mRNA_P-fluviatile_contig10.689.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig10.689.1
Unique NamemRNA_P-fluviatile_contig10.689.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig10.689.1 vs. uniprot
Match: D8LTS7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTS7_ECTSI)

HSP 1 Score: 445 bits (1145), Expect = 5.400e-155
Identity = 246/308 (79.87%), Postives = 265/308 (86.04%), Query Frame = 1
Query:   19 MAPMTRRSRCLGCTLLAAALSTVSSFIAPVVTQ-QGVFA-------GQHVSTKPQHVLRRPARGNGRDMVMMGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNEDTNKQLADTLKEAKANSVPKDNIARAIKRAVDGSQGDFKEVVYEAYGHGGTGMVVTALTDNVNRAIADVKAVWKKHGLKQAAAGSVLFQFDKRGRVVIEGAVDEEQVIEAAIEAGIDEVEVVEGDEEGTSWILTTPTDLMTLAGALEKAGITGETGLALIPSGLAEVDDEAMELNLAAVEALLELEDVDSVDHNMA 918
            MAP+   +RCLGC L AAALS +S+FIAP  +Q QG+ A       G+              RG+   +VMMGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNEDTNKQLADT+KEAK NSVPKDNIARAIKRAVDGSQGDFKEV+YEAYGHGGTGMVVTALTDNVNRAIADVKAVWKK GLKQAA GSVLFQF+KRGRV ++G VDEEQVIEAAIEAG+D+VEVVEGD EGTSWILTTP DLMTL GAL +AGITGETGLALIPSGLA+VDDEAMELNLAAVEALLELEDVD+VDHNMA
Sbjct:    1 MAPV--GARCLGCALFAAALSGISAFIAPTASQLQGITALGRRHHDGRSHQPTQXXXXXXXGRGSAAGVVMMGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNEDTNKQLADTIKEAKHNSVPKDNIARAIKRAVDGSQGDFKEVIYEAYGHGGTGMVVTALTDNVNRAIADVKAVWKKQGLKQAAQGSVLFQFEKRGRVEVQGEVDEEQVIEAAIEAGVDDVEVVEGDHEGTSWILTTPKDLMTLTGALSEAGITGETGLALIPSGLADVDDEAMELNLAAVEALLELEDVDTVDHNMA 306          
BLAST of mRNA_P-fluviatile_contig10.689.1 vs. uniprot
Match: A0A836C9R2_9STRA (Transcriptional regulator TACO1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R2_9STRA)

HSP 1 Score: 296 bits (758), Expect = 1.830e-96
Identity = 169/288 (58.68%), Postives = 205/288 (71.18%), Query Frame = 1
Query:   70 AALSTVSSFIAPVV-----TQQGVFAGQHVSTKPQHVLRRPARGNGRDMVMMGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNEDTNKQLADTLKEAKANSVPKDNIARAIKRAVDGSQGDFKEVVYEAYGHGGTGMVVTALTDNVNRAIADVKAVWKKHGLKQAAAGSVLFQFDKRGRVVIEGAVDEEQVIEAAIEAGIDEVEVVEGDEEGTSWILTTPTDLMTLAGALEKAGITGETGLALIPSGLAEVDDEAMELNLAAVEALLELEDVDSVDHNMA 918
            A+L+    F+AP       T  G F G H  T   H  RR        +VMMGRRA KIA+ K + D KR K FARIGKKIIMAVKAGGP+ED NK L+D +KEAK  +VPKDNI RAIKRA +G+QGD+KE  YEAYGHGG G+++TALTDNVNRA AD++ +  K GLK A++GSV FQF +RG++ +   +DEEQVIEAAI A +D+VEVVEG+EEGTSW+LT P+ L  L   L   GITGE  LA IP+ + EV D  MELNLAA+EAL  L+DVD V+HNMA
Sbjct:   11 ASLACAQGFLAPAARCPTSTSSG-FTG-HAPTCDSHESRR-----SHTVVMMGRRAEKIARTKEKGDLKRTKIFARIGKKIIMAVKAGGPSEDANKLLSDLIKEAKLYNVPKDNIQRAIKRATEGTQGDYKENSYEAYGHGGIGLIITALTDNVNRANADIRTLGTKKGLKMASSGSVAFQFTRRGKIEVNAVLDEEQVIEAAIAADVDDVEVVEGEEEGTSWVLTDPSMLSMLVDGLAAVGITGEPSLAHIPNEVVEVSDVDMELNLAAIEALEGLDDVDQVEHNMA 291          
BLAST of mRNA_P-fluviatile_contig10.689.1 vs. uniprot
Match: A0A6S9GJB7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GJB7_HETAK)

HSP 1 Score: 238 bits (608), Expect = 8.560e-74
Identity = 129/239 (53.97%), Postives = 170/239 (71.13%), Query Frame = 1
