT
GTGGTGGCCGGACAGGTGGTGCCTCGTTTTTTCTCGGGACGGGTTCACCA
AAGTTGCCTTTGTCGTCGTTCGTGATGGGTCAAACGAGAGTTGTCGCAAT
CTGCTTCCCTTGAATTTAATGGTTTTTGAAGGGCTTGCTAGCTGCAGCAT
TCTCGTTGGTTTGACTGCCGTGGATTTCTCGGCACCAAACTGTTTCGGTT
TCCTCGCCCTCCTGAACCCAATGAATTGCCTTAATGACGCGCACCCCCCC
TGCTCGGTAAGTTTGAGGTACACCCGAGCCATCATCATAAGGGCTGTGTT
GGGGTCTGAGATTTCTTGTCGTAAAGACAGTCAGCC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:4495830..4498015+

>mRNA_P-fluviatile_contig1.384.1 ID=mRNA_P-fluviatile_contig1.384.1|Name=mRNA_P-fluviatile_contig1.384.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2202bp|location=Sequence derived from alignment at P-fluviatile_contig1:4495830..4498015+ (Porterinema fluviatile SAG_2381)
ATGACTAAGCACGAGAATCAAGGGAAAAATCTTCTCAGGATGCTGCAGGC
CGCGCAGCCGCCGCCCGCGGCATCCAGCGCAACGCTTGATCATTCCACAC
CGAGATCGTCGGATAATCCTCAGTCGTCGTATGCATTGGCTGCAACCGAC
GTGCGCAGCGCCGCGGCCGGGGAGCAATATTACCCTGAACCATCAACAGC
TAATGAGGTATCTGCCGATCTTCTCCCCCGCCCAGGTGCCTCCGGGAACA
CGCCCGCGCGATCAGCCGGCGCAAACCTCCTGCGAATGCTACGGTCTCCG
CAGTTGAAGCCTGCTGTAGAGGCGGCGGAAACACCTCTTCAACAACCGCA
TCAACCGCAAGACCCGCGCCAAATTCCACCGGTGCCACACCAGCCCCCAT
CGCAGAGGTTGGCCTTGCCCCGAAATCCATCGACGCCGCTCAGCAAACGC
GTTGCCGCCGAGCAGGAGAGATTTCTCAAGAATTTTCTCGCAATCGGCGA
CGGCGACAACGGCATTGAGAACAGTGGCGCTGATCCCTTGCCGGTTTCTC
AGCAGCAGCAGCAACAACAACAGCAGCAGCACCGAACCACTGTTGCGCTG
GCGACACCACCAACACCCCCTTCACCAACATTGACAGCAACATTAGCACC
GGCAGCGGTAGCACCAGCACGTGGAGCCGAGAAGAGCAAGCACACAGGGC
AAAGGGGCCGAAATAGCAACACCGCCGCAAACCAAGGACGAGGAGGACGG
GGCAGTGGCGGCAGAGAGGGCAGAGGGCGGGGTTTGCGGACCCCGCAGCA
CGGCGGAACCGGCGGGCGGGAGAGTAAAAGGGGAAAGGGGAGGGGCGGAG
GTGGGAAGGGGGGCCCGCAGCGCCAGCTCCGTCGCCTACGTACGCTTGGT
CGGCCTTCCAAAACTCTCCCGACCCGAAGAGCATTCCGATCCCGTCGCTT
CAGCACTTCAATCTGGACGCTTCTCCATCGGGGGGCGAAGAAAGTGCGGC
GCCGCCTCCTCTTGACTGGCGAGAAAGCATGCTGGAGTTACAGCAGGCGG
GGGGTGGGGGCGAGGATGGAGCTGGTACAACTTCTCGAGAGGGAGCCTTG
AATGACTAAGCACGAGAATCAAGGGAAAAATCTTCTCAGGATGCTGCAGG
CCGCGCAGCCGCCGCCCGCGGCATCCAGCGCAACGCTTGATCATTCCACA
CCGAGATCGTCGGATAATCCTCAGTCGTCGTATGCATTGGCTGCAACCGA
CGTGCGCAGCGCCGCGGCCGGGGAGCAATATTACCCTGAACCATCAACAG
CTAATGAGGTATCTGCCGATCTTCTCCCCCGCCCAGGTGCCTCCGGGAAC
ACGCCCGCGCGATCAGCCGGCGCAAACCTCCTGCGAATGCTACGGTCTCC
GCAGTTGAAGCCTGCTGTAGAGGCGGCGGAAACACCTCTTCAACAACCGC
ATCAACCGCAAGACCCGCGCCAAATTCCACCGGTGCCACACCAGCCCCCA
TCGCAGAGGTTGGCCTTGCCCCGAAATCCATCGACGCCGCTCAGCAAACG
CGTTGCCGCCGAGCAGGAGAGATTTCTCAAGAATTTTCTCGCAATCGGCG
ACGGCGACAACGGCATTGAGAACAGTGGCGCTGATCCCTTGCCGGTTTCT
CAGCAGCAGCAGCAACAACAACAGCAGCAGCACCGAACCACTGTTGCGCT
GGCGACACCACCAACACCCCCTTCACCAACATTGACAGCAACATTAGCAC
CGGCAGCGGTAGCACCAGCACGTGGAGCCGAGAAGAGCAAGCACACAGGG
CAAAGGGGCCGAAATAGCAACACCGCCGCAAACCAAGGACGAGGAGGACG
GGGCAGTGGCGGCAGAGAGGGCAGAGGGCGGGGTTTGCGGACCCCGCAGC
ACGGCGGAACCGGCGGGCGGGAGAGTAAAAGGGGAAAGGGGAGGGGCGGA
GGTGGGAAGGGGGGCCCGCAGCGCCAGCTCCGTCGCCTACGTACGCTTGG
TCGGCCTTCCAAAACTCTCCCGACCCGAAGAGCATTCCGATCCCGTCGCT
TCAGCACTTCAATCTGGACGCTTCTCCATCGGGGGGCGAAGAAAGTGCGG
CGCCGCCTCCTCTTGACTGGCGAGAAAGCATGCTGGAGTTACAGCAGGCG
GGGGGTGGGGGCGAGGATGGAGCTGGTACAACTTCTCGAGAGGGAGCCTT
GA
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