Query:  199 MVMMGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNEDTNKQLADTLKEAKANSVPKDNIARAIKRAVDGSQGDFKEVVYEAYGHGGTGMVVTALTDNVNRAIADVKAVWKKHGLKQAAAGSVLFQFDKRGRVVIEGAVDEEQVIEAAIEAGIDEVEVVEGDEEGTSWILTTPTDLMTLAGALEKAGITGETGLALIPSGLAEVDDEAMELNLAAVEALLELEDVDSVDHNM 915
            +VMMGRR+ KIA+ KG EDAKRGK FARIGKKII+AVKAGGP  ++NK LAD LKEAK+ +VPK+NI RAIKRA      DFKE VYEAYG GG G++++ LTDN NRA+ D+K   KK  +  A++GSV F FDK+G + +   +DE+ V+E A+E G+D+  + EG+EEGTS +   P +   +A ALE AG   +  LA +P+   + D+   E NLA +EAL EL+DVD V+HN+
Sbjct:   48 LVMMGRRSEKIARKKGSEDAKRGKIFARIGKKIIVAVKAGGPVVESNKALADILKEAKSYNVPKENIDRAIKRAEAADAADFKEAVYEAYGAGGVGIIISCLTDNTNRALTDIKNAIKKSEVTLASSGSVAFNFDKKGCLEVASELDEDTVLEIALEGGVDDFVLEEGEEEGTSVVYVAPGETKLMADALEAAGHAPKPSLANVPNVWVDCDEATAEANLAVIEALEELDDVDCVEHNI 286          
BLAST of mRNA_P-fluviatile_contig10.689.1 vs. uniprot
Match: A0A7S1TSS5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSS5_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.060e-68
Identity = 128/244 (52.46%), Postives = 168/244 (68.85%), Query Frame = 1
Query:  199 MVMMGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNEDTNKQLADTLKEAKANSVPKDNIARAIKRAVDGSQGDFKEVVYEAYGHGGTGMVVTALTDNVNRAIADVKAVWKKHGLKQAAAGSVLFQFDKRGRVVIEGAVDEEQVIEAAIEAGIDEVEVVEG---DEEGTSWILTTPTDLMTLAGAL-EKAGITGET-GLALIPSGLAEVDDEAMELNLAAVEALLELEDVDSVDHNM 915
            +VMMGRRAAKIA  KG++DA + KA+ARIGK II+AVKAGGP+ ++N+QL+  L EAK   VPKDNI RAI RA      DFKE V+EAYG GG G+++  L+DN NRA   VK   KK GL  AA+GSV F FD+RGR+ ++G +DEE+V+E AIEA +D+ E+      D+E  + I T P  +  L  AL E  G+ G T  L  +P  L + +DE  ++N+AA++ LLE +DVDSVDHNM
Sbjct:   62 VVMMGRRAAKIAARKGKQDALKAKAYARIGKMIIIAVKAGGPDPESNRQLSQVLLEAKGVGVPKDNIKRAIDRASSADAADFKESVFEAYGKGGVGLLINVLSDNANRAATQVKTAIKKGGLTAAASGSVAFNFDRRGRLEVKGLLDEEEVLEVAIEADVDDYEMSTAKNDDDEDITVIFTAPESMSALGSALGEMDGVEGVTPSLVNVPKSLMDCEDEDYDINVAAIDLLLESDDVDSVDHNM 305          
BLAST of mRNA_P-fluviatile_contig10.689.1 vs. uniprot
Match: A0A7S2EDJ1_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EDJ1_TRICV)

HSP 1 Score: 208 bits (530), Expect = 6.070e-62
Identity = 120/242 (49.59%), Postives = 157/242 (64.88%), Query Frame = 1
Query:  202 VMMGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNE-DTNKQLADTLKEAKANSVPKDNIARAIKRAVDGSQGDFKEVVYEAYGHGGTGMVVTALTDNVNRAIADVKAVWKKHGLKQAAAGSVLFQFDKRGRVVIEGAVDEEQVIEAAIEAGIDEVEVVEGDEEGTSWILTTPTDLMTLAGALEKAGITG--ETGLALIPSGLAEVDDEAMELNLAAVEALLELEDVDSVDHNMA 918
            + MGR AA  A  K + DAK+ K  A  GKKIIMAVK GG  + + N+QLA+ +K AKANSVP DNI RAIKRA +    +F E  +EAYG GG  M++  L+DN NRA ADVKA   K G K A  GSVLF +D+RG+V +   +DEE+++ AAI+AG D++E+ EGDEEGTS + T P D   L  A++  G     +  LA +     E  DE  E N+  ++AL EL+DVDSV+HNM+
Sbjct:   60 LFMGRAAAVRAATKSKTDAKKAKTNALFGKKIIMAVKNGGSTDPNANRQLAEVIKAAKANSVPVDNINRAIKRASETDASNFSESTFEAYGMGGASMIINVLSDNANRATADVKACVNKRGAKIAEQGSVLFMYDRRGKVEVPAVLDEEEILMAAIDAGCDDMELAEGDEEGTSVVYTEPQDASKLLDAVKSLGFEEGVKMSLAWVSKAPVECSDEDFEKNMEVIDALEELDDVDSVEHNMS 301          
BLAST of mRNA_P-fluviatile_contig10.689.1 vs. uniprot
Match: A0A7S4LII5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LII5_9EUGL)

HSP 1 Score: 211 bits (538), Expect = 1.040e-61
Identity = 121/239 (50.63%), Postives = 160/239 (66.95%), Query Frame = 1
Query:  205 MMGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNEDTNKQLADTLKEAKANSVPKDNIARAIKRAVDGSQGDFKEVVYEAYGHGGTGMVVTALTDNVNRAIADVKAVWKKHGLKQAAAGSVLFQFDKRGRVVIEGAVDEEQVIEAAIEAGIDEVEVVEGDEEGTSWILTTPTDLMTLAGALEKAGIT-GETGLALIPSGLAEVDDEAMELNLAAVEALLELEDVDSVDHNMA 918
            + GRR+AKIA  KGR DAK+ K +AR GKKIIMAVKAGGP+E  N  L D +KEAK  +VP  NI RAIKR  +    DFKE ++EAYG GG G+++T L+DN NRA ++VK+   K GL  A+ GSV F F++ G +V E  VDE+ V+EAA+EA +D+ EVV+GD+ G   +LT P     L  AL   G+  GE+ L   P+   E+ +E  E+N AA+E +  L+DVDS+ HNMA
Sbjct:  185 LYGRRSAKIAATKGRADAKKAKLYARYGKKIIMAVKAGGPDEGANTTLRDVIKEAKDANVPIANIDRAIKRGSENDAADFKESLFEAYGKGGAGLMITVLSDNANRASSEVKSAINKSGLTVASPGSVAFNFERMGAIVCEEEVDEDLVLEAAMEADVDDAEVVQGDD-GEWLVLTDPKQTTQLKAALMAQGVKCGESALIYHPNNYVELSEEDAEINDAAIERIEALDDVDSIAHNMA 422          
BLAST of mRNA_P-fluviatile_contig10.689.1 vs. uniprot
Match: A0A4D9CWY6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWY6_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.650e-60
Identity = 109/240 (45.42%), Postives = 161/240 (67.08%), Query Frame = 1
Query:  202 VMMGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNEDTNKQLADTLKEAKANSVPKDNIARAIKRAVDGSQGDFKEVVYEAYGHGGTGMVVTALTDNVNRAIADVKAVWKKHGLKQAAAGSVLFQFDKRGRVVIEGAVDEEQVIEAAIEAGIDEVEVVEGDEEGTSWILTTPTDLMTLAGALEKAGITGETGLAL-IPSGLAEVDDEAMELNLAAVEALLELEDVDSVDHNMA 918
            + MGRRAAK A  KG+ DA + K +A  GKK++MAVKAGGP+ + N+ LA  ++EAKA  VP DN+ RAI+R  + ++ D+KE VYEAYG+GG G+++  LTDN NRA  ++  V KK  +K A +GSV F FD++GR+ + G V+E+ V+EAA+EA +++V+    +EEG + +L  P  + +L       G   +  L + +P  L +  DE  E N++ +EAL EL+DVDSV+HN+A
Sbjct:    4 LFMGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVA 243          
BLAST of mRNA_P-fluviatile_contig10.689.1 vs. uniprot
Match: B8C5V4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5V4_THAPS)

HSP 1 Score: 202 bits (515), Expect = 1.710e-60
Identity = 117/240 (48.75%), Postives = 157/240 (65.42%), Query Frame = 1
Query:  208 MGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNED-TNKQLADTLKEAKANSVPKDNIARAIKRAVDGSQGDFKEVVYEAYGHGGTGMVVTALTDNVNRAIADVKAVWKKHGLKQAAAGSVLFQFDKRGRVVIEGAVDEEQVIEAAIEAGIDEVEVVEGDEEGTSWILTTPTDLMTLAGALEKAGIT--GETGLALIPSGLAEVDDEAMELNLAAVEALLELEDVDSVDHNMA 918
            MGR AA  A  KG+ DAK+ K  A  GKKIIMAVK GG  +   N+QL + +K AK NSVP DNI RAIKRA +   GDF E  +EAYG GG  +++  L+DN NR+ ADVK    K   K A  GSVLF +D +G++ I   VDEE+++ AAI+AG++++E+VEGDEEGTS + T P +   +  A++  G+    + GLA I     E  +E  + N+A +EAL EL+DVDSV+HNM+
Sbjct:    1 MGRAAAVRAATKGKTDAKKAKVNAYYGKKIIMAVKQGGSADPIANRQLGELIKAAKQNSVPVDNINRAIKRATEKDAGDFSEATFEAYGFGGASLIINVLSDNSNRSTADVKTAVNKLKGKMAEQGSVLFMYDLKGKIEIPAVVDEEELLMAAIDAGVEDMELVEGDEEGTSIVYTDPKETSAMFDAVKAIGLEEGSKMGLAHISKAPVECTEEDFDKNMAIIEALEELDDVDSVEHNMS 240          
BLAST of mRNA_P-fluviatile_contig10.689.1 vs. uniprot
Match: A0A7S0ATJ5_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ATJ5_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.790e-60
Identity = 118/241 (48.96%), Postives = 156/241 (64.73%), Query Frame = 1
Query:  205 MMGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNE-DTNKQLADTLKEAKANSVPKDNIARAIKRAVDGSQGDFKEVVYEAYGHGGTGMVVTALTDNVNRAIADVKAVWKKHGLKQAAAGSVLFQFDKRGRVVIEGAVDEEQVIEAAIEAGIDEVEVVEGDEEGTSWILTTPTDLMTLAGALEKAGITGET--GLALIPSGLAEVDDEAMELNLAAVEALLELEDVDSVDHNMA 918
            + GR AA  A  KG+ DAK+ K  A  GKKIIMAVK GG  + + N+ LA+ +K AKANSVP DNI RAIKRA +    +F E  +EAYG GG  MV+  L+DN NR  ADVK+   K G K A  GSVLF +D++G+V I   VDEE+++ AAI+AG D++E+VEGDEEGTS + T P +  ++  A++  G       GL  +     E  DE  E N+  ++AL EL+DVDSV+HNM+
Sbjct:   47 LFGRAAAVRAATKGKTDAKKAKTNALFGKKIIMAVKQGGSTDTNANRALAEVIKAAKANSVPVDNINRAIKRASETDTANFSESTFEAYGFGGASMVINCLSDNANRCTADVKSTVNKRGGKIAEQGSVLFMYDRKGKVEIPAVVDEEELLMAAIDAGCDDMELVEGDEEGTSVVYTDPKETNSMVDAVKAIGFEENVKMGLVYVTKAPVECTDEEFEKNMDIIDALEELDDVDSVEHNMS 287          
BLAST of mRNA_P-fluviatile_contig10.689.1 vs. uniprot
Match: K8ZBS2_NANGC (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8ZBS2_NANGC)

HSP 1 Score: 205 bits (521), Expect = 2.090e-60
Identity = 114/253 (45.06%), Postives = 168/253 (66.40%), Query Frame = 1
Query:  166 LRRPA-RGNGRDMVMMGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNEDTNKQLADTLKEAKANSVPKDNIARAIKRAVDGSQGDFKEVVYEAYGHGGTGMVVTALTDNVNRAIADVKAVWKKHGLKQAAAGSVLFQFDKRGRVVIEGAVDEEQVIEAAIEAGIDEVEVVEGDEEGTSWILTTPTDLMTLAGALEKAGITGETGLAL-IPSGLAEVDDEAMELNLAAVEALLELEDVDSVDHNMA 918
            LR+P  R N  + + MGRRAAK A  KG+ DA + K +A  GKK++MAVKAGGP+ + N+ LA  ++EAKA  VP DN+ RAI+R  + ++ D+KE VYEAYG+GG G+++  LTDN NRA  ++  V KK  +K A +GSV F FD++GR+ + G V+E+ V+EAA+EA +++V+    +EEG + +L  P  + +L       G   +  L + +P  L +  DE  E N++ +EAL EL+DVDSV+HN+A
Sbjct:   57 LRQPQPRCNRLNRLFMGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVA 309          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig10.689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTS7_ECTSI5.400e-15579.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C9R2_9STRA1.830e-9658.68Transcriptional regulator TACO1-like protein n=1 T... [more]
A0A6S9GJB7_HETAK8.560e-7453.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1TSS5_9STRA1.060e-6852.46Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2EDJ1_TRICV6.070e-6249.59Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A7S4LII5_9EUGL1.040e-6150.63Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A4D9CWY6_9STRA1.650e-6045.42Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
B8C5V4_THAPS1.710e-6048.75Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S0ATJ5_9STRA1.790e-6048.96Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
K8ZBS2_NANGC2.090e-6045.06Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig10contigP-fluviatile_contig10:1159871..1164280 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score448.0
Seed ortholog evalue3.6e-123
Seed eggNOG ortholog2880.D8LTS7
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006417,GO:0008150,GO:0009507,GO:0009536,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0034248,GO:0034250,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0070129,GO:0070131,GO:0080090,GO:2000112
EggNOG free text desc.regulation of translation
EggNOG OGsCOG0217@1,KOG2972@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionIntegrase, N-terminal zinc-binding domain-like
Ec32 orthologEc-28_002960.1
Exons6
Model size996
Cds size903
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig10.689.1prot_P-fluviatile_contig10.689.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig10 1159889..1164205 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815376.1163933-UTR-P-fluviatile_contig10:1159870..11598881622815376.1163933-UTR-P-fluviatile_contig10:1159870..1159888Porterinema fluviatile SAG_2381UTRP-fluviatile_contig10 1159871..1159888 +
1693561644.7763877-UTR-P-fluviatile_contig10:1159870..11598881693561644.7763877-UTR-P-fluviatile_contig10:1159870..1159888Porterinema fluviatile SAG_2381UTRP-fluviatile_contig10 1159871..1159888 +
1622815376.1963058-UTR-P-fluviatile_contig10:1164205..11642801622815376.1963058-UTR-P-fluviatile_contig10:1164205..1164280Porterinema fluviatile SAG_2381UTRP-fluviatile_contig10 1164206..1164280 +
1693561645.7536702-UTR-P-fluviatile_contig10:1164205..11642801693561645.7536702-UTR-P-fluviatile_contig10:1164205..1164280Porterinema fluviatile SAG_2381UTRP-fluviatile_contig10 1164206..1164280 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815376.125834-CDS-P-fluviatile_contig10:1159888..11600551622815376.125834-CDS-P-fluviatile_contig10:1159888..1160055Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 1159889..1160055 +
1693561645.6805649-CDS-P-fluviatile_contig10:1159888..11600551693561645.6805649-CDS-P-fluviatile_contig10:1159888..1160055Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 1159889..1160055 +
1622815376.1368213-CDS-P-fluviatile_contig10:1161312..11614301622815376.1368213-CDS-P-fluviatile_contig10:1161312..1161430Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 1161313..1161430 +
1693561645.7045145-CDS-P-fluviatile_contig10:1161312..11614301693561645.7045145-CDS-P-fluviatile_contig10:1161312..1161430Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 1161313..1161430 +
1622815376.1460757-CDS-P-fluviatile_contig10:1161900..11620591622815376.1460757-CDS-P-fluviatile_contig10:1161900..1162059Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 1161901..1162059 +
1693561645.714959-CDS-P-fluviatile_contig10:1161900..11620591693561645.714959-CDS-P-fluviatile_contig10:1161900..1162059Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 1161901..1162059 +
1622815376.156077-CDS-P-fluviatile_contig10:1162716..11629021622815376.156077-CDS-P-fluviatile_contig10:1162716..1162902Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 1162717..1162902 +
1693561645.7247293-CDS-P-fluviatile_contig10:1162716..11629021693561645.7247293-CDS-P-fluviatile_contig10:1162716..1162902Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 1162717..1162902 +
1622815376.1766238-CDS-P-fluviatile_contig10:1163491..11636031622815376.1766238-CDS-P-fluviatile_contig10:1163491..1163603Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 1163492..1163603 +
1693561645.7328913-CDS-P-fluviatile_contig10:1163491..11636031693561645.7328913-CDS-P-fluviatile_contig10:1163491..1163603Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 1163492..1163603 +
1622815376.1868296-CDS-P-fluviatile_contig10:1164044..11642051622815376.1868296-CDS-P-fluviatile_contig10:1164044..1164205Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 1164045..1164205 +
1693561645.7412179-CDS-P-fluviatile_contig10:1164044..11642051693561645.7412179-CDS-P-fluviatile_contig10:1164044..1164205Porterinema fluviatile SAG_2381CDSP-fluviatile_contig10 1164045..1164205 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig10.689.1

>prot_P-fluviatile_contig10.689.1 ID=prot_P-fluviatile_contig10.689.1|Name=mRNA_P-fluviatile_contig10.689.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=301bp
MAPMTRRSRCLGCTLLAAALSTVSSFIAPVVTQQGVFAGQHVSTKPQHVL
RRPARGNGRDMVMMGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAG
GPNEDTNKQLADTLKEAKANSVPKDNIARAIKRAVDGSQGDFKEVVYEAY
GHGGTGMVVTALTDNVNRAIADVKAVWKKHGLKQAAAGSVLFQFDKRGRV
VIEGAVDEEQVIEAAIEAGIDEVEVVEGDEEGTSWILTTPTDLMTLAGAL
EKAGITGETGLALIPSGLAEVDDEAMELNLAAVEALLELEDVDSVDHNMA
*
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mRNA from alignment at P-fluviatile_contig10:1159871..1164280+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig10.689.1 ID=mRNA_P-fluviatile_contig10.689.1|Name=mRNA_P-fluviatile_contig10.689.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4410bp|location=Sequence derived from alignment at P-fluviatile_contig10:1159871..1164280+ (Porterinema fluviatile SAG_2381)
CGCGACGCTGGCACCCCCATGGCTCCGATGACCAGACGTTCCCGCTGCTT GGGCTGCACTCTTCTTGCTGCCGCGCTGTCCACTGTGTCTTCTTTTATCG CTCCAGTCGTCACTCAGCAGGGAGTTTTTGCAGGCCAACATGTGTCGACG AAGCCACAGCATGTTCTCCGACGGCCGGCTCGAGGGTGAGCGCTGTACGC GGCCGGGTACGGCGTGTTAAGGTCAAGTTCTTCTGGAGGTCGTACCTCTC ATGTGTTTGTGCGTCGGTTGGCCGCTACCATGTACTACTTGTGTCCATGT AGCGTACTCTTCGCAGCCATTACACATGTTTGATGGTGCAAGTTACACCA ACACATACACATGTTTGATGGTGCAAGTTACACCAACACATAGACTAGTG TAGTCTGTAGTCTACTTGTAGCTGCCGTCGCACGAATACCATCTACACGC CACTATCGATTTTTTTGCCTCTGTGTGTGCGGCTCCCCTAGCTCGCATTA TGTAGTGTTGGGAGTATGGATGTTGCGGGCTCACTCGGCCGCACTTTCAG CCACCGCCACTTTTGACCCAGTGCGGAGAGCGTCGATGTCGCTGGCGATC GACTGCGGCTATTTTTCAAAATCACCTGTGTGCTGTATCCCGAGCGCCTT CGAATAACCTGGTGTTGCAGGGTCCACGTGGGATGGGCACCCTCCTCTGA CGAGTTGTCAATCGTCAGAGAGAACTCAAAGATACTACAAGTCGCATTCA AAAGGATATTAATCCGAGTATTAATAGCACTGGGCAGAGCTCCCCGTTAA ATGCTGCCAAACTGTCGTAGGCACTGCTAGTCGGTTGCGCTCGCACGCCG TCGGGACAGCACTCGTCGGAACAGGACCCGAAGTACGTGTTCATCGCCAG TGACTGTCGGCTCCCACCTATCTCTCGCATAGTTTTGCTCCCCTTCGTCT CCAACTCGCCCGAAAACATAAGGATCATGCAGGATTTGGTCATAGGTTGG AACAGCAACCCTCAACACCCGCAGGAGTGTGGAAGTACTCACGCCGAAAC CAAAATTGTCTATCACAGCGATCTCACCCCTCCCCCGCCGGTTTCTTGTT TTGGTGCCTGCTCAATTGACTTGTTCATGGGCTACTGGTGTTCGTGCACA TTATTCTGTCCCGGGGCGCATGTGTCCCAGTTGGTGCGGACATGGGCGCT TAGCTCTGGACATGTGACAGGGCAAACAACAACGGCAACGAGTTGGCGAC TACCACGAAGGTGTAAAAACCACGAACACCATCTCAGGAACGATATCAAG AAGAACAAGCAACATGACCAACAGCATGCCAACAACAACATGCCATTGCG CCAAATTTCCGACCTAAATCCCCAGTCCCCCCACACCCTCACCTTGCCCG CGCGCTCCCTGCCTTATTCGGTGTTGCTCGATGGAATCAAAGGAATGGCC GAGACATGGTGATGATGGGACGACGTGCTGCGAAGATCGCTAAGGTCAAA GGAAGGGAAGACGCCAAGCGCGGGAAGGCGTTTGCCCGAATCGGGAAAAA GATAATCATGGTACGTGAATTTTTTGTTAACATCTGATTTGTTGGAATTG CTTCAAGCGGCGGAGCTGCTTCACGGACAGCAGACGGTCGAGGTACATGG GCTCTTTTGGCACTCGCGAAATTGCTGTACATTTGACACTCCCCAAATCT ATGTAAGGTGCTCTGAACACGTGAACATATGTTATGCTCGTTGGAATTCT CTCGTAGCCAGTGTGTCACCACACGTTTGTTCCAGCTTCCGCTCCGTAGT ATTCTGCACCGAGGCCTCTCGTCCCGCTTGCTGTACGACGAGTGGAGTTC GCCCCGCGTTTTTTTTTATTTTGTCGTATGATTTTTTGCCATCCCGCCGC CCTTGTACGTGTAAAATAGAGAAAACATGAAGGTCTGGCGACGCCCTTGC CATCAGGAGAGCTGCTGTGGATGCAGAGCTAAACGGTCGGGCCAACAAGC TTTCGTTTTGTCGTGTTGCTTCTTGTTCAGGCCGTGAAAGCCGGGGGGCC GAACGAGGACACGAACAAGCAGCTGGCCGACACCTTGAAGGAGGCGAAGG CAAACAGTGTCCCCAAGGACAACATCGCGCGAGCCATCAAGCGAGCAGTA GACGGGTCTCAGGGTGACTTCAAGGAGGTTGTATACGAGGTGAGGACAAA CTAGTCTCGCTGGCTTTCCTGAAGATCGCCAGGTCTTTGTTTCATTGGCA CCCAGCGAGCCCGTTCGTGTGCGAAATTCTTCCCGCTCCTGGTTATCAAC CAGAACGGGATCTCCCACCACAAAGGGCGAGTCCCTTGGTGCTATGGAGG TGACGGGTCACAGGCGGCGTGCATTTCTCTAGTGTTGTTCAGCAGTTGTC GCACCCGCCTGATCCGGCTTTCCCGGATGTCACCCGGTCGATGCTTCCCA CCGAAATCCTTGCTTTTATCGTCGCTTCTTGCTTGATACCCCCCACCCCC GTTCCTGCCTTCGCTTGGCTTCAGCACTGTTCGTCTCTTGTGGCTTGGCT GTTTCTTGGAGCGGACAGTGCGACGGCCACCTTCTACATTGTCTTGTTTT GTTTTCTTGCGGCATGTATGAAATTTTGTCAGATCTCGGAAACTCTTTGT CCATTTGCACCGGCGGCAGGGTTTTTGTTTGTCCTTCGTTGTGTGAGTTA CTCTTTGTTCGTTCAGGCCGATGGTGCGGCGGCCGCCCTTTTATCGTGCC TCGCTTGATTTTGAATCCAATTGGCCCGGCGTCCCGGCAGTCACTCTTTT TTGTCCAATCTTCATTGATCATTTGTTTGGGACGGCTTTACGGCAGGCGT ACGGCCACGGCGGAACGGGCATGGTGGTGACGGCCTTGACCGACAACGTG AACCGGGCCATCGCGGACGTGAAGGCGGTGTGGAAGAAGCACGGGCTCAA GCAGGCCGCCGCGGGGTCAGTCCTGTTCCAGTTCGACAAGAGGGGGAGGG TCGTTATCGAAGGCGCGGTCGACGAGGAGCAGGTGCGAAACGACTGCAGA AAATATGAACATCAAACGTGAATATTTTTGCCATCTGCCTGGGGGCTTGA CGGGCACGAAGAGCTAGTTTCAAGAGCAATACTTGTTGTCTTTTACGTCT TGCGGAGGACAGCAGTGGAGAGTGTGCCGAAATTTTGTTGTTAATTCGGC GCTATTCTTAGGTCAGGCACGTTCTTGTTGCTCGCGAGTAGGGGTGCTTC AGTACGTTGGCGACCAGGAGCTGAAGACTCCATGTAAACATGAGATGTTG TTACCCCGGAGTGCTCGGAGTATTTGTTTTCTGCAGCGAGAGCAGATAGA TGGCCCAGTGCAACTCGACATCGCCCGACTGCCTCTTCCTGTGCAAGGTT GCGGCAGCATTATCGTAGTAATTGGAAGACGACTCTTTCTCTCTCTCTCT CTCCTTGTATGCACATTTATATTTCGCAGATTGAATCGTCCACAGTCCAT AGCCTCTGGATCGGCTCTGTAAGTGTGTGTTATCGTTTCTCCTCTCTTGT ATTTTCTCATACCCCCTTCTGCTATGCCTCCGGCCGCGCGCGCTACTGCT GCTGCTCTTGTGCAAGCACAGGTGATCGAGGCGGCGATCGAGGCGGGCAT CGACGAGGTGGAAGTTGTGGAAGGAGACGAAGAAGGCACGTCTTGGATAC TCACCACACCCACGGACCTCATGACACTAGCAGGTTCGGGTTGTTGTTCG TAGTCTTTGTGGTTGTTGCCGCTGCTGCCGCTGTGGTAGCCGTGGTTGTT GTTGCTGTTTGTGGTTTTGTTTATGTCGTTGTCGACGTCGTCGCTGTTGG CGGTGTTGGTTATGTTTTCGGTTGTGTTATTTTTGTTGAAGTCGTTGAAG TCGTTGGCGGCAATGGTGGTGGGGGTGACGGTTGCGCTGTTGGCGGTGCA TTTCGAGGGGAACGTGATTGTGCTCTTTGTGGGCAGGAATGGGCGTTGCT ACCAGCCCGGGCTCGTCCTGGCTTCCTCGTTGCACCTGTTGTGATGGTGT TGGGCTTGGCGTCAGCATTTGAACCGCCACGGATTCGATCCTCAAAAAAA AATCAGGCTTCTCTTCTGACTGCGAACCTCCCCGCGCCTTGATCCACATT TTCAATCACTCATGCATCAACCAGGTGCCTTAGAAAAGGCTGGCATCACG GGCGAAACCGGCCTTGCACTCATACCATCAGGGTTGGCCGAGGTCGACGA TGAAGCCATGGAGCTCAATTTGGCGGCAGTAGAGGCGCTGTTGGAGCTTG AAGACGTCGACTCGGTCGACCACAACATGGCATGAAAATCGATGAAATGC TGGCCTGCTCGTGCGTAGTTCCCCCCCCCACCCCCATTTTTCGTCGGAAA TATCACATAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig10:1159871..1164280+

>mRNA_P-fluviatile_contig10.689.1 ID=mRNA_P-fluviatile_contig10.689.1|Name=mRNA_P-fluviatile_contig10.689.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1806bp|location=Sequence derived from alignment at P-fluviatile_contig10:1159871..1164280+ (Porterinema fluviatile SAG_2381)
ATGGCTCCGATGACCAGACGTTCCCGCTGCTTGGGCTGCACTCTTCTTGC
TGCCGCGCTGTCCACTGTGTCTTCTTTTATCGCTCCAGTCGTCACTCAGC
AGGGAGTTTTTGCAGGCCAACATGTGTCGACGAAGCCACAGCATGTTCTC
CGACGGCCGGCTCGAGGATGGCTCCGATGACCAGACGTTCCCGCTGCTTG
GGCTGCACTCTTCTTGCTGCCGCGCTGTCCACTGTGTCTTCTTTTATCGC
TCCAGTCGTCACTCAGCAGGGAGTTTTTGCAGGCCAACATGTGTCGACGA
AGCCACAGCATGTTCTCCGACGGCCGGCTCGAGGGAATGGCCGAGACATG
GTGATGATGGGACGACGTGCTGCGAAGATCGCTAAGGTCAAAGGAAGGGA
AGACGCCAAGCGCGGGAAGGCGTTTGCCCGAATCGGGAAAAAGATAATCA
TGGAATGGCCGAGACATGGTGATGATGGGACGACGTGCTGCGAAGATCGC
TAAGGTCAAAGGAAGGGAAGACGCCAAGCGCGGGAAGGCGTTTGCCCGAA
TCGGGAAAAAGATAATCATGGCCGTGAAAGCCGGGGGGCCGAACGAGGAC
ACGAACAAGCAGCTGGCCGACACCTTGAAGGAGGCGAAGGCAAACAGTGT
CCCCAAGGACAACATCGCGCGAGCCATCAAGCGAGCAGTAGACGGGTCTC
AGGGTGACTTCAAGGAGGTTGTATACGAGGCCGTGAAAGCCGGGGGGCCG
AACGAGGACACGAACAAGCAGCTGGCCGACACCTTGAAGGAGGCGAAGGC
AAACAGTGTCCCCAAGGACAACATCGCGCGAGCCATCAAGCGAGCAGTAG
ACGGGTCTCAGGGTGACTTCAAGGAGGTTGTATACGAGGCGTACGGCCAC
GGCGGAACGGGCATGGTGGTGACGGCCTTGACCGACAACGTGAACCGGGC
CATCGCGGACGTGAAGGCGGTGTGGAAGAAGCACGGGCTCAAGCAGGCCG
CCGCGGGGTCAGTCCTGTTCCAGTTCGACAAGAGGGGGAGGGTCGTTATC
GAAGGCGCGGTCGACGAGGAGCAGGCGTACGGCCACGGCGGAACGGGCAT
GGTGGTGACGGCCTTGACCGACAACGTGAACCGGGCCATCGCGGACGTGA
AGGCGGTGTGGAAGAAGCACGGGCTCAAGCAGGCCGCCGCGGGGTCAGTC
CTGTTCCAGTTCGACAAGAGGGGGAGGGTCGTTATCGAAGGCGCGGTCGA
CGAGGAGCAGGTGATCGAGGCGGCGATCGAGGCGGGCATCGACGAGGTGG
AAGTTGTGGAAGGAGACGAAGAAGGCACGTCTTGGATACTCACCACACCC
ACGGACCTCATGACACTAGCAGGTGATCGAGGCGGCGATCGAGGCGGGCA
TCGACGAGGTGGAAGTTGTGGAAGGAGACGAAGAAGGCACGTCTTGGATA
CTCACCACACCCACGGACCTCATGACACTAGCAGGTGCCTTAGAAAAGGC
TGGCATCACGGGCGAAACCGGCCTTGCACTCATACCATCAGGGTTGGCCG
AGGTCGACGATGAAGCCATGGAGCTCAATTTGGCGGCAGTAGAGGCGCTG
TTGGAGCTTGAAGACGTCGACTCGGTCGACCACAACATGGCATGAGTGCC
TTAGAAAAGGCTGGCATCACGGGCGAAACCGGCCTTGCACTCATACCATC
AGGGTTGGCCGAGGTCGACGATGAAGCCATGGAGCTCAATTTGGCGGCAG
TAGAGGCGCTGTTGGAGCTTGAAGACGTCGACTCGGTCGACCACAACATG
GCATGA
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